FvH4_4g14842

Reverse transcriptase (RNA-dependent DNA polymerase)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000071
Physical Location & Seq
Reverse (-)
18485365 .. 18486525
1161 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g14842.t1

Sequence Viewer

Length: 1161 bp
ATGTCCCTGCCACCAGGGCTCCGGCGACAGGGGGAGGATGGCATGGTTTGTCGCCTTCACAAGTCACTATATGGCCTGAAACAAGCTTCTCGCCAATGGTTTGCCAAGTTTACTGAAGCCATTCGATCTGCGGGTTTTGTGCAATCTCGAGCAGACTATTCTCTCTTCACCAAGAAACAAGGCAAGTCCTTTACTGCTCTTTTGATATATGTCGACGATATATTGATTACTGGAAATGATCATCAAGGTATTGCTGCCACTAAAAAATTCCTGCATAGTCATTTTCATATCAAGGATCTTGGTGACTTAAAATACTTTCTTGGCATTGAGGTTTCTGCTTCTGAAAATGGGATTTTTATTTCCCAACGTAAATATGCACTGGAGATTATTGAGGATGCAGGACTATTGGGCGCAGCCCCTATTGATACACCAATGGAACGAAGTTTAAAATTGTCTGATAAGACTGAATTGCTCAAAGATCAAGGTCGCTACAGGAGATTGGTTGGAAGACTAATATATTTGACTGTTTCAAGACCGGACATTACTTATGCAGTTCATGTCTTGAGTCGGTTTATGCATGAACCGAGAAAAGCTCATATGGAGGCGGCACTTAGAGTAGTGCGTTACCTCAAGAGTGCTCCTGGTCAAGGTCTCTTTTTCTCCTCCAACAATGATCTGAAACTGAGAGCATTTTGTGATTCGGATTGGGCAGGCTGCCCACTTACTAGACGTTCCACTACAGGATACTGTGTGTTTCTTGGACCTTCATTAATCTCTTGGAGATCAAAGCGTCAGAAAACTGTATCTCTTTCATCGGCAGAGGCAGAATATCGTGCTATGACTGGAACATGTTGTGAGTTAACATGGCTGCGATACTTACTTAGAGACTTGGGAATAATGCATCATGAACCTGCCTCCTTATATTGTGACAATAAAGCAGCACTGCACATAGCAGCGAATCCGGTGTTTCATGAACGAACCAGGCACATTGAGATGGATTGCCATTATATCAGAGATAAAATTCAAGACGGATCTATTGTTACAAGATTCGTGAGTTCATCACATCAGTTGGCAGACGTTTTGACCAAAGCTTTGGGGAAGGAAACTTTTGTTCCCATGATACGCAAGTTGGGAGTGCAGGATATCCACTCTCCAACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2 Retrotran_gag_3 Retrotrans_gag

Protein Analysis

387

Amino Acids

43.68

Weight (kDa)

9.43

Isoelectric Point (pI)

48.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_2 PF07727 2 - 146 1.6e-35 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000071)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G23160 AT4G23160
fragaria_vesca FvH4_2g08111 FvH4_2g17332 FvH4_2g18071 FvH4_2g20531 FvH4_2g20842 FvH4_2g20842 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g24231 FvH4_2g24232 FvH4_3g00831 FvH4_3g00831 FvH4_3g03561 FvH4_3g03561 FvH4_3g10282 FvH4_3g18165 FvH4_3g19021 FvH4_3g24071 FvH4_3g33123 FvH4_3g33970 FvH4_3g38851 FvH4_3g39133 FvH4_3g39271 FvH4_4g00981 FvH4_4g08191 FvH4_4g08311 FvH4_4g08311 FvH4_4g08311 FvH4_4g09341 FvH4_4g12550 FvH4_4g12550 FvH4_4g12550 FvH4_4g13391 FvH4_4g14842 FvH4_4g27901 FvH4_5g11561 FvH4_5g15611 FvH4_5g17991 FvH4_5g27871 FvH4_5g29995 FvH4_5g39662 FvH4_6g02392 FvH4_6g12781 FvH4_6g20106 FvH4_6g20106 FvH4_6g20106 FvH4_6g30872 FvH4_6g34901 FvH4_6g35632 FvH4_6g36661 FvH4_6g43795 FvH4_6g44611 FvH4_7g01791 FvH4_7g04041 FvH4_7g12551 FvH4_7g23351
malus_domestica MD00G1134200.v1.1 MD01G1096500.v1.1 MD01G1128200.v1.1 MD02G1250500.v1.1 MD02G1294900.v1.1 MD03G1121800.v1.1 MD04G1021400.v1.1 MD04G1051100.v1.1 MD04G1051300.v1.1 MD04G1099000.v1.1 MD05G1047900.v1.1 MD05G1298000.v1.1 MD06G1064200.v1.1 MD06G1120600.v1.1 MD07G1013900.v1.1 MD09G1226900.v1.1 MD10G1196700.v1.1 MD10G1307000.v1.1 MD10G1338900.v1.1 MD11G1107300.v1.1 MD11G1138300.v1.1 MD11G1236700.v1.1 MD12G1032500.v1.1 MD12G1150100.v1.1 MD12G1247800.v1.1 MD17G1267900.v1.1
pyrus_communis pycom02g03660 pycom02g13370 pycom02g14840 pycom02g18400 pycom02g18880 pycom02g22740 pycom04g08800 pycom04g15770 pycom05g07980 pycom05g19640 pycom06g09360 pycom07g13160 pycom08g11820 pycom08g21740 pycom09g19980 pycom10g04810 pycom10g05420 pycom10g14650 pycom11g03140 pycom11g21550 pycom12g14740 pycom13g01600 pycom13g29510 pycom14g07060 pycom15g01990 pycom15g19850 pycom15g30860 pycom16g15290 pycom16g16250 pycom16g25390 pycom17g17270 pycom520g00070
rosa_chinensis RchiOBHm_Chr1g0316691 RchiOBHm_Chr1g0320751 RchiOBHm_Chr1g0320771 RchiOBHm_Chr1g0322231 RchiOBHm_Chr1g0322861 RchiOBHm_Chr1g0328471 RchiOBHm_Chr1g0333321 RchiOBHm_Chr1g0337871 RchiOBHm_Chr1g0339051 RchiOBHm_Chr1g0349861 RchiOBHm_Chr1g0361951 RchiOBHm_Chr1g0365931 RchiOBHm_Chr1g0365981 RchiOBHm_Chr1g0377711 RchiOBHm_Chr1g0381581 RchiOBHm_Chr1g0382741 RchiOBHm_Chr1g0383501 RchiOBHm_Chr2g0101201 RchiOBHm_Chr2g0113601 RchiOBHm_Chr2g0124031 RchiOBHm_Chr2g0135481 RchiOBHm_Chr2g0148361 RchiOBHm_Chr2g0150101 RchiOBHm_Chr2g0154181 RchiOBHm_Chr2g0156071 RchiOBHm_Chr2g0166521 RchiOBHm_Chr2g0166821 RchiOBHm_Chr3g0448011 RchiOBHm_Chr3g0450941 RchiOBHm_Chr3g0450961 RchiOBHm_Chr3g0451051 RchiOBHm_Chr3g0451721 RchiOBHm_Chr3g0453371 RchiOBHm_Chr3g0454881 RchiOBHm_Chr3g0457421 RchiOBHm_Chr3g0457661 RchiOBHm_Chr3g0460011 RchiOBHm_Chr3g0461531 RchiOBHm_Chr3g0461981 RchiOBHm_Chr3g0463471 RchiOBHm_Chr3g0466641 RchiOBHm_Chr3g0468181 RchiOBHm_Chr3g0483351 RchiOBHm_Chr4g0394001 RchiOBHm_Chr4g0397261 RchiOBHm_Chr4g0404531 RchiOBHm_Chr4g0410841 RchiOBHm_Chr4g0415501 RchiOBHm_Chr4g0425221 RchiOBHm_Chr4g0430811 RchiOBHm_Chr5g0010831 RchiOBHm_Chr5g0016831 RchiOBHm_Chr5g0016851 RchiOBHm_Chr5g0031351 RchiOBHm_Chr5g0032151 RchiOBHm_Chr5g0041201 RchiOBHm_Chr5g0042191 RchiOBHm_Chr5g0064121 RchiOBHm_Chr5g0066601 RchiOBHm_Chr5g0078371 RchiOBHm_Chr5g0079271 RchiOBHm_Chr6g0263751 RchiOBHm_Chr6g0285111 RchiOBHm_Chr6g0298961 RchiOBHm_Chr6g0300481 RchiOBHm_Chr6g0303211 RchiOBHm_Chr7g0192341 RchiOBHm_Chr7g0196171 RchiOBHm_Chr7g0200281 RchiOBHm_Chr7g0200551 RchiOBHm_Chr7g0207611 RchiOBHm_Chr7g0212421 RchiOBHm_Chr7g0214991 RchiOBHm_Chr7g0219211 RchiOBHm_Chr7g0242371
rosa_laevigata RLG00000002389 RLG00000007980
rosa_roxburghii Rroxscaffold_1G00053480 Rroxscaffold_2G00090890 Rroxscaffold_2G00099660 Rroxscaffold_2G00134510 Rroxscaffold_3G00221450 Rroxscaffold_3G00240550 Rroxscaffold_4G00305710 Rroxscaffold_4G00306360 Rroxscaffold_4G00306800 Rroxscaffold_4G00329090 Rroxscaffold_5G00382750 Rroxscaffold_5G00385900 Rroxscaffold_6G00403080 Rroxscaffold_7G00172890 Rroxscaffold_7G00186690
rosa_samantha Rh1DG425600
rosa_wichuraiana Rw0G001640 Rw0G009160 Rw0G010480 Rw0G010520 Rw0G013850 Rw0G017170 Rw0G018520 Rw0G019280 Rw0G022780 Rw1G000360 Rw1G001410 Rw1G001630 Rw1G002100 Rw1G006810 Rw1G010680 Rw1G012700 Rw1G016160 Rw1G022180 Rw1G023580 Rw1G025640 Rw1G026310 Rw1G027230 Rw1G028110 Rw1G034180 Rw2G004990 Rw2G005840 Rw2G007350 Rw2G024730 Rw2G025580 Rw2G026670 Rw2G027210 Rw2G029060 Rw2G031560 Rw2G042190 Rw2G043850 Rw2G045990 Rw2G046130 Rw2G049290 Rw2G049310 Rw2G049790 Rw2G052250 Rw3G004350 Rw3G013100 Rw3G015280 Rw3G015720 Rw3G024630 Rw3G026470 Rw3G027840 Rw3G028960 Rw3G029130 Rw3G029160 Rw4G000280 Rw4G006650 Rw4G008970 Rw4G009310 Rw4G011730 Rw4G012000 Rw4G012610 Rw4G014300 Rw4G014690 Rw4G015190 Rw4G016470 Rw4G020750 Rw4G025060 Rw4G025080 Rw5G005610 Rw5G010380 Rw5G013970 Rw5G015130 Rw5G015250 Rw5G017640 Rw5G019910 Rw5G022410 Rw5G023550 Rw5G029710 Rw5G037650 Rw5G038280 Rw5G038570 Rw5G041550 Rw5G042600 Rw5G043910 Rw5G047850 Rw5G048200 Rw5G049920 Rw6G000260 Rw6G000530 Rw6G001710 Rw6G005090 Rw6G006730 Rw6G009310 Rw6G010950 Rw6G011630 Rw6G012080 Rw6G012750 Rw6G015970 Rw6G020700 Rw6G024350 Rw7G008540 Rw7G016620 Rw7G019400 Rw7G020010 Rw7G024240 Rw7G025630 Rw7G027550 Rw7G027770 Rw7G027960 Rw7G028450 Rw7G031280 Rw7G031970 Rw7G032180 Rw7G033590 Rw7G033720 Rw7G033890 Rw7G041800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 919
AccI GTMKAC 1 cut(s) 213
AciI CCGC 2 cut(s) 131, 605
AclWI GGATC 2 cut(s) 303, 1039
AcsI RAATTY 2 cut(s) 266, 1020
AcuI CTGAAG 1 cut(s) 135
AfiI CCNNNNNNNGG 2 cut(s) 28, 647
AflIII ACRYGT 1 cut(s) 848
AgsI TTSAA 2 cut(s) 531, 1025
AjnI CCWGG 3 cut(s) 13, 640, 980
AluBI AGCT 3 cut(s) 86, 593, 1091
AluI AGCT 3 cut(s) 86, 593, 1091
Alw21I GWGCWC 1 cut(s) 640
Alw26I GTCTC 2 cut(s) 656, 879
AlwI GGATC 2 cut(s) 303, 1039
Ama87I CYCGRG 1 cut(s) 147
AoxI GGCC 1 cut(s) 73
ApeKI GCWGC 6 cut(s) 254, 413, 714, 868, 938, 953
ApoI RAATTY 2 cut(s) 266, 1020
ArsI GACNNNNNNTTYG 2 cut(s) 1075, 1107
AseI ATTAAT 1 cut(s) 770
Asp700I GAANNNNTTC 1 cut(s) 120
AspLEI GCGC 1 cut(s) 413
AspS9I GGNCC 1 cut(s) 761
AsuHPI GGTGA 2 cut(s) 160, 314
AvaI CYCGRG 1 cut(s) 147
AvaII GGWCC 1 cut(s) 761
BaeI ACNNNNGTAYC 2 cut(s) 1112, 1145
BanII GRGCYC 1 cut(s) 21
BbsI GAAGAC 1 cut(s) 514
Bbv12I GWGCWC 1 cut(s) 640
BbvI GCAGC 6 cut(s) 241, 425, 701, 855, 950, 965
BccI CCATC 2 cut(s) 32, 988
BciT130I CCWGG 3 cut(s) 15, 642, 982
BciVI GTATCC 1 cut(s) 737
BclI TGATCA 1 cut(s) 238
BcoDI GTCTC 2 cut(s) 656, 879
BfaI CTAG 1 cut(s) 726
BfmI CTRYAG 2 cut(s) 490, 738
BfuAI ACCTGC 1 cut(s) 919
BfuI GTATCC 1 cut(s) 737
BglI GCCNNNNNGGC 1 cut(s) 16
BisI GCNGC 7 cut(s) 255, 414, 606, 715, 869, 939, 954
BlsI GCNGC 7 cut(s) 256, 415, 607, 716, 870, 940, 955
Bme1390I CCNGG 3 cut(s) 15, 642, 982
Bme18I GGWCC 1 cut(s) 761
BmeT110I CYCGRG 1 cut(s) 147
BmgT120I GGNCC 1 cut(s) 761
BmiI GGNNCC 1 cut(s) 20
BmrFI CCNGG 3 cut(s) 15, 642, 982
BmsI GCATC 2 cut(s) 385, 910
BpiI GAAGAC 1 cut(s) 514
BplI GAGNNNNNCTC 2 cut(s) 577, 609
BpmI CTGGAG 1 cut(s) 401
BpuEI CTTGAG 2 cut(s) 583, 614
BsaI GGTCTC 1 cut(s) 656
BsaJI CCNNGG 1 cut(s) 14
BsaWI WCCGGW 2 cut(s) 535, 961
BsaXI ACNNNNNCTCC 1 cut(s) 33
Bsc4I CCNNNNNNNGG 2 cut(s) 28, 647
Bse1I ACTGG 3 cut(s) 235, 384, 847
BseBI CCWGG 3 cut(s) 15, 642, 982
BseDI CCNNGG 1 cut(s) 14
BseGI GGATG 2 cut(s) 43, 400
BseLI CCNNNNNNNGG 2 cut(s) 28, 647
BseMII CTCAG 1 cut(s) 674
BseNI ACTGG 3 cut(s) 235, 384, 847
BseRI GAGGAG 1 cut(s) 652
BseXI GCAGC 6 cut(s) 241, 425, 701, 855, 950, 965
BsgI GTGCAG 2 cut(s) 929, 1157
BshFI GGCC 1 cut(s) 75
BsiHKAI GWGCWC 1 cut(s) 640
BsiHKCI CYCGRG 1 cut(s) 147
BsiSI CCGG 3 cut(s) 22, 536, 962
BslI CCNNNNNNNGG 2 cut(s) 28, 647
BsmAI GTCTC 2 cut(s) 656, 879
BsnI GGCC 1 cut(s) 75
Bso31I GGTCTC 1 cut(s) 656
BsoBI CYCGRG 1 cut(s) 147
Bsp1286I GDGCHC 2 cut(s) 21, 640
Bsp143I GATC 7 cut(s) 125, 238, 295, 478, 673, 782, 1031
BspACI CCGC 2 cut(s) 131, 605
BspANI GGCC 1 cut(s) 75
BspCNI CTCAG 1 cut(s) 675
BspHI TCATGA 2 cut(s) 904, 970
BspLI GGNNCC 1 cut(s) 20
BspMI ACCTGC 1 cut(s) 919
BspPI GGATC 2 cut(s) 303, 1039
BspTNI GGTCTC 1 cut(s) 656
BsrI ACTGG 3 cut(s) 235, 384, 847
BssECI CCNNGG 1 cut(s) 14
BssMI GATC 7 cut(s) 125, 238, 295, 478, 673, 782, 1031
Bst2UI CCWGG 3 cut(s) 15, 642, 982
Bst4CI ACNGT 3 cut(s) 526, 749, 802
Bst6I CTCTTC 1 cut(s) 170
BstC8I GCNNGC 1 cut(s) 712
BstDEI CTNAG 3 cut(s) 611, 683, 881
BstENI CCTNNNNNAGG 1 cut(s) 645
BstF5I GGATG 2 cut(s) 43, 400
BstHHI GCGC 1 cut(s) 413
BstKTI GATC 7 cut(s) 128, 241, 298, 481, 676, 785, 1034
BstMAI GTCTC 2 cut(s) 656, 879
BstMBI GATC 7 cut(s) 125, 238, 295, 478, 673, 782, 1031
BstMWI GCNNNNNNNGC 1 cut(s) 16
BstNI CCWGG 3 cut(s) 15, 642, 982
BstNSI RCATGY 1 cut(s) 852
BstSCI CCNGG 3 cut(s) 13, 640, 980
BstSFI CTRYAG 2 cut(s) 490, 738
BstV1I GCAGC 6 cut(s) 241, 425, 701, 855, 950, 965
BstV2I GAAGAC 1 cut(s) 514
BstX2I RGATCY 2 cut(s) 295, 1031
BstXI CCANNNNNNTGG 1 cut(s) 1093
BstYI RGATCY 2 cut(s) 295, 1031
BsuI GTATCC 1 cut(s) 737
BsuRI GGCC 1 cut(s) 75
BtsCI GGATG 2 cut(s) 43, 400
BtsI GCAGTG 1 cut(s) 941
BtsIMutI CAGTG 2 cut(s) 377, 941
BveI ACCTGC 1 cut(s) 919
Cac8I GCNNGC 1 cut(s) 712
CciI TCATGA 2 cut(s) 904, 970
CfoI GCGC 1 cut(s) 413
Cfr13I GGNCC 1 cut(s) 761
CseI GACGC 1 cut(s) 779
CviAII CATG 8 cut(s) 43, 557, 578, 849, 864, 905, 971, 1117
CviJI RGCY 9 cut(s) 19, 75, 86, 119, 416, 593, 714, 868, 1091
CviKI_1 RGCY 9 cut(s) 19, 75, 86, 119, 416, 593, 714, 868, 1091
DdeI CTNAG 3 cut(s) 611, 683, 881
DpnI GATC 7 cut(s) 127, 240, 297, 480, 675, 784, 1033
DpnII GATC 7 cut(s) 125, 238, 295, 478, 673, 782, 1031
DraI TTTAAA 1 cut(s) 447
Eam1104I CTCTTC 1 cut(s) 170
EarI CTCTTC 1 cut(s) 170
Eco24I GRGCYC 1 cut(s) 21
Eco31I GGTCTC 1 cut(s) 656
Eco32I GATATC 1 cut(s) 1144
Eco47I GGWCC 1 cut(s) 761
Eco57I CTGAAG 1 cut(s) 135
Eco88I CYCGRG 1 cut(s) 147
EcoNI CCTNNNNNAGG 1 cut(s) 645
EcoRII CCWGG 3 cut(s) 13, 640, 980
EcoRV GATATC 1 cut(s) 1144
EcoT22I ATGCAT 2 cut(s) 579, 903
EcoT38I GRGCYC 1 cut(s) 21
FaeI CATG 8 cut(s) 46, 560, 581, 852, 867, 908, 974, 1120
FatI CATG 8 cut(s) 42, 556, 577, 848, 863, 904, 970, 1116
FauI CCCGC 1 cut(s) 124
FauNDI CATATG 1 cut(s) 597
FbaI TGATCA 1 cut(s) 238
FblI GTMKAC 1 cut(s) 213
Fnu4HI GCNGC 7 cut(s) 255, 414, 606, 715, 869, 939, 954
FokI GGATG 2 cut(s) 50, 407
FriOI GRGCYC 1 cut(s) 21
Fsp4HI GCNGC 7 cut(s) 255, 414, 606, 715, 869, 939, 954
FspBI CTAG 1 cut(s) 726
GlaI GCGC 1 cut(s) 412
GluI GCNGC 7 cut(s) 255, 414, 606, 715, 869, 939, 954
GsuI CTGGAG 1 cut(s) 401
HaeIII GGCC 1 cut(s) 75
HapII CCGG 3 cut(s) 22, 536, 962
HgaI GACGC 1 cut(s) 779
HhaI GCGC 1 cut(s) 413
Hin1II CATG 8 cut(s) 46, 560, 581, 852, 867, 908, 974, 1120
Hin6I GCGC 1 cut(s) 411
HinP1I GCGC 1 cut(s) 411
HincII GTYRAC 2 cut(s) 214, 861
HindII GTYRAC 2 cut(s) 214, 861
HindIII AAGCTT 2 cut(s) 84, 1089
HinfI GANTC 4 cut(s) 565, 698, 958, 1047
HpaI GTTAAC 1 cut(s) 861
HpaII CCGG 3 cut(s) 22, 536, 962
HphI GGTGA 2 cut(s) 160, 314
Hpy166II GTNNAC 3 cut(s) 111, 214, 861
Hpy188I TCNGA 6 cut(s) 343, 457, 678, 703, 795, 1013
Hpy188III TCNNGA 8 cut(s) 147, 531, 562, 631, 905, 971, 1025, 1051
Hpy8I GTNNAC 3 cut(s) 111, 214, 861
Hpy99I CGWCG 1 cut(s) 218
HpyAV CCTTC 3 cut(s) 65, 774, 1093
HpyCH4III ACNGT 3 cut(s) 526, 749, 802
HpyCH4IV ACGT 3 cut(s) 367, 730, 1077
HpyCH4V TGCA 9 cut(s) 142, 274, 377, 398, 551, 577, 901, 946, 1138
HpyF10VI GCNNNNNNNGC 1 cut(s) 16
HpyF3I CTNAG 3 cut(s) 611, 683, 881
HpySE526I ACGT 3 cut(s) 367, 730, 1077
Hsp92II CATG 8 cut(s) 46, 560, 581, 852, 867, 908, 974, 1120
HspAI GCGC 1 cut(s) 411
Ksp22I TGATCA 1 cut(s) 238
KspAI GTTAAC 1 cut(s) 861
Kzo9I GATC 7 cut(s) 125, 238, 295, 478, 673, 782, 1031
LmnI GCTCC 2 cut(s) 24, 643
Lsp1109I GCAGC 6 cut(s) 241, 425, 701, 855, 950, 965
LweI GCATC 2 cut(s) 385, 910
MaeI CTAG 1 cut(s) 726
MaeII ACGT 3 cut(s) 367, 730, 1077
MaeIII GTNAC 5 cut(s) 63, 302, 623, 926, 1039
MalI GATC 7 cut(s) 127, 240, 297, 480, 675, 784, 1033
MboI GATC 7 cut(s) 125, 238, 295, 478, 673, 782, 1031
MboII GAAGA 2 cut(s) 157, 519
MflI RGATCY 2 cut(s) 295, 1031
MhlI GDGCHC 2 cut(s) 21, 640
MluCI AATT 4 cut(s) 266, 449, 467, 1020
MlyI GAGTC 1 cut(s) 574
MmeI TCCRAC 2 cut(s) 484, 690
MnlI CCTC 8 cut(s) 28, 322, 385, 595, 638, 673, 814, 925
Mph1103I ATGCAT 2 cut(s) 579, 903
MroXI GAANNNNTTC 1 cut(s) 120
MseI TTAA 4 cut(s) 308, 446, 770, 860
MslI CAYNNNNRTG 1 cut(s) 992
MspI CCGG 3 cut(s) 22, 536, 962
MspR9I CCNGG 3 cut(s) 15, 642, 982
MvaI CCWGG 3 cut(s) 15, 642, 982
MwoI GCNNNNNNNGC 1 cut(s) 16
NdeI CATATG 1 cut(s) 597
NdeII GATC 7 cut(s) 125, 238, 295, 478, 673, 782, 1031
NlaIII CATG 8 cut(s) 46, 560, 581, 852, 867, 908, 974, 1120
NlaIV GGNNCC 1 cut(s) 20
NmuCI GTSAC 3 cut(s) 63, 302, 926
NsiI ATGCAT 2 cut(s) 579, 903
NspI RCATGY 1 cut(s) 852
PaeR7I CTCGAG 1 cut(s) 147
PagI TCATGA 2 cut(s) 904, 970
PciI ACATGT 1 cut(s) 848
PdmI GAANNNNTTC 1 cut(s) 120
PfeI GAWTC 3 cut(s) 698, 958, 1047
PkrI GCNGC 7 cut(s) 256, 415, 607, 716, 870, 940, 955
PleI GAGTC 1 cut(s) 573
PpsI GAGTC 1 cut(s) 573
PscI ACATGT 1 cut(s) 848
PshBI ATTAAT 1 cut(s) 770
Psp6I CCWGG 3 cut(s) 13, 640, 980
PspGI CCWGG 3 cut(s) 13, 640, 980
PspN4I GGNNCC 1 cut(s) 20
PspPI GGNCC 1 cut(s) 761
PsuI RGATCY 2 cut(s) 295, 1031
RseI CAYNNNNRTG 1 cut(s) 992
SalI GTCGAC 1 cut(s) 212
SaqAI TTAA 4 cut(s) 308, 446, 770, 860
SatI GCNGC 7 cut(s) 255, 414, 606, 715, 869, 939, 954
Sau3AI GATC 7 cut(s) 125, 238, 295, 478, 673, 782, 1031
Sau96I GGNCC 1 cut(s) 761
SchI GAGTC 1 cut(s) 574
ScrFI CCNGG 3 cut(s) 15, 642, 982
SduI GDGCHC 2 cut(s) 21, 640
SfaNI GCATC 2 cut(s) 385, 910
SfcI CTRYAG 2 cut(s) 490, 738
Sfr274I CTCGAG 1 cut(s) 147
SinI GGWCC 1 cut(s) 761
SlaI CTCGAG 1 cut(s) 147
SmiMI CAYNNNNRTG 1 cut(s) 992
SmlI CTYRAG 3 cut(s) 147, 562, 629
SmoI CTYRAG 3 cut(s) 147, 562, 629
Sse9I AATT 4 cut(s) 266, 449, 467, 1020
SsiI CCGC 2 cut(s) 131, 605
SspMI CTAG 1 cut(s) 726
StyD4I CCNGG 3 cut(s) 13, 640, 980
TaaI ACNGT 3 cut(s) 526, 749, 802
TaiI ACGT 3 cut(s) 370, 733, 1080
TaqI TCGA 3 cut(s) 124, 148, 213
TasI AATT 4 cut(s) 266, 449, 467, 1020
TauI GCSGC 1 cut(s) 608
TfiI GAWTC 3 cut(s) 698, 958, 1047
Tru1I TTAA 4 cut(s) 308, 446, 770, 860
Tru9I TTAA 4 cut(s) 308, 446, 770, 860
TscAI CASTG 2 cut(s) 384, 948
TseFI GTSAC 3 cut(s) 63, 302, 926
TseI GCWGC 6 cut(s) 254, 413, 714, 868, 938, 953
Tsp45I GTSAC 3 cut(s) 63, 302, 926
TspDTI ATGAA 9 cut(s) 275, 545, 594, 756, 801, 921, 959, 987, 1047
TspGWI ACGGA 1 cut(s) 1044
TspRI CASTG 2 cut(s) 384, 948
VpaK11BI GGWCC 1 cut(s) 761
VspI ATTAAT 1 cut(s) 770
XagI CCTNNNNNAGG 1 cut(s) 645
XapI RAATTY 2 cut(s) 266, 1020
XceI RCATGY 1 cut(s) 852
XhoI CTCGAG 1 cut(s) 147
XmiI GTMKAC 1 cut(s) 213
XmnI GAANNNNTTC 1 cut(s) 120
XspI CTAG 1 cut(s) 726
Zsp2I ATGCAT 2 cut(s) 579, 903
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.