FvH4_3g10282

beta-galactosidase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
6000600 .. 6003047
2448 bp
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UTR
Exon/CDS
Intron
FvH4_3g10282.t1

Sequence Viewer

Length: 2448 bp
ATGGCTCGGTCTCTTCTGCTAAGTGCTAATATGCCAAAGTACCTTTGGGGAGAAGCTATTTTATGTGCTTCTCATCTTATTAACCGCCTTCCCTCTGCCCCTCTTCAAGGTCGTGTCCCACTTCAGGTCTTGTCTAACTATGTTTCTATCCCTTCAGCTAATACTCTTCCTGCTCGTGTTTTTGGTTGTGTTGCTTATGTTCATCTCTATAAAAATCAAAGGTCAAAATTGGATGCTAGAGCCCTTAAGTGTGTATTTGTTGGGTATGGCTCTCAGCAGAAAGGCTACAAATGTTATCATCCTCAGTCCCAAAGGTTTTATGTCACCATGGATGTTACTTTCAGTGAAGATGTATGTTATTTCCTGCCTCCTGTGACTCCTCGTCAGGGGGAGAGGTTTAGTTATTATGAAGATTTGTTTGTTGGACATAATGAGAGTGTGACACCAGAAGTCACAAGGGTGGAGTGTGTAGCGACAGAGCTTGAAAAGAACAACAAAATTTCACCAAATGGTCAGCCCAACTCTACAGATCAGTCATCCGAGATAGAAACAGAAAAAAGTGGAATCAGTGACACACCAGATCAATCTGAATGTCCGGTTAGAGAAGAATCTTTGGGCAGTGTTTTACCCAACGGTCAATTAGATCCAGAACAATCCGACCGATCGGCCAGGGAAGTGATTTCAGATCCTGAATCTGATGATGTGTTGCAGTCTTCTGGCGCTGTTTTAAATGGCTCTTCTGTCTCTCCCTCTTCTTCATCGGTCTCACCTGCTGAATCATCACCCGAGGTATGTCCTAATCCTTGTTTTTCTACTAGTTCTTCTGTGTCAAATAATGTTCCAACTAAAATCTTGCCTAGTCGTTCAACCCGTGGTCAGCCTCCAAAACGTTATGAACCTACTCTAAGTGATAAGGCTAAATATCCAATTGTTAATTATGTGTCTACCCACAGGTTGTCTAAACCATATGTAGCCTTTGTGAATCAATTATCTTCTGTGTCTCTTCCTAGTAAAGTGCAGGATGCTATGAAGGATGAGAAGTGGATGCAGGCAATGAAAGTTGAGATGGATGCTCTTGAGAAGAATCATACGTGGGAGTTAGTGTCATTGCCACCAGGGAAGAAGACAGTTGGTTGTCGGTGGGTGTATACGATGAAACATAATTCTGATGGTTCTGTGGACAGGTACAAGGAAAGGTTAGTAGCAAAAGGCTATACTCAGAAGTATGGGGTAGATTATGATGAGACTTTTGCACCTGTGGCTAAAATGAACACAATTCGGGTACTTCTTTCATTAGCAGCTAACCTTGATTGGCAACTGCAGCAGTTTGATGTTAAAAATGCATTCTTGCATGGTGATTTGCATGAAGAAGTTTATATGGATTTGCCTCCTGGGTACGATACTTCTACCGGAGAACAGTTGATGTGTAAGTTGCAGAAGTCTCTCTATGGTCTGAAGCAATCTCCCAGAGCTTGGTTTGGATGGTTTAGCAAGTTTATAAAAGAAATTGGATACCGTCAGAGCAACTCGGATCATACTTTGTTTCTTAAACATCGGTGTGGTAAGGTGACAGCCTTAATTATTTATGTAGACGATATGGTTGTGACAGGTGATGATAGTGAGGAGATACAAAGGTTACAATTGCAGTTGTCTTCTGAATTTGAGATGAAGGATTTGGGTAGTTTAAAGTACTTCTTGGGAATTGAAGTTGCTCGTGGAAAAAATTGCATTGTTTTGAGTCAACGAAAGTATGTTCTAGACTTGTTAGCAGAAACAGGTATGCTTGACTGCAAACCTGCTGATACTCCTATTGAGCAAAACCATCGGTTAGCAGAGTATTTAGATCAGTTTCCTACAAATAGAGCAAGATATCAGAGGTTAGTTGGTCGGTTGATTTATTTGTCTCACACTAGACCAGACCTAGCCTATGCAGTTAGTGTTGTCAGTCAATTCATGCATAATCCCAGTGAGACTCATATGGACGCTGTGTTTCGCATATTGCGGTATTTGAAGTCTGCTCCAGGGAAAGGATTGATCTTCTCCAAACATAGTCACTTGAATGTTTCTGGGTACACAGATGCAGATTGGGCAGGTAACATCACAGATCGTCGGTCCACTTCTGGTTATTTTACATTTGTTGGTGGTAACTTGGTAACTTGGAAGAGTAAGAAACAAAATGTGGTGGCTCGTTCTAGTGCTGAAGCAGAGTATAGAGGAATGGCTAGAGGACTTTGCGAGATGTTGTGGTTGAGACATTTGTTGAGAGATTTGGGGTTTAAACAGAGGAAGGCTATGCCTCTGTATTGTGATAATAAAGCTGCAATTGAAATTGCACACAATCTTGTTCAACATGATCGTACTAAGCATGTGGAGGTAGATCAACACTTTATTAAGGAGAAATTAGATGGACAAGTCATTTATTTCCCTTTTGTCCCTACAGAGGAGTAG

Protein Analysis

816

Amino Acids

92.0

Weight (kDa)

7.8

Isoelectric Point (pI)

47.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SH3_retrovirus PF25597 63 - 119 4.9e-23 Retroviral polymerase SH3-like domain
RVT_2 PF07727 362 - 605 1.5e-74 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000071)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G23160 AT4G23160
fragaria_vesca FvH4_2g08111 FvH4_2g17332 FvH4_2g18071 FvH4_2g20531 FvH4_2g20842 FvH4_2g20842 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g24231 FvH4_2g24232 FvH4_3g00831 FvH4_3g00831 FvH4_3g03561 FvH4_3g03561 FvH4_3g10282 FvH4_3g18165 FvH4_3g19021 FvH4_3g24071 FvH4_3g33123 FvH4_3g33970 FvH4_3g38851 FvH4_3g39133 FvH4_3g39271 FvH4_4g00981 FvH4_4g08191 FvH4_4g08311 FvH4_4g08311 FvH4_4g08311 FvH4_4g09341 FvH4_4g12550 FvH4_4g12550 FvH4_4g12550 FvH4_4g13391 FvH4_4g14842 FvH4_4g27901 FvH4_5g11561 FvH4_5g15611 FvH4_5g17991 FvH4_5g27871 FvH4_5g29995 FvH4_5g39662 FvH4_6g02392 FvH4_6g12781 FvH4_6g20106 FvH4_6g20106 FvH4_6g20106 FvH4_6g30872 FvH4_6g34901 FvH4_6g35632 FvH4_6g36661 FvH4_6g43795 FvH4_6g44611 FvH4_7g01791 FvH4_7g04041 FvH4_7g12551 FvH4_7g23351
malus_domestica MD00G1134200.v1.1 MD01G1096500.v1.1 MD01G1128200.v1.1 MD02G1250500.v1.1 MD02G1294900.v1.1 MD03G1121800.v1.1 MD04G1021400.v1.1 MD04G1051100.v1.1 MD04G1051300.v1.1 MD04G1099000.v1.1 MD05G1047900.v1.1 MD05G1298000.v1.1 MD06G1064200.v1.1 MD06G1120600.v1.1 MD07G1013900.v1.1 MD09G1226900.v1.1 MD10G1196700.v1.1 MD10G1307000.v1.1 MD10G1338900.v1.1 MD11G1107300.v1.1 MD11G1138300.v1.1 MD11G1236700.v1.1 MD12G1032500.v1.1 MD12G1150100.v1.1 MD12G1247800.v1.1 MD17G1267900.v1.1
pyrus_communis pycom02g03660 pycom02g13370 pycom02g14840 pycom02g18400 pycom02g18880 pycom02g22740 pycom04g08800 pycom04g15770 pycom05g07980 pycom05g19640 pycom06g09360 pycom07g13160 pycom08g11820 pycom08g21740 pycom09g19980 pycom10g04810 pycom10g05420 pycom10g14650 pycom11g03140 pycom11g21550 pycom12g14740 pycom13g01600 pycom13g29510 pycom14g07060 pycom15g01990 pycom15g19850 pycom15g30860 pycom16g15290 pycom16g16250 pycom16g25390 pycom17g17270 pycom520g00070
rosa_chinensis RchiOBHm_Chr1g0316691 RchiOBHm_Chr1g0320751 RchiOBHm_Chr1g0320771 RchiOBHm_Chr1g0322231 RchiOBHm_Chr1g0322861 RchiOBHm_Chr1g0328471 RchiOBHm_Chr1g0333321 RchiOBHm_Chr1g0337871 RchiOBHm_Chr1g0339051 RchiOBHm_Chr1g0349861 RchiOBHm_Chr1g0361951 RchiOBHm_Chr1g0365931 RchiOBHm_Chr1g0365981 RchiOBHm_Chr1g0377711 RchiOBHm_Chr1g0381581 RchiOBHm_Chr1g0382741 RchiOBHm_Chr1g0383501 RchiOBHm_Chr2g0101201 RchiOBHm_Chr2g0113601 RchiOBHm_Chr2g0124031 RchiOBHm_Chr2g0135481 RchiOBHm_Chr2g0148361 RchiOBHm_Chr2g0150101 RchiOBHm_Chr2g0154181 RchiOBHm_Chr2g0156071 RchiOBHm_Chr2g0166521 RchiOBHm_Chr2g0166821 RchiOBHm_Chr3g0448011 RchiOBHm_Chr3g0450941 RchiOBHm_Chr3g0450961 RchiOBHm_Chr3g0451051 RchiOBHm_Chr3g0451721 RchiOBHm_Chr3g0453371 RchiOBHm_Chr3g0454881 RchiOBHm_Chr3g0457421 RchiOBHm_Chr3g0457661 RchiOBHm_Chr3g0460011 RchiOBHm_Chr3g0461531 RchiOBHm_Chr3g0461981 RchiOBHm_Chr3g0463471 RchiOBHm_Chr3g0466641 RchiOBHm_Chr3g0468181 RchiOBHm_Chr3g0483351 RchiOBHm_Chr4g0394001 RchiOBHm_Chr4g0397261 RchiOBHm_Chr4g0404531 RchiOBHm_Chr4g0410841 RchiOBHm_Chr4g0415501 RchiOBHm_Chr4g0425221 RchiOBHm_Chr4g0430811 RchiOBHm_Chr5g0010831 RchiOBHm_Chr5g0016831 RchiOBHm_Chr5g0016851 RchiOBHm_Chr5g0031351 RchiOBHm_Chr5g0032151 RchiOBHm_Chr5g0041201 RchiOBHm_Chr5g0042191 RchiOBHm_Chr5g0064121 RchiOBHm_Chr5g0066601 RchiOBHm_Chr5g0078371 RchiOBHm_Chr5g0079271 RchiOBHm_Chr6g0263751 RchiOBHm_Chr6g0285111 RchiOBHm_Chr6g0298961 RchiOBHm_Chr6g0300481 RchiOBHm_Chr6g0303211 RchiOBHm_Chr7g0192341 RchiOBHm_Chr7g0196171 RchiOBHm_Chr7g0200281 RchiOBHm_Chr7g0200551 RchiOBHm_Chr7g0207611 RchiOBHm_Chr7g0212421 RchiOBHm_Chr7g0214991 RchiOBHm_Chr7g0219211 RchiOBHm_Chr7g0242371
rosa_laevigata RLG00000002389 RLG00000007980
rosa_roxburghii Rroxscaffold_1G00053480 Rroxscaffold_2G00090890 Rroxscaffold_2G00099660 Rroxscaffold_2G00134510 Rroxscaffold_3G00221450 Rroxscaffold_3G00240550 Rroxscaffold_4G00305710 Rroxscaffold_4G00306360 Rroxscaffold_4G00306800 Rroxscaffold_4G00329090 Rroxscaffold_5G00382750 Rroxscaffold_5G00385900 Rroxscaffold_6G00403080 Rroxscaffold_7G00172890 Rroxscaffold_7G00186690
rosa_samantha Rh1DG425600
rosa_wichuraiana Rw0G001640 Rw0G009160 Rw0G010480 Rw0G010520 Rw0G013850 Rw0G017170 Rw0G018520 Rw0G019280 Rw0G022780 Rw1G000360 Rw1G001410 Rw1G001630 Rw1G002100 Rw1G006810 Rw1G010680 Rw1G012700 Rw1G016160 Rw1G022180 Rw1G023580 Rw1G025640 Rw1G026310 Rw1G027230 Rw1G028110 Rw1G034180 Rw2G004990 Rw2G005840 Rw2G007350 Rw2G024730 Rw2G025580 Rw2G026670 Rw2G027210 Rw2G029060 Rw2G031560 Rw2G042190 Rw2G043850 Rw2G045990 Rw2G046130 Rw2G049290 Rw2G049310 Rw2G049790 Rw2G052250 Rw3G004350 Rw3G013100 Rw3G015280 Rw3G015720 Rw3G024630 Rw3G026470 Rw3G027840 Rw3G028960 Rw3G029130 Rw3G029160 Rw4G000280 Rw4G006650 Rw4G008970 Rw4G009310 Rw4G011730 Rw4G012000 Rw4G012610 Rw4G014300 Rw4G014690 Rw4G015190 Rw4G016470 Rw4G020750 Rw4G025060 Rw4G025080 Rw5G005610 Rw5G010380 Rw5G013970 Rw5G015130 Rw5G015250 Rw5G017640 Rw5G019910 Rw5G022410 Rw5G023550 Rw5G029710 Rw5G037650 Rw5G038280 Rw5G038570 Rw5G041550 Rw5G042600 Rw5G043910 Rw5G047850 Rw5G048200 Rw5G049920 Rw6G000260 Rw6G000530 Rw6G001710 Rw6G005090 Rw6G006730 Rw6G009310 Rw6G010950 Rw6G011630 Rw6G012080 Rw6G012750 Rw6G015970 Rw6G020700 Rw6G024350 Rw7G008540 Rw7G016620 Rw7G019400 Rw7G020010 Rw7G024240 Rw7G025630 Rw7G027550 Rw7G027770 Rw7G027960 Rw7G028450 Rw7G031280 Rw7G031970 Rw7G032180 Rw7G033590 Rw7G033720 Rw7G033890 Rw7G041800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1499
AarI CACCTGC 1 cut(s) 778
Acc36I ACCTGC 3 cut(s) 778, 1804, 2081
AccB7I CCANNNNNTGG 1 cut(s) 1473
AccI GTMKAC 3 cut(s) 944, 1148, 1590
AciI CCGC 2 cut(s) 85, 2002
AclI AACGTT 1 cut(s) 889
AclWI GGATC 3 cut(s) 638, 680, 1539
AcoI YGGCCR 1 cut(s) 666
AcsI RAATTY 2 cut(s) 498, 1658
AcuI CTGAAG 4 cut(s) 107, 138, 1475, 2220
AfaI GTAC 7 cut(s) 41, 1187, 1284, 1397, 1691, 2072, 2359
AfiI CCNNNNNNNGG 6 cut(s) 107, 124, 386, 1473, 2027, 2440
AflII CTTAAG 1 cut(s) 245
AgsI TTSAA 8 cut(s) 107, 485, 867, 1706, 2011, 2059, 2327, 2348
AhdI GACNNNNNGTC 1 cut(s) 381
AhlI ACTAGT 1 cut(s) 815
AjnI CCWGG 4 cut(s) 668, 1114, 1390, 2020
AleI CACNNNNGTG 1 cut(s) 458
AluBI AGCT 6 cut(s) 56, 158, 481, 1301, 1472, 2318
AluI AGCT 6 cut(s) 56, 158, 481, 1301, 1472, 2318
Alw26I GTCTC 9 cut(s) 15, 748, 769, 1005, 1238, 1446, 1908, 1964, 2245
AlwI GGATC 3 cut(s) 638, 680, 1539
AlwNI CAGNNNCTG 1 cut(s) 689
Ama87I CYCGRG 1 cut(s) 785
AoxI GGCC 1 cut(s) 666
ApeKI GCWGC 3 cut(s) 1298, 1321, 2318
ApoI RAATTY 2 cut(s) 498, 1658
AspLEI GCGC 1 cut(s) 722
AspS9I GGNCC 1 cut(s) 2112
AsuHPI GGTGA 7 cut(s) 316, 495, 759, 774, 1367, 1579, 1622
AvaI CYCGRG 1 cut(s) 785
AvaII GGWCC 1 cut(s) 2112
BaeI ACNNNNGTAYC 2 cut(s) 1619, 1652
BanII GRGCYC 1 cut(s) 244
BauI CACGAG 2 cut(s) 174, 1713
BbsI GAAGAC 3 cut(s) 705, 1130, 1644
BbvI GCAGC 3 cut(s) 1310, 1333, 2305
BccI CCATC 5 cut(s) 1060, 1163, 1476, 1830, 2399
BcgI CGANNNNNNTGC 2 cut(s) 1805, 1839
BciT130I CCWGG 4 cut(s) 670, 1116, 1392, 2022
BciVI GTATCC 1 cut(s) 1505
BcoDI GTCTC 9 cut(s) 15, 748, 769, 1005, 1238, 1446, 1908, 1964, 2245
BcuI ACTAGT 1 cut(s) 815
BfaI CTAG 9 cut(s) 237, 816, 858, 1008, 1757, 1911, 1922, 2193, 2223
BfmI CTRYAG 3 cut(s) 525, 1319, 2436
BfoI RGCGCY 1 cut(s) 723
BfrI CTTAAG 1 cut(s) 245
BfuAI ACCTGC 3 cut(s) 778, 1804, 2081
BfuI GTATCC 1 cut(s) 1505
BisI GCNGC 3 cut(s) 1299, 1322, 2319
BlsI GCNGC 3 cut(s) 1300, 1323, 2320
BmcAI AGTACT 1 cut(s) 1691
Bme1390I CCNGG 4 cut(s) 670, 1116, 1392, 2022
Bme18I GGWCC 1 cut(s) 2112
BmeRI GACNNNNNGTC 1 cut(s) 381
BmeT110I CYCGRG 1 cut(s) 785
BmgT120I GGNCC 1 cut(s) 2112
BmrFI CCNGG 4 cut(s) 670, 1116, 1392, 2022
BmrI ACTGGG 1 cut(s) 1959
BmsI GCATC 5 cut(s) 223, 1012, 1035, 1060, 2068
BmuI ACTGGG 1 cut(s) 1959
BpiI GAAGAC 3 cut(s) 705, 1130, 1644
BpmI CTGGAG 1 cut(s) 2004
BpuEI CTTGAG 1 cut(s) 1097
BsaAI YACGTR 1 cut(s) 1092
BsaI GGTCTC 2 cut(s) 15, 769
BsaJI CCNNGG 7 cut(s) 327, 669, 786, 871, 1115, 1391, 2021
BsaWI WCCGGW 2 cut(s) 595, 1409
BsaXI ACNNNNNCTCC 2 cut(s) 1088, 1118
Bsc4I CCNNNNNNNGG 6 cut(s) 107, 124, 386, 1473, 2027, 2440
Bse1I ACTGG 1 cut(s) 1965
Bse3DI GCAATG 2 cut(s) 1059, 1106
BseBI CCWGG 4 cut(s) 670, 1116, 1392, 2022
BseDI CCNNGG 7 cut(s) 327, 669, 786, 871, 1115, 1391, 2021
BseGI GGATG 9 cut(s) 238, 298, 337, 536, 1027, 1039, 1050, 1075, 1487
BseLI CCNNNNNNNGG 6 cut(s) 107, 124, 386, 1473, 2027, 2440
BseMI GCAATG 2 cut(s) 1059, 1106
BseMII CTCAG 3 cut(s) 287, 317, 1232
BseNI ACTGG 1 cut(s) 1965
BseRI GAGGAG 2 cut(s) 369, 1637
BseXI GCAGC 3 cut(s) 1310, 1333, 2305
BsgI GTGCAG 1 cut(s) 1037
Bsh1285I CGRYCG 2 cut(s) 661, 665
BshFI GGCC 1 cut(s) 668
BsiEI CGRYCG 2 cut(s) 661, 665
BsiHKCI CYCGRG 1 cut(s) 785
BsiSI CCGG 2 cut(s) 596, 1410
BslFI GGGAC 3 cut(s) 101, 292, 2417
BslI CCNNNNNNNGG 6 cut(s) 107, 124, 386, 1473, 2027, 2440
BsmAI GTCTC 9 cut(s) 15, 748, 769, 1005, 1238, 1446, 1908, 1964, 2245
BsmFI GGGAC 3 cut(s) 101, 292, 2417
BsmI GAATGC 1 cut(s) 1343
BsnI GGCC 1 cut(s) 668
Bso31I GGTCTC 2 cut(s) 15, 769
BsoBI CYCGRG 1 cut(s) 785
Bsp1286I GDGCHC 1 cut(s) 244
Bsp19I CCATGG 1 cut(s) 327
BspACI CCGC 2 cut(s) 85, 2002
BspANI GGCC 1 cut(s) 668
BspCNI CTCAG 3 cut(s) 286, 316, 1231
BspMAI CTGCAG 1 cut(s) 1323
BspMI ACCTGC 3 cut(s) 778, 1804, 2081
BspPI GGATC 3 cut(s) 638, 680, 1539
BspQI GCTCTTC 1 cut(s) 742
BspTI CTTAAG 1 cut(s) 245
BspTNI GGTCTC 2 cut(s) 15, 769
BsrDI GCAATG 2 cut(s) 1059, 1106
BsrI ACTGG 1 cut(s) 1965
BssECI CCNNGG 7 cut(s) 327, 669, 786, 871, 1115, 1391, 2021
BssNAI GTATAC 1 cut(s) 1149
BssSI CACGAG 2 cut(s) 174, 1713
BssT1I CCWWGG 1 cut(s) 327
Bst1107I GTATAC 1 cut(s) 1149
Bst2BI CACGAG 2 cut(s) 174, 1713
Bst2UI CCWGG 4 cut(s) 670, 1116, 1392, 2022
Bst4CI ACNGT 4 cut(s) 635, 1129, 1419, 1517
Bst6I CTCTTC 7 cut(s) 18, 108, 171, 742, 757, 1008, 2156
BstAFI CTTAAG 1 cut(s) 245
BstBAI YACGTR 1 cut(s) 1092
BstC8I GCNNGC 1 cut(s) 1050
BstDEI CTNAG 6 cut(s) 20, 273, 303, 905, 1218, 2361
BstDSI CCRYGG 2 cut(s) 327, 871
BstENI CCTNNNNNAGG 1 cut(s) 105
BstF5I GGATG 9 cut(s) 238, 298, 337, 536, 1027, 1039, 1050, 1075, 1487
BstH2I RGCGCY 1 cut(s) 723
BstHHI GCGC 1 cut(s) 722
BstMAI GTCTC 9 cut(s) 15, 748, 769, 1005, 1238, 1446, 1908, 1964, 2245
BstMCI CGRYCG 2 cut(s) 661, 665
BstMWI GCNNNNNNNGC 3 cut(s) 1259, 1321, 2087
BstNI CCWGG 4 cut(s) 670, 1116, 1392, 2022
BstNSI RCATGY 1 cut(s) 2369
BstSCI CCNGG 4 cut(s) 668, 1114, 1390, 2020
BstSFI CTRYAG 3 cut(s) 525, 1319, 2436
BstV1I GCAGC 3 cut(s) 1310, 1333, 2305
BstV2I GAAGAC 3 cut(s) 705, 1130, 1644
BstX2I RGATCY 2 cut(s) 643, 685
BstYI RGATCY 2 cut(s) 643, 685
BstZ17I GTATAC 1 cut(s) 1149
BsuI GTATCC 1 cut(s) 1505
BsuRI GGCC 1 cut(s) 668
BtgI CCRYGG 2 cut(s) 327, 871
BtsCI GGATG 9 cut(s) 238, 298, 337, 536, 1027, 1039, 1050, 1075, 1487
BtsI GCAGTG 1 cut(s) 625
BtsIMutI CAGTG 4 cut(s) 349, 574, 625, 1972
BveI ACCTGC 3 cut(s) 778, 1804, 2081
Cac8I GCNNGC 1 cut(s) 1050
CaiI CAGNNNCTG 1 cut(s) 689
CfoI GCGC 1 cut(s) 722
Cfr13I GGNCC 1 cut(s) 2112
CseI GACGC 1 cut(s) 1991
Csp6I GTAC 7 cut(s) 40, 1186, 1283, 1396, 1690, 2071, 2358
CviAII CATG 6 cut(s) 328, 1352, 1364, 1954, 2351, 2366
CviQI GTAC 7 cut(s) 40, 1186, 1283, 1396, 1690, 2071, 2358
DdeI CTNAG 6 cut(s) 20, 273, 303, 905, 1218, 2361
DraI TTTAAA 3 cut(s) 729, 1686, 2278
DriI GACNNNNNGTC 1 cut(s) 381
EaeI YGGCCR 1 cut(s) 666
Eam1104I CTCTTC 7 cut(s) 18, 108, 171, 742, 757, 1008, 2156
Eam1105I GACNNNNNGTC 1 cut(s) 381
EarI CTCTTC 7 cut(s) 18, 108, 171, 742, 757, 1008, 2156
Eco130I CCWWGG 1 cut(s) 327
Eco24I GRGCYC 1 cut(s) 244
Eco31I GGTCTC 2 cut(s) 15, 769
Eco32I GATATC 1 cut(s) 1871
Eco47I GGWCC 1 cut(s) 2112
Eco57I CTGAAG 4 cut(s) 107, 138, 1475, 2220
Eco88I CYCGRG 1 cut(s) 785
EcoNI CCTNNNNNAGG 1 cut(s) 105
EcoRII CCWGG 4 cut(s) 668, 1114, 1390, 2020
EcoRV GATATC 1 cut(s) 1871
EcoT14I CCWWGG 1 cut(s) 327
EcoT22I ATGCAT 2 cut(s) 1345, 1959
EcoT38I GRGCYC 1 cut(s) 244
ErhI CCWWGG 1 cut(s) 327
FaeI CATG 6 cut(s) 331, 1355, 1367, 1957, 2354, 2369
FalI AAGNNNNNCTT 2 cut(s) 1679, 1711
FaqI GGGAC 3 cut(s) 101, 292, 2417
FatI CATG 6 cut(s) 327, 1351, 1363, 1953, 2350, 2365
FauNDI CATATG 2 cut(s) 967, 1977
FblI GTMKAC 3 cut(s) 944, 1148, 1590
Fnu4HI GCNGC 3 cut(s) 1299, 1322, 2319
FokI GGATG 9 cut(s) 245, 285, 344, 523, 1034, 1046, 1057, 1082, 1494
FriOI GRGCYC 1 cut(s) 244
Fsp4HI GCNGC 3 cut(s) 1299, 1322, 2319
FspBI CTAG 9 cut(s) 237, 816, 858, 1008, 1757, 1911, 1922, 2193, 2223
GlaI GCGC 1 cut(s) 721
GluI GCNGC 3 cut(s) 1299, 1322, 2319
GsuI CTGGAG 1 cut(s) 2004
HaeII RGCGCY 1 cut(s) 723
HaeIII GGCC 1 cut(s) 668
HapII CCGG 2 cut(s) 596, 1410
HgaI GACGC 1 cut(s) 1991
HhaI GCGC 1 cut(s) 722
Hin1II CATG 6 cut(s) 331, 1355, 1367, 1957, 2354, 2369
Hin6I GCGC 1 cut(s) 720
HinP1I GCGC 1 cut(s) 720
HincII GTYRAC 1 cut(s) 1742
HindII GTYRAC 1 cut(s) 1742
HinfI GANTC 9 cut(s) 376, 564, 608, 692, 776, 982, 1084, 1738, 1972
HpaII CCGG 2 cut(s) 596, 1410
HphI GGTGA 7 cut(s) 316, 495, 759, 774, 1367, 1579, 1622
Hpy166II GTNNAC 7 cut(s) 945, 1149, 1180, 1591, 1742, 2073, 2115
Hpy188III TCNNGA 4 cut(s) 647, 689, 1076, 1757
Hpy8I GTNNAC 7 cut(s) 945, 1149, 1180, 1591, 1742, 2073, 2115
Hpy99I CGWCG 1 cut(s) 2112
HpyAV CCTTC 5 cut(s) 98, 162, 1024, 1663, 2281
HpyCH4III ACNGT 4 cut(s) 635, 1129, 1419, 1517
HpyCH4IV ACGT 2 cut(s) 889, 1091
HpyF10VI GCNNNNNNNGC 3 cut(s) 1259, 1321, 2087
HpyF3I CTNAG 6 cut(s) 20, 273, 303, 905, 1218, 2361
HpySE526I ACGT 2 cut(s) 889, 1091
Hsp92II CATG 6 cut(s) 331, 1355, 1367, 1957, 2354, 2369
HspAI GCGC 1 cut(s) 720
LguI GCTCTTC 1 cut(s) 742
LmnI GCTCC 1 cut(s) 2023
Lsp1109I GCAGC 3 cut(s) 1310, 1333, 2305
LweI GCATC 5 cut(s) 223, 1012, 1035, 1060, 2068
MaeI CTAG 9 cut(s) 237, 816, 858, 1008, 1757, 1911, 1922, 2193, 2223
MaeII ACGT 2 cut(s) 889, 1091
MfeI CAATTG 3 cut(s) 927, 1640, 2322
MflI RGATCY 2 cut(s) 643, 685
MhlI GDGCHC 1 cut(s) 244
MlyI GAGTC 3 cut(s) 370, 1747, 1966
MmeI TCCRAC 3 cut(s) 403, 681, 866
Mph1103I ATGCAT 2 cut(s) 1345, 1959
MslI CAYNNNNRTG 3 cut(s) 458, 1557, 2058
MspCI CTTAAG 1 cut(s) 245
MspI CCGG 2 cut(s) 596, 1410
MspR9I CCNGG 4 cut(s) 670, 1116, 1392, 2022
MssI GTTTAAAC 1 cut(s) 2278
MunI CAATTG 3 cut(s) 927, 1640, 2322
Mva1269I GAATGC 1 cut(s) 1343
MvaI CCWGG 4 cut(s) 670, 1116, 1392, 2022
MwoI GCNNNNNNNGC 3 cut(s) 1259, 1321, 2087
NcoI CCATGG 1 cut(s) 327
NdeI CATATG 2 cut(s) 967, 1977
NlaIII CATG 6 cut(s) 331, 1355, 1367, 1957, 2354, 2369
NmuCI GTSAC 8 cut(s) 322, 373, 439, 451, 569, 1567, 1603, 2051
NsiI ATGCAT 2 cut(s) 1345, 1959
NspI RCATGY 1 cut(s) 2369
OliI CACNNNNGTG 1 cut(s) 458
PaqCI CACCTGC 1 cut(s) 778
PciSI GCTCTTC 1 cut(s) 742
PcsI WCGNNNNNNNCGW 1 cut(s) 868
PctI GAATGC 1 cut(s) 1343
PfeI GAWTC 6 cut(s) 564, 608, 692, 776, 982, 1084
PflMI CCANNNNNTGG 1 cut(s) 1473
PkrI GCNGC 3 cut(s) 1300, 1323, 2320
Ple19I CGATCG 1 cut(s) 665
PleI GAGTC 3 cut(s) 370, 1746, 1966
PmeI GTTTAAAC 1 cut(s) 2278
PpsI GAGTC 3 cut(s) 370, 1746, 1966
Ppu21I YACGTR 1 cut(s) 1092
PsiI TTATAA 1 cut(s) 1499
Psp1406I AACGTT 1 cut(s) 889
Psp6I CCWGG 4 cut(s) 668, 1114, 1390, 2020
PspGI CCWGG 4 cut(s) 668, 1114, 1390, 2020
PspPI GGNCC 1 cut(s) 2112
PstI CTGCAG 1 cut(s) 1323
PstNI CAGNNNCTG 1 cut(s) 689
PsuI RGATCY 2 cut(s) 643, 685
PvuI CGATCG 1 cut(s) 665
RsaI GTAC 7 cut(s) 41, 1187, 1284, 1397, 1691, 2072, 2359
RsaNI GTAC 7 cut(s) 40, 1186, 1283, 1396, 1690, 2071, 2358
RseI CAYNNNNRTG 3 cut(s) 458, 1557, 2058
SapI GCTCTTC 1 cut(s) 742
SatI GCNGC 3 cut(s) 1299, 1322, 2319
Sau96I GGNCC 1 cut(s) 2112
ScaI AGTACT 1 cut(s) 1691
SchI GAGTC 3 cut(s) 370, 1747, 1966
ScrFI CCNGG 4 cut(s) 670, 1116, 1392, 2022
SduI GDGCHC 1 cut(s) 244
SfaNI GCATC 5 cut(s) 223, 1012, 1035, 1060, 2068
SfcI CTRYAG 3 cut(s) 525, 1319, 2436
SinI GGWCC 1 cut(s) 2112
SmiMI CAYNNNNRTG 3 cut(s) 458, 1557, 2058
SmlI CTYRAG 2 cut(s) 245, 1076
SmoI CTYRAG 2 cut(s) 245, 1076
SpeI ACTAGT 1 cut(s) 815
SsiI CCGC 2 cut(s) 85, 2002
SspMI CTAG 9 cut(s) 237, 816, 858, 1008, 1757, 1911, 1922, 2193, 2223
StyD4I CCNGG 4 cut(s) 668, 1114, 1390, 2020
StyI CCWWGG 1 cut(s) 327
TaaI ACNGT 4 cut(s) 635, 1129, 1419, 1517
TaiI ACGT 2 cut(s) 892, 1094
TaqII GACCGA 3 cut(s) 675, 751, 2100
TatI WGTACW 1 cut(s) 1689
TfiI GAWTC 6 cut(s) 564, 608, 692, 776, 982, 1084
TscAI CASTG 4 cut(s) 349, 574, 625, 1972
TseFI GTSAC 8 cut(s) 322, 373, 439, 451, 569, 1567, 1603, 2051
TseI GCWGC 3 cut(s) 1298, 1321, 2318
Tsp45I GTSAC 8 cut(s) 322, 373, 439, 451, 569, 1567, 1603, 2051
TspRI CASTG 4 cut(s) 349, 574, 625, 1972
Van91I CCANNNNNTGG 1 cut(s) 1473
Vha464I CTTAAG 1 cut(s) 245
VpaK11BI GGWCC 1 cut(s) 2112
XagI CCTNNNNNAGG 1 cut(s) 105
XapI RAATTY 2 cut(s) 498, 1658
XbaI TCTAGA 1 cut(s) 1756
XceI RCATGY 1 cut(s) 2369
XcmI CCANNNNNNNNNTGG 1 cut(s) 42
XmiI GTMKAC 3 cut(s) 944, 1148, 1590
XspI CTAG 9 cut(s) 237, 816, 858, 1008, 1757, 1911, 1922, 2193, 2223
ZrmI AGTACT 1 cut(s) 1691
Zsp2I ATGCAT 2 cut(s) 1345, 1959
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.