gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 241 |
| AgsI | TTSAA | 2 cut(s) | 46, 188 |
| AluBI | AGCT | 3 cut(s) | 101, 209, 261 |
| AluI | AGCT | 3 cut(s) | 101, 209, 261 |
| ApeKI | GCWGC | 1 cut(s) | 101 |
| AspS9I | GGNCC | 1 cut(s) | 219 |
| AsuHPI | GGTGA | 1 cut(s) | 238 |
| AsuII | TTCGAA | 1 cut(s) | 119 |
| AvaII | GGWCC | 1 cut(s) | 219 |
| BbvI | GCAGC | 1 cut(s) | 88 |
| BfmI | CTRYAG | 1 cut(s) | 234 |
| BfuAI | ACCTGC | 1 cut(s) | 241 |
| BisI | GCNGC | 1 cut(s) | 102 |
| BlsI | GCNGC | 1 cut(s) | 103 |
| Bme18I | GGWCC | 1 cut(s) | 219 |
| BmgT120I | GGNCC | 1 cut(s) | 219 |
| BmrI | ACTGGG | 1 cut(s) | 119 |
| BmuI | ACTGGG | 1 cut(s) | 119 |
| Bpu14I | TTCGAA | 1 cut(s) | 119 |
| BsaAI | YACGTR | 1 cut(s) | 176 |
| Bse1I | ACTGG | 2 cut(s) | 74, 125 |
| Bse3DI | GCAATG | 1 cut(s) | 111 |
| BseMI | GCAATG | 1 cut(s) | 111 |
| BseNI | ACTGG | 2 cut(s) | 74, 125 |
| BseXI | GCAGC | 1 cut(s) | 88 |
| Bsp119I | TTCGAA | 1 cut(s) | 119 |
| BspHI | TCATGA | 1 cut(s) | 133 |
| BspMAI | CTGCAG | 1 cut(s) | 238 |
| BspMI | ACCTGC | 1 cut(s) | 241 |
| BspT104I | TTCGAA | 1 cut(s) | 119 |
| BsrDI | GCAATG | 1 cut(s) | 111 |
| BsrI | ACTGG | 2 cut(s) | 74, 125 |
| Bst4CI | ACNGT | 1 cut(s) | 164 |
| BstBAI | YACGTR | 1 cut(s) | 176 |
| BstBI | TTCGAA | 1 cut(s) | 119 |
| BstDEI | CTNAG | 2 cut(s) | 32, 257 |
| BstSFI | CTRYAG | 1 cut(s) | 234 |
| BstV1I | GCAGC | 1 cut(s) | 88 |
| BtsIMutI | CAGTG | 1 cut(s) | 132 |
| BveI | ACCTGC | 1 cut(s) | 241 |
| CciI | TCATGA | 1 cut(s) | 133 |
| Cfr13I | GGNCC | 1 cut(s) | 219 |
| CviAII | CATG | 3 cut(s) | 65, 106, 134 |
| CviJI | RGCY | 5 cut(s) | 5, 31, 101, 209, 261 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 31, 101, 209, 261 |
| DdeI | CTNAG | 2 cut(s) | 32, 257 |
| Eco47I | GGWCC | 1 cut(s) | 219 |
| FaeI | CATG | 3 cut(s) | 68, 109, 137 |
| FaiI | YATR | 8 cut(s) | 26, 28, 66, 107, 135, 150, 152, 215 |
| FatI | CATG | 3 cut(s) | 64, 105, 133 |
| Fnu4HI | GCNGC | 1 cut(s) | 102 |
| Fsp4HI | GCNGC | 1 cut(s) | 102 |
| GluI | GCNGC | 1 cut(s) | 102 |
| Hin1II | CATG | 3 cut(s) | 68, 109, 137 |
| HinfI | GANTC | 1 cut(s) | 184 |
| HphI | GGTGA | 1 cut(s) | 238 |
| Hpy166II | GTNNAC | 1 cut(s) | 246 |
| Hpy188III | TCNNGA | 1 cut(s) | 134 |
| Hpy8I | GTNNAC | 1 cut(s) | 246 |
| HpyAV | CCTTC | 1 cut(s) | 40 |
| HpyCH4III | ACNGT | 1 cut(s) | 164 |
| HpyCH4IV | ACGT | 1 cut(s) | 175 |
| HpyCH4V | TGCA | 5 cut(s) | 55, 68, 109, 202, 236 |
| HpyF3I | CTNAG | 2 cut(s) | 32, 257 |
| HpySE526I | ACGT | 1 cut(s) | 175 |
| Hsp92II | CATG | 3 cut(s) | 68, 109, 137 |
| LpnPI | CCDG | 3 cut(s) | 87, 138, 246 |
| Lsp1109I | GCAGC | 1 cut(s) | 88 |
| MaeII | ACGT | 1 cut(s) | 175 |
| MaeIII | GTNAC | 2 cut(s) | 76, 164 |
| MboII | GAAGA | 1 cut(s) | 193 |
| MluCI | AATT | 2 cut(s) | 269, 282 |
| MnlI | CCTC | 2 cut(s) | 232, 268 |
| MseI | TTAA | 2 cut(s) | 170, 281 |
| NlaIII | CATG | 3 cut(s) | 68, 109, 137 |
| NmeAIII | GCCGAG | 1 cut(s) | 242 |
| NmuCI | GTSAC | 2 cut(s) | 76, 164 |
| NspV | TTCGAA | 1 cut(s) | 119 |
| PagI | TCATGA | 1 cut(s) | 133 |
| PfeI | GAWTC | 1 cut(s) | 184 |
| PkrI | GCNGC | 1 cut(s) | 103 |
| Ppu21I | YACGTR | 1 cut(s) | 176 |
| PspPI | GGNCC | 1 cut(s) | 219 |
| PstI | CTGCAG | 1 cut(s) | 238 |
| SaqAI | TTAA | 2 cut(s) | 170, 281 |
| SatI | GCNGC | 1 cut(s) | 102 |
| Sau96I | GGNCC | 1 cut(s) | 219 |
| SetI | ASST | 7 cut(s) | 103, 178, 211, 224, 235, 263, 279 |
| SfcI | CTRYAG | 1 cut(s) | 234 |
| SfuI | TTCGAA | 1 cut(s) | 119 |
| SinI | GGWCC | 1 cut(s) | 219 |
| Sse9I | AATT | 2 cut(s) | 269, 282 |
| TaaI | ACNGT | 1 cut(s) | 164 |
| TaiI | ACGT | 1 cut(s) | 178 |
| TaqI | TCGA | 2 cut(s) | 119, 303 |
| TasI | AATT | 2 cut(s) | 269, 282 |
| TfiI | GAWTC | 1 cut(s) | 184 |
| Tru1I | TTAA | 2 cut(s) | 170, 281 |
| Tru9I | TTAA | 2 cut(s) | 170, 281 |
| TscAI | CASTG | 1 cut(s) | 132 |
| TseFI | GTSAC | 2 cut(s) | 76, 164 |
| TseI | GCWGC | 1 cut(s) | 101 |
| Tsp45I | GTSAC | 2 cut(s) | 76, 164 |
| TspDTI | ATGAA | 2 cut(s) | 122, 150 |
| TspGWI | ACGGA | 1 cut(s) | 232 |
| TspRI | CASTG | 1 cut(s) | 132 |
| VpaK11BI | GGWCC | 1 cut(s) | 219 |