FvH4_6g02392
RLK Family

cysteine-rich RLK (RECEPTOR-like protein kinase) 8

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000071
Physical Location & Seq
Reverse (-)
1385365 .. 1386851
1487 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g02392.t1

Sequence Viewer

Length: 1284 bp
ATGGACACTGAATTACAGGCTCTTCAGGCCAATGGTACTTGGTCCCTCACTAAACTCCCGGCTGGCAAAACACCAATTGGCTGCAAATGGGTGTATAAGGTTAAACACCGTTCCGATGGCACCATTGAGAGATACAAAGCTCGCCTCGTCGCAAAGGGTTTCACTCAGCTAGAAGGCATTGACTATCATGATACTTTTTCGCCAACAGCCAAGATCATCACCGTCCGTTGTCTGCTTACATTGGCTGCAGCCAAGGGTTGGTCATTTCACCAAATGGATGTCAACAATGCCTTCCTTCACGGCGACTTACAGGAAGAAATTTATATGTCCCCGCCGCCAGGGCTTCGGCGACAGGGGGAGGAAGATTTAGTGTGTCGCCTTCACAAGTCATTGTATGGTCTGAAGCAAGCCTCTCGCCAATGGTTCGCCAAGTTTTCTGAGGCTATTCGTTCTGCCGGTTATGCACAGTCCCGTGCAGACTACTCTCTATTCACCAGAAAACAAGGCAAGTCCTTTACTATCCTCCTGATATACGTTGATGATATATTGATTACTGGGAATGATCCTCAAAGTATTCTTGCGACTAAACAATTTCTGCATAGTCATTTTCATATCAAGGATCTTGGAAACTTGAAATACTTTCTTGGCATTGAGGTTTCTTCTTCTAGCAATGGGATTTTCATTTCCCAACGTAAGTATGCATTGGAGATAATTGAAGATGCAGGACTATTGGGGGCAGCACCTGTTGATACACCTATGGAACGAGGATTGAAACTTTCTGATAAGAGTGATGTACTCAAGGACCAAGGTCGCTATAGGAGGTTGATTGGGCAGGTTGTCCGCTTACTAGACGGTCCACTACAGGCTATTGTGTATTTCTTGGATCATCACTGGTTTCTTGGAGATCAAAGCGCCAGAAGACCGTTTCACTTTTCATCAGCGGAAGCAGAATACCGTGCTATGACTGGAACATGTTGTGAGTTGACTTGGCTGCGAAGCCTACTTGGAGATTTAGGCATAGTACATCGAGAACCTGCCTTACTATATTGTGACAACAAAGCAGCGCTGCATATTGCAGCGAATCCCGTCTTTCATGAGCGTACAAGGCATATTGAGATGGATTGCCATTTTATCAGGGACAAAATCCAAGACGGATCTGTTGTTACGAGATTTGTGGGTTCATCACATCAGTTGGCAGACATTCTGACCAAAGCTTTGGGAAAGGAAACTTTCATTCCCATGATACGCAAGTTGGGAGTGCAGGATATCCACTCTCCAACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2 Retrotran_gag_3 Retrotrans_gag

Protein Analysis

428

Amino Acids

48.19

Weight (kDa)

8.9

Isoelectric Point (pI)

46.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_2 PF07727 11 - 254 1.8e-76 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000071)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G23160 AT4G23160
fragaria_vesca FvH4_2g08111 FvH4_2g17332 FvH4_2g18071 FvH4_2g20531 FvH4_2g20842 FvH4_2g20842 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g24231 FvH4_2g24232 FvH4_3g00831 FvH4_3g00831 FvH4_3g03561 FvH4_3g03561 FvH4_3g10282 FvH4_3g18165 FvH4_3g19021 FvH4_3g24071 FvH4_3g33123 FvH4_3g33970 FvH4_3g38851 FvH4_3g39133 FvH4_3g39271 FvH4_4g00981 FvH4_4g08191 FvH4_4g08311 FvH4_4g08311 FvH4_4g08311 FvH4_4g09341 FvH4_4g12550 FvH4_4g12550 FvH4_4g12550 FvH4_4g13391 FvH4_4g14842 FvH4_4g27901 FvH4_5g11561 FvH4_5g15611 FvH4_5g17991 FvH4_5g27871 FvH4_5g29995 FvH4_5g39662 FvH4_6g02392 FvH4_6g12781 FvH4_6g20106 FvH4_6g20106 FvH4_6g20106 FvH4_6g30872 FvH4_6g34901 FvH4_6g35632 FvH4_6g36661 FvH4_6g43795 FvH4_6g44611 FvH4_7g01791 FvH4_7g04041 FvH4_7g12551 FvH4_7g23351
malus_domestica MD00G1134200.v1.1 MD01G1096500.v1.1 MD01G1128200.v1.1 MD02G1250500.v1.1 MD02G1294900.v1.1 MD03G1121800.v1.1 MD04G1021400.v1.1 MD04G1051100.v1.1 MD04G1051300.v1.1 MD04G1099000.v1.1 MD05G1047900.v1.1 MD05G1298000.v1.1 MD06G1064200.v1.1 MD06G1120600.v1.1 MD07G1013900.v1.1 MD09G1226900.v1.1 MD10G1196700.v1.1 MD10G1307000.v1.1 MD10G1338900.v1.1 MD11G1107300.v1.1 MD11G1138300.v1.1 MD11G1236700.v1.1 MD12G1032500.v1.1 MD12G1150100.v1.1 MD12G1247800.v1.1 MD17G1267900.v1.1
pyrus_communis pycom02g03660 pycom02g13370 pycom02g14840 pycom02g18400 pycom02g18880 pycom02g22740 pycom04g08800 pycom04g15770 pycom05g07980 pycom05g19640 pycom06g09360 pycom07g13160 pycom08g11820 pycom08g21740 pycom09g19980 pycom10g04810 pycom10g05420 pycom10g14650 pycom11g03140 pycom11g21550 pycom12g14740 pycom13g01600 pycom13g29510 pycom14g07060 pycom15g01990 pycom15g19850 pycom15g30860 pycom16g15290 pycom16g16250 pycom16g25390 pycom17g17270 pycom520g00070
rosa_chinensis RchiOBHm_Chr1g0316691 RchiOBHm_Chr1g0320751 RchiOBHm_Chr1g0320771 RchiOBHm_Chr1g0322231 RchiOBHm_Chr1g0322861 RchiOBHm_Chr1g0328471 RchiOBHm_Chr1g0333321 RchiOBHm_Chr1g0337871 RchiOBHm_Chr1g0339051 RchiOBHm_Chr1g0349861 RchiOBHm_Chr1g0361951 RchiOBHm_Chr1g0365931 RchiOBHm_Chr1g0365981 RchiOBHm_Chr1g0377711 RchiOBHm_Chr1g0381581 RchiOBHm_Chr1g0382741 RchiOBHm_Chr1g0383501 RchiOBHm_Chr2g0101201 RchiOBHm_Chr2g0113601 RchiOBHm_Chr2g0124031 RchiOBHm_Chr2g0135481 RchiOBHm_Chr2g0148361 RchiOBHm_Chr2g0150101 RchiOBHm_Chr2g0154181 RchiOBHm_Chr2g0156071 RchiOBHm_Chr2g0166521 RchiOBHm_Chr2g0166821 RchiOBHm_Chr3g0448011 RchiOBHm_Chr3g0450941 RchiOBHm_Chr3g0450961 RchiOBHm_Chr3g0451051 RchiOBHm_Chr3g0451721 RchiOBHm_Chr3g0453371 RchiOBHm_Chr3g0454881 RchiOBHm_Chr3g0457421 RchiOBHm_Chr3g0457661 RchiOBHm_Chr3g0460011 RchiOBHm_Chr3g0461531 RchiOBHm_Chr3g0461981 RchiOBHm_Chr3g0463471 RchiOBHm_Chr3g0466641 RchiOBHm_Chr3g0468181 RchiOBHm_Chr3g0483351 RchiOBHm_Chr4g0394001 RchiOBHm_Chr4g0397261 RchiOBHm_Chr4g0404531 RchiOBHm_Chr4g0410841 RchiOBHm_Chr4g0415501 RchiOBHm_Chr4g0425221 RchiOBHm_Chr4g0430811 RchiOBHm_Chr5g0010831 RchiOBHm_Chr5g0016831 RchiOBHm_Chr5g0016851 RchiOBHm_Chr5g0031351 RchiOBHm_Chr5g0032151 RchiOBHm_Chr5g0041201 RchiOBHm_Chr5g0042191 RchiOBHm_Chr5g0064121 RchiOBHm_Chr5g0066601 RchiOBHm_Chr5g0078371 RchiOBHm_Chr5g0079271 RchiOBHm_Chr6g0263751 RchiOBHm_Chr6g0285111 RchiOBHm_Chr6g0298961 RchiOBHm_Chr6g0300481 RchiOBHm_Chr6g0303211 RchiOBHm_Chr7g0192341 RchiOBHm_Chr7g0196171 RchiOBHm_Chr7g0200281 RchiOBHm_Chr7g0200551 RchiOBHm_Chr7g0207611 RchiOBHm_Chr7g0212421 RchiOBHm_Chr7g0214991 RchiOBHm_Chr7g0219211 RchiOBHm_Chr7g0242371
rosa_laevigata RLG00000002389 RLG00000007980
rosa_roxburghii Rroxscaffold_1G00053480 Rroxscaffold_2G00090890 Rroxscaffold_2G00099660 Rroxscaffold_2G00134510 Rroxscaffold_3G00221450 Rroxscaffold_3G00240550 Rroxscaffold_4G00305710 Rroxscaffold_4G00306360 Rroxscaffold_4G00306800 Rroxscaffold_4G00329090 Rroxscaffold_5G00382750 Rroxscaffold_5G00385900 Rroxscaffold_6G00403080 Rroxscaffold_7G00172890 Rroxscaffold_7G00186690
rosa_samantha Rh1DG425600
rosa_wichuraiana Rw0G001640 Rw0G009160 Rw0G010480 Rw0G010520 Rw0G013850 Rw0G017170 Rw0G018520 Rw0G019280 Rw0G022780 Rw1G000360 Rw1G001410 Rw1G001630 Rw1G002100 Rw1G006810 Rw1G010680 Rw1G012700 Rw1G016160 Rw1G022180 Rw1G023580 Rw1G025640 Rw1G026310 Rw1G027230 Rw1G028110 Rw1G034180 Rw2G004990 Rw2G005840 Rw2G007350 Rw2G024730 Rw2G025580 Rw2G026670 Rw2G027210 Rw2G029060 Rw2G031560 Rw2G042190 Rw2G043850 Rw2G045990 Rw2G046130 Rw2G049290 Rw2G049310 Rw2G049790 Rw2G052250 Rw3G004350 Rw3G013100 Rw3G015280 Rw3G015720 Rw3G024630 Rw3G026470 Rw3G027840 Rw3G028960 Rw3G029130 Rw3G029160 Rw4G000280 Rw4G006650 Rw4G008970 Rw4G009310 Rw4G011730 Rw4G012000 Rw4G012610 Rw4G014300 Rw4G014690 Rw4G015190 Rw4G016470 Rw4G020750 Rw4G025060 Rw4G025080 Rw5G005610 Rw5G010380 Rw5G013970 Rw5G015130 Rw5G015250 Rw5G017640 Rw5G019910 Rw5G022410 Rw5G023550 Rw5G029710 Rw5G037650 Rw5G038280 Rw5G038570 Rw5G041550 Rw5G042600 Rw5G043910 Rw5G047850 Rw5G048200 Rw5G049920 Rw6G000260 Rw6G000530 Rw6G001710 Rw6G005090 Rw6G006730 Rw6G009310 Rw6G010950 Rw6G011630 Rw6G012080 Rw6G012750 Rw6G015970 Rw6G020700 Rw6G024350 Rw7G008540 Rw7G016620 Rw7G019400 Rw7G020010 Rw7G024240 Rw7G025630 Rw7G027550 Rw7G027770 Rw7G027960 Rw7G028450 Rw7G031280 Rw7G031970 Rw7G032180 Rw7G033590 Rw7G033720 Rw7G033890 Rw7G041800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 823, 1042
AccB1I GGYRCC 1 cut(s) 119
AccB7I CCANNNNNTGG 1 cut(s) 258
AciI CCGC 4 cut(s) 332, 335, 841, 941
AclWI GGATC 4 cut(s) 557, 627, 891, 1162
AcsI RAATTY 1 cut(s) 318
AcuI CTGAAG 2 cut(s) 8, 422
AfaI GTAC 4 cut(s) 37, 795, 1023, 1102
AfeI AGCGCT 1 cut(s) 1065
AfiI CCNNNNNNNGG 2 cut(s) 258, 338
AflIII ACRYGT 1 cut(s) 971
AgsI TTSAA 3 cut(s) 634, 716, 772
AjnI CCWGG 1 cut(s) 337
AluBI AGCT 3 cut(s) 140, 169, 1214
AluI AGCT 3 cut(s) 140, 169, 1214
AlwI GGATC 4 cut(s) 557, 627, 891, 1162
AlwNI CAGNNNCTG 1 cut(s) 743
Aor51HI AGCGCT 1 cut(s) 1065
AoxI GGCC 1 cut(s) 27
ApeKI GCWGC 8 cut(s) 81, 245, 248, 737, 991, 1061, 1066, 1076
ApoI RAATTY 1 cut(s) 318
ArsI GACNNNNNNTTYG 2 cut(s) 1198, 1230
AspLEI GCGC 2 cut(s) 914, 1066
AspS9I GGNCC 3 cut(s) 42, 802, 854
AsuC2I CCSGG 1 cut(s) 59
AsuHPI GGTGA 3 cut(s) 211, 260, 484
AvaII GGWCC 3 cut(s) 42, 802, 854
BaeI ACNNNNGTAYC 2 cut(s) 1235, 1268
BanI GGYRCC 1 cut(s) 119
BbsI GAAGAC 1 cut(s) 925
BbvI GCAGC 8 cut(s) 68, 232, 260, 749, 978, 1053, 1073, 1088
BccI CCATC 2 cut(s) 110, 1111
BceAI ACGGC 1 cut(s) 316
BcgI CGANNNNNNTGC 2 cut(s) 395, 429
BciT130I CCWGG 1 cut(s) 339
BcnI CCSGG 1 cut(s) 59
BfaI CTAG 3 cut(s) 170, 666, 848
BfmI CTRYAG 3 cut(s) 246, 814, 860
BfoI RGCGCY 2 cut(s) 915, 1067
BfuAI ACCTGC 2 cut(s) 823, 1042
BglI GCCNNNNNGGC 1 cut(s) 340
BisI GCNGC 9 cut(s) 82, 246, 249, 335, 738, 992, 1062, 1067, 1077
BlsI GCNGC 9 cut(s) 83, 247, 250, 336, 739, 993, 1063, 1068, 1078
Bme1390I CCNGG 2 cut(s) 59, 339
Bme18I GGWCC 3 cut(s) 42, 802, 854
BmgT120I GGNCC 3 cut(s) 42, 802, 854
BmiI GGNNCC 2 cut(s) 44, 121
BmrFI CCNGG 2 cut(s) 59, 339
BmrI ACTGGG 1 cut(s) 564
BmsI GCATC 1 cut(s) 709
BmuI ACTGGG 1 cut(s) 564
BoxI GACNNNNGTC 1 cut(s) 807
BpiI GAAGAC 1 cut(s) 925
BpuEI CTTGAG 1 cut(s) 782
BpuMI CCSGG 1 cut(s) 59
BsaJI CCNNGG 3 cut(s) 252, 338, 805
Bsc4I CCNNNNNNNGG 2 cut(s) 258, 338
Bse118I RCCGGY 1 cut(s) 455
Bse1I ACTGG 3 cut(s) 559, 896, 970
Bse3DI GCAATG 1 cut(s) 676
BseBI CCWGG 1 cut(s) 339
BseDI CCNNGG 3 cut(s) 252, 338, 805
BseGI GGATG 1 cut(s) 283
BseLI CCNNNNNNNGG 2 cut(s) 258, 338
BseMI GCAATG 1 cut(s) 676
BseMII CTCAG 2 cut(s) 179, 429
BseNI ACTGG 3 cut(s) 559, 896, 970
BseXI GCAGC 8 cut(s) 68, 232, 260, 749, 978, 1053, 1073, 1088
BsgI GTGCAG 2 cut(s) 495, 1280
BshFI GGCC 1 cut(s) 29
BshNI GGYRCC 1 cut(s) 119
BsiSI CCGG 2 cut(s) 59, 456
BslFI GGGAC 4 cut(s) 28, 313, 454, 1151
BslI CCNNNNNNNGG 2 cut(s) 258, 338
BsmFI GGGAC 4 cut(s) 28, 313, 454, 1151
BsnI GGCC 1 cut(s) 29
Bsp143I GATC 6 cut(s) 213, 562, 619, 883, 904, 1154
BspACI CCGC 4 cut(s) 332, 335, 841, 941
BspANI GGCC 1 cut(s) 29
BspCNI CTCAG 2 cut(s) 178, 430
BspHI TCATGA 2 cut(s) 187, 1093
BspLI GGNNCC 2 cut(s) 44, 121
BspMAI CTGCAG 1 cut(s) 250
BspMI ACCTGC 2 cut(s) 823, 1042
BspPI GGATC 4 cut(s) 557, 627, 891, 1162
BspQI GCTCTTC 1 cut(s) 27
BspT107I GGYRCC 1 cut(s) 119
BsrDI GCAATG 1 cut(s) 676
BsrFI RCCGGY 1 cut(s) 455
BsrI ACTGG 3 cut(s) 559, 896, 970
BssAI RCCGGY 1 cut(s) 455
BssECI CCNNGG 3 cut(s) 252, 338, 805
BssMI GATC 6 cut(s) 213, 562, 619, 883, 904, 1154
BssT1I CCWWGG 2 cut(s) 252, 805
Bst2UI CCWGG 1 cut(s) 339
Bst4CI ACNGT 6 cut(s) 110, 223, 468, 854, 924, 956
Bst6I CTCTTC 1 cut(s) 27
BstC8I GCNNGC 3 cut(s) 64, 142, 408
BstDEI CTNAG 2 cut(s) 165, 438
BstF5I GGATG 1 cut(s) 283
BstH2I RGCGCY 2 cut(s) 915, 1067
BstHHI GCGC 2 cut(s) 914, 1066
BstKTI GATC 6 cut(s) 216, 565, 622, 886, 907, 1157
BstMBI GATC 6 cut(s) 213, 562, 619, 883, 904, 1154
BstMWI GCNNNNNNNGC 4 cut(s) 26, 340, 461, 1105
BstNI CCWGG 1 cut(s) 339
BstNSI RCATGY 1 cut(s) 975
BstPAI GACNNNNGTC 1 cut(s) 807
BstSCI CCNGG 2 cut(s) 57, 337
BstSFI CTRYAG 3 cut(s) 246, 814, 860
BstV1I GCAGC 8 cut(s) 68, 232, 260, 749, 978, 1053, 1073, 1088
BstV2I GAAGAC 1 cut(s) 925
BstX2I RGATCY 2 cut(s) 619, 1154
BstXI CCANNNNNNTGG 1 cut(s) 1216
BstYI RGATCY 2 cut(s) 619, 1154
BsuRI GGCC 1 cut(s) 29
BtsCI GGATG 1 cut(s) 283
BtsIMutI CAGTG 2 cut(s) 6, 889
BveI ACCTGC 2 cut(s) 823, 1042
Cac8I GCNNGC 3 cut(s) 64, 142, 408
CaiI CAGNNNCTG 1 cut(s) 743
CciI TCATGA 2 cut(s) 187, 1093
CfoI GCGC 2 cut(s) 914, 1066
Cfr10I RCCGGY 1 cut(s) 455
Cfr13I GGNCC 3 cut(s) 42, 802, 854
Csp6I GTAC 4 cut(s) 36, 794, 1022, 1101
CviAII CATG 4 cut(s) 188, 972, 1094, 1240
CviQI GTAC 4 cut(s) 36, 794, 1022, 1101
DdeI CTNAG 2 cut(s) 165, 438
DpnI GATC 6 cut(s) 215, 564, 621, 885, 906, 1156
DpnII GATC 6 cut(s) 213, 562, 619, 883, 904, 1154
Eam1104I CTCTTC 1 cut(s) 27
EarI CTCTTC 1 cut(s) 27
Eco130I CCWWGG 2 cut(s) 252, 805
Eco32I GATATC 1 cut(s) 1267
Eco47I GGWCC 3 cut(s) 42, 802, 854
Eco47III AGCGCT 1 cut(s) 1065
Eco57I CTGAAG 2 cut(s) 8, 422
EcoRII CCWGG 1 cut(s) 337
EcoRV GATATC 1 cut(s) 1267
EcoT14I CCWWGG 2 cut(s) 252, 805
EcoT22I ATGCAT 1 cut(s) 703
ErhI CCWWGG 2 cut(s) 252, 805
FaeI CATG 4 cut(s) 191, 975, 1097, 1243
FaqI GGGAC 4 cut(s) 28, 313, 454, 1151
FatI CATG 4 cut(s) 187, 971, 1093, 1239
FauI CCCGC 1 cut(s) 339
Fnu4HI GCNGC 9 cut(s) 82, 246, 249, 335, 738, 992, 1062, 1067, 1077
FokI GGATG 1 cut(s) 290
Fsp4HI GCNGC 9 cut(s) 82, 246, 249, 335, 738, 992, 1062, 1067, 1077
FspBI CTAG 3 cut(s) 170, 666, 848
GlaI GCGC 2 cut(s) 913, 1065
GluI GCNGC 9 cut(s) 82, 246, 249, 335, 738, 992, 1062, 1067, 1077
HaeII RGCGCY 2 cut(s) 915, 1067
HaeIII GGCC 1 cut(s) 29
HapII CCGG 2 cut(s) 59, 456
HhaI GCGC 2 cut(s) 914, 1066
Hin1II CATG 4 cut(s) 191, 975, 1097, 1243
Hin6I GCGC 2 cut(s) 912, 1064
HinP1I GCGC 2 cut(s) 912, 1064
HincII GTYRAC 2 cut(s) 283, 984
HindII GTYRAC 2 cut(s) 283, 984
HindIII AAGCTT 1 cut(s) 1212
HinfI GANTC 1 cut(s) 1081
HpaII CCGG 2 cut(s) 59, 456
HphI GGTGA 3 cut(s) 211, 260, 484
Hpy166II GTNNAC 3 cut(s) 283, 857, 984
Hpy188I TCNGA 5 cut(s) 115, 402, 439, 781, 1206
Hpy188III TCNNGA 4 cut(s) 188, 526, 1028, 1094
Hpy8I GTNNAC 3 cut(s) 283, 857, 984
Hpy99I CGWCG 1 cut(s) 152
HpyAV CCTTC 4 cut(s) 167, 301, 305, 389
HpyCH4III ACNGT 6 cut(s) 110, 223, 468, 854, 924, 956
HpyCH4IV ACGT 2 cut(s) 534, 691
HpyF10VI GCNNNNNNNGC 4 cut(s) 26, 340, 461, 1105
HpyF3I CTNAG 2 cut(s) 165, 438
HpySE526I ACGT 2 cut(s) 534, 691
Hsp92II CATG 4 cut(s) 191, 975, 1097, 1243
HspAI GCGC 2 cut(s) 912, 1064
Kzo9I GATC 6 cut(s) 213, 562, 619, 883, 904, 1154
LguI GCTCTTC 1 cut(s) 27
Lsp1109I GCAGC 8 cut(s) 68, 232, 260, 749, 978, 1053, 1073, 1088
LweI GCATC 1 cut(s) 709
MaeI CTAG 3 cut(s) 170, 666, 848
MaeII ACGT 2 cut(s) 534, 691
MaeIII GTNAC 2 cut(s) 1049, 1162
MalI GATC 6 cut(s) 215, 564, 621, 885, 906, 1156
MboI GATC 6 cut(s) 213, 562, 619, 883, 904, 1154
MboII GAAGA 7 cut(s) 14, 326, 374, 651, 654, 728, 930
MfeI CAATTG 1 cut(s) 75
MflI RGATCY 2 cut(s) 619, 1154
MluCI AATT 5 cut(s) 11, 75, 318, 590, 711
Mph1103I ATGCAT 1 cut(s) 703
MseI TTAA 1 cut(s) 102
MslI CAYNNNNRTG 1 cut(s) 1238
MspA1I CMGCKG 1 cut(s) 941
MspI CCGG 2 cut(s) 59, 456
MspR9I CCNGG 2 cut(s) 59, 339
MunI CAATTG 1 cut(s) 75
MvaI CCWGG 1 cut(s) 339
MwoI GCNNNNNNNGC 4 cut(s) 26, 340, 461, 1105
NciI CCSGG 1 cut(s) 59
NdeII GATC 6 cut(s) 213, 562, 619, 883, 904, 1154
NlaIII CATG 4 cut(s) 191, 975, 1097, 1243
NlaIV GGNNCC 2 cut(s) 44, 121
NmuCI GTSAC 1 cut(s) 1049
NsiI ATGCAT 1 cut(s) 703
NspI RCATGY 1 cut(s) 975
PagI TCATGA 2 cut(s) 187, 1093
PciI ACATGT 1 cut(s) 971
PciSI GCTCTTC 1 cut(s) 27
PfeI GAWTC 1 cut(s) 1081
PflMI CCANNNNNTGG 1 cut(s) 258
PkrI GCNGC 9 cut(s) 83, 247, 250, 336, 739, 993, 1063, 1068, 1078
PscI ACATGT 1 cut(s) 971
PshAI GACNNNNGTC 1 cut(s) 807
Psp6I CCWGG 1 cut(s) 337
PspGI CCWGG 1 cut(s) 337
PspN4I GGNNCC 2 cut(s) 44, 121
PspPI GGNCC 3 cut(s) 42, 802, 854
PsrI GAACNNNNNNTAC 2 cut(s) 1023, 1055
PstI CTGCAG 1 cut(s) 250
PstNI CAGNNNCTG 1 cut(s) 743
PsuI RGATCY 2 cut(s) 619, 1154
RsaI GTAC 4 cut(s) 37, 795, 1023, 1102
RsaNI GTAC 4 cut(s) 36, 794, 1022, 1101
RseI CAYNNNNRTG 1 cut(s) 1238
SapI GCTCTTC 1 cut(s) 27
SaqAI TTAA 1 cut(s) 102
SatI GCNGC 9 cut(s) 82, 246, 249, 335, 738, 992, 1062, 1067, 1077
Sau3AI GATC 6 cut(s) 213, 562, 619, 883, 904, 1154
Sau96I GGNCC 3 cut(s) 42, 802, 854
ScrFI CCNGG 2 cut(s) 59, 339
SfaNI GCATC 1 cut(s) 709
SfcI CTRYAG 3 cut(s) 246, 814, 860
SinI GGWCC 3 cut(s) 42, 802, 854
SmiMI CAYNNNNRTG 1 cut(s) 1238
SmlI CTYRAG 1 cut(s) 797
SmoI CTYRAG 1 cut(s) 797
Sse9I AATT 5 cut(s) 11, 75, 318, 590, 711
SsiI CCGC 4 cut(s) 332, 335, 841, 941
SspMI CTAG 3 cut(s) 170, 666, 848
StyD4I CCNGG 2 cut(s) 57, 337
StyI CCWWGG 2 cut(s) 252, 805
TaaI ACNGT 6 cut(s) 110, 223, 468, 854, 924, 956
TaiI ACGT 2 cut(s) 537, 694
TaqI TCGA 1 cut(s) 1027
TasI AATT 5 cut(s) 11, 75, 318, 590, 711
TatI WGTACW 2 cut(s) 793, 1021
TauI GCSGC 1 cut(s) 337
TfiI GAWTC 1 cut(s) 1081
Tru1I TTAA 1 cut(s) 102
Tru9I TTAA 1 cut(s) 102
TscAI CASTG 2 cut(s) 13, 896
TseFI GTSAC 1 cut(s) 1049
TseI GCWGC 8 cut(s) 81, 245, 248, 737, 991, 1061, 1066, 1076
Tsp45I GTSAC 1 cut(s) 1049
TspDTI ATGAA 6 cut(s) 599, 670, 924, 1082, 1170, 1222
TspGWI ACGGA 2 cut(s) 215, 1167
TspRI CASTG 2 cut(s) 13, 896
Van91I CCANNNNNTGG 1 cut(s) 258
VpaK11BI GGWCC 3 cut(s) 42, 802, 854
XapI RAATTY 1 cut(s) 318
XceI RCATGY 1 cut(s) 975
XspI CTAG 3 cut(s) 170, 666, 848
Zsp2I ATGCAT 1 cut(s) 703
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.