Reverse transcriptase (RNA-dependent DNA polymerase)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_2 | PF07727 | 30 - 109 | 3.9e-13 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 451 |
| AccI | GTMKAC | 1 cut(s) | 567 |
| AciI | CCGC | 2 cut(s) | 151, 251 |
| AcoI | YGGCCR | 1 cut(s) | 8 |
| AcsI | RAATTY | 4 cut(s) | 232, 257, 379, 667 |
| AcuI | CTGAAG | 1 cut(s) | 693 |
| AfaI | GTAC | 1 cut(s) | 443 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 451 |
| AflIII | ACRYGT | 2 cut(s) | 135, 705 |
| AgsI | TTSAA | 5 cut(s) | 286, 305, 318, 511, 638 |
| AjiI | CACGTC | 1 cut(s) | 706 |
| AjnI | CCWGG | 1 cut(s) | 79 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 491, 523 |
| AluBI | AGCT | 1 cut(s) | 490 |
| AluI | AGCT | 1 cut(s) | 490 |
| Alw26I | GTCTC | 2 cut(s) | 148, 515 |
| AoxI | GGCC | 1 cut(s) | 8 |
| ApoI | RAATTY | 4 cut(s) | 232, 257, 379, 667 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 290 |
| AsuHPI | GGTGA | 2 cut(s) | 290, 338 |
| BalI | TGGCCA | 1 cut(s) | 10 |
| BciT130I | CCWGG | 1 cut(s) | 81 |
| BclI | TGATCA | 1 cut(s) | 735 |
| BcoDI | GTCTC | 2 cut(s) | 148, 515 |
| Bme1390I | CCNGG | 1 cut(s) | 81 |
| BmgBI | CACGTC | 1 cut(s) | 706 |
| BmrFI | CCNGG | 1 cut(s) | 81 |
| BmsI | GCATC | 1 cut(s) | 253 |
| BpmI | CTGGAG | 1 cut(s) | 228 |
| Bpu10I | CCTNAGC | 1 cut(s) | 432 |
| BpuEI | CTTGAG | 2 cut(s) | 75, 317 |
| BsaJI | CCNNGG | 2 cut(s) | 80, 445 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 451 |
| Bse1I | ACTGG | 3 cut(s) | 11, 211, 575 |
| BseBI | CCWGG | 1 cut(s) | 81 |
| BseDI | CCNNGG | 2 cut(s) | 80, 445 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 451 |
| BseNI | ACTGG | 3 cut(s) | 11, 211, 575 |
| BshFI | GGCC | 1 cut(s) | 10 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 451 |
| BsmAI | GTCTC | 2 cut(s) | 148, 515 |
| BsnI | GGCC | 1 cut(s) | 10 |
| Bsp143I | GATC | 1 cut(s) | 735 |
| BspACI | CCGC | 2 cut(s) | 151, 251 |
| BspANI | GGCC | 1 cut(s) | 10 |
| BspHI | TCATGA | 2 cut(s) | 96, 700 |
| BspQI | GCTCTTC | 1 cut(s) | 669 |
| BsrI | ACTGG | 3 cut(s) | 11, 211, 575 |
| BssECI | CCNNGG | 2 cut(s) | 80, 445 |
| BssMI | GATC | 1 cut(s) | 735 |
| BssT1I | CCWWGG | 1 cut(s) | 445 |
| Bst2UI | CCWGG | 1 cut(s) | 81 |
| Bst4CI | ACNGT | 1 cut(s) | 21 |
| Bst6I | CTCTTC | 1 cut(s) | 669 |
| BstC8I | GCNNGC | 1 cut(s) | 488 |
| BstDEI | CTNAG | 2 cut(s) | 432, 438 |
| BstKTI | GATC | 1 cut(s) | 738 |
| BstMAI | GTCTC | 2 cut(s) | 148, 515 |
| BstMBI | GATC | 1 cut(s) | 735 |
| BstNI | CCWGG | 1 cut(s) | 81 |
| BstNSI | RCATGY | 2 cut(s) | 602, 751 |
| BstSCI | CCNGG | 1 cut(s) | 79 |
| BsuRI | GGCC | 1 cut(s) | 10 |
| BtrI | CACGTC | 1 cut(s) | 706 |
| BtsIMutI | CAGTG | 3 cut(s) | 204, 582, 731 |
| Cac8I | GCNNGC | 1 cut(s) | 488 |
| CciI | TCATGA | 2 cut(s) | 96, 700 |
| Csp6I | GTAC | 1 cut(s) | 442 |
| CviAII | CATG | 8 cut(s) | 47, 67, 97, 196, 390, 599, 701, 748 |
| CviJI | RGCY | 4 cut(s) | 10, 357, 437, 490 |
| CviKI_1 | RGCY | 4 cut(s) | 10, 357, 437, 490 |
| CviQI | GTAC | 1 cut(s) | 442 |
| DdeI | CTNAG | 2 cut(s) | 432, 438 |
| DpnI | GATC | 1 cut(s) | 737 |
| DpnII | GATC | 1 cut(s) | 735 |
| EaeI | YGGCCR | 1 cut(s) | 8 |
| Eam1104I | CTCTTC | 1 cut(s) | 669 |
| EarI | CTCTTC | 1 cut(s) | 669 |
| Eco130I | CCWWGG | 1 cut(s) | 445 |
| Eco32I | GATATC | 2 cut(s) | 113, 757 |
| Eco57I | CTGAAG | 1 cut(s) | 693 |
| EcoRII | CCWGG | 1 cut(s) | 79 |
| EcoRV | GATATC | 2 cut(s) | 113, 757 |
| EcoT14I | CCWWGG | 1 cut(s) | 445 |
| ErhI | CCWWGG | 1 cut(s) | 445 |
| FaeI | CATG | 8 cut(s) | 50, 70, 100, 199, 393, 602, 704, 751 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 231, 263, 618, 650 |
| FatI | CATG | 8 cut(s) | 46, 66, 96, 195, 389, 598, 700, 747 |
| FbaI | TGATCA | 1 cut(s) | 735 |
| FblI | GTMKAC | 1 cut(s) | 567 |
| GsuI | CTGGAG | 1 cut(s) | 228 |
| HaeIII | GGCC | 1 cut(s) | 10 |
| Hin1II | CATG | 8 cut(s) | 50, 70, 100, 199, 393, 602, 704, 751 |
| HindIII | AAGCTT | 1 cut(s) | 488 |
| HinfI | GANTC | 1 cut(s) | 728 |
| HphI | GGTGA | 2 cut(s) | 290, 338 |
| Hpy166II | GTNNAC | 2 cut(s) | 87, 568 |
| Hpy188I | TCNGA | 1 cut(s) | 673 |
| Hpy188III | TCNNGA | 3 cut(s) | 56, 97, 701 |
| Hpy8I | GTNNAC | 2 cut(s) | 87, 568 |
| HpyAV | CCTTC | 2 cut(s) | 53, 511 |
| HpyCH4III | ACNGT | 1 cut(s) | 21 |
| HpyCH4IV | ACGT | 2 cut(s) | 137, 705 |
| HpyCH4V | TGCA | 3 cut(s) | 238, 554, 580 |
| HpyF3I | CTNAG | 2 cut(s) | 432, 438 |
| HpySE526I | ACGT | 2 cut(s) | 137, 705 |
| Hsp92II | CATG | 8 cut(s) | 50, 70, 100, 199, 393, 602, 704, 751 |
| Ksp22I | TGATCA | 1 cut(s) | 735 |
| Kzo9I | GATC | 1 cut(s) | 735 |
| LguI | GCTCTTC | 1 cut(s) | 669 |
| LpnPI | CCDG | 8 cut(s) | 41, 66, 93, 161, 192, 325, 339, 588 |
| LweI | GCATC | 1 cut(s) | 253 |
| MaeII | ACGT | 2 cut(s) | 137, 705 |
| MaeIII | GTNAC | 4 cut(s) | 166, 331, 385, 480 |
| MalI | GATC | 1 cut(s) | 737 |
| MboI | GATC | 1 cut(s) | 735 |
| MboII | GAAGA | 6 cut(s) | 71, 112, 115, 280, 655, 686 |
| MfeI | CAATTG | 1 cut(s) | 680 |
| MlsI | TGGCCA | 1 cut(s) | 10 |
| MluCI | AATT | 6 cut(s) | 225, 232, 257, 379, 667, 680 |
| MluNI | TGGCCA | 1 cut(s) | 10 |
| MlyI | GAGTC | 1 cut(s) | 722 |
| MmeI | TCCRAC | 1 cut(s) | 352 |
| MnlI | CCTC | 4 cut(s) | 87, 292, 368, 598 |
| Mox20I | TGGCCA | 1 cut(s) | 10 |
| MroXI | GAANNNNTTC | 1 cut(s) | 290 |
| MscI | TGGCCA | 1 cut(s) | 10 |
| MseI | TTAA | 1 cut(s) | 624 |
| Msp20I | TGGCCA | 1 cut(s) | 10 |
| MspR9I | CCNGG | 1 cut(s) | 81 |
| MunI | CAATTG | 1 cut(s) | 680 |
| MvaI | CCWGG | 1 cut(s) | 81 |
| NdeII | GATC | 1 cut(s) | 735 |
| NlaIII | CATG | 8 cut(s) | 50, 70, 100, 199, 393, 602, 704, 751 |
| NmuCI | GTSAC | 1 cut(s) | 385 |
| NspI | RCATGY | 2 cut(s) | 602, 751 |
| PagI | TCATGA | 2 cut(s) | 96, 700 |
| PciSI | GCTCTTC | 1 cut(s) | 669 |
| PdmI | GAANNNNTTC | 1 cut(s) | 290 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 451 |
| PleI | GAGTC | 1 cut(s) | 722 |
| PpsI | GAGTC | 1 cut(s) | 722 |
| Psp6I | CCWGG | 1 cut(s) | 79 |
| PspGI | CCWGG | 1 cut(s) | 79 |
| RsaI | GTAC | 1 cut(s) | 443 |
| RsaNI | GTAC | 1 cut(s) | 442 |
| SapI | GCTCTTC | 1 cut(s) | 669 |
| SaqAI | TTAA | 1 cut(s) | 624 |
| Sau3AI | GATC | 1 cut(s) | 735 |
| SchI | GAGTC | 1 cut(s) | 722 |
| ScrFI | CCNGG | 1 cut(s) | 81 |
| SetI | ASST | 7 cut(s) | 140, 303, 328, 451, 492, 609, 708 |
| SfaNI | GCATC | 1 cut(s) | 253 |
| SmlI | CTYRAG | 2 cut(s) | 90, 296 |
| SmoI | CTYRAG | 2 cut(s) | 90, 296 |
| Sse9I | AATT | 6 cut(s) | 225, 232, 257, 379, 667, 680 |
| SsiI | CCGC | 2 cut(s) | 151, 251 |
| StyD4I | CCNGG | 1 cut(s) | 79 |
| StyI | CCWWGG | 1 cut(s) | 445 |
| TaaI | ACNGT | 1 cut(s) | 21 |
| TaiI | ACGT | 2 cut(s) | 140, 708 |
| TasI | AATT | 6 cut(s) | 225, 232, 257, 379, 667, 680 |
| Tru1I | TTAA | 1 cut(s) | 624 |
| Tru9I | TTAA | 1 cut(s) | 624 |
| TscAI | CASTG | 3 cut(s) | 211, 582, 738 |
| TseFI | GTSAC | 1 cut(s) | 385 |
| Tsp45I | GTSAC | 1 cut(s) | 385 |
| TspDTI | ATGAA | 4 cut(s) | 35, 113, 281, 542 |
| TspRI | CASTG | 3 cut(s) | 211, 582, 738 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 451 |
| XapI | RAATTY | 4 cut(s) | 232, 257, 379, 667 |
| XceI | RCATGY | 2 cut(s) | 602, 751 |
| XmiI | GTMKAC | 1 cut(s) | 567 |
| XmnI | GAANNNNTTC | 1 cut(s) | 290 |