Reverse transcriptase (RNA-dependent DNA polymerase)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 78, 201, 2337 |
| AarI | CACCTGC | 1 cut(s) | 3431 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3851 |
| Acc36I | ACCTGC | 1 cut(s) | 3431 |
| Acc65I | GGTACC | 1 cut(s) | 1990 |
| AccB1I | GGYRCC | 2 cut(s) | 681, 1990 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2276 |
| AccI | GTMKAC | 2 cut(s) | 2532, 3464 |
| AccII | CGCG | 1 cut(s) | 3824 |
| AciI | CCGC | 3 cut(s) | 1585, 3335, 3822 |
| AclWI | GGATC | 8 cut(s) | 969, 1776, 1785, 1915, 2381, 2394, 2889, 3330 |
| AcoI | YGGCCR | 1 cut(s) | 2666 |
| AcsI | RAATTY | 8 cut(s) | 49, 187, 203, 465, 2656, 2734, 3022, 3381 |
| AcuI | CTGAAG | 5 cut(s) | 1142, 1703, 2080, 2325, 2991 |
| AdeI | CACNNNGTG | 3 cut(s) | 2819, 3317, 3578 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1383, 2276, 2371, 2822 |
| AflII | CTTAAG | 1 cut(s) | 2804 |
| AflIII | ACRYGT | 3 cut(s) | 109, 1712, 1727 |
| AgeI | ACCGGT | 1 cut(s) | 2479 |
| AgsI | TTSAA | 9 cut(s) | 276, 283, 1333, 1474, 2016, 2383, 2662, 3037, 3361 |
| AhlI | ACTAGT | 2 cut(s) | 1955, 3229 |
| AjnI | CCWGG | 3 cut(s) | 1234, 1941, 2743 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 3161, 3193, 3595, 3627 |
| AluBI | AGCT | 8 cut(s) | 279, 1244, 2100, 2163, 2461, 2651, 3671, 3751 |
| AluI | AGCT | 8 cut(s) | 279, 1244, 2100, 2163, 2461, 2651, 3671, 3751 |
| Alw21I | GWGCWC | 4 cut(s) | 107, 156, 659, 1955 |
| Alw26I | GTCTC | 6 cut(s) | 1077, 2065, 2107, 3093, 3258, 3623 |
| Alw44I | GTGCAC | 3 cut(s) | 103, 152, 655 |
| AlwI | GGATC | 8 cut(s) | 969, 1776, 1785, 1915, 2381, 2394, 2889, 3330 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2103 |
| Ama87I | CYCGRG | 2 cut(s) | 2164, 2364 |
| AoxI | GGCC | 8 cut(s) | 584, 1385, 1678, 2091, 2376, 2666, 2922, 3351 |
| ApaLI | GTGCAC | 3 cut(s) | 103, 152, 655 |
| ApeKI | GCWGC | 9 cut(s) | 117, 561, 604, 735, 798, 897, 2651, 3002, 3332 |
| ApoI | RAATTY | 8 cut(s) | 49, 187, 203, 465, 2656, 2734, 3022, 3381 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1557, 1589 |
| AseI | ATTAAT | 1 cut(s) | 933 |
| AsiGI | ACCGGT | 1 cut(s) | 2479 |
| Asp718I | GGTACC | 1 cut(s) | 1990 |
| AspA2I | CCTAGG | 1 cut(s) | 3370 |
| AspLEI | GCGC | 2 cut(s) | 136, 561 |
| AspS9I | GGNCC | 2 cut(s) | 748, 1385 |
| AvaI | CYCGRG | 2 cut(s) | 2164, 2364 |
| AvaII | GGWCC | 1 cut(s) | 748 |
| AvrII | CCTAGG | 1 cut(s) | 3370 |
| AxyI | CCTNAGG | 2 cut(s) | 2202, 2466 |
| BaeGI | GKGCMC | 3 cut(s) | 107, 156, 659 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1919, 1952, 2211, 2244 |
| BalI | TGGCCA | 1 cut(s) | 2668 |
| BamHI | GGATCC | 1 cut(s) | 2386 |
| BanI | GGYRCC | 2 cut(s) | 681, 1990 |
| BauI | CACGAG | 2 cut(s) | 1637, 2817 |
| Bbv12I | GWGCWC | 4 cut(s) | 107, 156, 659, 1955 |
| BbvI | GCAGC | 9 cut(s) | 129, 548, 616, 747, 785, 884, 2638, 3014, 3344 |
| BccI | CCATC | 9 cut(s) | 174, 1134, 1492, 1544, 1933, 2416, 2487, 2914, 3167 |
| BceAI | ACGGC | 5 cut(s) | 444, 571, 611, 669, 1672 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2798, 2832 |
| BciT130I | CCWGG | 3 cut(s) | 1236, 1943, 2745 |
| BciVI | GTATCC | 2 cut(s) | 1149, 2331 |
| BclI | TGATCA | 1 cut(s) | 1963 |
| BcoDI | GTCTC | 6 cut(s) | 1077, 2065, 2107, 3093, 3258, 3623 |
| BcuI | ACTAGT | 2 cut(s) | 1955, 3229 |
| BfaI | CTAG | 8 cut(s) | 503, 1956, 2160, 3072, 3230, 3315, 3371, 3672 |
| BfmI | CTRYAG | 1 cut(s) | 2214 |
| BfrI | CTTAAG | 1 cut(s) | 2804 |
| BfuAI | ACCTGC | 1 cut(s) | 3431 |
| BfuI | GTATCC | 2 cut(s) | 1149, 2331 |
| BlnI | CCTAGG | 1 cut(s) | 3370 |
| BmcAI | AGTACT | 3 cut(s) | 1039, 1402, 2212 |
| Bme1390I | CCNGG | 3 cut(s) | 1236, 1943, 2745 |
| Bme18I | GGWCC | 1 cut(s) | 748 |
| BmeT110I | CYCGRG | 2 cut(s) | 2164, 2364 |
| BmgT120I | GGNCC | 2 cut(s) | 748, 1385 |
| BmiI | GGNNCC | 6 cut(s) | 683, 925, 1113, 1233, 1992, 2388 |
| BmrFI | CCNGG | 3 cut(s) | 1236, 1943, 2745 |
| BmsI | GCATC | 7 cut(s) | 121, 129, 486, 1306, 1325, 2131, 2366 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1867, 2057 |
| BpmI | CTGGAG | 3 cut(s) | 2592, 2727, 3773 |
| BpuEI | CTTGAG | 1 cut(s) | 2826 |
| Bsa29I | ATCGAT | 1 cut(s) | 1780 |
| BsaAI | YACGTR | 3 cut(s) | 1715, 2256, 3507 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1446 |
| BsaJI | CCNNGG | 4 cut(s) | 1381, 1942, 2744, 3370 |
| BsaWI | WCCGGW | 2 cut(s) | 2479, 2768 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 2013, 2043, 2590, 2620, 3607, 3637 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1383, 2276, 2371, 2822 |
| Bse118I | RCCGGY | 1 cut(s) | 2479 |
| Bse1I | ACTGG | 4 cut(s) | 680, 2057, 2609, 3207 |
| Bse21I | CCTNAGG | 2 cut(s) | 2202, 2466 |
| Bse3DI | GCAATG | 3 cut(s) | 713, 2412, 3648 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1446 |
| BseBI | CCWGG | 3 cut(s) | 1236, 1943, 2745 |
| BseCI | ATCGAT | 1 cut(s) | 1780 |
| BseDI | CCNNGG | 4 cut(s) | 1381, 1942, 2744, 3370 |
| BseGI | GGATG | 6 cut(s) | 1444, 1888, 2047, 2416, 2985, 3143 |
| BseJI | GATNNNNATC | 1 cut(s) | 1446 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1383, 2276, 2371, 2822 |
| BseMI | GCAATG | 3 cut(s) | 713, 2412, 3648 |
| BseMII | CTCAG | 5 cut(s) | 1523, 1595, 2102, 2193, 3675 |
| BseNI | ACTGG | 4 cut(s) | 680, 2057, 2609, 3207 |
| BseRI | GAGGAG | 2 cut(s) | 2387, 2866 |
| BseSI | GKGCMC | 3 cut(s) | 107, 156, 659 |
| BseXI | GCAGC | 9 cut(s) | 129, 548, 616, 747, 785, 884, 2638, 3014, 3344 |
| BseYI | CCCAGC | 1 cut(s) | 3133 |
| BsgI | GTGCAG | 2 cut(s) | 784, 2841 |
| Bsh1236I | CGCG | 1 cut(s) | 3824 |
| BshFI | GGCC | 8 cut(s) | 586, 1387, 1680, 2093, 2378, 2668, 2924, 3353 |
| BshNI | GGYRCC | 2 cut(s) | 681, 1990 |
| BshTI | ACCGGT | 1 cut(s) | 2479 |
| BshVI | ATCGAT | 1 cut(s) | 1780 |
| BsiHKAI | GWGCWC | 4 cut(s) | 107, 156, 659, 1955 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2164, 2364 |
| BsiSI | CCGG | 2 cut(s) | 2480, 2769 |
| BslFI | GGGAC | 2 cut(s) | 1108, 2065 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1383, 2276, 2371, 2822 |
| BsmAI | GTCTC | 6 cut(s) | 1077, 2065, 2107, 3093, 3258, 3623 |
| BsmFI | GGGAC | 2 cut(s) | 1108, 2065 |
| BsmI | GAATGC | 1 cut(s) | 1795 |
| BsnI | GGCC | 8 cut(s) | 586, 1387, 1680, 2093, 2378, 2668, 2924, 3353 |
| BsoBI | CYCGRG | 2 cut(s) | 2164, 2364 |
| Bsp1286I | GDGCHC | 4 cut(s) | 107, 156, 659, 1955 |
| Bsp1407I | TGTACA | 1 cut(s) | 1736 |
| BspACI | CCGC | 3 cut(s) | 1585, 3335, 3822 |
| BspANI | GGCC | 8 cut(s) | 586, 1387, 1680, 2093, 2378, 2668, 2924, 3353 |
| BspCNI | CTCAG | 5 cut(s) | 1522, 1596, 2103, 2194, 3676 |
| BspDI | ATCGAT | 1 cut(s) | 1780 |
| BspFNI | CGCG | 1 cut(s) | 3824 |
| BspLI | GGNNCC | 6 cut(s) | 683, 925, 1113, 1233, 1992, 2388 |
| BspMI | ACCTGC | 1 cut(s) | 3431 |
| BspPI | GGATC | 8 cut(s) | 969, 1776, 1785, 1915, 2381, 2394, 2889, 3330 |
| BspT107I | GGYRCC | 2 cut(s) | 681, 1990 |
| BspTI | CTTAAG | 1 cut(s) | 2804 |
| BsrDI | GCAATG | 3 cut(s) | 713, 2412, 3648 |
| BsrFI | RCCGGY | 1 cut(s) | 2479 |
| BsrGI | TGTACA | 1 cut(s) | 1736 |
| BsrI | ACTGG | 4 cut(s) | 680, 2057, 2609, 3207 |
| BssAI | RCCGGY | 1 cut(s) | 2479 |
| BssECI | CCNNGG | 4 cut(s) | 1381, 1942, 2744, 3370 |
| BssSI | CACGAG | 2 cut(s) | 1637, 2817 |
| BssT1I | CCWWGG | 2 cut(s) | 1381, 3370 |
| Bst2BI | CACGAG | 2 cut(s) | 1637, 2817 |
| Bst2UI | CCWGG | 3 cut(s) | 1236, 1943, 2745 |
| Bst4CI | ACNGT | 8 cut(s) | 316, 511, 661, 1069, 2077, 2629, 2679, 3777 |
| Bst6I | CTCTTC | 1 cut(s) | 2715 |
| BstAFI | CTTAAG | 1 cut(s) | 2804 |
| BstAUI | TGTACA | 1 cut(s) | 1736 |
| BstBAI | YACGTR | 3 cut(s) | 1715, 2256, 3507 |
| BstC8I | GCNNGC | 3 cut(s) | 1154, 1314, 2108 |
| BstDEI | CTNAG | 9 cut(s) | 1197, 1509, 1604, 2111, 2202, 2466, 3684, 3711, 3787 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2820 |
| BstF5I | GGATG | 6 cut(s) | 1444, 1888, 2047, 2416, 2985, 3143 |
| BstFNI | CGCG | 1 cut(s) | 3824 |
| BstHHI | GCGC | 2 cut(s) | 136, 561 |
| BstMAI | GTCTC | 6 cut(s) | 1077, 2065, 2107, 3093, 3258, 3623 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1584, 2354 |
| BstNI | CCWGG | 3 cut(s) | 1236, 1943, 2745 |
| BstNSI | RCATGY | 6 cut(s) | 113, 1316, 1731, 2028, 3133, 3719 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1867, 2057 |
| BstSCI | CCNGG | 3 cut(s) | 1234, 1941, 2743 |
| BstSFI | CTRYAG | 1 cut(s) | 2214 |
| BstSLI | GKGCMC | 3 cut(s) | 107, 156, 659 |
| BstSNI | TACGTA | 1 cut(s) | 2256 |
| BstUI | CGCG | 1 cut(s) | 3824 |
| BstV1I | GCAGC | 9 cut(s) | 129, 548, 616, 747, 785, 884, 2638, 3014, 3344 |
| BstX2I | RGATCY | 1 cut(s) | 2386 |
| BstYI | RGATCY | 1 cut(s) | 2386 |
| Bsu15I | ATCGAT | 1 cut(s) | 1780 |
| Bsu36I | CCTNAGG | 2 cut(s) | 2202, 2466 |
| BsuI | GTATCC | 2 cut(s) | 1149, 2331 |
| BsuRI | GGCC | 8 cut(s) | 586, 1387, 1680, 2093, 2378, 2668, 2924, 3353 |
| BsuTUI | ATCGAT | 1 cut(s) | 1780 |
| BtsCI | GGATG | 6 cut(s) | 1444, 1888, 2047, 2416, 2985, 3143 |
| BtsI | GCAGTG | 1 cut(s) | 614 |
| BtsIMutI | CAGTG | 5 cut(s) | 614, 818, 1074, 1518, 2669 |
| BveI | ACCTGC | 1 cut(s) | 3431 |
| Cac8I | GCNNGC | 3 cut(s) | 1154, 1314, 2108 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2103 |
| CfoI | GCGC | 2 cut(s) | 136, 561 |
| Cfr10I | RCCGGY | 1 cut(s) | 2479 |
| Cfr13I | GGNCC | 2 cut(s) | 748, 1385 |
| ClaI | ATCGAT | 1 cut(s) | 1780 |
| CspAI | ACCGGT | 1 cut(s) | 2479 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 839, 874 |
| DdeI | CTNAG | 9 cut(s) | 1197, 1509, 1604, 2111, 2202, 2466, 3684, 3711, 3787 |
| DraI | TTTAAA | 1 cut(s) | 3628 |
| DraIII | CACNNNGTG | 3 cut(s) | 2819, 3317, 3578 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3851 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3851 |
| EaeI | YGGCCR | 1 cut(s) | 2666 |
| Eam1104I | CTCTTC | 1 cut(s) | 2715 |
| EarI | CTCTTC | 1 cut(s) | 2715 |
| Eco105I | TACGTA | 1 cut(s) | 2256 |
| Eco130I | CCWWGG | 2 cut(s) | 1381, 3370 |
| Eco147I | AGGCCT | 1 cut(s) | 2378 |
| Eco32I | GATATC | 2 cut(s) | 819, 3221 |
| Eco47I | GGWCC | 1 cut(s) | 748 |
| Eco57I | CTGAAG | 5 cut(s) | 1142, 1703, 2080, 2325, 2991 |
| Eco81I | CCTNAGG | 2 cut(s) | 2202, 2466 |
| Eco88I | CYCGRG | 2 cut(s) | 2164, 2364 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2820 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1385 |
| EcoRI | GAATTC | 1 cut(s) | 187 |
| EcoRII | CCWGG | 3 cut(s) | 1234, 1941, 2743 |
| EcoRV | GATATC | 2 cut(s) | 819, 3221 |
| EcoT14I | CCWWGG | 2 cut(s) | 1381, 3370 |
| EcoT22I | ATGCAT | 1 cut(s) | 1318 |
| ErhI | CCWWGG | 2 cut(s) | 1381, 3370 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1959, 1991, 3783, 3815 |
| FaqI | GGGAC | 2 cut(s) | 1108, 2065 |
| FauNDI | CATATG | 6 cut(s) | 740, 766, 966, 1741, 3327, 3405 |
| FbaI | TGATCA | 1 cut(s) | 1963 |
| FblI | GTMKAC | 2 cut(s) | 2532, 3464 |
| FokI | GGATG | 6 cut(s) | 1451, 1895, 2054, 2423, 2992, 3150 |
| FspBI | CTAG | 8 cut(s) | 503, 1956, 2160, 3072, 3230, 3315, 3371, 3672 |
| GlaI | GCGC | 2 cut(s) | 135, 560 |
| GsaI | CCCAGC | 1 cut(s) | 3137 |
| GsuI | CTGGAG | 3 cut(s) | 2592, 2727, 3773 |
| HaeIII | GGCC | 8 cut(s) | 586, 1387, 1680, 2093, 2378, 2668, 2924, 3353 |
| HapII | CCGG | 2 cut(s) | 2480, 2769 |
| HhaI | GCGC | 2 cut(s) | 136, 561 |
| Hin6I | GCGC | 2 cut(s) | 134, 559 |
| HinP1I | GCGC | 2 cut(s) | 134, 559 |
| HincII | GTYRAC | 4 cut(s) | 547, 831, 2032, 3208 |
| HindII | GTYRAC | 4 cut(s) | 547, 831, 2032, 3208 |
| HindIII | AAGCTT | 1 cut(s) | 277 |
| HpaI | GTTAAC | 1 cut(s) | 3208 |
| HpaII | CCGG | 2 cut(s) | 2480, 2769 |
| Hpy99I | CGWCG | 1 cut(s) | 1305 |
| HpyCH4III | ACNGT | 8 cut(s) | 316, 511, 661, 1069, 2077, 2629, 2679, 3777 |
| HpyCH4IV | ACGT | 5 cut(s) | 1714, 2255, 2872, 3094, 3506 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1584, 2354 |
| HpyF3I | CTNAG | 9 cut(s) | 1197, 1509, 1604, 2111, 2202, 2466, 3684, 3711, 3787 |
| HpySE526I | ACGT | 5 cut(s) | 1714, 2255, 2872, 3094, 3506 |
| HspAI | GCGC | 2 cut(s) | 134, 559 |
| KpnI | GGTACC | 1 cut(s) | 1994 |
| Ksp22I | TGATCA | 1 cut(s) | 1963 |
| KspAI | GTTAAC | 1 cut(s) | 3208 |
| LmnI | GCTCC | 4 cut(s) | 1058, 2021, 2458, 3886 |
| Lsp1109I | GCAGC | 9 cut(s) | 129, 548, 616, 747, 785, 884, 2638, 3014, 3344 |
| LweI | GCATC | 7 cut(s) | 121, 129, 486, 1306, 1325, 2131, 2366 |
| MaeI | CTAG | 8 cut(s) | 503, 1956, 2160, 3072, 3230, 3315, 3371, 3672 |
| MaeII | ACGT | 5 cut(s) | 1714, 2255, 2872, 3094, 3506 |
| MfeI | CAATTG | 2 cut(s) | 650, 837 |
| MflI | RGATCY | 1 cut(s) | 2386 |
| MhlI | GDGCHC | 4 cut(s) | 107, 156, 659, 1955 |
| MlsI | TGGCCA | 1 cut(s) | 2668 |
| MluNI | TGGCCA | 1 cut(s) | 2668 |
| MlyI | GAGTC | 3 cut(s) | 365, 3625, 3839 |
| MmeI | TCCRAC | 5 cut(s) | 272, 708, 1036, 2737, 3469 |
| Mox20I | TGGCCA | 1 cut(s) | 2668 |
| Mph1103I | ATGCAT | 1 cut(s) | 1318 |
| MscI | TGGCCA | 1 cut(s) | 2668 |
| MslI | CAYNNNNRTG | 2 cut(s) | 743, 2436 |
| Msp20I | TGGCCA | 1 cut(s) | 2668 |
| MspA1I | CMGCKG | 1 cut(s) | 3335 |
| MspCI | CTTAAG | 1 cut(s) | 2804 |
| MspI | CCGG | 2 cut(s) | 2480, 2769 |
| MspR9I | CCNGG | 3 cut(s) | 1236, 1943, 2745 |
| MunI | CAATTG | 2 cut(s) | 650, 837 |
| Mva1269I | GAATGC | 1 cut(s) | 1795 |
| MvaI | CCWGG | 3 cut(s) | 1236, 1943, 2745 |
| MvnI | CGCG | 1 cut(s) | 3824 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1584, 2354 |
| NdeI | CATATG | 6 cut(s) | 740, 766, 966, 1741, 3327, 3405 |
| NlaIV | GGNNCC | 6 cut(s) | 683, 925, 1113, 1233, 1992, 2388 |
| NmeAIII | GCCGAG | 2 cut(s) | 3031, 3580 |
| NmuCI | GTSAC | 4 cut(s) | 1873, 2790, 2873, 3448 |
| NsiI | ATGCAT | 1 cut(s) | 1318 |
| NspI | RCATGY | 6 cut(s) | 113, 1316, 1731, 2028, 3133, 3719 |
| PaeI | GCATGC | 1 cut(s) | 1316 |
| PaeR7I | CTCGAG | 1 cut(s) | 2164 |
| PaqCI | CACCTGC | 1 cut(s) | 3431 |
| PceI | AGGCCT | 1 cut(s) | 2378 |
| PciI | ACATGT | 2 cut(s) | 109, 1727 |
| PctI | GAATGC | 1 cut(s) | 1795 |
| PfeI | GAWTC | 9 cut(s) | 947, 1004, 1614, 1759, 2525, 2966, 3345, 3589, 3688 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2276 |
| PfoI | TCCNGGA | 1 cut(s) | 1234 |
| PinAI | ACCGGT | 1 cut(s) | 2479 |
| PleI | GAGTC | 3 cut(s) | 364, 3624, 3839 |
| PpsI | GAGTC | 3 cut(s) | 364, 3624, 3839 |
| Ppu21I | YACGTR | 3 cut(s) | 1715, 2256, 3507 |
| PscI | ACATGT | 2 cut(s) | 109, 1727 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1867, 2057 |
| PshBI | ATTAAT | 1 cut(s) | 933 |
| PsiI | TTATAA | 3 cut(s) | 78, 201, 2337 |
| Psp6I | CCWGG | 3 cut(s) | 1234, 1941, 2743 |
| PspFI | CCCAGC | 1 cut(s) | 3133 |
| PspGI | CCWGG | 3 cut(s) | 1234, 1941, 2743 |
| PspN4I | GGNNCC | 6 cut(s) | 683, 925, 1113, 1233, 1992, 2388 |
| PspPI | GGNCC | 2 cut(s) | 748, 1385 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2103 |
| PsuI | RGATCY | 1 cut(s) | 2386 |
| RseI | CAYNNNNRTG | 2 cut(s) | 743, 2436 |
| Sau96I | GGNCC | 2 cut(s) | 748, 1385 |
| ScaI | AGTACT | 3 cut(s) | 1039, 1402, 2212 |
| SchI | GAGTC | 3 cut(s) | 365, 3625, 3839 |
| ScrFI | CCNGG | 3 cut(s) | 1236, 1943, 2745 |
| SduI | GDGCHC | 4 cut(s) | 107, 156, 659, 1955 |
| SfaNI | GCATC | 7 cut(s) | 121, 129, 486, 1306, 1325, 2131, 2366 |
| SfcI | CTRYAG | 1 cut(s) | 2214 |
| Sfr274I | CTCGAG | 1 cut(s) | 2164 |
| SinI | GGWCC | 1 cut(s) | 748 |
| SlaI | CTCGAG | 1 cut(s) | 2164 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 743, 2436 |
| SmlI | CTYRAG | 3 cut(s) | 2164, 2804, 2841 |
| SmoI | CTYRAG | 3 cut(s) | 2164, 2804, 2841 |
| SnaBI | TACGTA | 1 cut(s) | 2256 |
| SpeI | ACTAGT | 2 cut(s) | 1955, 3229 |
| SphI | GCATGC | 1 cut(s) | 1316 |
| SseBI | AGGCCT | 1 cut(s) | 2378 |
| SsiI | CCGC | 3 cut(s) | 1585, 3335, 3822 |
| SspI | AATATT | 3 cut(s) | 310, 521, 3041 |
| SspMI | CTAG | 8 cut(s) | 503, 1956, 2160, 3072, 3230, 3315, 3371, 3672 |
| StuI | AGGCCT | 1 cut(s) | 2378 |
| StyD4I | CCNGG | 3 cut(s) | 1234, 1941, 2743 |
| StyI | CCWWGG | 2 cut(s) | 1381, 3370 |
| TaaI | ACNGT | 8 cut(s) | 316, 511, 661, 1069, 2077, 2629, 2679, 3777 |
| TaiI | ACGT | 5 cut(s) | 1717, 2258, 2875, 3097, 3509 |
| TaqII | GACCGA | 1 cut(s) | 3054 |
| TatI | WGTACW | 6 cut(s) | 37, 1037, 1400, 1736, 2210, 2511 |
| TauI | GCSGC | 1 cut(s) | 3824 |
| TfiI | GAWTC | 9 cut(s) | 947, 1004, 1614, 1759, 2525, 2966, 3345, 3589, 3688 |
| TscAI | CASTG | 5 cut(s) | 614, 818, 1074, 1525, 2676 |
| TseFI | GTSAC | 4 cut(s) | 1873, 2790, 2873, 3448 |
| TseI | GCWGC | 9 cut(s) | 117, 561, 604, 735, 798, 897, 2651, 3002, 3332 |
| Tsp45I | GTSAC | 4 cut(s) | 1873, 2790, 2873, 3448 |
| TspGWI | ACGGA | 7 cut(s) | 860, 916, 974, 1080, 1104, 1689, 2471 |
| TspRI | CASTG | 5 cut(s) | 614, 818, 1074, 1525, 2676 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2276 |
| Vha464I | CTTAAG | 1 cut(s) | 2804 |
| VneI | GTGCAC | 3 cut(s) | 103, 152, 655 |
| VpaK11BI | GGWCC | 1 cut(s) | 748 |
| VspI | ATTAAT | 1 cut(s) | 933 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2820 |
| XapI | RAATTY | 8 cut(s) | 49, 187, 203, 465, 2656, 2734, 3022, 3381 |
| XbaI | TCTAGA | 1 cut(s) | 3071 |
| XceI | RCATGY | 6 cut(s) | 113, 1316, 1731, 2028, 3133, 3719 |
| XhoI | CTCGAG | 1 cut(s) | 2164 |
| XmaJI | CCTAGG | 1 cut(s) | 3370 |
| XmiI | GTMKAC | 2 cut(s) | 2532, 3464 |
| XspI | CTAG | 8 cut(s) | 503, 1956, 2160, 3072, 3230, 3315, 3371, 3672 |
| ZrmI | AGTACT | 3 cut(s) | 1039, 1402, 2212 |
| Zsp2I | ATGCAT | 1 cut(s) | 1318 |