RchiOBHm_Chr6g0263751

Reverse transcriptase (RNA-dependent DNA polymerase)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000071
Physical Location & Seq
Forward (+)
18618806 .. 18624193
5388 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ23655

Sequence Viewer

Length: 1359 bp
ATGTCAATCAAAGGGCAAAGAGGAACTCTATTGTGGCATGCTCACATATTTTGGCTGAGAGCCACTGTCTATGGAGCAATTGTCATCCTGCCCAGACACGGGACTGGCTTTCCTTTTCCTCAGCCTTACAGTGAAACTAATCTCGTTTTAGGGAACAGACTGGGATTGCCTCCGACAATGTCAGATGCACATACCATTAATGGAAAGCCAGGGCCGCTCTTTCCATGTTCTGAAAAAGAGATCCGTCTGGACTCTGTTCATTTGTTTCAAATGGCTTTGTCTCCTCAGAGTGGAAACCCTCAATATTGGCCCAATAATCAAAGGTACCAACCAAGTCAGAATTATAACAGGGGAATAGCTTCATTCAACAGTCAGGTGACTTGCAACTATTGTAAAACTGTTAGCCACTACAAGAGTCAATGCCCCAAGTTGCTAAGACTCAACTCCAATAACTCTGGTTGGAAAGCTAGTAACAATGGTAAAAAAGGCAAGGCCGCAATCCAACTGGTGCAGAAGCAAGAACCTGATTTCTATGATGTGGAGGGCCAAGATCAAACTAAGGTGAAGCACAATTCAGATGGTTCGGTGGACAGATATAAGGCGAGGCTAGTAGCGAAGGGTTATACCCAGAAGTATGGCGTGGACTATGATGAAACTTTTGCACCAGTAGCAAAGATCAATACAATCCGGGTACTTTTGTCTCTAGCGGCTAATCTTGATTGGCCTCTGCAACAGTTTGATGTTAAAAATGCCTTCTTGCATGCTGATTTGAACGAAGAAGTATACTTGGACTTGCCTCCGGGATATGGTACTTCCACTGGACTCAAGGTGAGAAAGTATGTCTTTGACTTATTAGCAGAGACAGGTATGCTCGATTGCCAATCAACTGACACACCCATTGAGCAGAACCATCGATTAGCTGAGTATCCAGATCAAGTACCCACGAATAAGGCAAGATATCAGAGATTAGTTGGAAGATTAATTTATTTGTCACACACTAGACCAGACTTAGCTTATGCAGTTAGTGTTGTGAGTCAGTTCATGCATAATCCTAGTGAGGCTCATATGGCAGCTGTAGTTTGGATCTTGAGGTACTTGAAGTCTACTTCTGGAAGAGGGTTGGTGTTTTCTAAGCATAGGCATTTGGATGTTTTGGGGTGGCCCGTTCTAGTGCTGAAGCTGAATATAGAGGAATGGCTCGTGAAGTTTGTTGATGCAGTCTATACCAAACCATTTACATCTCAGGCACTACTAATTGCACCAGGCCAGACAACAAATATTCTTGTTCAGGCAAACCAAGTCCCTAGCAGATACTTCATGGCTGCAAGGTCATTCATGGATGCACCTCTCTTTCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2 Retrotran_gag_2 Retrotran_gag_3 Retrotrans_gag gag_pre-integrs rve

Protein Analysis

452

Amino Acids

51.03

Weight (kDa)

9.34

Isoelectric Point (pI)

38.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_2 PF07727 189 - 271 5.3e-25 Reverse transcriptase (RNA-dependent DNA polymerase)
Cu-oxidase PF00394 404 - 443 4.6e-08 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000071)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G23160 AT4G23160
fragaria_vesca FvH4_2g08111 FvH4_2g17332 FvH4_2g18071 FvH4_2g20531 FvH4_2g20842 FvH4_2g20842 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g24231 FvH4_2g24232 FvH4_3g00831 FvH4_3g00831 FvH4_3g03561 FvH4_3g03561 FvH4_3g10282 FvH4_3g18165 FvH4_3g19021 FvH4_3g24071 FvH4_3g33123 FvH4_3g33970 FvH4_3g38851 FvH4_3g39133 FvH4_3g39271 FvH4_4g00981 FvH4_4g08191 FvH4_4g08311 FvH4_4g08311 FvH4_4g08311 FvH4_4g09341 FvH4_4g12550 FvH4_4g12550 FvH4_4g12550 FvH4_4g13391 FvH4_4g14842 FvH4_4g27901 FvH4_5g11561 FvH4_5g15611 FvH4_5g17991 FvH4_5g27871 FvH4_5g29995 FvH4_5g39662 FvH4_6g02392 FvH4_6g12781 FvH4_6g20106 FvH4_6g20106 FvH4_6g20106 FvH4_6g30872 FvH4_6g34901 FvH4_6g35632 FvH4_6g36661 FvH4_6g43795 FvH4_6g44611 FvH4_7g01791 FvH4_7g04041 FvH4_7g12551 FvH4_7g23351
malus_domestica MD00G1134200.v1.1 MD01G1096500.v1.1 MD01G1128200.v1.1 MD02G1250500.v1.1 MD02G1294900.v1.1 MD03G1121800.v1.1 MD04G1021400.v1.1 MD04G1051100.v1.1 MD04G1051300.v1.1 MD04G1099000.v1.1 MD05G1047900.v1.1 MD05G1298000.v1.1 MD06G1064200.v1.1 MD06G1120600.v1.1 MD07G1013900.v1.1 MD09G1226900.v1.1 MD10G1196700.v1.1 MD10G1307000.v1.1 MD10G1338900.v1.1 MD11G1107300.v1.1 MD11G1138300.v1.1 MD11G1236700.v1.1 MD12G1032500.v1.1 MD12G1150100.v1.1 MD12G1247800.v1.1 MD17G1267900.v1.1
pyrus_communis pycom02g03660 pycom02g13370 pycom02g14840 pycom02g18400 pycom02g18880 pycom02g22740 pycom04g08800 pycom04g15770 pycom05g07980 pycom05g19640 pycom06g09360 pycom07g13160 pycom08g11820 pycom08g21740 pycom09g19980 pycom10g04810 pycom10g05420 pycom10g14650 pycom11g03140 pycom11g21550 pycom12g14740 pycom13g01600 pycom13g29510 pycom14g07060 pycom15g01990 pycom15g19850 pycom15g30860 pycom16g15290 pycom16g16250 pycom16g25390 pycom17g17270 pycom520g00070
rosa_chinensis RchiOBHm_Chr1g0316691 RchiOBHm_Chr1g0320751 RchiOBHm_Chr1g0320771 RchiOBHm_Chr1g0322231 RchiOBHm_Chr1g0322861 RchiOBHm_Chr1g0328471 RchiOBHm_Chr1g0333321 RchiOBHm_Chr1g0337871 RchiOBHm_Chr1g0339051 RchiOBHm_Chr1g0349861 RchiOBHm_Chr1g0361951 RchiOBHm_Chr1g0365931 RchiOBHm_Chr1g0365981 RchiOBHm_Chr1g0377711 RchiOBHm_Chr1g0381581 RchiOBHm_Chr1g0382741 RchiOBHm_Chr1g0383501 RchiOBHm_Chr2g0101201 RchiOBHm_Chr2g0113601 RchiOBHm_Chr2g0124031 RchiOBHm_Chr2g0135481 RchiOBHm_Chr2g0148361 RchiOBHm_Chr2g0150101 RchiOBHm_Chr2g0154181 RchiOBHm_Chr2g0156071 RchiOBHm_Chr2g0166521 RchiOBHm_Chr2g0166821 RchiOBHm_Chr3g0448011 RchiOBHm_Chr3g0450941 RchiOBHm_Chr3g0450961 RchiOBHm_Chr3g0451051 RchiOBHm_Chr3g0451721 RchiOBHm_Chr3g0453371 RchiOBHm_Chr3g0454881 RchiOBHm_Chr3g0457421 RchiOBHm_Chr3g0457661 RchiOBHm_Chr3g0460011 RchiOBHm_Chr3g0461531 RchiOBHm_Chr3g0461981 RchiOBHm_Chr3g0463471 RchiOBHm_Chr3g0466641 RchiOBHm_Chr3g0468181 RchiOBHm_Chr3g0483351 RchiOBHm_Chr4g0394001 RchiOBHm_Chr4g0397261 RchiOBHm_Chr4g0404531 RchiOBHm_Chr4g0410841 RchiOBHm_Chr4g0415501 RchiOBHm_Chr4g0425221 RchiOBHm_Chr4g0430811 RchiOBHm_Chr5g0010831 RchiOBHm_Chr5g0016831 RchiOBHm_Chr5g0016851 RchiOBHm_Chr5g0031351 RchiOBHm_Chr5g0032151 RchiOBHm_Chr5g0041201 RchiOBHm_Chr5g0042191 RchiOBHm_Chr5g0064121 RchiOBHm_Chr5g0066601 RchiOBHm_Chr5g0078371 RchiOBHm_Chr5g0079271 RchiOBHm_Chr6g0263751 RchiOBHm_Chr6g0285111 RchiOBHm_Chr6g0298961 RchiOBHm_Chr6g0300481 RchiOBHm_Chr6g0303211 RchiOBHm_Chr7g0192341 RchiOBHm_Chr7g0196171 RchiOBHm_Chr7g0200281 RchiOBHm_Chr7g0200551 RchiOBHm_Chr7g0207611 RchiOBHm_Chr7g0212421 RchiOBHm_Chr7g0214991 RchiOBHm_Chr7g0219211 RchiOBHm_Chr7g0242371
rosa_laevigata RLG00000002389 RLG00000007980
rosa_roxburghii Rroxscaffold_1G00053480 Rroxscaffold_2G00090890 Rroxscaffold_2G00099660 Rroxscaffold_2G00134510 Rroxscaffold_3G00221450 Rroxscaffold_3G00240550 Rroxscaffold_4G00305710 Rroxscaffold_4G00306360 Rroxscaffold_4G00306800 Rroxscaffold_4G00329090 Rroxscaffold_5G00382750 Rroxscaffold_5G00385900 Rroxscaffold_6G00403080 Rroxscaffold_7G00172890 Rroxscaffold_7G00186690
rosa_samantha Rh1DG425600
rosa_wichuraiana Rw0G001640 Rw0G009160 Rw0G010480 Rw0G010520 Rw0G013850 Rw0G017170 Rw0G018520 Rw0G019280 Rw0G022780 Rw1G000360 Rw1G001410 Rw1G001630 Rw1G002100 Rw1G006810 Rw1G010680 Rw1G012700 Rw1G016160 Rw1G022180 Rw1G023580 Rw1G025640 Rw1G026310 Rw1G027230 Rw1G028110 Rw1G034180 Rw2G004990 Rw2G005840 Rw2G007350 Rw2G024730 Rw2G025580 Rw2G026670 Rw2G027210 Rw2G029060 Rw2G031560 Rw2G042190 Rw2G043850 Rw2G045990 Rw2G046130 Rw2G049290 Rw2G049310 Rw2G049790 Rw2G052250 Rw3G004350 Rw3G013100 Rw3G015280 Rw3G015720 Rw3G024630 Rw3G026470 Rw3G027840 Rw3G028960 Rw3G029130 Rw3G029160 Rw4G000280 Rw4G006650 Rw4G008970 Rw4G009310 Rw4G011730 Rw4G012000 Rw4G012610 Rw4G014300 Rw4G014690 Rw4G015190 Rw4G016470 Rw4G020750 Rw4G025060 Rw4G025080 Rw5G005610 Rw5G010380 Rw5G013970 Rw5G015130 Rw5G015250 Rw5G017640 Rw5G019910 Rw5G022410 Rw5G023550 Rw5G029710 Rw5G037650 Rw5G038280 Rw5G038570 Rw5G041550 Rw5G042600 Rw5G043910 Rw5G047850 Rw5G048200 Rw5G049920 Rw6G000260 Rw6G000530 Rw6G001710 Rw6G005090 Rw6G006730 Rw6G009310 Rw6G010950 Rw6G011630 Rw6G012080 Rw6G012750 Rw6G015970 Rw6G020700 Rw6G024350 Rw7G008540 Rw7G016620 Rw7G019400 Rw7G020010 Rw7G024240 Rw7G025630 Rw7G027550 Rw7G027770 Rw7G027960 Rw7G028450 Rw7G031280 Rw7G031970 Rw7G032180 Rw7G033590 Rw7G033720 Rw7G033890 Rw7G041800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 345
Acc65I GGTACC 1 cut(s) 324
AccB1I GGYRCC 1 cut(s) 324
AccBSI CCGCTC 1 cut(s) 217
AccI GTMKAC 2 cut(s) 783, 1103
AciI CCGC 3 cut(s) 215, 495, 707
AclWI GGATC 2 cut(s) 235, 1091
AcuI CTGAAG 1 cut(s) 1196
AfaI GTAC 5 cut(s) 326, 693, 811, 939, 1094
AfiI CCNNNNNNNGG 4 cut(s) 98, 99, 290, 806
AgsI TTSAA 4 cut(s) 269, 367, 772, 1099
AjnI CCWGG 2 cut(s) 208, 1261
AluBI AGCT 6 cut(s) 359, 467, 920, 1013, 1073, 1180
AluI AGCT 6 cut(s) 359, 467, 920, 1013, 1073, 1180
Alw26I GTCTC 3 cut(s) 285, 705, 854
AlwI GGATC 2 cut(s) 235, 1091
AoxI GGCC 7 cut(s) 212, 308, 492, 544, 722, 1160, 1264
ApeKI GCWGC 2 cut(s) 1070, 1322
AseI ATTAAT 2 cut(s) 198, 980
Asp700I GAANNNNTTC 1 cut(s) 358
Asp718I GGTACC 1 cut(s) 324
AspS9I GGNCC 4 cut(s) 212, 309, 544, 1161
AsuC2I CCSGG 2 cut(s) 689, 801
AsuHPI GGTGA 3 cut(s) 388, 574, 841
BaeI ACNNNNGTAYC 2 cut(s) 683, 716
BanI GGYRCC 1 cut(s) 324
BauI CACGAG 1 cut(s) 1199
BbvCI CCTCAGC 1 cut(s) 120
BbvI GCAGC 2 cut(s) 1082, 1309
BccI CCATC 2 cut(s) 572, 918
BcgI CGANNNNNNTGC 2 cut(s) 893, 927
BciT130I CCWGG 2 cut(s) 210, 1263
BciVI GTATCC 1 cut(s) 936
BcnI CCSGG 2 cut(s) 689, 801
BcoDI GTCTC 3 cut(s) 285, 705, 854
BfaI CTAG 7 cut(s) 468, 608, 704, 999, 1053, 1169, 1305
BfmI CTRYAG 1 cut(s) 1074
BfuI GTATCC 1 cut(s) 936
BisI GCNGC 5 cut(s) 215, 495, 708, 1071, 1323
BlsI GCNGC 5 cut(s) 216, 496, 709, 1072, 1324
Bme1390I CCNGG 4 cut(s) 210, 689, 801, 1263
BmgT120I GGNCC 4 cut(s) 212, 309, 544, 1161
BmiI GGNNCC 1 cut(s) 326
BmrFI CCNGG 4 cut(s) 210, 689, 801, 1263
BmrI ACTGGG 1 cut(s) 170
BmsI GCATC 3 cut(s) 175, 1204, 1330
BmuI ACTGGG 1 cut(s) 170
Bpu10I CCTNAGC 1 cut(s) 120
BpuEI CTTGAG 2 cut(s) 809, 1108
BpuMI CCSGG 2 cut(s) 689, 801
Bsa29I ATCGAT 1 cut(s) 913
BsaJI CCNNGG 1 cut(s) 209
BsaXI ACNNNNNCTCC 2 cut(s) 66, 96
Bsc4I CCNNNNNNNGG 4 cut(s) 98, 99, 290, 806
Bse1I ACTGG 5 cut(s) 109, 165, 510, 665, 823
BseBI CCWGG 2 cut(s) 210, 1263
BseCI ATCGAT 1 cut(s) 913
BseDI CCNNGG 1 cut(s) 209
BseGI GGATG 3 cut(s) 84, 1153, 1345
BseLI CCNNNNNNNGG 4 cut(s) 98, 99, 290, 806
BseMII CTCAG 5 cut(s) 47, 134, 299, 912, 1256
BseNI ACTGG 5 cut(s) 109, 165, 510, 665, 823
BseRI GAGGAG 1 cut(s) 273
BseXI GCAGC 2 cut(s) 1082, 1309
BsgI GTGCAG 1 cut(s) 530
BshFI GGCC 7 cut(s) 214, 310, 494, 546, 724, 1162, 1266
BshNI GGYRCC 1 cut(s) 324
BshVI ATCGAT 1 cut(s) 913
BsiSI CCGG 2 cut(s) 688, 800
BslFI GGGAC 2 cut(s) 115, 1286
BslI CCNNNNNNNGG 4 cut(s) 98, 99, 290, 806
BsmAI GTCTC 3 cut(s) 285, 705, 854
BsmFI GGGAC 2 cut(s) 115, 1286
BsnI GGCC 7 cut(s) 214, 310, 494, 546, 724, 1162, 1266
Bsp143I GATC 5 cut(s) 240, 550, 675, 931, 1083
BspACI CCGC 3 cut(s) 215, 495, 707
BspANI GGCC 7 cut(s) 214, 310, 494, 546, 724, 1162, 1266
BspCNI CTCAG 5 cut(s) 48, 133, 298, 913, 1255
BspDI ATCGAT 1 cut(s) 913
BspLI GGNNCC 1 cut(s) 326
BspPI GGATC 2 cut(s) 235, 1091
BspT107I GGYRCC 1 cut(s) 324
BsrBI CCGCTC 1 cut(s) 217
BsrI ACTGG 5 cut(s) 109, 165, 510, 665, 823
BssECI CCNNGG 1 cut(s) 209
BssMI GATC 5 cut(s) 240, 550, 675, 931, 1083
BssNAI GTATAC 1 cut(s) 784
BssSI CACGAG 1 cut(s) 1199
Bst1107I GTATAC 1 cut(s) 784
Bst2BI CACGAG 1 cut(s) 1199
Bst2UI CCWGG 2 cut(s) 210, 1263
Bst4CI ACNGT 5 cut(s) 67, 131, 371, 400, 735
Bst6I CTCTTC 1 cut(s) 1108
BstC8I GCNNGC 2 cut(s) 39, 762
BstDEI CTNAG 9 cut(s) 56, 120, 285, 434, 558, 921, 1009, 1131, 1242
BstF5I GGATG 3 cut(s) 84, 1153, 1345
BstKTI GATC 5 cut(s) 243, 553, 678, 934, 1086
BstMAI GTCTC 3 cut(s) 285, 705, 854
BstMBI GATC 5 cut(s) 240, 550, 675, 931, 1083
BstMWI GCNNNNNNNGC 3 cut(s) 214, 668, 1067
BstNI CCWGG 2 cut(s) 210, 1263
BstNSI RCATGY 2 cut(s) 41, 764
BstSCI CCNGG 4 cut(s) 208, 687, 799, 1261
BstSFI CTRYAG 1 cut(s) 1074
BstV1I GCAGC 2 cut(s) 1082, 1309
BstX2I RGATCY 2 cut(s) 240, 1083
BstXI CCANNNNNNTGG 1 cut(s) 635
BstYI RGATCY 2 cut(s) 240, 1083
BstZ17I GTATAC 1 cut(s) 784
Bsu15I ATCGAT 1 cut(s) 913
BsuI GTATCC 1 cut(s) 936
BsuRI GGCC 7 cut(s) 214, 310, 494, 546, 724, 1162, 1266
BsuTUI ATCGAT 1 cut(s) 913
BtsCI GGATG 3 cut(s) 84, 1153, 1345
BtsIMutI CAGTG 3 cut(s) 63, 136, 816
Cac8I GCNNGC 2 cut(s) 39, 762
Cfr13I GGNCC 4 cut(s) 212, 309, 544, 1161
ClaI ATCGAT 1 cut(s) 913
Csp6I GTAC 5 cut(s) 325, 692, 810, 938, 1093
CviAII CATG 6 cut(s) 38, 225, 761, 1042, 1318, 1336
CviQI GTAC 5 cut(s) 325, 692, 810, 938, 1093
DdeI CTNAG 9 cut(s) 56, 120, 285, 434, 558, 921, 1009, 1131, 1242
DpnI GATC 5 cut(s) 242, 552, 677, 933, 1085
DpnII GATC 5 cut(s) 240, 550, 675, 931, 1083
Eam1104I CTCTTC 1 cut(s) 1108
EarI CTCTTC 1 cut(s) 1108
Eco32I GATATC 1 cut(s) 959
Eco57I CTGAAG 1 cut(s) 1196
EcoRII CCWGG 2 cut(s) 208, 1261
EcoRV GATATC 1 cut(s) 959
EcoT22I ATGCAT 1 cut(s) 1047
FaeI CATG 6 cut(s) 41, 228, 764, 1045, 1321, 1339
FalI AAGNNNNNCTT 2 cut(s) 827, 859
FaqI GGGAC 2 cut(s) 115, 1286
FatI CATG 6 cut(s) 37, 224, 760, 1041, 1317, 1335
FauNDI CATATG 1 cut(s) 1065
FblI GTMKAC 2 cut(s) 783, 1103
Fnu4HI GCNGC 5 cut(s) 215, 495, 708, 1071, 1323
FokI GGATG 3 cut(s) 71, 1160, 1352
Fsp4HI GCNGC 5 cut(s) 215, 495, 708, 1071, 1323
FspBI CTAG 7 cut(s) 468, 608, 704, 999, 1053, 1169, 1305
GluI GCNGC 5 cut(s) 215, 495, 708, 1071, 1323
HaeIII GGCC 7 cut(s) 214, 310, 494, 546, 724, 1162, 1266
HapII CCGG 2 cut(s) 688, 800
Hin1II CATG 6 cut(s) 41, 228, 764, 1045, 1321, 1339
HinfI GANTC 5 cut(s) 251, 415, 438, 822, 1033
HpaII CCGG 2 cut(s) 688, 800
HphI GGTGA 3 cut(s) 388, 574, 841
Hpy166II GTNNAC 4 cut(s) 589, 643, 784, 1104
Hpy188I TCNGA 7 cut(s) 174, 184, 232, 288, 339, 577, 963
Hpy188III TCNNGA 6 cut(s) 248, 716, 929, 1087, 1110, 1201
Hpy8I GTNNAC 4 cut(s) 589, 643, 784, 1104
HpyAV CCTTC 2 cut(s) 610, 763
HpyCH4III ACNGT 5 cut(s) 67, 131, 371, 400, 735
HpyF10VI GCNNNNNNNGC 3 cut(s) 214, 668, 1067
HpyF3I CTNAG 9 cut(s) 56, 120, 285, 434, 558, 921, 1009, 1131, 1242
Hsp92II CATG 6 cut(s) 41, 228, 764, 1045, 1321, 1339
KpnI GGTACC 1 cut(s) 328
Kzo9I GATC 5 cut(s) 240, 550, 675, 931, 1083
LmnI GCTCC 1 cut(s) 74
Lsp1109I GCAGC 2 cut(s) 1082, 1309
LweI GCATC 3 cut(s) 175, 1204, 1330
MaeI CTAG 7 cut(s) 468, 608, 704, 999, 1053, 1169, 1305
MaeIII GTNAC 3 cut(s) 376, 470, 990
MalI GATC 5 cut(s) 242, 552, 677, 933, 1085
MbiI CCGCTC 1 cut(s) 217
MboI GATC 5 cut(s) 240, 550, 675, 931, 1083
MboII GAAGA 3 cut(s) 788, 987, 1125
MfeI CAATTG 1 cut(s) 78
MflI RGATCY 2 cut(s) 240, 1083
MluCI AATT 5 cut(s) 78, 340, 571, 981, 1254
MlyI GAGTC 5 cut(s) 245, 424, 432, 816, 1042
MmeI TCCRAC 4 cut(s) 197, 440, 526, 952
Mph1103I ATGCAT 1 cut(s) 1047
MroXI GAANNNNTTC 1 cut(s) 358
MseI TTAA 3 cut(s) 198, 744, 980
MslI CAYNNNNRTG 1 cut(s) 1146
MspA1I CMGCKG 1 cut(s) 1073
MspI CCGG 2 cut(s) 688, 800
MspR9I CCNGG 4 cut(s) 210, 689, 801, 1263
MunI CAATTG 1 cut(s) 78
MvaI CCWGG 2 cut(s) 210, 1263
MwoI GCNNNNNNNGC 3 cut(s) 214, 668, 1067
NciI CCSGG 2 cut(s) 689, 801
NdeI CATATG 1 cut(s) 1065
NdeII GATC 5 cut(s) 240, 550, 675, 931, 1083
NlaIII CATG 6 cut(s) 41, 228, 764, 1045, 1321, 1339
NlaIV GGNNCC 1 cut(s) 326
NmuCI GTSAC 2 cut(s) 376, 990
NsiI ATGCAT 1 cut(s) 1047
NspI RCATGY 2 cut(s) 41, 764
PaeI GCATGC 2 cut(s) 41, 764
PdmI GAANNNNTTC 1 cut(s) 358
PflFI GACNNNGTC 1 cut(s) 178
PfoI TCCNGGA 1 cut(s) 799
PkrI GCNGC 5 cut(s) 216, 496, 709, 1072, 1324
PleI GAGTC 5 cut(s) 245, 423, 432, 816, 1041
PpsI GAGTC 5 cut(s) 245, 423, 432, 816, 1041
PshBI ATTAAT 2 cut(s) 198, 980
PsiI TTATAA 1 cut(s) 345
Psp6I CCWGG 2 cut(s) 208, 1261
PspGI CCWGG 2 cut(s) 208, 1261
PspN4I GGNNCC 1 cut(s) 326
PspPI GGNCC 4 cut(s) 212, 309, 544, 1161
PsuI RGATCY 2 cut(s) 240, 1083
PsyI GACNNNGTC 1 cut(s) 178
PvuII CAGCTG 1 cut(s) 1073
RsaI GTAC 5 cut(s) 326, 693, 811, 939, 1094
RsaNI GTAC 5 cut(s) 325, 692, 810, 938, 1093
RseI CAYNNNNRTG 1 cut(s) 1146
SaqAI TTAA 3 cut(s) 198, 744, 980
SatI GCNGC 5 cut(s) 215, 495, 708, 1071, 1323
Sau3AI GATC 5 cut(s) 240, 550, 675, 931, 1083
Sau96I GGNCC 4 cut(s) 212, 309, 544, 1161
SchI GAGTC 5 cut(s) 245, 424, 432, 816, 1042
ScrFI CCNGG 4 cut(s) 210, 689, 801, 1263
SfaNI GCATC 3 cut(s) 175, 1204, 1330
SfcI CTRYAG 1 cut(s) 1074
SmiMI CAYNNNNRTG 1 cut(s) 1146
SmlI CTYRAG 2 cut(s) 824, 1087
SmoI CTYRAG 2 cut(s) 824, 1087
SphI GCATGC 2 cut(s) 41, 764
Sse9I AATT 5 cut(s) 78, 340, 571, 981, 1254
SsiI CCGC 3 cut(s) 215, 495, 707
SspI AATATT 2 cut(s) 305, 1279
SspMI CTAG 7 cut(s) 468, 608, 704, 999, 1053, 1169, 1305
StyD4I CCNGG 4 cut(s) 208, 687, 799, 1261
TaaI ACNGT 5 cut(s) 67, 131, 371, 400, 735
TaqI TCGA 2 cut(s) 873, 913
TasI AATT 5 cut(s) 78, 340, 571, 981, 1254
TauI GCSGC 3 cut(s) 217, 497, 710
Tru1I TTAA 3 cut(s) 198, 744, 980
Tru9I TTAA 3 cut(s) 198, 744, 980
TscAI CASTG 3 cut(s) 70, 136, 823
TseFI GTSAC 2 cut(s) 376, 990
TseI GCWGC 2 cut(s) 1070, 1322
Tsp45I GTSAC 2 cut(s) 376, 990
TspDTI ATGAA 6 cut(s) 248, 351, 666, 1030, 1306, 1324
TspGWI ACGGA 1 cut(s) 233
TspRI CASTG 3 cut(s) 70, 136, 823
Tth111I GACNNNGTC 1 cut(s) 178
VspI ATTAAT 2 cut(s) 198, 980
XceI RCATGY 2 cut(s) 41, 764
XmiI GTMKAC 2 cut(s) 783, 1103
XmnI GAANNNNTTC 1 cut(s) 358
XspI CTAG 7 cut(s) 468, 608, 704, 999, 1053, 1169, 1305
Zsp2I ATGCAT 1 cut(s) 1047
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.