Reverse transcriptase (RNA-dependent DNA polymerase)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_2 | PF07727 | 2 - 63 | 2.8e-09 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 37, 170 |
| AcsI | RAATTY | 4 cut(s) | 17, 80, 193, 478 |
| AdeI | CACNNNGTG | 1 cut(s) | 836 |
| AfaI | GTAC | 3 cut(s) | 352, 694, 768 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 546 |
| AgsI | TTSAA | 3 cut(s) | 61, 80, 229 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 53, 85 |
| AluBI | AGCT | 2 cut(s) | 656, 743 |
| AluI | AGCT | 2 cut(s) | 656, 743 |
| Alw21I | GWGCWC | 1 cut(s) | 166 |
| Alw26I | GTCTC | 4 cut(s) | 117, 431, 523, 616 |
| ApeKI | GCWGC | 2 cut(s) | 320, 653 |
| ApoI | RAATTY | 4 cut(s) | 17, 80, 193, 478 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 21, 65 |
| BbsI | GAAGAC | 1 cut(s) | 460 |
| Bbv12I | GWGCWC | 1 cut(s) | 166 |
| BbvI | GCAGC | 2 cut(s) | 307, 665 |
| BccI | CCATC | 1 cut(s) | 209 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 281, 315 |
| BcoDI | GTCTC | 4 cut(s) | 117, 431, 523, 616 |
| BfaI | CTAG | 4 cut(s) | 158, 240, 522, 785 |
| BisI | GCNGC | 2 cut(s) | 321, 654 |
| BlsI | GCNGC | 2 cut(s) | 322, 655 |
| BmsI | GCATC | 4 cut(s) | 301, 307, 419, 631 |
| BpiI | GAAGAC | 1 cut(s) | 460 |
| BsaAI | YACGTR | 1 cut(s) | 836 |
| BsaJI | CCNNGG | 4 cut(s) | 49, 183, 472, 807 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 546 |
| Bse3DI | GCAATG | 1 cut(s) | 558 |
| BseDI | CCNNGG | 4 cut(s) | 49, 183, 472, 807 |
| BseGI | GGATG | 2 cut(s) | 322, 622 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 546 |
| BseMI | GCAATG | 1 cut(s) | 558 |
| BseMII | CTCAG | 2 cut(s) | 349, 426 |
| BseXI | GCAGC | 2 cut(s) | 307, 665 |
| BsiHKAI | GWGCWC | 1 cut(s) | 166 |
| BslFI | GGGAC | 1 cut(s) | 741 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 546 |
| BsmAI | GTCTC | 4 cut(s) | 117, 431, 523, 616 |
| BsmFI | GGGAC | 1 cut(s) | 741 |
| Bsp1286I | GDGCHC | 1 cut(s) | 166 |
| Bsp143I | GATC | 6 cut(s) | 255, 446, 524, 601, 817, 856 |
| Bsp19I | CCATGG | 1 cut(s) | 183 |
| BspACI | CCGC | 2 cut(s) | 37, 170 |
| BspCNI | CTCAG | 2 cut(s) | 348, 427 |
| BspHI | TCATGA | 1 cut(s) | 853 |
| BsrDI | GCAATG | 1 cut(s) | 558 |
| BssECI | CCNNGG | 4 cut(s) | 49, 183, 472, 807 |
| BssMI | GATC | 6 cut(s) | 255, 446, 524, 601, 817, 856 |
| BssT1I | CCWWGG | 4 cut(s) | 49, 183, 472, 807 |
| BstBAI | YACGTR | 1 cut(s) | 836 |
| BstC8I | GCNNGC | 4 cut(s) | 166, 170, 174, 741 |
| BstDEI | CTNAG | 4 cut(s) | 335, 435, 501, 568 |
| BstDSI | CCRYGG | 1 cut(s) | 183 |
| BstF5I | GGATG | 2 cut(s) | 322, 622 |
| BstKTI | GATC | 6 cut(s) | 258, 449, 527, 604, 820, 859 |
| BstMAI | GTCTC | 4 cut(s) | 117, 431, 523, 616 |
| BstMBI | GATC | 6 cut(s) | 255, 446, 524, 601, 817, 856 |
| BstNSI | RCATGY | 2 cut(s) | 176, 567 |
| BstV1I | GCAGC | 2 cut(s) | 307, 665 |
| BstV2I | GAAGAC | 1 cut(s) | 460 |
| BtgI | CCRYGG | 1 cut(s) | 183 |
| BtsCI | GGATG | 2 cut(s) | 322, 622 |
| Cac8I | GCNNGC | 4 cut(s) | 166, 170, 174, 741 |
| CciI | TCATGA | 1 cut(s) | 853 |
| CseI | GACGC | 1 cut(s) | 454 |
| Csp6I | GTAC | 3 cut(s) | 351, 693, 767 |
| CviJI | RGCY | 9 cut(s) | 253, 298, 404, 539, 557, 583, 656, 743, 806 |
| CviKI_1 | RGCY | 9 cut(s) | 253, 298, 404, 539, 557, 583, 656, 743, 806 |
| CviQI | GTAC | 3 cut(s) | 351, 693, 767 |
| DdeI | CTNAG | 4 cut(s) | 335, 435, 501, 568 |
| DpnI | GATC | 6 cut(s) | 257, 448, 526, 603, 819, 858 |
| DpnII | GATC | 6 cut(s) | 255, 446, 524, 601, 817, 856 |
| DraIII | CACNNNGTG | 1 cut(s) | 836 |
| Eco130I | CCWWGG | 4 cut(s) | 49, 183, 472, 807 |
| Eco32I | GATATC | 1 cut(s) | 136 |
| EcoRI | GAATTC | 1 cut(s) | 80 |
| EcoRV | GATATC | 1 cut(s) | 136 |
| EcoT14I | CCWWGG | 4 cut(s) | 49, 183, 472, 807 |
| EcoT22I | ATGCAT | 1 cut(s) | 294 |
| ErhI | CCWWGG | 4 cut(s) | 49, 183, 472, 807 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 53, 85 |
| FaqI | GGGAC | 1 cut(s) | 741 |
| FauI | CCCGC | 1 cut(s) | 177 |
| FauNDI | CATATG | 1 cut(s) | 763 |
| Fnu4HI | GCNGC | 2 cut(s) | 321, 654 |
| FokI | GGATG | 2 cut(s) | 329, 609 |
| Fsp4HI | GCNGC | 2 cut(s) | 321, 654 |
| FspBI | CTAG | 4 cut(s) | 158, 240, 522, 785 |
| GluI | GCNGC | 2 cut(s) | 321, 654 |
| HgaI | GACGC | 1 cut(s) | 454 |
| HinfI | GANTC | 4 cut(s) | 9, 146, 330, 413 |
| Hpy188I | TCNGA | 3 cut(s) | 338, 418, 828 |
| Hpy188III | TCNNGA | 4 cut(s) | 150, 259, 522, 854 |
| HpyAV | CCTTC | 1 cut(s) | 243 |
| HpyCH4IV | ACGT | 4 cut(s) | 88, 586, 691, 835 |
| HpyCH4V | TGCA | 7 cut(s) | 128, 142, 292, 598, 622, 661, 739 |
| HpyF3I | CTNAG | 4 cut(s) | 335, 435, 501, 568 |
| HpySE526I | ACGT | 4 cut(s) | 88, 586, 691, 835 |
| Kzo9I | GATC | 6 cut(s) | 255, 446, 524, 601, 817, 856 |
| LmnI | GCTCC | 2 cut(s) | 4, 218 |
| LpnPI | CCDG | 8 cut(s) | 135, 342, 410, 441, 447, 635, 690, 729 |
| Lsp1109I | GCAGC | 2 cut(s) | 307, 665 |
| LweI | GCATC | 4 cut(s) | 301, 307, 419, 631 |
| MaeI | CTAG | 4 cut(s) | 158, 240, 522, 785 |
| MaeII | ACGT | 4 cut(s) | 88, 586, 691, 835 |
| MaeIII | GTNAC | 1 cut(s) | 451 |
| MalI | GATC | 6 cut(s) | 257, 448, 526, 603, 819, 858 |
| MboI | GATC | 6 cut(s) | 255, 446, 524, 601, 817, 856 |
| MboII | GAAGA | 3 cut(s) | 14, 438, 460 |
| MhlI | GDGCHC | 1 cut(s) | 166 |
| MluCI | AATT | 8 cut(s) | 17, 80, 193, 267, 284, 478, 572, 821 |
| MlyI | GAGTC | 2 cut(s) | 3, 339 |
| MmeI | TCCRAC | 1 cut(s) | 805 |
| MnlI | CCTC | 4 cut(s) | 309, 318, 344, 769 |
| Mph1103I | ATGCAT | 1 cut(s) | 294 |
| MroXI | GAANNNNTTC | 2 cut(s) | 21, 65 |
| MseI | TTAA | 3 cut(s) | 27, 197, 345 |
| MslI | CAYNNNNRTG | 2 cut(s) | 107, 315 |
| NcoI | CCATGG | 1 cut(s) | 183 |
| NdeI | CATATG | 1 cut(s) | 763 |
| NdeII | GATC | 6 cut(s) | 255, 446, 524, 601, 817, 856 |
| NsiI | ATGCAT | 1 cut(s) | 294 |
| NspI | RCATGY | 2 cut(s) | 176, 567 |
| PaeI | GCATGC | 1 cut(s) | 176 |
| PagI | TCATGA | 1 cut(s) | 853 |
| PdmI | GAANNNNTTC | 2 cut(s) | 21, 65 |
| PfeI | GAWTC | 2 cut(s) | 146, 413 |
| PkrI | GCNGC | 2 cut(s) | 322, 655 |
| PleI | GAGTC | 2 cut(s) | 3, 338 |
| PpsI | GAGTC | 2 cut(s) | 3, 338 |
| Ppu21I | YACGTR | 1 cut(s) | 836 |
| RsaI | GTAC | 3 cut(s) | 352, 694, 768 |
| RsaNI | GTAC | 3 cut(s) | 351, 693, 767 |
| RseI | CAYNNNNRTG | 2 cut(s) | 107, 315 |
| SaqAI | TTAA | 3 cut(s) | 27, 197, 345 |
| SatI | GCNGC | 2 cut(s) | 321, 654 |
| Sau3AI | GATC | 6 cut(s) | 255, 446, 524, 601, 817, 856 |
| SchI | GAGTC | 2 cut(s) | 3, 339 |
| SduI | GDGCHC | 1 cut(s) | 166 |
| SfaNI | GCATC | 4 cut(s) | 301, 307, 419, 631 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 107, 315 |
| SmlI | CTYRAG | 1 cut(s) | 11 |
| SmoI | CTYRAG | 1 cut(s) | 11 |
| SphI | GCATGC | 1 cut(s) | 176 |
| Sse9I | AATT | 8 cut(s) | 17, 80, 193, 267, 284, 478, 572, 821 |
| SsiI | CCGC | 2 cut(s) | 37, 170 |
| SspMI | CTAG | 4 cut(s) | 158, 240, 522, 785 |
| StyI | CCWWGG | 4 cut(s) | 49, 183, 472, 807 |
| TaiI | ACGT | 4 cut(s) | 91, 589, 694, 838 |
| TaqI | TCGA | 1 cut(s) | 301 |
| TasI | AATT | 8 cut(s) | 17, 80, 193, 267, 284, 478, 572, 821 |
| TfiI | GAWTC | 2 cut(s) | 146, 413 |
| Tru1I | TTAA | 3 cut(s) | 27, 197, 345 |
| Tru9I | TTAA | 3 cut(s) | 27, 197, 345 |
| TseI | GCWGC | 2 cut(s) | 320, 653 |
| TspDTI | ATGAA | 4 cut(s) | 56, 277, 702, 842 |
| XapI | RAATTY | 4 cut(s) | 17, 80, 193, 478 |
| XbaI | TCTAGA | 1 cut(s) | 521 |
| XceI | RCATGY | 2 cut(s) | 176, 567 |
| XmnI | GAANNNNTTC | 2 cut(s) | 21, 65 |
| XspI | CTAG | 4 cut(s) | 158, 240, 522, 785 |
| Zsp2I | ATGCAT | 1 cut(s) | 294 |