Reverse transcriptase (RNA-dependent DNA polymerase)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_2 | PF07727 | 2 - 102 | 1.5e-17 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 449, 468 |
| AccI | GTMKAC | 1 cut(s) | 482 |
| AcsI | RAATTY | 1 cut(s) | 161 |
| AfaI | GTAC | 1 cut(s) | 440 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 395 |
| AgsI | TTSAA | 4 cut(s) | 134, 190, 209, 411 |
| AjiI | CACGTC | 1 cut(s) | 448 |
| AjnI | CCWGG | 1 cut(s) | 388 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 182, 214 |
| AleI | CACNNNNGTG | 2 cut(s) | 446, 503 |
| AoxI | GGCC | 1 cut(s) | 588 |
| ApoI | RAATTY | 1 cut(s) | 161 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 194 |
| AsuHPI | GGTGA | 2 cut(s) | 125, 322 |
| BciT130I | CCWGG | 1 cut(s) | 390 |
| BfaI | CTAG | 1 cut(s) | 561 |
| BfuAI | ACCTGC | 2 cut(s) | 449, 468 |
| Bme1390I | CCNGG | 1 cut(s) | 390 |
| BmgBI | CACGTC | 1 cut(s) | 448 |
| BmrFI | CCNGG | 1 cut(s) | 390 |
| BmsI | GCATC | 1 cut(s) | 340 |
| BpmI | CTGGAG | 1 cut(s) | 372 |
| BsaJI | CCNNGG | 1 cut(s) | 389 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 395 |
| Bse118I | RCCGGY | 1 cut(s) | 18 |
| BseBI | CCWGG | 1 cut(s) | 390 |
| BseDI | CCNNGG | 1 cut(s) | 389 |
| BseGI | GGATG | 1 cut(s) | 355 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 395 |
| BseRI | GAGGAG | 1 cut(s) | 140 |
| BsgI | GTGCAG | 1 cut(s) | 585 |
| BshFI | GGCC | 1 cut(s) | 590 |
| BsiSI | CCGG | 1 cut(s) | 19 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 395 |
| BsnI | GGCC | 1 cut(s) | 590 |
| Bsp143I | GATC | 2 cut(s) | 34, 472 |
| BspANI | GGCC | 1 cut(s) | 590 |
| BspMI | ACCTGC | 2 cut(s) | 449, 468 |
| BspQI | GCTCTTC | 1 cut(s) | 524 |
| BsrFI | RCCGGY | 1 cut(s) | 18 |
| BssAI | RCCGGY | 1 cut(s) | 18 |
| BssECI | CCNNGG | 1 cut(s) | 389 |
| BssMI | GATC | 2 cut(s) | 34, 472 |
| Bst2UI | CCWGG | 1 cut(s) | 390 |
| Bst4CI | ACNGT | 1 cut(s) | 419 |
| Bst6I | CTCTTC | 1 cut(s) | 524 |
| BstC8I | GCNNGC | 1 cut(s) | 270 |
| BstF5I | GGATG | 1 cut(s) | 355 |
| BstKTI | GATC | 2 cut(s) | 37, 475 |
| BstMBI | GATC | 2 cut(s) | 34, 472 |
| BstNI | CCWGG | 1 cut(s) | 390 |
| BstSCI | CCNGG | 1 cut(s) | 388 |
| BsuRI | GGCC | 1 cut(s) | 590 |
| BtrI | CACGTC | 1 cut(s) | 448 |
| BtsCI | GGATG | 1 cut(s) | 355 |
| BveI | ACCTGC | 2 cut(s) | 449, 468 |
| Cac8I | GCNNGC | 1 cut(s) | 270 |
| Cfr10I | RCCGGY | 1 cut(s) | 18 |
| Csp6I | GTAC | 1 cut(s) | 439 |
| CviAII | CATG | 1 cut(s) | 100 |
| CviJI | RGCY | 4 cut(s) | 15, 492, 554, 590 |
| CviKI_1 | RGCY | 4 cut(s) | 15, 492, 554, 590 |
| CviQI | GTAC | 1 cut(s) | 439 |
| DpnI | GATC | 2 cut(s) | 36, 474 |
| DpnII | GATC | 2 cut(s) | 34, 472 |
| DraI | TTTAAA | 1 cut(s) | 378 |
| Eam1104I | CTCTTC | 1 cut(s) | 524 |
| EarI | CTCTTC | 1 cut(s) | 524 |
| EcoRII | CCWGG | 1 cut(s) | 388 |
| EcoT22I | ATGCAT | 1 cut(s) | 327 |
| FaeI | CATG | 1 cut(s) | 103 |
| FatI | CATG | 1 cut(s) | 99 |
| FauNDI | CATATG | 1 cut(s) | 345 |
| FblI | GTMKAC | 1 cut(s) | 482 |
| FokI | GGATG | 1 cut(s) | 362 |
| FspBI | CTAG | 1 cut(s) | 561 |
| GsuI | CTGGAG | 1 cut(s) | 372 |
| HaeIII | GGCC | 1 cut(s) | 590 |
| HapII | CCGG | 1 cut(s) | 19 |
| Hin1II | CATG | 1 cut(s) | 103 |
| HinfI | GANTC | 5 cut(s) | 130, 241, 290, 313, 340 |
| HpaII | CCGG | 1 cut(s) | 19 |
| HphI | GGTGA | 2 cut(s) | 125, 322 |
| Hpy166II | GTNNAC | 2 cut(s) | 441, 483 |
| Hpy188I | TCNGA | 2 cut(s) | 34, 246 |
| Hpy188III | TCNNGA | 1 cut(s) | 260 |
| Hpy8I | GTNNAC | 2 cut(s) | 441, 483 |
| Hpy99I | CGWCG | 1 cut(s) | 490 |
| HpyAV | CCTTC | 2 cut(s) | 217, 388 |
| HpyCH4III | ACNGT | 1 cut(s) | 419 |
| HpyCH4IV | ACGT | 2 cut(s) | 447, 485 |
| HpyCH4V | TGCA | 2 cut(s) | 325, 566 |
| HpySE526I | ACGT | 2 cut(s) | 447, 485 |
| Hsp92II | CATG | 1 cut(s) | 103 |
| Kzo9I | GATC | 2 cut(s) | 34, 472 |
| LguI | GCTCTTC | 1 cut(s) | 524 |
| LmnI | GCTCC | 1 cut(s) | 391 |
| LpnPI | CCDG | 9 cut(s) | 32, 96, 254, 264, 375, 402, 420, 444, 463 |
| LweI | GCATC | 1 cut(s) | 340 |
| MaeI | CTAG | 1 cut(s) | 561 |
| MaeII | ACGT | 2 cut(s) | 447, 485 |
| MaeIII | GTNAC | 6 cut(s) | 70, 106, 138, 419, 512, 520 |
| MalI | GATC | 2 cut(s) | 36, 474 |
| MboI | GATC | 2 cut(s) | 34, 472 |
| MboII | GAAGA | 3 cut(s) | 16, 259, 541 |
| MluCI | AATT | 5 cut(s) | 9, 28, 161, 184, 204 |
| MlyI | GAGTC | 3 cut(s) | 250, 284, 334 |
| MnlI | CCTC | 2 cut(s) | 118, 575 |
| Mph1103I | ATGCAT | 1 cut(s) | 327 |
| MroXI | GAANNNNTTC | 1 cut(s) | 194 |
| MseI | TTAA | 2 cut(s) | 51, 377 |
| MslI | CAYNNNNRTG | 5 cut(s) | 60, 104, 348, 446, 503 |
| MspI | CCGG | 1 cut(s) | 19 |
| MspR9I | CCNGG | 1 cut(s) | 390 |
| MvaI | CCWGG | 1 cut(s) | 390 |
| NdeI | CATATG | 1 cut(s) | 345 |
| NdeII | GATC | 2 cut(s) | 34, 472 |
| NlaIII | CATG | 1 cut(s) | 103 |
| NmuCI | GTSAC | 2 cut(s) | 70, 106 |
| NsiI | ATGCAT | 1 cut(s) | 327 |
| OliI | CACNNNNGTG | 2 cut(s) | 446, 503 |
| PciSI | GCTCTTC | 1 cut(s) | 524 |
| PdmI | GAANNNNTTC | 1 cut(s) | 194 |
| PfeI | GAWTC | 2 cut(s) | 130, 313 |
| PleI | GAGTC | 3 cut(s) | 249, 284, 334 |
| PpsI | GAGTC | 3 cut(s) | 249, 284, 334 |
| Psp6I | CCWGG | 1 cut(s) | 388 |
| PspGI | CCWGG | 1 cut(s) | 388 |
| RsaI | GTAC | 1 cut(s) | 440 |
| RsaNI | GTAC | 1 cut(s) | 439 |
| RseI | CAYNNNNRTG | 5 cut(s) | 60, 104, 348, 446, 503 |
| SapI | GCTCTTC | 1 cut(s) | 524 |
| SaqAI | TTAA | 2 cut(s) | 51, 377 |
| Sau3AI | GATC | 2 cut(s) | 34, 472 |
| SchI | GAGTC | 3 cut(s) | 250, 284, 334 |
| ScrFI | CCNGG | 1 cut(s) | 390 |
| SfaNI | GCATC | 1 cut(s) | 340 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 60, 104, 348, 446, 503 |
| Sse9I | AATT | 5 cut(s) | 9, 28, 161, 184, 204 |
| SspI | AATATT | 2 cut(s) | 194, 466 |
| SspMI | CTAG | 1 cut(s) | 561 |
| StyD4I | CCNGG | 1 cut(s) | 388 |
| TaaI | ACNGT | 1 cut(s) | 419 |
| TaiI | ACGT | 2 cut(s) | 450, 488 |
| TaqI | TCGA | 1 cut(s) | 261 |
| TasI | AATT | 5 cut(s) | 9, 28, 161, 184, 204 |
| TfiI | GAWTC | 2 cut(s) | 130, 313 |
| Tru1I | TTAA | 2 cut(s) | 51, 377 |
| Tru9I | TTAA | 2 cut(s) | 51, 377 |
| TseFI | GTSAC | 2 cut(s) | 70, 106 |
| Tsp45I | GTSAC | 2 cut(s) | 70, 106 |
| TspDTI | ATGAA | 2 cut(s) | 17, 185 |
| XapI | RAATTY | 1 cut(s) | 161 |
| XmiI | GTMKAC | 1 cut(s) | 482 |
| XmnI | GAANNNNTTC | 1 cut(s) | 194 |
| XspI | CTAG | 1 cut(s) | 561 |
| Zsp2I | ATGCAT | 1 cut(s) | 327 |