Prupe.4G198500_v2.0.a1

(-)-alpha-pinene synthase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000053
Physical Location & Seq
Forward (+)
12184503 .. 12187209
2707 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G198500.2

Sequence Viewer

Length: 1566 bp
ATGAAGGAAGTTGAGTCATTAGTTCCATCCCGACGGACAGCAAATTACCACCTGAGCATTTGGGGGGATCAGTTTATGAATTATGATTCAGAAGACATTATAACTTATGCCCATAAGCAACAAGAAGTTGAAGAATTGAAACTAGCAGTGAGGAGGGAAGTGTTCACAACCAGTGCAGATGATTTTTCAAATCAGATGAAGCTAATTGATGCAATCCAGCGCCTAGGTGTGGCGTACCACTTTGAAAAGGAAATAGAAGAAGCACTGGAACATATATATGCTGCAAATCATTTCCATGATGATGATGATGGTGATGGTGATCTATACAGTGTTTCTCTTGGTTTTCGGCTACTAAGACATCATGGACACAATGTTTCATCAGGAATATTCAACAAGTTCAGAGATAGTAAAAATGGAGGCTTCAAGAAAAGCTTAATCGCTGATGTGTCGGGATTGCTAAGCTTTTATGAAGCTACGCATCTGAGGGTGCACGGAGAAGATATACTAGAAGAGGCTCTTGTTTTCACGACAAAACATCTGGAGTCGGCAACAACCCATGTAAGCTATCAACTAGCAGAACAAATAGCTCAAGCCCTAGAGAGACCGCTCCGAAAGAGTCTCGTGAGGTTATGCGCCCGTCGGTTCATGTCCATCTACCAAGATGAAGCTTCACATAATGAAGCTCTATTAAAACTTGCCAAGTCAGATTTCAATCTTGTTCAGTCTTTGCACAAACAAGAGCTCAGTGAGATTACTAGGTGGTGGAAAGAACTAGACTTTGAAAGGAAGCTGCCTTTTGCAAGAAACAGAATTGTGGAGTTATACTGCTGGATTTTTGGGGTCTATGTTGAGCCCCAATACCTTGTTGGAAGAAAATTTCTCACAAAAATTATTGCCTTGATTTCTGTAATGGATGATATCTATGATGCATTCGGTACATTTGAAGAACTTGAGATCTTTACCGAAGCAATTCATCAAAGATGGCATGCCAGTTGCATGGAAGGACTGCCAGAGTACAAGCAAATATTCTTCCATACGCTTTTGAATGTTTTCAATGAAATTGAGGAGGAGATGGTGAAGGAAGGAAGAGCATACCGAGCTCACTATGCAAAAGAAGCTTGGAAAACTATTACCAAAGCTTACTTTGATGAGGCCAAATGGTTCCACGAAGGATGCATCCCAAGCATGGAGGAGTATATGTGTGTTGCTGCAACTTCTGCTGCTAGCTTCGCACTTTCAACTACATCTTTAGTTGGCATGGGAGATATTTTTGAAAAAGAGAGGGGCTATGTTGCTTGTGCTATTGATTGTTACATGAAGCAATATGGGGTCTCAGATGAGCAAGAGATAATTGATGTCTTCAACAAAAAAATTGTGGATTCGTGGAAAGATATCAACGAGGAGTTCCTTAGACCAACTTCTATGCCGATGCGTATCCTTGAACGTATTGTTAATTTAACTAGAGTGGTGGATCTCCTCTACAAAAAATATGATGCATACACACATGGTGGAAAAGTGATGAACGATTGCATCGCTTCGTATTTGATTGATCCAGCACTAGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

522

Amino Acids

60.49

Weight (kDa)

5.4

Isoelectric Point (pI)

47.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 101
AccBSI CCGCTC 1 cut(s) 607
AciI CCGC 1 cut(s) 605
AclWI GGATC 3 cut(s) 75, 1479, 1544
AcsI RAATTY 1 cut(s) 875
AdeI CACNNNGTG 1 cut(s) 1508
AfaI GTAC 3 cut(s) 236, 937, 1016
AfiI CCNNNNNNNGG 2 cut(s) 229, 1186
AhlI ACTAGT 1 cut(s) 1558
AjuI GAANNNNNNNTTGG 2 cut(s) 692, 724
Alw21I GWGCWC 3 cut(s) 492, 744, 1102
Alw26I GTCTC 3 cut(s) 595, 623, 1336
Alw44I GTGCAC 1 cut(s) 488
AlwI GGATC 3 cut(s) 75, 1479, 1544
AoxI GGCC 1 cut(s) 1152
ApaLI GTGCAC 1 cut(s) 488
ApeKI GCWGC 4 cut(s) 281, 790, 1208, 1220
ApoI RAATTY 1 cut(s) 875
Asp700I GAANNNNTTC 2 cut(s) 969, 1049
AspA2I CCTAGG 1 cut(s) 223
AspLEI GCGC 2 cut(s) 222, 635
AsuHPI GGTGA 3 cut(s) 323, 329, 1087
AsuNHI GCTAGC 1 cut(s) 1223
AvrII CCTAGG 1 cut(s) 223
BaeGI GKGCMC 1 cut(s) 492
BanII GRGCYC 3 cut(s) 744, 855, 1102
BauI CACGAG 1 cut(s) 620
BbsI GAAGAC 2 cut(s) 99, 1351
Bbv12I GWGCWC 3 cut(s) 492, 744, 1102
BbvI GCAGC 4 cut(s) 268, 777, 1195, 1207
BccI CCATC 6 cut(s) 34, 302, 308, 659, 975, 1066
BciVI GTATCC 1 cut(s) 1445
BcoDI GTCTC 3 cut(s) 595, 623, 1336
BcuI ACTAGT 1 cut(s) 1558
BfoI RGCGCY 1 cut(s) 223
BfuI GTATCC 1 cut(s) 1445
BglII AGATCT 1 cut(s) 954
BisI GCNGC 4 cut(s) 282, 791, 1209, 1221
BlnI CCTAGG 1 cut(s) 223
BlpI GCTNAGC 1 cut(s) 458
BlsI GCNGC 4 cut(s) 283, 792, 1210, 1222
BmiI GGNNCC 1 cut(s) 1163
BmsI GCATC 8 cut(s) 199, 487, 916, 1163, 1185, 1419, 1483, 1539
BmtI GCTAGC 1 cut(s) 1227
BpiI GAAGAC 2 cut(s) 99, 1351
BpmI CTGGAG 1 cut(s) 560
Bpu10I CCTNAGC 1 cut(s) 53
Bpu1102I GCTNAGC 1 cut(s) 458
BpuEI CTTGAG 2 cut(s) 573, 971
BsaBI GATNNNNATC 3 cut(s) 318, 711, 1433
BsaI GGTCTC 2 cut(s) 595, 1336
BsaJI CCNNGG 1 cut(s) 223
BsaXI ACNNNNNCTCC 2 cut(s) 1184, 1214
Bsc4I CCNNNNNNNGG 2 cut(s) 229, 1186
Bse1I ACTGG 3 cut(s) 171, 270, 990
Bse8I GATNNNNATC 3 cut(s) 318, 711, 1433
BseDI CCNNGG 1 cut(s) 223
BseGI GGATG 4 cut(s) 26, 919, 1176, 1178
BseJI GATNNNNATC 3 cut(s) 318, 711, 1433
BseLI CCNNNNNNNGG 2 cut(s) 229, 1186
BseMII CTCAG 4 cut(s) 44, 473, 757, 1347
BseNI ACTGG 3 cut(s) 171, 270, 990
BseRI GAGGAG 6 cut(s) 166, 1079, 1082, 1205, 1415, 1466
BseSI GKGCMC 1 cut(s) 492
BseXI GCAGC 4 cut(s) 268, 777, 1195, 1207
BsgI GTGCAG 1 cut(s) 195
BshFI GGCC 1 cut(s) 1154
BsiHKAI GWGCWC 3 cut(s) 492, 744, 1102
BslI CCNNNNNNNGG 2 cut(s) 229, 1186
BsmAI GTCTC 3 cut(s) 595, 623, 1336
BsmI GAATGC 1 cut(s) 929
BsnI GGCC 1 cut(s) 1154
Bso31I GGTCTC 2 cut(s) 595, 1336
Bsp1286I GDGCHC 4 cut(s) 492, 744, 855, 1102
Bsp143I GATC 5 cut(s) 67, 319, 954, 1471, 1549
Bsp1720I GCTNAGC 1 cut(s) 458
BspACI CCGC 1 cut(s) 605
BspANI GGCC 1 cut(s) 1154
BspCNI CTCAG 4 cut(s) 45, 474, 756, 1346
BspLI GGNNCC 1 cut(s) 1163
BspOI GCTAGC 1 cut(s) 1227
BspPI GGATC 3 cut(s) 75, 1479, 1544
BspQI GCTCTTC 1 cut(s) 1081
BspTNI GGTCTC 2 cut(s) 595, 1336
BsrBI CCGCTC 1 cut(s) 607
BsrI ACTGG 3 cut(s) 171, 270, 990
BssECI CCNNGG 1 cut(s) 223
BssMI GATC 5 cut(s) 67, 319, 954, 1471, 1549
BssSI CACGAG 1 cut(s) 620
BssT1I CCWWGG 1 cut(s) 223
Bst2BI CACGAG 1 cut(s) 620
Bst4CI ACNGT 1 cut(s) 329
Bst6I CTCTTC 2 cut(s) 504, 1081
BstAPI GCANNNNNTGC 1 cut(s) 1217
BstC8I GCNNGC 2 cut(s) 987, 1225
BstDEI CTNAG 7 cut(s) 53, 353, 458, 482, 743, 1333, 1409
BstF5I GGATG 4 cut(s) 26, 919, 1176, 1178
BstH2I RGCGCY 1 cut(s) 223
BstHHI GCGC 2 cut(s) 222, 635
BstKTI GATC 5 cut(s) 70, 322, 957, 1474, 1552
BstMAI GTCTC 3 cut(s) 595, 623, 1336
BstMBI GATC 5 cut(s) 67, 319, 954, 1471, 1549
BstMWI GCNNNNNNNGC 6 cut(s) 1097, 1106, 1115, 1182, 1217, 1229
BstNSI RCATGY 1 cut(s) 989
BstSLI GKGCMC 1 cut(s) 492
BstV1I GCAGC 4 cut(s) 268, 777, 1195, 1207
BstV2I GAAGAC 2 cut(s) 99, 1351
BstX2I RGATCY 2 cut(s) 954, 1471
BstXI CCANNNNNNTGG 1 cut(s) 997
BstYI RGATCY 2 cut(s) 954, 1471
BsuI GTATCC 1 cut(s) 1445
BsuRI GGCC 1 cut(s) 1154
BtgZI GCGATG 1 cut(s) 1516
BtsCI GGATG 4 cut(s) 26, 919, 1176, 1178
BtsI GCAGTG 1 cut(s) 153
BtsIMutI CAGTG 5 cut(s) 153, 178, 263, 334, 751
Cac8I GCNNGC 2 cut(s) 987, 1225
CfoI GCGC 2 cut(s) 222, 635
Csp6I GTAC 3 cut(s) 235, 936, 1015
CviQI GTAC 3 cut(s) 235, 936, 1015
DdeI CTNAG 7 cut(s) 53, 353, 458, 482, 743, 1333, 1409
DpnI GATC 5 cut(s) 69, 321, 956, 1473, 1551
DpnII GATC 5 cut(s) 67, 319, 954, 1471, 1549
DraIII CACNNNGTG 1 cut(s) 1508
Eam1104I CTCTTC 2 cut(s) 504, 1081
EarI CTCTTC 2 cut(s) 504, 1081
Ecl136II GAGCTC 2 cut(s) 742, 1100
Eco130I CCWWGG 1 cut(s) 223
Eco24I GRGCYC 3 cut(s) 744, 855, 1102
Eco31I GGTCTC 2 cut(s) 595, 1336
Eco32I GATATC 2 cut(s) 919, 1393
Eco53kI GAGCTC 2 cut(s) 742, 1100
EcoICRI GAGCTC 2 cut(s) 742, 1100
EcoRV GATATC 2 cut(s) 919, 1393
EcoT14I CCWWGG 1 cut(s) 223
EcoT22I ATGCAT 3 cut(s) 931, 1178, 1498
EcoT38I GRGCYC 3 cut(s) 744, 855, 1102
ErhI CCWWGG 1 cut(s) 223
FalI AAGNNNNNCTT 4 cut(s) 416, 448, 501, 533
Fnu4HI GCNGC 4 cut(s) 282, 791, 1209, 1221
FokI GGATG 4 cut(s) 13, 926, 1163, 1185
FriOI GRGCYC 3 cut(s) 744, 855, 1102
Fsp4HI GCNGC 4 cut(s) 282, 791, 1209, 1221
GlaI GCGC 2 cut(s) 221, 634
GluI GCNGC 4 cut(s) 282, 791, 1209, 1221
GsuI CTGGAG 1 cut(s) 560
HaeII RGCGCY 1 cut(s) 223
HaeIII GGCC 1 cut(s) 1154
HhaI GCGC 2 cut(s) 222, 635
Hin6I GCGC 2 cut(s) 220, 633
HinP1I GCGC 2 cut(s) 220, 633
HindIII AAGCTT 5 cut(s) 430, 460, 666, 1116, 1137
HinfI GANTC 5 cut(s) 14, 86, 542, 616, 1379
HphI GGTGA 3 cut(s) 323, 329, 1087
Hpy166II GTNNAC 2 cut(s) 165, 490
Hpy188I TCNGA 7 cut(s) 91, 195, 401, 483, 611, 706, 1336
Hpy188III TCNNGA 7 cut(s) 30, 381, 424, 450, 526, 539, 622
Hpy8I GTNNAC 2 cut(s) 165, 490
Hpy99I CGWCG 2 cut(s) 36, 642
HpyAV CCTTC 4 cut(s) 995, 1072, 1076, 1163
HpyCH4III ACNGT 1 cut(s) 329
HpyCH4IV ACGT 1 cut(s) 1444
HpyF10VI GCNNNNNNNGC 6 cut(s) 1097, 1106, 1115, 1182, 1217, 1229
HpyF3I CTNAG 7 cut(s) 53, 353, 458, 482, 743, 1333, 1409
HpySE526I ACGT 1 cut(s) 1444
HspAI GCGC 2 cut(s) 220, 633
Kzo9I GATC 5 cut(s) 67, 319, 954, 1471, 1549
LguI GCTCTTC 1 cut(s) 1081
LmnI GCTCC 1 cut(s) 612
LpnPI CCDG 9 cut(s) 65, 184, 230, 251, 366, 524, 814, 1003, 1023
Lsp1109I GCAGC 4 cut(s) 268, 777, 1195, 1207
LweI GCATC 8 cut(s) 199, 487, 916, 1163, 1185, 1419, 1483, 1539
MaeII ACGT 1 cut(s) 1444
MaeIII GTNAC 1 cut(s) 1310
MalI GATC 5 cut(s) 69, 321, 956, 1473, 1551
MbiI CCGCTC 1 cut(s) 607
MboI GATC 5 cut(s) 67, 319, 954, 1471, 1549
MflI RGATCY 2 cut(s) 954, 1471
MhlI GDGCHC 4 cut(s) 492, 744, 855, 1102
MlyI GAGTC 3 cut(s) 23, 551, 625
MmeI TCCRAC 1 cut(s) 847
Mph1103I ATGCAT 3 cut(s) 931, 1178, 1498
MroXI GAANNNNTTC 2 cut(s) 969, 1049
MseI TTAA 4 cut(s) 434, 689, 1452, 1457
MslI CAYNNNNRTG 4 cut(s) 276, 294, 300, 1561
Mva1269I GAATGC 1 cut(s) 929
MwoI GCNNNNNNNGC 6 cut(s) 1097, 1106, 1115, 1182, 1217, 1229
NdeII GATC 5 cut(s) 67, 319, 954, 1471, 1549
NheI GCTAGC 1 cut(s) 1223
NlaIV GGNNCC 1 cut(s) 1163
NsiI ATGCAT 3 cut(s) 931, 1178, 1498
NspI RCATGY 1 cut(s) 989
PaeI GCATGC 1 cut(s) 989
PciSI GCTCTTC 1 cut(s) 1081
PctI GAATGC 1 cut(s) 929
PdmI GAANNNNTTC 2 cut(s) 969, 1049
PfeI GAWTC 2 cut(s) 86, 1379
PkrI GCNGC 4 cut(s) 283, 792, 1210, 1222
PleI GAGTC 3 cut(s) 22, 550, 624
PpsI GAGTC 3 cut(s) 22, 550, 624
PsiI TTATAA 1 cut(s) 101
Psp124BI GAGCTC 2 cut(s) 744, 1102
PspN4I GGNNCC 1 cut(s) 1163
PsuI RGATCY 2 cut(s) 954, 1471
RsaI GTAC 3 cut(s) 236, 937, 1016
RsaNI GTAC 3 cut(s) 235, 936, 1015
RseI CAYNNNNRTG 4 cut(s) 276, 294, 300, 1561
SacI GAGCTC 2 cut(s) 744, 1102
SapI GCTCTTC 1 cut(s) 1081
SaqAI TTAA 4 cut(s) 434, 689, 1452, 1457
SatI GCNGC 4 cut(s) 282, 791, 1209, 1221
Sau3AI GATC 5 cut(s) 67, 319, 954, 1471, 1549
SchI GAGTC 3 cut(s) 23, 551, 625
SduI GDGCHC 4 cut(s) 492, 744, 855, 1102
SfaNI GCATC 8 cut(s) 199, 487, 916, 1163, 1185, 1419, 1483, 1539
SmiMI CAYNNNNRTG 4 cut(s) 276, 294, 300, 1561
SmlI CTYRAG 2 cut(s) 588, 950
SmoI CTYRAG 2 cut(s) 588, 950
SpeI ACTAGT 1 cut(s) 1558
SphI GCATGC 1 cut(s) 989
SsiI CCGC 1 cut(s) 605
SspI AATATT 2 cut(s) 387, 1026
SstI GAGCTC 2 cut(s) 744, 1102
StyI CCWWGG 1 cut(s) 223
TaaI ACNGT 1 cut(s) 329
TaiI ACGT 1 cut(s) 1447
TatI WGTACW 1 cut(s) 1014
TfiI GAWTC 2 cut(s) 86, 1379
Tru1I TTAA 4 cut(s) 434, 689, 1452, 1457
Tru9I TTAA 4 cut(s) 434, 689, 1452, 1457
TscAI CASTG 5 cut(s) 153, 178, 270, 334, 751
TseI GCWGC 4 cut(s) 281, 790, 1208, 1220
TspGWI ACGGA 2 cut(s) 49, 507
TspRI CASTG 5 cut(s) 153, 178, 270, 334, 751
VneI GTGCAC 1 cut(s) 488
XapI RAATTY 1 cut(s) 875
XceI RCATGY 1 cut(s) 989
XcmI CCANNNNNNNNNTGG 1 cut(s) 863
XmaJI CCTAGG 1 cut(s) 223
XmnI GAANNNNTTC 2 cut(s) 969, 1049
Zsp2I ATGCAT 3 cut(s) 931, 1178, 1498
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.