Rw4G014690

Reverse transcriptase (RNA-dependent DNA polymerase)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000071
Physical Location & Seq
Reverse (-)
34070807 .. 34071832
1026 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G014690.1

Sequence Viewer

Length: 1026 bp
ATGCAATCTGTGGCAGATTATTCATTATTCACCAGGTCCACAGATTCTTCCTTTACTGCTATCTTAATCTATGTGGATGACATTGTGATTACAGGAAATGATCCCACAGCCATTCAGTCTCTTAAATATTTCCTAAATCAACGCTTTCGAATCAAAGACCTTGGAAATTTGAAGTACTTTTTGGGCATAGAAGTGGCACGTTCCAAGAAAGGGATTTTTATTTCTCAAAGAAAGTATGCCTTAGAGATAATTGATGATGCAGGACTTCTTGGAACATGTCCAGATGCGTTTCCTATGGAGCAGCACTTGAAACTTTCTCCCACTAATGGGGATTTGCTACATGATCCTTCATGCTACAGAAGGTTAGTAGGACGTCTTATTTATCTTACAGTGACACGGCCTGATATTGTGTTTTCAGTTCATGTATTAAGTCGTTTCATGCATCAACCACGAAAACCACATATGGAAGCTGCACTTGGTGTCTTACGCTATTTGAAAGGAACACCAGGGCAAGGACTCTTTTTTCTTATGGATAGTTCTCTTGAGCTAAAAGAATATTTTGATTCAGACTGGGCTAGTTGTCCAATTACAAGAAGGTCAGTCACTGGTTATTGTACATTCTTTGGGAATTCTTTGATCTCTTGGAAAACCAATAAGCAAGACACAGTTGCGCGATCAACTGCAGAAGCTGAGTATCGATCCATGGCAGAGGCTAGTTGTGAACTAGTTTGGCTGCAATTTATTTTGAAAGATCTTGGTATTATCAACTCAAACCCAACAAAGCTGCATTGTGATAATCAGTCAGCCCTGTTCATTGCAGGAAATTTGGTATTCCATGAGAGGACTAAACACATTGACTTGGATTGCCATGTGGTGCGACAATACATAAAGTCTGGAAGGATTGAAACGGCCTACACACCCACATCTCAACAGATTGCAGATGTTTTTACAAAACCATTAGGCAAGGCATCCTTTGAATTTCTAGTTAACAAGTTGGGAGTTCACAATATCCACTCTCCAACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2 Retrotran_gag_3 Retrotrans_gag

Protein Analysis

341

Amino Acids

38.61

Weight (kDa)

8.57

Isoelectric Point (pI)

42.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_2 PF07727 5 - 100 6.4e-18 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000071)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G23160 AT4G23160
fragaria_vesca FvH4_2g08111 FvH4_2g17332 FvH4_2g18071 FvH4_2g20531 FvH4_2g20842 FvH4_2g20842 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g24231 FvH4_2g24232 FvH4_3g00831 FvH4_3g00831 FvH4_3g03561 FvH4_3g03561 FvH4_3g10282 FvH4_3g18165 FvH4_3g19021 FvH4_3g24071 FvH4_3g33123 FvH4_3g33970 FvH4_3g38851 FvH4_3g39133 FvH4_3g39271 FvH4_4g00981 FvH4_4g08191 FvH4_4g08311 FvH4_4g08311 FvH4_4g08311 FvH4_4g09341 FvH4_4g12550 FvH4_4g12550 FvH4_4g12550 FvH4_4g13391 FvH4_4g14842 FvH4_4g27901 FvH4_5g11561 FvH4_5g15611 FvH4_5g17991 FvH4_5g27871 FvH4_5g29995 FvH4_5g39662 FvH4_6g02392 FvH4_6g12781 FvH4_6g20106 FvH4_6g20106 FvH4_6g20106 FvH4_6g30872 FvH4_6g34901 FvH4_6g35632 FvH4_6g36661 FvH4_6g43795 FvH4_6g44611 FvH4_7g01791 FvH4_7g04041 FvH4_7g12551 FvH4_7g23351
malus_domestica MD00G1134200.v1.1 MD01G1096500.v1.1 MD01G1128200.v1.1 MD02G1250500.v1.1 MD02G1294900.v1.1 MD03G1121800.v1.1 MD04G1021400.v1.1 MD04G1051100.v1.1 MD04G1051300.v1.1 MD04G1099000.v1.1 MD05G1047900.v1.1 MD05G1298000.v1.1 MD06G1064200.v1.1 MD06G1120600.v1.1 MD07G1013900.v1.1 MD09G1226900.v1.1 MD10G1196700.v1.1 MD10G1307000.v1.1 MD10G1338900.v1.1 MD11G1107300.v1.1 MD11G1138300.v1.1 MD11G1236700.v1.1 MD12G1032500.v1.1 MD12G1150100.v1.1 MD12G1247800.v1.1 MD17G1267900.v1.1
pyrus_communis pycom02g03660 pycom02g13370 pycom02g14840 pycom02g18400 pycom02g18880 pycom02g22740 pycom04g08800 pycom04g15770 pycom05g07980 pycom05g19640 pycom06g09360 pycom07g13160 pycom08g11820 pycom08g21740 pycom09g19980 pycom10g04810 pycom10g05420 pycom10g14650 pycom11g03140 pycom11g21550 pycom12g14740 pycom13g01600 pycom13g29510 pycom14g07060 pycom15g01990 pycom15g19850 pycom15g30860 pycom16g15290 pycom16g16250 pycom16g25390 pycom17g17270 pycom520g00070
rosa_chinensis RchiOBHm_Chr1g0316691 RchiOBHm_Chr1g0320751 RchiOBHm_Chr1g0320771 RchiOBHm_Chr1g0322231 RchiOBHm_Chr1g0322861 RchiOBHm_Chr1g0328471 RchiOBHm_Chr1g0333321 RchiOBHm_Chr1g0337871 RchiOBHm_Chr1g0339051 RchiOBHm_Chr1g0349861 RchiOBHm_Chr1g0361951 RchiOBHm_Chr1g0365931 RchiOBHm_Chr1g0365981 RchiOBHm_Chr1g0377711 RchiOBHm_Chr1g0381581 RchiOBHm_Chr1g0382741 RchiOBHm_Chr1g0383501 RchiOBHm_Chr2g0101201 RchiOBHm_Chr2g0113601 RchiOBHm_Chr2g0124031 RchiOBHm_Chr2g0135481 RchiOBHm_Chr2g0148361 RchiOBHm_Chr2g0150101 RchiOBHm_Chr2g0154181 RchiOBHm_Chr2g0156071 RchiOBHm_Chr2g0166521 RchiOBHm_Chr2g0166821 RchiOBHm_Chr3g0448011 RchiOBHm_Chr3g0450941 RchiOBHm_Chr3g0450961 RchiOBHm_Chr3g0451051 RchiOBHm_Chr3g0451721 RchiOBHm_Chr3g0453371 RchiOBHm_Chr3g0454881 RchiOBHm_Chr3g0457421 RchiOBHm_Chr3g0457661 RchiOBHm_Chr3g0460011 RchiOBHm_Chr3g0461531 RchiOBHm_Chr3g0461981 RchiOBHm_Chr3g0463471 RchiOBHm_Chr3g0466641 RchiOBHm_Chr3g0468181 RchiOBHm_Chr3g0483351 RchiOBHm_Chr4g0394001 RchiOBHm_Chr4g0397261 RchiOBHm_Chr4g0404531 RchiOBHm_Chr4g0410841 RchiOBHm_Chr4g0415501 RchiOBHm_Chr4g0425221 RchiOBHm_Chr4g0430811 RchiOBHm_Chr5g0010831 RchiOBHm_Chr5g0016831 RchiOBHm_Chr5g0016851 RchiOBHm_Chr5g0031351 RchiOBHm_Chr5g0032151 RchiOBHm_Chr5g0041201 RchiOBHm_Chr5g0042191 RchiOBHm_Chr5g0064121 RchiOBHm_Chr5g0066601 RchiOBHm_Chr5g0078371 RchiOBHm_Chr5g0079271 RchiOBHm_Chr6g0263751 RchiOBHm_Chr6g0285111 RchiOBHm_Chr6g0298961 RchiOBHm_Chr6g0300481 RchiOBHm_Chr6g0303211 RchiOBHm_Chr7g0192341 RchiOBHm_Chr7g0196171 RchiOBHm_Chr7g0200281 RchiOBHm_Chr7g0200551 RchiOBHm_Chr7g0207611 RchiOBHm_Chr7g0212421 RchiOBHm_Chr7g0214991 RchiOBHm_Chr7g0219211 RchiOBHm_Chr7g0242371
rosa_laevigata RLG00000002389 RLG00000007980
rosa_roxburghii Rroxscaffold_1G00053480 Rroxscaffold_2G00090890 Rroxscaffold_2G00099660 Rroxscaffold_2G00134510 Rroxscaffold_3G00221450 Rroxscaffold_3G00240550 Rroxscaffold_4G00305710 Rroxscaffold_4G00306360 Rroxscaffold_4G00306800 Rroxscaffold_4G00329090 Rroxscaffold_5G00382750 Rroxscaffold_5G00385900 Rroxscaffold_6G00403080 Rroxscaffold_7G00172890 Rroxscaffold_7G00186690
rosa_samantha Rh1DG425600
rosa_wichuraiana Rw0G001640 Rw0G009160 Rw0G010480 Rw0G010520 Rw0G013850 Rw0G017170 Rw0G018520 Rw0G019280 Rw0G022780 Rw1G000360 Rw1G001410 Rw1G001630 Rw1G002100 Rw1G006810 Rw1G010680 Rw1G012700 Rw1G016160 Rw1G022180 Rw1G023580 Rw1G025640 Rw1G026310 Rw1G027230 Rw1G028110 Rw1G034180 Rw2G004990 Rw2G005840 Rw2G007350 Rw2G024730 Rw2G025580 Rw2G026670 Rw2G027210 Rw2G029060 Rw2G031560 Rw2G042190 Rw2G043850 Rw2G045990 Rw2G046130 Rw2G049290 Rw2G049310 Rw2G049790 Rw2G052250 Rw3G004350 Rw3G013100 Rw3G015280 Rw3G015720 Rw3G024630 Rw3G026470 Rw3G027840 Rw3G028960 Rw3G029130 Rw3G029160 Rw4G000280 Rw4G006650 Rw4G008970 Rw4G009310 Rw4G011730 Rw4G012000 Rw4G012610 Rw4G014300 Rw4G014690 Rw4G015190 Rw4G016470 Rw4G020750 Rw4G025060 Rw4G025080 Rw5G005610 Rw5G010380 Rw5G013970 Rw5G015130 Rw5G015250 Rw5G017640 Rw5G019910 Rw5G022410 Rw5G023550 Rw5G029710 Rw5G037650 Rw5G038280 Rw5G038570 Rw5G041550 Rw5G042600 Rw5G043910 Rw5G047850 Rw5G048200 Rw5G049920 Rw6G000260 Rw6G000530 Rw6G001710 Rw6G005090 Rw6G006730 Rw6G009310 Rw6G010950 Rw6G011630 Rw6G012080 Rw6G012750 Rw6G015970 Rw6G020700 Rw6G024350 Rw7G008540 Rw7G016620 Rw7G019400 Rw7G020010 Rw7G024240 Rw7G025630 Rw7G027550 Rw7G027770 Rw7G027960 Rw7G028450 Rw7G031280 Rw7G031970 Rw7G032180 Rw7G033590 Rw7G033720 Rw7G033890 Rw7G041800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 376
AccII CGCG 1 cut(s) 673
AclWI GGATC 3 cut(s) 95, 338, 693
AcsI RAATTY 4 cut(s) 166, 628, 823, 977
AcyI GRCGYC 1 cut(s) 373
AdeI CACNNNGTG 1 cut(s) 479
AfaI GTAC 2 cut(s) 176, 616
AfiI CCNNNNNNNGG 4 cut(s) 210, 326, 327, 512
AflIII ACRYGT 1 cut(s) 275
AgsI TTSAA 6 cut(s) 172, 310, 496, 748, 905, 977
AhlI ACTAGT 1 cut(s) 724
AjnI CCWGG 2 cut(s) 32, 505
AjuI GAANNNNNNNTTGG 4 cut(s) 164, 196, 459, 491
AluBI AGCT 4 cut(s) 470, 547, 689, 784
AluI AGCT 4 cut(s) 470, 547, 689, 784
Alw26I GTCTC 1 cut(s) 123
AlwI GGATC 3 cut(s) 95, 338, 693
AlwNI CAGNNNCTG 2 cut(s) 605, 689
AoxI GGCC 2 cut(s) 398, 909
ApeKI GCWGC 4 cut(s) 301, 470, 733, 784
ApoI RAATTY 4 cut(s) 166, 628, 823, 977
AspLEI GCGC 1 cut(s) 673
AspS9I GGNCC 1 cut(s) 36
AsuHPI GGTGA 1 cut(s) 22
AsuII TTCGAA 1 cut(s) 148
AvaII GGWCC 1 cut(s) 36
BbvI GCAGC 4 cut(s) 313, 457, 720, 771
BceAI ACGGC 2 cut(s) 413, 924
BciT130I CCWGG 2 cut(s) 34, 507
BcoDI GTCTC 1 cut(s) 123
BcuI ACTAGT 1 cut(s) 724
BfaI CTAG 4 cut(s) 576, 714, 725, 983
BfmI CTRYAG 2 cut(s) 355, 681
BglII AGATCT 1 cut(s) 751
BisI GCNGC 4 cut(s) 302, 471, 734, 785
BlsI GCNGC 4 cut(s) 303, 472, 735, 786
BmcAI AGTACT 1 cut(s) 176
Bme1390I CCNGG 2 cut(s) 34, 507
Bme18I GGWCC 1 cut(s) 36
BmgT120I GGNCC 1 cut(s) 36
BmrFI CCNGG 2 cut(s) 34, 507
BmrI ACTGGG 1 cut(s) 580
BmsI GCATC 4 cut(s) 247, 274, 451, 977
BmuI ACTGGG 1 cut(s) 580
Bpu14I TTCGAA 1 cut(s) 148
BpuEI CTTGAG 1 cut(s) 563
Bsa29I ATCGAT 1 cut(s) 697
BsaHI GRCGYC 1 cut(s) 373
BsaJI CCNNGG 3 cut(s) 160, 506, 702
Bsc4I CCNNNNNNNGG 4 cut(s) 210, 326, 327, 512
Bse1I ACTGG 2 cut(s) 575, 610
Bse3DI GCAATG 1 cut(s) 813
BseBI CCWGG 2 cut(s) 34, 507
BseCI ATCGAT 1 cut(s) 697
BseDI CCNNGG 3 cut(s) 160, 506, 702
BseGI GGATG 2 cut(s) 82, 968
BseLI CCNNNNNNNGG 4 cut(s) 210, 326, 327, 512
BseMI GCAATG 1 cut(s) 813
BseMII CTCAG 1 cut(s) 681
BseNI ACTGG 2 cut(s) 575, 610
BseXI GCAGC 4 cut(s) 313, 457, 720, 771
BsgI GTGCAG 1 cut(s) 456
Bsh1236I CGCG 1 cut(s) 673
BshFI GGCC 2 cut(s) 400, 911
BshVI ATCGAT 1 cut(s) 697
BslI CCNNNNNNNGG 4 cut(s) 210, 326, 327, 512
BsmAI GTCTC 1 cut(s) 123
BsnI GGCC 2 cut(s) 400, 911
Bsp119I TTCGAA 1 cut(s) 148
Bsp1407I TGTACA 1 cut(s) 614
Bsp143I GATC 6 cut(s) 100, 343, 636, 674, 698, 751
Bsp19I CCATGG 1 cut(s) 702
BspANI GGCC 2 cut(s) 400, 911
BspCNI CTCAG 1 cut(s) 682
BspDI ATCGAT 1 cut(s) 697
BspFNI CGCG 1 cut(s) 673
BspMAI CTGCAG 1 cut(s) 685
BspPI GGATC 3 cut(s) 95, 338, 693
BspT104I TTCGAA 1 cut(s) 148
BsrDI GCAATG 1 cut(s) 813
BsrGI TGTACA 1 cut(s) 614
BsrI ACTGG 2 cut(s) 575, 610
BssECI CCNNGG 3 cut(s) 160, 506, 702
BssMI GATC 6 cut(s) 100, 343, 636, 674, 698, 751
BssNI GRCGYC 1 cut(s) 373
BssT1I CCWWGG 2 cut(s) 160, 702
Bst2UI CCWGG 2 cut(s) 34, 507
Bst4CI ACNGT 2 cut(s) 391, 667
BstACI GRCGYC 1 cut(s) 373
BstAUI TGTACA 1 cut(s) 614
BstBI TTCGAA 1 cut(s) 148
BstDEI CTNAG 2 cut(s) 241, 690
BstDSI CCRYGG 1 cut(s) 702
BstF5I GGATG 2 cut(s) 82, 968
BstFNI CGCG 1 cut(s) 673
BstHHI GCGC 1 cut(s) 673
BstKTI GATC 6 cut(s) 103, 346, 639, 677, 701, 754
BstMAI GTCTC 1 cut(s) 123
BstMBI GATC 6 cut(s) 100, 343, 636, 674, 698, 751
BstNI CCWGG 2 cut(s) 34, 507
BstNSI RCATGY 1 cut(s) 279
BstSCI CCNGG 2 cut(s) 32, 505
BstSFI CTRYAG 2 cut(s) 355, 681
BstUI CGCG 1 cut(s) 673
BstV1I GCAGC 4 cut(s) 313, 457, 720, 771
BstX2I RGATCY 1 cut(s) 751
BstYI RGATCY 1 cut(s) 751
Bsu15I ATCGAT 1 cut(s) 697
BsuRI GGCC 2 cut(s) 400, 911
BsuTUI ATCGAT 1 cut(s) 697
BtgI CCRYGG 1 cut(s) 702
BtsCI GGATG 2 cut(s) 82, 968
BtsIMutI CAGTG 2 cut(s) 396, 603
CaiI CAGNNNCTG 2 cut(s) 605, 689
CfoI GCGC 1 cut(s) 673
Cfr13I GGNCC 1 cut(s) 36
ClaI ATCGAT 1 cut(s) 697
CsiI ACCWGGT 1 cut(s) 32
Csp6I GTAC 2 cut(s) 175, 615
CviAII CATG 8 cut(s) 276, 341, 351, 422, 439, 703, 836, 869
CviQI GTAC 2 cut(s) 175, 615
DdeI CTNAG 2 cut(s) 241, 690
DpnI GATC 6 cut(s) 102, 345, 638, 676, 700, 753
DpnII GATC 6 cut(s) 100, 343, 636, 674, 698, 751
DraIII CACNNNGTG 1 cut(s) 479
Eco130I CCWWGG 2 cut(s) 160, 702
Eco47I GGWCC 1 cut(s) 36
EcoRI GAATTC 1 cut(s) 628
EcoRII CCWGG 2 cut(s) 32, 505
EcoT14I CCWWGG 2 cut(s) 160, 702
EcoT22I ATGCAT 1 cut(s) 444
ErhI CCWWGG 2 cut(s) 160, 702
FaeI CATG 8 cut(s) 279, 344, 354, 425, 442, 706, 839, 872
FalI AAGNNNNNCTT 6 cut(s) 224, 256, 459, 491, 956, 988
FatI CATG 8 cut(s) 275, 340, 350, 421, 438, 702, 835, 868
FauNDI CATATG 1 cut(s) 462
Fnu4HI GCNGC 4 cut(s) 302, 471, 734, 785
FokI GGATG 2 cut(s) 89, 955
Fsp4HI GCNGC 4 cut(s) 302, 471, 734, 785
FspBI CTAG 4 cut(s) 576, 714, 725, 983
GlaI GCGC 1 cut(s) 672
GluI GCNGC 4 cut(s) 302, 471, 734, 785
HaeIII GGCC 2 cut(s) 400, 911
HhaI GCGC 1 cut(s) 673
Hin1I GRCGYC 1 cut(s) 373
Hin1II CATG 8 cut(s) 279, 344, 354, 425, 442, 706, 839, 872
Hin6I GCGC 1 cut(s) 671
HinP1I GCGC 1 cut(s) 671
HincII GTYRAC 1 cut(s) 988
HindII GTYRAC 1 cut(s) 988
HinfI GANTC 4 cut(s) 44, 150, 516, 563
HpaI GTTAAC 1 cut(s) 988
HphI GGTGA 1 cut(s) 22
Hpy166II GTNNAC 4 cut(s) 39, 722, 988, 1003
Hpy188I TCNGA 1 cut(s) 568
Hpy188III TCNNGA 3 cut(s) 281, 542, 894
Hpy8I GTNNAC 4 cut(s) 39, 722, 988, 1003
HpyAV CCTTC 4 cut(s) 354, 357, 588, 891
HpyCH4III ACNGT 2 cut(s) 391, 667
HpyCH4IV ACGT 2 cut(s) 199, 373
HpyCH4V TGCA 9 cut(s) 4, 260, 442, 473, 683, 736, 787, 818, 938
HpyF3I CTNAG 2 cut(s) 241, 690
HpySE526I ACGT 2 cut(s) 199, 373
Hsp92I GRCGYC 1 cut(s) 373
Hsp92II CATG 8 cut(s) 279, 344, 354, 425, 442, 706, 839, 872
HspAI GCGC 1 cut(s) 671
KspAI GTTAAC 1 cut(s) 988
Kzo9I GATC 6 cut(s) 100, 343, 636, 674, 698, 751
LmnI GCTCC 1 cut(s) 298
Lsp1109I GCAGC 4 cut(s) 313, 457, 720, 771
LweI GCATC 4 cut(s) 247, 274, 451, 977
MabI ACCWGGT 1 cut(s) 32
MaeI CTAG 4 cut(s) 576, 714, 725, 983
MaeII ACGT 2 cut(s) 199, 373
MaeIII GTNAC 2 cut(s) 391, 601
MalI GATC 6 cut(s) 102, 345, 638, 676, 700, 753
MboI GATC 6 cut(s) 100, 343, 636, 674, 698, 751
MboII GAAGA 1 cut(s) 39
MflI RGATCY 1 cut(s) 751
MluCI AATT 7 cut(s) 166, 249, 585, 628, 737, 823, 977
MlyI GAGTC 1 cut(s) 510
MnlI CCTC 2 cut(s) 703, 834
Mph1103I ATGCAT 1 cut(s) 444
MseI TTAA 4 cut(s) 65, 123, 428, 987
MslI CAYNNNNRTG 1 cut(s) 191
MspR9I CCNGG 2 cut(s) 34, 507
MvaI CCWGG 2 cut(s) 34, 507
MvnI CGCG 1 cut(s) 673
NcoI CCATGG 1 cut(s) 702
NdeI CATATG 1 cut(s) 462
NdeII GATC 6 cut(s) 100, 343, 636, 674, 698, 751
NlaIII CATG 8 cut(s) 279, 344, 354, 425, 442, 706, 839, 872
NmuCI GTSAC 2 cut(s) 391, 601
NsiI ATGCAT 1 cut(s) 444
NspI RCATGY 1 cut(s) 279
NspV TTCGAA 1 cut(s) 148
PciI ACATGT 1 cut(s) 275
PfeI GAWTC 3 cut(s) 44, 150, 563
PkrI GCNGC 4 cut(s) 303, 472, 735, 786
PleI GAGTC 1 cut(s) 510
PpsI GAGTC 1 cut(s) 510
PscI ACATGT 1 cut(s) 275
Psp6I CCWGG 2 cut(s) 32, 505
PspGI CCWGG 2 cut(s) 32, 505
PspPI GGNCC 1 cut(s) 36
PstI CTGCAG 1 cut(s) 685
PstNI CAGNNNCTG 2 cut(s) 605, 689
PsuI RGATCY 1 cut(s) 751
RsaI GTAC 2 cut(s) 176, 616
RsaNI GTAC 2 cut(s) 175, 615
RseI CAYNNNNRTG 1 cut(s) 191
SaqAI TTAA 4 cut(s) 65, 123, 428, 987
SatI GCNGC 4 cut(s) 302, 471, 734, 785
Sau3AI GATC 6 cut(s) 100, 343, 636, 674, 698, 751
Sau96I GGNCC 1 cut(s) 36
ScaI AGTACT 1 cut(s) 176
SchI GAGTC 1 cut(s) 510
ScrFI CCNGG 2 cut(s) 34, 507
SexAI ACCWGGT 1 cut(s) 32
SfaNI GCATC 4 cut(s) 247, 274, 451, 977
SfcI CTRYAG 2 cut(s) 355, 681
SfuI TTCGAA 1 cut(s) 148
SinI GGWCC 1 cut(s) 36
SmiMI CAYNNNNRTG 1 cut(s) 191
SmlI CTYRAG 1 cut(s) 542
SmoI CTYRAG 1 cut(s) 542
SpeI ACTAGT 1 cut(s) 724
Sse9I AATT 7 cut(s) 166, 249, 585, 628, 737, 823, 977
SspI AATATT 2 cut(s) 128, 557
SspMI CTAG 4 cut(s) 576, 714, 725, 983
StyD4I CCNGG 2 cut(s) 32, 505
StyI CCWWGG 2 cut(s) 160, 702
TaaI ACNGT 2 cut(s) 391, 667
TaiI ACGT 2 cut(s) 202, 376
TaqI TCGA 2 cut(s) 148, 697
TasI AATT 7 cut(s) 166, 249, 585, 628, 737, 823, 977
TatI WGTACW 2 cut(s) 174, 614
TfiI GAWTC 3 cut(s) 44, 150, 563
Tru1I TTAA 4 cut(s) 65, 123, 428, 987
Tru9I TTAA 4 cut(s) 65, 123, 428, 987
TscAI CASTG 2 cut(s) 396, 610
TseFI GTSAC 2 cut(s) 391, 601
TseI GCWGC 4 cut(s) 301, 470, 733, 784
Tsp45I GTSAC 2 cut(s) 391, 601
TspDTI ATGAA 5 cut(s) 12, 339, 410, 427, 802
TspRI CASTG 2 cut(s) 396, 610
VpaK11BI GGWCC 1 cut(s) 36
XapI RAATTY 4 cut(s) 166, 628, 823, 977
XceI RCATGY 1 cut(s) 279
XspI CTAG 4 cut(s) 576, 714, 725, 983
ZraI GACGTC 1 cut(s) 374
ZrmI AGTACT 1 cut(s) 176
Zsp2I ATGCAT 1 cut(s) 444
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.