Reverse transcriptase (RNA-dependent DNA polymerase)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 241 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1136, 1256 |
| AccI | GTMKAC | 2 cut(s) | 2645, 2696 |
| AccII | CGCG | 1 cut(s) | 1161 |
| AciI | CCGC | 2 cut(s) | 389, 2865 |
| AclWI | GGATC | 7 cut(s) | 95, 1240, 1376, 2059, 2170, 2481, 2610 |
| AcsI | RAATTY | 9 cut(s) | 492, 818, 927, 1070, 1083, 2126, 2302, 2625, 2661 |
| AcuI | CTGAAG | 1 cut(s) | 2802 |
| AcvI | CACGTG | 2 cut(s) | 1133, 1215 |
| AdeI | CACNNNGTG | 2 cut(s) | 2597, 2810 |
| AfaI | GTAC | 4 cut(s) | 309, 1789, 2101, 2892 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 53, 1136, 1191, 1256, 1888, 2657 |
| AhlI | ACTAGT | 2 cut(s) | 1495, 2509 |
| AjnI | CCWGG | 1 cut(s) | 1481 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 828, 860, 2288, 2320 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 816, 848, 1021, 1053 |
| AluBI | AGCT | 9 cut(s) | 258, 1103, 1545, 1711, 1740, 1987, 2266, 2879, 2947 |
| AluI | AGCT | 9 cut(s) | 258, 1103, 1545, 1711, 1740, 1987, 2266, 2879, 2947 |
| Alw21I | GWGCWC | 2 cut(s) | 1380, 1742 |
| Alw26I | GTCTC | 2 cut(s) | 1266, 2373 |
| AlwI | GGATC | 7 cut(s) | 95, 1240, 1376, 2059, 2170, 2481, 2610 |
| Ama87I | CYCGRG | 1 cut(s) | 1735 |
| AoxI | GGCC | 5 cut(s) | 234, 316, 632, 1152, 1902 |
| ApeKI | GCWGC | 2 cut(s) | 386, 1708 |
| ApoI | RAATTY | 9 cut(s) | 492, 818, 927, 1070, 1083, 2126, 2302, 2625, 2661 |
| AseI | ATTAAT | 1 cut(s) | 1253 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 396 |
| AspLEI | GCGC | 2 cut(s) | 685, 1161 |
| AspS9I | GGNCC | 4 cut(s) | 316, 1144, 1153, 1173 |
| AsuHPI | GGTGA | 8 cut(s) | 144, 344, 583, 1207, 1460, 1471, 2252, 2583 |
| AvaI | CYCGRG | 1 cut(s) | 1735 |
| AvaII | GGWCC | 2 cut(s) | 1144, 1173 |
| AxyI | CCTNAGG | 1 cut(s) | 1779 |
| BanI | GGYRCC | 1 cut(s) | 241 |
| BanII | GRGCYC | 1 cut(s) | 1742 |
| BauI | CACGAG | 2 cut(s) | 1311, 3017 |
| BbrPI | CACGTG | 2 cut(s) | 1133, 1215 |
| BbsI | GAAGAC | 2 cut(s) | 1755, 2766 |
| Bbv12I | GWGCWC | 2 cut(s) | 1380, 1742 |
| BbvI | GCAGC | 2 cut(s) | 398, 1720 |
| BceAI | ACGGC | 3 cut(s) | 213, 492, 2546 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 114, 148, 1657, 1691 |
| BciT130I | CCWGG | 1 cut(s) | 1483 |
| BciVI | GTATCC | 2 cut(s) | 1008, 1860 |
| BcoDI | GTCTC | 2 cut(s) | 1266, 2373 |
| BcuI | ACTAGT | 2 cut(s) | 1495, 2509 |
| BfmI | CTRYAG | 3 cut(s) | 867, 921, 1833 |
| BfuI | GTATCC | 2 cut(s) | 1008, 1860 |
| BisI | GCNGC | 2 cut(s) | 387, 1709 |
| BlsI | GCNGC | 2 cut(s) | 388, 1710 |
| BmcAI | AGTACT | 1 cut(s) | 309 |
| Bme1390I | CCNGG | 1 cut(s) | 1483 |
| Bme18I | GGWCC | 2 cut(s) | 1144, 1173 |
| BmeT110I | CYCGRG | 1 cut(s) | 1735 |
| BmgT120I | GGNCC | 4 cut(s) | 316, 1144, 1153, 1173 |
| BmiI | GGNNCC | 6 cut(s) | 243, 317, 452, 1145, 1146, 2481 |
| BmrFI | CCNGG | 1 cut(s) | 1483 |
| BmsI | GCATC | 3 cut(s) | 217, 892, 1665 |
| BpiI | GAAGAC | 2 cut(s) | 1755, 2766 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1546 |
| BpuEI | CTTGAG | 1 cut(s) | 1916 |
| Bsa29I | ATCGAT | 1 cut(s) | 1503 |
| BsaAI | YACGTR | 3 cut(s) | 1133, 1215, 2739 |
| BsaI | GGTCTC | 1 cut(s) | 1266 |
| BsaJI | CCNNGG | 4 cut(s) | 237, 446, 1149, 1482 |
| BsaWI | WCCGGW | 1 cut(s) | 1382 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1545, 1575 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 53, 1136, 1191, 1256, 1888, 2657 |
| Bse1I | ACTGG | 2 cut(s) | 1893, 2888 |
| Bse21I | CCTNAGG | 1 cut(s) | 1779 |
| Bse3DI | GCAATG | 1 cut(s) | 1596 |
| BseBI | CCWGG | 1 cut(s) | 1483 |
| BseCI | ATCGAT | 1 cut(s) | 1503 |
| BseDI | CCNNGG | 4 cut(s) | 237, 446, 1149, 1482 |
| BseGI | GGATG | 6 cut(s) | 1328, 1428, 1942, 2227, 2423, 2542 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 53, 1136, 1191, 1256, 1888, 2657 |
| BseMI | GCAATG | 1 cut(s) | 1596 |
| BseMII | CTCAG | 2 cut(s) | 1560, 2997 |
| BseNI | ACTGG | 2 cut(s) | 1893, 2888 |
| BseRI | GAGGAG | 2 cut(s) | 1299, 1913 |
| BseXI | GCAGC | 2 cut(s) | 398, 1720 |
| BseYI | CCCAGC | 1 cut(s) | 2413 |
| Bsh1236I | CGCG | 1 cut(s) | 1161 |
| BshFI | GGCC | 5 cut(s) | 236, 318, 634, 1154, 1904 |
| BshNI | GGYRCC | 1 cut(s) | 241 |
| BshVI | ATCGAT | 1 cut(s) | 1503 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1380, 1742 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1735 |
| BsiSI | CCGG | 1 cut(s) | 1383 |
| BslFI | GGGAC | 4 cut(s) | 949, 1130, 1166, 1185 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 53, 1136, 1191, 1256, 1888, 2657 |
| BsmAI | GTCTC | 2 cut(s) | 1266, 2373 |
| BsmFI | GGGAC | 4 cut(s) | 949, 1130, 1166, 1185 |
| BsmI | GAATGC | 1 cut(s) | 2587 |
| BsnI | GGCC | 5 cut(s) | 236, 318, 634, 1154, 1904 |
| Bso31I | GGTCTC | 1 cut(s) | 1266 |
| BsoBI | CYCGRG | 1 cut(s) | 1735 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1380, 1742 |
| BspACI | CCGC | 2 cut(s) | 389, 2865 |
| BspANI | GGCC | 5 cut(s) | 236, 318, 634, 1154, 1904 |
| BspCNI | CTCAG | 2 cut(s) | 1559, 2996 |
| BspDI | ATCGAT | 1 cut(s) | 1503 |
| BspFNI | CGCG | 1 cut(s) | 1161 |
| BspHI | TCATGA | 1 cut(s) | 301 |
| BspLI | GGNNCC | 6 cut(s) | 243, 317, 452, 1145, 1146, 2481 |
| BspPI | GGATC | 7 cut(s) | 95, 1240, 1376, 2059, 2170, 2481, 2610 |
| BspT107I | GGYRCC | 1 cut(s) | 241 |
| BspTNI | GGTCTC | 1 cut(s) | 1266 |
| BsrDI | GCAATG | 1 cut(s) | 1596 |
| BsrI | ACTGG | 2 cut(s) | 1893, 2888 |
| BssECI | CCNNGG | 4 cut(s) | 237, 446, 1149, 1482 |
| BssSI | CACGAG | 2 cut(s) | 1311, 3017 |
| BssT1I | CCWWGG | 3 cut(s) | 237, 446, 1149 |
| Bst2BI | CACGAG | 2 cut(s) | 1311, 3017 |
| Bst2UI | CCWGG | 1 cut(s) | 1483 |
| Bst4CI | ACNGT | 6 cut(s) | 52, 98, 1657, 2099, 2428, 2973 |
| Bst6I | CTCTTC | 1 cut(s) | 2247 |
| BstBAI | YACGTR | 3 cut(s) | 1133, 1215, 2739 |
| BstC8I | GCNNGC | 2 cut(s) | 1113, 2411 |
| BstDEI | CTNAG | 4 cut(s) | 311, 1546, 1779, 2983 |
| BstF5I | GGATG | 6 cut(s) | 1328, 1428, 1942, 2227, 2423, 2542 |
| BstFNI | CGCG | 1 cut(s) | 1161 |
| BstHHI | GCGC | 2 cut(s) | 685, 1161 |
| BstMAI | GTCTC | 2 cut(s) | 1266, 2373 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1705 |
| BstNI | CCWGG | 1 cut(s) | 1483 |
| BstNSI | RCATGY | 3 cut(s) | 125, 281, 2413 |
| BstSCI | CCNGG | 1 cut(s) | 1481 |
| BstSFI | CTRYAG | 3 cut(s) | 867, 921, 1833 |
| BstUI | CGCG | 1 cut(s) | 1161 |
| BstV1I | GCAGC | 2 cut(s) | 398, 1720 |
| BstV2I | GAAGAC | 2 cut(s) | 1755, 2766 |
| BstX2I | RGATCY | 2 cut(s) | 1232, 1368 |
| BstYI | RGATCY | 2 cut(s) | 1232, 1368 |
| Bsu15I | ATCGAT | 1 cut(s) | 1503 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1779 |
| BsuI | GTATCC | 2 cut(s) | 1008, 1860 |
| BsuRI | GGCC | 5 cut(s) | 236, 318, 634, 1154, 1904 |
| BsuTUI | ATCGAT | 1 cut(s) | 1503 |
| BtgZI | GCGATG | 1 cut(s) | 1176 |
| BtsCI | GGATG | 6 cut(s) | 1328, 1428, 1942, 2227, 2423, 2542 |
| BtsIMutI | CAGTG | 2 cut(s) | 103, 1886 |
| Cac8I | GCNNGC | 2 cut(s) | 1113, 2411 |
| CciI | TCATGA | 1 cut(s) | 301 |
| CfoI | GCGC | 2 cut(s) | 685, 1161 |
| Cfr13I | GGNCC | 4 cut(s) | 316, 1144, 1153, 1173 |
| ClaI | ATCGAT | 1 cut(s) | 1503 |
| Csp6I | GTAC | 4 cut(s) | 308, 1788, 2100, 2891 |
| CviQI | GTAC | 4 cut(s) | 308, 1788, 2100, 2891 |
| DdeI | CTNAG | 4 cut(s) | 311, 1546, 1779, 2983 |
| DraI | TTTAAA | 1 cut(s) | 673 |
| DraIII | CACNNNGTG | 2 cut(s) | 2597, 2810 |
| Eam1104I | CTCTTC | 1 cut(s) | 2247 |
| EarI | CTCTTC | 1 cut(s) | 2247 |
| Ecl136II | GAGCTC | 1 cut(s) | 1740 |
| Eco130I | CCWWGG | 3 cut(s) | 237, 446, 1149 |
| Eco147I | AGGCCT | 1 cut(s) | 1904 |
| Eco24I | GRGCYC | 1 cut(s) | 1742 |
| Eco31I | GGTCTC | 1 cut(s) | 1266 |
| Eco32I | GATATC | 1 cut(s) | 2501 |
| Eco47I | GGWCC | 2 cut(s) | 1144, 1173 |
| Eco53kI | GAGCTC | 1 cut(s) | 1740 |
| Eco57I | CTGAAG | 1 cut(s) | 2802 |
| Eco72I | CACGTG | 2 cut(s) | 1133, 1215 |
| Eco81I | CCTNAGG | 1 cut(s) | 1779 |
| Eco88I | CYCGRG | 1 cut(s) | 1735 |
| EcoICRI | GAGCTC | 1 cut(s) | 1740 |
| EcoO109I | RGGNCCY | 3 cut(s) | 316, 1144, 1173 |
| EcoRII | CCWGG | 1 cut(s) | 1481 |
| EcoRV | GATATC | 1 cut(s) | 2501 |
| EcoT14I | CCWWGG | 3 cut(s) | 237, 446, 1149 |
| EcoT22I | ATGCAT | 2 cut(s) | 885, 2589 |
| EcoT38I | GRGCYC | 1 cut(s) | 1742 |
| ErhI | CCWWGG | 3 cut(s) | 237, 446, 1149 |
| FaqI | GGGAC | 4 cut(s) | 949, 1130, 1166, 1185 |
| FauNDI | CATATG | 1 cut(s) | 1558 |
| FblI | GTMKAC | 2 cut(s) | 2645, 2696 |
| Fnu4HI | GCNGC | 2 cut(s) | 387, 1709 |
| FokI | GGATG | 6 cut(s) | 1335, 1435, 1949, 2234, 2430, 2529 |
| FriOI | GRGCYC | 1 cut(s) | 1742 |
| Fsp4HI | GCNGC | 2 cut(s) | 387, 1709 |
| GlaI | GCGC | 2 cut(s) | 684, 1160 |
| GluI | GCNGC | 2 cut(s) | 387, 1709 |
| GsaI | CCCAGC | 1 cut(s) | 2417 |
| HaeIII | GGCC | 5 cut(s) | 236, 318, 634, 1154, 1904 |
| HapII | CCGG | 1 cut(s) | 1383 |
| HhaI | GCGC | 2 cut(s) | 685, 1161 |
| Hin6I | GCGC | 2 cut(s) | 683, 1159 |
| HinP1I | GCGC | 2 cut(s) | 683, 1159 |
| HincII | GTYRAC | 1 cut(s) | 2488 |
| HindII | GTYRAC | 1 cut(s) | 2488 |
| HinfI | GANTC | 9 cut(s) | 43, 264, 1198, 1208, 1351, 1438, 1912, 2825, 3111 |
| HpaII | CCGG | 1 cut(s) | 1383 |
| HphI | GGTGA | 8 cut(s) | 144, 344, 583, 1207, 1460, 1471, 2252, 2583 |
| Hpy166II | GTNNAC | 7 cut(s) | 1293, 2059, 2431, 2488, 2646, 2697, 2980 |
| Hpy188III | TCNNGA | 7 cut(s) | 302, 792, 1735, 2293, 2352, 2471, 2477 |
| Hpy8I | GTNNAC | 7 cut(s) | 1293, 2059, 2431, 2488, 2646, 2697, 2980 |
| Hpy99I | CGWCG | 1 cut(s) | 471 |
| HpyCH4III | ACNGT | 6 cut(s) | 52, 98, 1657, 2099, 2428, 2973 |
| HpyCH4IV | ACGT | 4 cut(s) | 1132, 1214, 2374, 2738 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1705 |
| HpyF3I | CTNAG | 4 cut(s) | 311, 1546, 1779, 2983 |
| HpySE526I | ACGT | 4 cut(s) | 1132, 1214, 2374, 2738 |
| HspAI | GCGC | 2 cut(s) | 683, 1159 |
| KflI | GGGWCCC | 1 cut(s) | 1144 |
| LmnI | GCTCC | 5 cut(s) | 63, 1108, 1410, 1553, 1984 |
| Lsp1109I | GCAGC | 2 cut(s) | 398, 1720 |
| LweI | GCATC | 3 cut(s) | 217, 892, 1665 |
| MaeII | ACGT | 4 cut(s) | 1132, 1214, 2374, 2738 |
| MaeIII | GTNAC | 8 cut(s) | 578, 1021, 1425, 1978, 2154, 2197, 2680, 2734 |
| MflI | RGATCY | 2 cut(s) | 1232, 1368 |
| MhlI | GDGCHC | 2 cut(s) | 1380, 1742 |
| MlyI | GAGTC | 3 cut(s) | 1202, 1207, 3120 |
| MmeI | TCCRAC | 3 cut(s) | 71, 509, 2701 |
| Mph1103I | ATGCAT | 2 cut(s) | 885, 2589 |
| MroXI | GAANNNNTTC | 1 cut(s) | 396 |
| MslI | CAYNNNNRTG | 5 cut(s) | 276, 1242, 1806, 1962, 2174 |
| MspA1I | CMGCKG | 1 cut(s) | 389 |
| MspI | CCGG | 1 cut(s) | 1383 |
| MspR9I | CCNGG | 1 cut(s) | 1483 |
| Mva1269I | GAATGC | 1 cut(s) | 2587 |
| MvaI | CCWGG | 1 cut(s) | 1483 |
| MvnI | CGCG | 1 cut(s) | 1161 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1705 |
| NdeI | CATATG | 1 cut(s) | 1558 |
| NlaIV | GGNNCC | 6 cut(s) | 243, 317, 452, 1145, 1146, 2481 |
| NmeAIII | GCCGAG | 2 cut(s) | 1606, 1692 |
| NmuCI | GTSAC | 3 cut(s) | 2154, 2197, 2680 |
| NsiI | ATGCAT | 2 cut(s) | 885, 2589 |
| NspI | RCATGY | 3 cut(s) | 125, 281, 2413 |
| PaeI | GCATGC | 1 cut(s) | 2413 |
| PaeR7I | CTCGAG | 1 cut(s) | 1735 |
| PagI | TCATGA | 1 cut(s) | 301 |
| PceI | AGGCCT | 1 cut(s) | 1904 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1220 |
| PctI | GAATGC | 1 cut(s) | 2587 |
| PdmI | GAANNNNTTC | 1 cut(s) | 396 |
| PfeI | GAWTC | 6 cut(s) | 43, 264, 1351, 1438, 1912, 2825 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1136, 1256 |
| PkrI | GCNGC | 2 cut(s) | 388, 1710 |
| PleI | GAGTC | 3 cut(s) | 1202, 1206, 3119 |
| PmaCI | CACGTG | 2 cut(s) | 1133, 1215 |
| PmlI | CACGTG | 2 cut(s) | 1133, 1215 |
| PpsI | GAGTC | 3 cut(s) | 1202, 1206, 3119 |
| Ppu21I | YACGTR | 3 cut(s) | 1133, 1215, 2739 |
| PpuMI | RGGWCCY | 2 cut(s) | 1144, 1173 |
| PshBI | ATTAAT | 1 cut(s) | 1253 |
| Psp124BI | GAGCTC | 1 cut(s) | 1742 |
| Psp5II | RGGWCCY | 2 cut(s) | 1144, 1173 |
| Psp6I | CCWGG | 1 cut(s) | 1481 |
| PspCI | CACGTG | 2 cut(s) | 1133, 1215 |
| PspFI | CCCAGC | 1 cut(s) | 2413 |
| PspGI | CCWGG | 1 cut(s) | 1481 |
| PspN4I | GGNNCC | 6 cut(s) | 243, 317, 452, 1145, 1146, 2481 |
| PspPI | GGNCC | 4 cut(s) | 316, 1144, 1153, 1173 |
| PspPPI | RGGWCCY | 2 cut(s) | 1144, 1173 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1320, 1352 |
| PsuI | RGATCY | 2 cut(s) | 1232, 1368 |
| RsaI | GTAC | 4 cut(s) | 309, 1789, 2101, 2892 |
| RsaNI | GTAC | 4 cut(s) | 308, 1788, 2100, 2891 |
| RseI | CAYNNNNRTG | 5 cut(s) | 276, 1242, 1806, 1962, 2174 |
| SacI | GAGCTC | 1 cut(s) | 1742 |
| SatI | GCNGC | 2 cut(s) | 387, 1709 |
| Sau96I | GGNCC | 4 cut(s) | 316, 1144, 1153, 1173 |
| ScaI | AGTACT | 1 cut(s) | 309 |
| SchI | GAGTC | 3 cut(s) | 1202, 1207, 3120 |
| ScrFI | CCNGG | 1 cut(s) | 1483 |
| SduI | GDGCHC | 2 cut(s) | 1380, 1742 |
| SfaNI | GCATC | 3 cut(s) | 217, 892, 1665 |
| SfcI | CTRYAG | 3 cut(s) | 867, 921, 1833 |
| Sfr274I | CTCGAG | 1 cut(s) | 1735 |
| SinI | GGWCC | 2 cut(s) | 1144, 1173 |
| SlaI | CTCGAG | 1 cut(s) | 1735 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 276, 1242, 1806, 1962, 2174 |
| SmlI | CTYRAG | 2 cut(s) | 1735, 1895 |
| SmoI | CTYRAG | 2 cut(s) | 1735, 1895 |
| SpeI | ACTAGT | 2 cut(s) | 1495, 2509 |
| SphI | GCATGC | 1 cut(s) | 2413 |
| SseBI | AGGCCT | 1 cut(s) | 1904 |
| SsiI | CCGC | 2 cut(s) | 389, 2865 |
| SspI | AATATT | 9 cut(s) | 689, 977, 1774, 2321, 2453, 2551, 3055, 3071, 3095 |
| SstI | GAGCTC | 1 cut(s) | 1742 |
| StuI | AGGCCT | 1 cut(s) | 1904 |
| StyD4I | CCNGG | 1 cut(s) | 1481 |
| StyI | CCWWGG | 3 cut(s) | 237, 446, 1149 |
| TaaI | ACNGT | 6 cut(s) | 52, 98, 1657, 2099, 2428, 2973 |
| TaiI | ACGT | 4 cut(s) | 1135, 1217, 2377, 2741 |
| TaqI | TCGA | 7 cut(s) | 931, 1223, 1503, 1736, 2292, 2344, 2787 |
| TatI | WGTACW | 3 cut(s) | 307, 1787, 2890 |
| TfiI | GAWTC | 6 cut(s) | 43, 264, 1351, 1438, 1912, 2825 |
| TscAI | CASTG | 2 cut(s) | 103, 1893 |
| TseFI | GTSAC | 3 cut(s) | 2154, 2197, 2680 |
| TseI | GCWGC | 2 cut(s) | 386, 1708 |
| Tsp45I | GTSAC | 3 cut(s) | 2154, 2197, 2680 |
| TspGWI | ACGGA | 3 cut(s) | 630, 1997, 2264 |
| TspRI | CASTG | 2 cut(s) | 103, 1893 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1136, 1256 |
| VpaK11BI | GGWCC | 2 cut(s) | 1144, 1173 |
| VspI | ATTAAT | 1 cut(s) | 1253 |
| XapI | RAATTY | 9 cut(s) | 492, 818, 927, 1070, 1083, 2126, 2302, 2625, 2661 |
| XbaI | TCTAGA | 2 cut(s) | 791, 2351 |
| XceI | RCATGY | 3 cut(s) | 125, 281, 2413 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1137 |
| XhoI | CTCGAG | 1 cut(s) | 1735 |
| XmiI | GTMKAC | 2 cut(s) | 2645, 2696 |
| XmnI | GAANNNNTTC | 1 cut(s) | 396 |
| ZrmI | AGTACT | 1 cut(s) | 309 |
| Zsp2I | ATGCAT | 2 cut(s) | 885, 2589 |