beta-galactosidase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SH3_retrovirus | PF25597 | 241 - 298 | 7e-21 | Retroviral polymerase SH3-like domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1352 |
| Acc36I | ACCTGC | 1 cut(s) | 1352 |
| AccI | GTMKAC | 3 cut(s) | 362, 741, 1343 |
| AciI | CCGC | 1 cut(s) | 754 |
| AclWI | GGATC | 1 cut(s) | 1519 |
| AcsI | RAATTY | 2 cut(s) | 195, 344 |
| AcuI | CTGAAG | 2 cut(s) | 908, 1536 |
| AdeI | CACNNNGTG | 1 cut(s) | 1238 |
| AfaI | GTAC | 1 cut(s) | 352 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 926, 1298, 1508 |
| AflIII | ACRYGT | 3 cut(s) | 673, 1066, 1441 |
| AgsI | TTSAA | 5 cut(s) | 200, 264, 341, 1282, 1330 |
| AjnI | CCWGG | 2 cut(s) | 83, 1291 |
| AluBI | AGCT | 2 cut(s) | 1244, 1394 |
| AluI | AGCT | 2 cut(s) | 1244, 1394 |
| Alw21I | GWGCWC | 2 cut(s) | 241, 778 |
| Alw26I | GTCTC | 2 cut(s) | 134, 1179 |
| Alw44I | GTGCAC | 1 cut(s) | 237 |
| AlwI | GGATC | 1 cut(s) | 1519 |
| AoxI | GGCC | 1 cut(s) | 1300 |
| ApaLI | GTGCAC | 1 cut(s) | 237 |
| ApeKI | GCWGC | 4 cut(s) | 7, 91, 599, 1394 |
| ApoI | RAATTY | 2 cut(s) | 195, 344 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 372, 404 |
| AseI | ATTAAT | 1 cut(s) | 1163 |
| AspLEI | GCGC | 1 cut(s) | 160 |
| AsuHPI | GGTGA | 3 cut(s) | 207, 455, 1224 |
| AsuII | TTCGAA | 1 cut(s) | 954 |
| BaeGI | GKGCMC | 1 cut(s) | 241 |
| BanII | GRGCYC | 1 cut(s) | 136 |
| BbsI | GAAGAC | 1 cut(s) | 382 |
| Bbv12I | GWGCWC | 2 cut(s) | 241, 778 |
| BbvI | GCAGC | 4 cut(s) | 19, 103, 586, 1381 |
| BccI | CCATC | 5 cut(s) | 34, 220, 929, 955, 1279 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1412, 1446 |
| BciT130I | CCWGG | 2 cut(s) | 85, 1293 |
| BclI | TGATCA | 3 cut(s) | 448, 612, 1023 |
| BcoDI | GTCTC | 2 cut(s) | 134, 1179 |
| BfaI | CTAG | 1 cut(s) | 1236 |
| BfmI | CTRYAG | 1 cut(s) | 1034 |
| BfuAI | ACCTGC | 1 cut(s) | 1352 |
| BisI | GCNGC | 4 cut(s) | 8, 92, 600, 1395 |
| BlsI | GCNGC | 4 cut(s) | 9, 93, 601, 1396 |
| Bme1390I | CCNGG | 2 cut(s) | 85, 1293 |
| BmiI | GGNNCC | 1 cut(s) | 1290 |
| BmrFI | CCNGG | 2 cut(s) | 85, 1293 |
| BmsI | GCATC | 5 cut(s) | 9, 757, 1243, 1339, 1471 |
| BpiI | GAAGAC | 1 cut(s) | 382 |
| Bpu14I | TTCGAA | 1 cut(s) | 954 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1022, 1043 |
| BsaJI | CCNNGG | 1 cut(s) | 861 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 402, 432, 460, 490 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 926, 1298, 1508 |
| Bse1I | ACTGG | 1 cut(s) | 1418 |
| Bse3DI | GCAATG | 1 cut(s) | 1191 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1022, 1043 |
| BseBI | CCWGG | 2 cut(s) | 85, 1293 |
| BseDI | CCNNGG | 1 cut(s) | 861 |
| BseGI | GGATG | 5 cut(s) | 832, 871, 975, 1258, 1486 |
| BseJI | GATNNNNATC | 2 cut(s) | 1022, 1043 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 926, 1298, 1508 |
| BseMI | GCAATG | 1 cut(s) | 1191 |
| BseMII | CTCAG | 1 cut(s) | 977 |
| BseNI | ACTGG | 1 cut(s) | 1418 |
| BseRI | GAGGAG | 1 cut(s) | 423 |
| BseSI | GKGCMC | 1 cut(s) | 241 |
| BseXI | GCAGC | 4 cut(s) | 19, 103, 586, 1381 |
| BsgI | GTGCAG | 1 cut(s) | 967 |
| BshFI | GGCC | 1 cut(s) | 1302 |
| BsiHKAI | GWGCWC | 2 cut(s) | 241, 778 |
| BslFI | GGGAC | 1 cut(s) | 188 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 926, 1298, 1508 |
| BsmAI | GTCTC | 2 cut(s) | 134, 1179 |
| BsmFI | GGGAC | 1 cut(s) | 188 |
| BsnI | GGCC | 1 cut(s) | 1302 |
| Bsp119I | TTCGAA | 1 cut(s) | 954 |
| Bsp1286I | GDGCHC | 3 cut(s) | 136, 241, 778 |
| Bsp1407I | TGTACA | 1 cut(s) | 350 |
| Bsp143I | GATC | 9 cut(s) | 448, 612, 1023, 1044, 1114, 1429, 1453, 1511, 1519 |
| Bsp19I | CCATGG | 1 cut(s) | 861 |
| BspACI | CCGC | 1 cut(s) | 754 |
| BspANI | GGCC | 1 cut(s) | 1302 |
| BspCNI | CTCAG | 1 cut(s) | 978 |
| BspLI | GGNNCC | 1 cut(s) | 1290 |
| BspMI | ACCTGC | 1 cut(s) | 1352 |
| BspPI | GGATC | 1 cut(s) | 1519 |
| BspT104I | TTCGAA | 1 cut(s) | 954 |
| BsrDI | GCAATG | 1 cut(s) | 1191 |
| BsrGI | TGTACA | 1 cut(s) | 350 |
| BsrI | ACTGG | 1 cut(s) | 1418 |
| BssECI | CCNNGG | 1 cut(s) | 861 |
| BssMI | GATC | 9 cut(s) | 448, 612, 1023, 1044, 1114, 1429, 1453, 1511, 1519 |
| BssNAI | GTATAC | 1 cut(s) | 1344 |
| BssT1I | CCWWGG | 1 cut(s) | 861 |
| Bst1107I | GTATAC | 1 cut(s) | 1344 |
| Bst2UI | CCWGG | 2 cut(s) | 85, 1293 |
| Bst4CI | ACNGT | 3 cut(s) | 252, 654, 1140 |
| Bst6I | CTCTTC | 1 cut(s) | 951 |
| BstAUI | TGTACA | 1 cut(s) | 350 |
| BstBI | TTCGAA | 1 cut(s) | 954 |
| BstC8I | GCNNGC | 1 cut(s) | 541 |
| BstDEI | CTNAG | 3 cut(s) | 288, 986, 1542 |
| BstDSI | CCRYGG | 1 cut(s) | 861 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1296 |
| BstF5I | GGATG | 5 cut(s) | 832, 871, 975, 1258, 1486 |
| BstHHI | GCGC | 1 cut(s) | 160 |
| BstKTI | GATC | 9 cut(s) | 451, 615, 1026, 1047, 1117, 1432, 1456, 1514, 1522 |
| BstMAI | GTCTC | 2 cut(s) | 134, 1179 |
| BstMBI | GATC | 9 cut(s) | 448, 612, 1023, 1044, 1114, 1429, 1453, 1511, 1519 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 13, 596, 1358 |
| BstNI | CCWGG | 2 cut(s) | 85, 1293 |
| BstNSI | RCATGY | 7 cut(s) | 438, 677, 740, 774, 1070, 1445, 1594 |
| BstSCI | CCNGG | 2 cut(s) | 83, 1291 |
| BstSFI | CTRYAG | 1 cut(s) | 1034 |
| BstSLI | GKGCMC | 1 cut(s) | 241 |
| BstV1I | GCAGC | 4 cut(s) | 19, 103, 586, 1381 |
| BstV2I | GAAGAC | 1 cut(s) | 382 |
| BstX2I | RGATCY | 1 cut(s) | 1511 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 497 |
| BstYI | RGATCY | 1 cut(s) | 1511 |
| BstZ17I | GTATAC | 1 cut(s) | 1344 |
| BsuRI | GGCC | 1 cut(s) | 1302 |
| BtgI | CCRYGG | 1 cut(s) | 861 |
| BtsCI | GGATG | 5 cut(s) | 832, 871, 975, 1258, 1486 |
| BtsIMutI | CAGTG | 1 cut(s) | 1425 |
| BveI | ACCTGC | 1 cut(s) | 1352 |
| Cac8I | GCNNGC | 1 cut(s) | 541 |
| CfoI | GCGC | 1 cut(s) | 160 |
| Csp6I | GTAC | 1 cut(s) | 351 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1191, 1226, 1425, 1460 |
| CviQI | GTAC | 1 cut(s) | 351 |
| DdeI | CTNAG | 3 cut(s) | 288, 986, 1542 |
| DpnI | GATC | 9 cut(s) | 450, 614, 1025, 1046, 1116, 1431, 1455, 1513, 1521 |
| DpnII | GATC | 9 cut(s) | 448, 612, 1023, 1044, 1114, 1429, 1453, 1511, 1519 |
| DraIII | CACNNNGTG | 1 cut(s) | 1238 |
| Eam1104I | CTCTTC | 1 cut(s) | 951 |
| EarI | CTCTTC | 1 cut(s) | 951 |
| Eco130I | CCWWGG | 1 cut(s) | 861 |
| Eco147I | AGGCCT | 1 cut(s) | 1302 |
| Eco24I | GRGCYC | 1 cut(s) | 136 |
| Eco57I | CTGAAG | 2 cut(s) | 908, 1536 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1296 |
| EcoRII | CCWGG | 2 cut(s) | 83, 1291 |
| EcoT14I | CCWWGG | 1 cut(s) | 861 |
| EcoT22I | ATGCAT | 2 cut(s) | 24, 772 |
| EcoT38I | GRGCYC | 1 cut(s) | 136 |
| ErhI | CCWWGG | 1 cut(s) | 861 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1509, 1541 |
| FaqI | GGGAC | 1 cut(s) | 188 |
| FauNDI | CATATG | 2 cut(s) | 277, 1248 |
| FbaI | TGATCA | 3 cut(s) | 448, 612, 1023 |
| FblI | GTMKAC | 3 cut(s) | 362, 741, 1343 |
| Fnu4HI | GCNGC | 4 cut(s) | 8, 92, 600, 1395 |
| FokI | GGATG | 5 cut(s) | 819, 878, 982, 1265, 1493 |
| FriOI | GRGCYC | 1 cut(s) | 136 |
| Fsp4HI | GCNGC | 4 cut(s) | 8, 92, 600, 1395 |
| FspBI | CTAG | 1 cut(s) | 1236 |
| GlaI | GCGC | 1 cut(s) | 159 |
| GluI | GCNGC | 4 cut(s) | 8, 92, 600, 1395 |
| HaeIII | GGCC | 1 cut(s) | 1302 |
| HhaI | GCGC | 1 cut(s) | 160 |
| Hin6I | GCGC | 1 cut(s) | 158 |
| HinP1I | GCGC | 1 cut(s) | 158 |
| HinfI | GANTC | 7 cut(s) | 292, 421, 517, 841, 914, 951, 1090 |
| HphI | GGTGA | 3 cut(s) | 207, 455, 1224 |
| Hpy166II | GTNNAC | 7 cut(s) | 239, 271, 363, 483, 742, 761, 1344 |
| Hpy188III | TCNNGA | 5 cut(s) | 175, 341, 446, 638, 1112 |
| Hpy8I | GTNNAC | 7 cut(s) | 239, 271, 363, 483, 742, 761, 1344 |
| HpyAV | CCTTC | 2 cut(s) | 46, 1331 |
| HpyCH4III | ACNGT | 3 cut(s) | 252, 654, 1140 |
| HpyCH4IV | ACGT | 1 cut(s) | 235 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 13, 596, 1358 |
| HpyF3I | CTNAG | 3 cut(s) | 288, 986, 1542 |
| HpySE526I | ACGT | 1 cut(s) | 235 |
| HspAI | GCGC | 1 cut(s) | 158 |
| Ksp22I | TGATCA | 3 cut(s) | 448, 612, 1023 |
| Kzo9I | GATC | 9 cut(s) | 448, 612, 1023, 1044, 1114, 1429, 1453, 1511, 1519 |
| LmnI | GCTCC | 3 cut(s) | 4, 548, 1294 |
| Lsp1109I | GCAGC | 4 cut(s) | 19, 103, 586, 1381 |
| LweI | GCATC | 5 cut(s) | 9, 757, 1243, 1339, 1471 |
| MaeI | CTAG | 1 cut(s) | 1236 |
| MaeII | ACGT | 1 cut(s) | 235 |
| MaeIII | GTNAC | 5 cut(s) | 330, 868, 977, 1258, 1595 |
| MalI | GATC | 9 cut(s) | 450, 614, 1025, 1046, 1116, 1431, 1455, 1513, 1521 |
| MboI | GATC | 9 cut(s) | 448, 612, 1023, 1044, 1114, 1429, 1453, 1511, 1519 |
| MboII | GAAGA | 8 cut(s) | 89, 329, 382, 526, 968, 1088, 1294, 1529 |
| MflI | RGATCY | 1 cut(s) | 1511 |
| MhlI | GDGCHC | 3 cut(s) | 136, 241, 778 |
| MluCI | AATT | 8 cut(s) | 178, 195, 344, 368, 1164, 1203, 1475, 1488 |
| MlyI | GAGTC | 3 cut(s) | 301, 835, 908 |
| MmeI | TCCRAC | 1 cut(s) | 1593 |
| MnlI | CCTC | 7 cut(s) | 401, 526, 714, 846, 1140, 1266, 1292 |
| Mph1103I | ATGCAT | 2 cut(s) | 24, 772 |
| MseI | TTAA | 5 cut(s) | 32, 384, 570, 1163, 1467 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1251, 1329 |
| MspA1I | CMGCKG | 1 cut(s) | 754 |
| MspR9I | CCNGG | 2 cut(s) | 85, 1293 |
| MvaI | CCWGG | 2 cut(s) | 85, 1293 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 13, 596, 1358 |
| NcoI | CCATGG | 1 cut(s) | 861 |
| NdeI | CATATG | 2 cut(s) | 277, 1248 |
| NdeII | GATC | 9 cut(s) | 448, 612, 1023, 1044, 1114, 1429, 1453, 1511, 1519 |
| NlaIV | GGNNCC | 1 cut(s) | 1290 |
| NmuCI | GTSAC | 2 cut(s) | 868, 1595 |
| NsiI | ATGCAT | 2 cut(s) | 24, 772 |
| NspI | RCATGY | 7 cut(s) | 438, 677, 740, 774, 1070, 1445, 1594 |
| NspV | TTCGAA | 1 cut(s) | 954 |
| PaqCI | CACCTGC | 1 cut(s) | 1352 |
| PceI | AGGCCT | 1 cut(s) | 1302 |
| PciI | ACATGT | 3 cut(s) | 673, 1066, 1441 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 476, 517 |
| PfeI | GAWTC | 4 cut(s) | 421, 517, 951, 1090 |
| PkrI | GCNGC | 4 cut(s) | 9, 93, 601, 1396 |
| PleI | GAGTC | 3 cut(s) | 300, 835, 908 |
| PpsI | GAGTC | 3 cut(s) | 300, 835, 908 |
| PscI | ACATGT | 3 cut(s) | 673, 1066, 1441 |
| PshBI | ATTAAT | 1 cut(s) | 1163 |
| Psp6I | CCWGG | 2 cut(s) | 83, 1291 |
| PspGI | CCWGG | 2 cut(s) | 83, 1291 |
| PspN4I | GGNNCC | 1 cut(s) | 1290 |
| PsuI | RGATCY | 1 cut(s) | 1511 |
| RsaI | GTAC | 1 cut(s) | 352 |
| RsaNI | GTAC | 1 cut(s) | 351 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1251, 1329 |
| SaqAI | TTAA | 5 cut(s) | 32, 384, 570, 1163, 1467 |
| SatI | GCNGC | 4 cut(s) | 8, 92, 600, 1395 |
| Sau3AI | GATC | 9 cut(s) | 448, 612, 1023, 1044, 1114, 1429, 1453, 1511, 1519 |
| SchI | GAGTC | 3 cut(s) | 301, 835, 908 |
| ScrFI | CCNGG | 2 cut(s) | 85, 1293 |
| SduI | GDGCHC | 3 cut(s) | 136, 241, 778 |
| SetI | ASST | 8 cut(s) | 156, 238, 537, 1005, 1237, 1246, 1366, 1396 |
| SfaNI | GCATC | 5 cut(s) | 9, 757, 1243, 1339, 1471 |
| SfcI | CTRYAG | 1 cut(s) | 1034 |
| SfuI | TTCGAA | 1 cut(s) | 954 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1251, 1329 |
| Sse9I | AATT | 8 cut(s) | 178, 195, 344, 368, 1164, 1203, 1475, 1488 |
| SseBI | AGGCCT | 1 cut(s) | 1302 |
| SsiI | CCGC | 1 cut(s) | 754 |
| SspMI | CTAG | 1 cut(s) | 1236 |
| StuI | AGGCCT | 1 cut(s) | 1302 |
| StyD4I | CCNGG | 2 cut(s) | 83, 1291 |
| StyI | CCWWGG | 1 cut(s) | 861 |
| TaaI | ACNGT | 3 cut(s) | 252, 654, 1140 |
| TaiI | ACGT | 1 cut(s) | 238 |
| TaqI | TCGA | 5 cut(s) | 555, 954, 1335, 1432, 1456 |
| TasI | AATT | 8 cut(s) | 178, 195, 344, 368, 1164, 1203, 1475, 1488 |
| TatI | WGTACW | 1 cut(s) | 350 |
| TfiI | GAWTC | 4 cut(s) | 421, 517, 951, 1090 |
| Tru1I | TTAA | 5 cut(s) | 32, 384, 570, 1163, 1467 |
| Tru9I | TTAA | 5 cut(s) | 32, 384, 570, 1163, 1467 |
| TscAI | CASTG | 1 cut(s) | 1425 |
| TseFI | GTSAC | 2 cut(s) | 868, 1595 |
| TseI | GCWGC | 4 cut(s) | 7, 91, 599, 1394 |
| Tsp45I | GTSAC | 2 cut(s) | 868, 1595 |
| TspDTI | ATGAA | 5 cut(s) | 207, 382, 1367, 1385, 1453 |
| TspGWI | ACGGA | 5 cut(s) | 318, 420, 468, 526, 1491 |
| TspRI | CASTG | 1 cut(s) | 1425 |
| VneI | GTGCAC | 1 cut(s) | 237 |
| VspI | ATTAAT | 1 cut(s) | 1163 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1296 |
| XapI | RAATTY | 2 cut(s) | 195, 344 |
| XceI | RCATGY | 7 cut(s) | 438, 677, 740, 774, 1070, 1445, 1594 |
| XmiI | GTMKAC | 3 cut(s) | 362, 741, 1343 |
| XspI | CTAG | 1 cut(s) | 1236 |
| Zsp2I | ATGCAT | 2 cut(s) | 24, 772 |