RchiOBHm_Chr3g0450941

beta-galactosidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000071
Physical Location & Seq
Reverse (-)
2258499 .. 2259794
1296 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ41825

Sequence Viewer

Length: 1044 bp
ATGAAGGCATTTGGCTATCGGCAGAGTAATTCTGATCACACTCTCTTTATCAGGCACAAAGCTGGTAAGTTGACAGTGCTCATAGTCTATGTAGATGATATGGTGGTAACCGGAGATGATCCAGTAGAAAGGAAAGCATTACAGGATTATTTGGCTACTGAATTTGAGATGAAAGATCTTGGACAGCTGAAGTATTTCTTGGGGATTGAGGTAGCTAGGTCAAAAGAAGGGATCTCACTATCCCAACGAAAATATGTCCTTGATTTATTGACAGAAACTGGAATGCTTGATTGTCAACCAGTTGAGACACCCATGGAGATGAATCACAGACTAGGTGAATGGAAAGATCAGGTTCCTACAAATAAGTCCAGGTATCAATGTCTTGTTGGTAAATTAATATATTTATCTCATACTAGACCAGATATTGCATACGCAGTTGGTGTCGTTAGTCAGTTTATGCATGCTCCCAGTGAAGACCACATGAATGCAGTTTATCGAATTTTGAGGTATCTAAAGGCTGCTCCAGGGAAAGGATTGTTATTTGCGAAGAAAGACAAGCTGGTAGTTGAGGGGTATACTGATGCAGATTGGGCAGGTTCAAAGGTAGATAGAAGATCTACTTCGGGATACTTTACCTTTGTTGGAGGTAACCTCGTGACATGGCGAAGTAAGAAGCAGAAAGTGGTTGCAAGATCTAGTGCTGAAGCAGAGTTCAGAGGCATGGCACATGGAGTTTGTGAGCTGCTGTGGATTAGACATCTGTTGAAAGATTTGGGCTTCAAGAATAGGAAGACAATGGACTTACATTGCGATAACAAGGCTGCAATTGAAATAGCACATAATCCAGTTCAACATGACCGTACAAAGCATGTGGAAGTAGATCGACACTTCATTAAGGAAAATTTGGACCGGAAAATAATTTGTTTTCCGTTTGTCCAATCAGAAGAGCAGCTAGCAGATATTCTAACCAAAGCAGTTTCAGGAAAAGTATTTAACAGCTCTCTTGACAAGTTGGGCATGATTGATATCTACGCTCCAACTTGA

Protein Analysis

347

Amino Acids

39.5

Weight (kDa)

8.86

Isoelectric Point (pI)

32.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_2 PF07727 3 - 106 1.1e-20 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000071)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G23160 AT4G23160
fragaria_vesca FvH4_2g08111 FvH4_2g17332 FvH4_2g18071 FvH4_2g20531 FvH4_2g20842 FvH4_2g20842 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g24231 FvH4_2g24232 FvH4_3g00831 FvH4_3g00831 FvH4_3g03561 FvH4_3g03561 FvH4_3g10282 FvH4_3g18165 FvH4_3g19021 FvH4_3g24071 FvH4_3g33123 FvH4_3g33970 FvH4_3g38851 FvH4_3g39133 FvH4_3g39271 FvH4_4g00981 FvH4_4g08191 FvH4_4g08311 FvH4_4g08311 FvH4_4g08311 FvH4_4g09341 FvH4_4g12550 FvH4_4g12550 FvH4_4g12550 FvH4_4g13391 FvH4_4g14842 FvH4_4g27901 FvH4_5g11561 FvH4_5g15611 FvH4_5g17991 FvH4_5g27871 FvH4_5g29995 FvH4_5g39662 FvH4_6g02392 FvH4_6g12781 FvH4_6g20106 FvH4_6g20106 FvH4_6g20106 FvH4_6g30872 FvH4_6g34901 FvH4_6g35632 FvH4_6g36661 FvH4_6g43795 FvH4_6g44611 FvH4_7g01791 FvH4_7g04041 FvH4_7g12551 FvH4_7g23351
malus_domestica MD00G1134200.v1.1 MD01G1096500.v1.1 MD01G1128200.v1.1 MD02G1250500.v1.1 MD02G1294900.v1.1 MD03G1121800.v1.1 MD04G1021400.v1.1 MD04G1051100.v1.1 MD04G1051300.v1.1 MD04G1099000.v1.1 MD05G1047900.v1.1 MD05G1298000.v1.1 MD06G1064200.v1.1 MD06G1120600.v1.1 MD07G1013900.v1.1 MD09G1226900.v1.1 MD10G1196700.v1.1 MD10G1307000.v1.1 MD10G1338900.v1.1 MD11G1107300.v1.1 MD11G1138300.v1.1 MD11G1236700.v1.1 MD12G1032500.v1.1 MD12G1150100.v1.1 MD12G1247800.v1.1 MD17G1267900.v1.1
pyrus_communis pycom02g03660 pycom02g13370 pycom02g14840 pycom02g18400 pycom02g18880 pycom02g22740 pycom04g08800 pycom04g15770 pycom05g07980 pycom05g19640 pycom06g09360 pycom07g13160 pycom08g11820 pycom08g21740 pycom09g19980 pycom10g04810 pycom10g05420 pycom10g14650 pycom11g03140 pycom11g21550 pycom12g14740 pycom13g01600 pycom13g29510 pycom14g07060 pycom15g01990 pycom15g19850 pycom15g30860 pycom16g15290 pycom16g16250 pycom16g25390 pycom17g17270 pycom520g00070
rosa_chinensis RchiOBHm_Chr1g0316691 RchiOBHm_Chr1g0320751 RchiOBHm_Chr1g0320771 RchiOBHm_Chr1g0322231 RchiOBHm_Chr1g0322861 RchiOBHm_Chr1g0328471 RchiOBHm_Chr1g0333321 RchiOBHm_Chr1g0337871 RchiOBHm_Chr1g0339051 RchiOBHm_Chr1g0349861 RchiOBHm_Chr1g0361951 RchiOBHm_Chr1g0365931 RchiOBHm_Chr1g0365981 RchiOBHm_Chr1g0377711 RchiOBHm_Chr1g0381581 RchiOBHm_Chr1g0382741 RchiOBHm_Chr1g0383501 RchiOBHm_Chr2g0101201 RchiOBHm_Chr2g0113601 RchiOBHm_Chr2g0124031 RchiOBHm_Chr2g0135481 RchiOBHm_Chr2g0148361 RchiOBHm_Chr2g0150101 RchiOBHm_Chr2g0154181 RchiOBHm_Chr2g0156071 RchiOBHm_Chr2g0166521 RchiOBHm_Chr2g0166821 RchiOBHm_Chr3g0448011 RchiOBHm_Chr3g0450941 RchiOBHm_Chr3g0450961 RchiOBHm_Chr3g0451051 RchiOBHm_Chr3g0451721 RchiOBHm_Chr3g0453371 RchiOBHm_Chr3g0454881 RchiOBHm_Chr3g0457421 RchiOBHm_Chr3g0457661 RchiOBHm_Chr3g0460011 RchiOBHm_Chr3g0461531 RchiOBHm_Chr3g0461981 RchiOBHm_Chr3g0463471 RchiOBHm_Chr3g0466641 RchiOBHm_Chr3g0468181 RchiOBHm_Chr3g0483351 RchiOBHm_Chr4g0394001 RchiOBHm_Chr4g0397261 RchiOBHm_Chr4g0404531 RchiOBHm_Chr4g0410841 RchiOBHm_Chr4g0415501 RchiOBHm_Chr4g0425221 RchiOBHm_Chr4g0430811 RchiOBHm_Chr5g0010831 RchiOBHm_Chr5g0016831 RchiOBHm_Chr5g0016851 RchiOBHm_Chr5g0031351 RchiOBHm_Chr5g0032151 RchiOBHm_Chr5g0041201 RchiOBHm_Chr5g0042191 RchiOBHm_Chr5g0064121 RchiOBHm_Chr5g0066601 RchiOBHm_Chr5g0078371 RchiOBHm_Chr5g0079271 RchiOBHm_Chr6g0263751 RchiOBHm_Chr6g0285111 RchiOBHm_Chr6g0298961 RchiOBHm_Chr6g0300481 RchiOBHm_Chr6g0303211 RchiOBHm_Chr7g0192341 RchiOBHm_Chr7g0196171 RchiOBHm_Chr7g0200281 RchiOBHm_Chr7g0200551 RchiOBHm_Chr7g0207611 RchiOBHm_Chr7g0212421 RchiOBHm_Chr7g0214991 RchiOBHm_Chr7g0219211 RchiOBHm_Chr7g0242371
rosa_laevigata RLG00000002389 RLG00000007980
rosa_roxburghii Rroxscaffold_1G00053480 Rroxscaffold_2G00090890 Rroxscaffold_2G00099660 Rroxscaffold_2G00134510 Rroxscaffold_3G00221450 Rroxscaffold_3G00240550 Rroxscaffold_4G00305710 Rroxscaffold_4G00306360 Rroxscaffold_4G00306800 Rroxscaffold_4G00329090 Rroxscaffold_5G00382750 Rroxscaffold_5G00385900 Rroxscaffold_6G00403080 Rroxscaffold_7G00172890 Rroxscaffold_7G00186690
rosa_samantha Rh1DG425600
rosa_wichuraiana Rw0G001640 Rw0G009160 Rw0G010480 Rw0G010520 Rw0G013850 Rw0G017170 Rw0G018520 Rw0G019280 Rw0G022780 Rw1G000360 Rw1G001410 Rw1G001630 Rw1G002100 Rw1G006810 Rw1G010680 Rw1G012700 Rw1G016160 Rw1G022180 Rw1G023580 Rw1G025640 Rw1G026310 Rw1G027230 Rw1G028110 Rw1G034180 Rw2G004990 Rw2G005840 Rw2G007350 Rw2G024730 Rw2G025580 Rw2G026670 Rw2G027210 Rw2G029060 Rw2G031560 Rw2G042190 Rw2G043850 Rw2G045990 Rw2G046130 Rw2G049290 Rw2G049310 Rw2G049790 Rw2G052250 Rw3G004350 Rw3G013100 Rw3G015280 Rw3G015720 Rw3G024630 Rw3G026470 Rw3G027840 Rw3G028960 Rw3G029130 Rw3G029160 Rw4G000280 Rw4G006650 Rw4G008970 Rw4G009310 Rw4G011730 Rw4G012000 Rw4G012610 Rw4G014300 Rw4G014690 Rw4G015190 Rw4G016470 Rw4G020750 Rw4G025060 Rw4G025080 Rw5G005610 Rw5G010380 Rw5G013970 Rw5G015130 Rw5G015250 Rw5G017640 Rw5G019910 Rw5G022410 Rw5G023550 Rw5G029710 Rw5G037650 Rw5G038280 Rw5G038570 Rw5G041550 Rw5G042600 Rw5G043910 Rw5G047850 Rw5G048200 Rw5G049920 Rw6G000260 Rw6G000530 Rw6G001710 Rw6G005090 Rw6G006730 Rw6G009310 Rw6G010950 Rw6G011630 Rw6G012080 Rw6G012750 Rw6G015970 Rw6G020700 Rw6G024350 Rw7G008540 Rw7G016620 Rw7G019400 Rw7G020010 Rw7G024240 Rw7G025630 Rw7G027550 Rw7G027770 Rw7G027960 Rw7G028450 Rw7G031280 Rw7G031970 Rw7G032180 Rw7G033590 Rw7G033720 Rw7G033890 Rw7G041800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 584
AccI GTMKAC 1 cut(s) 575
AclWI GGATC 2 cut(s) 113, 239
AcsI RAATTY 3 cut(s) 161, 498, 901
AcuI CTGAAG 2 cut(s) 209, 723
AfaI GTAC 1 cut(s) 862
AfiI CCNNNNNNNGG 1 cut(s) 530
AgsI TTSAA 5 cut(s) 600, 766, 781, 830, 851
AjnI CCWGG 2 cut(s) 368, 523
AjuI GAANNNNNNNTTGG 2 cut(s) 182, 214
AluBI AGCT 7 cut(s) 62, 187, 215, 559, 742, 952, 999
AluI AGCT 7 cut(s) 62, 187, 215, 559, 742, 952, 999
Alw21I GWGCWC 1 cut(s) 81
Alw26I GTCTC 1 cut(s) 299
AlwI GGATC 2 cut(s) 113, 239
AlwNI CAGNNNCTG 1 cut(s) 278
ApeKI GCWGC 4 cut(s) 518, 742, 821, 949
ApoI RAATTY 3 cut(s) 161, 498, 901
AseI ATTAAT 1 cut(s) 395
Asp700I GAANNNNTTC 1 cut(s) 194
AspS9I GGNCC 1 cut(s) 907
AsuHPI GGTGA 1 cut(s) 347
AsuNHI GCTAGC 1 cut(s) 952
AvaII GGWCC 1 cut(s) 907
BauI CACGAG 1 cut(s) 653
BbsI GAAGAC 2 cut(s) 480, 797
Bbv12I GWGCWC 1 cut(s) 81
BbvI GCAGC 4 cut(s) 505, 729, 808, 961
BciT130I CCWGG 2 cut(s) 370, 525
BciVI GTATCC 1 cut(s) 620
BclI TGATCA 1 cut(s) 34
BcoDI GTCTC 1 cut(s) 299
BfaI CTAG 5 cut(s) 216, 332, 414, 696, 953
BfuAI ACCTGC 1 cut(s) 584
BfuI GTATCC 1 cut(s) 620
BglII AGATCT 3 cut(s) 175, 614, 692
BisI GCNGC 4 cut(s) 519, 743, 822, 950
BlsI GCNGC 4 cut(s) 520, 744, 823, 951
Bme1390I CCNGG 2 cut(s) 370, 525
Bme18I GGWCC 1 cut(s) 907
BmgT120I GGNCC 1 cut(s) 907
BmiI GGNNCC 1 cut(s) 354
BmrFI CCNGG 2 cut(s) 370, 525
BmrI ACTGGG 1 cut(s) 462
BmsI GCATC 1 cut(s) 571
BmtI GCTAGC 1 cut(s) 956
BmuI ACTGGG 1 cut(s) 462
BpiI GAAGAC 2 cut(s) 480, 797
BplI GAGNNNNNCTC 2 cut(s) 636, 668
BpmI CTGGAG 1 cut(s) 507
BsaBI GATNNNNATC 1 cut(s) 1025
BsaJI CCNNGG 2 cut(s) 312, 524
BsaWI WCCGGW 2 cut(s) 110, 909
Bsc4I CCNNNNNNNGG 1 cut(s) 530
Bse1I ACTGG 5 cut(s) 122, 283, 299, 468, 845
Bse3DI GCAATG 1 cut(s) 805
Bse8I GATNNNNATC 1 cut(s) 1025
BseBI CCWGG 2 cut(s) 370, 525
BseDI CCNNGG 2 cut(s) 312, 524
BseJI GATNNNNATC 1 cut(s) 1025
BseLI CCNNNNNNNGG 1 cut(s) 530
BseMI GCAATG 1 cut(s) 805
BseNI ACTGG 5 cut(s) 122, 283, 299, 468, 845
BseXI GCAGC 4 cut(s) 505, 729, 808, 961
BsiHKAI GWGCWC 1 cut(s) 81
BsiSI CCGG 2 cut(s) 111, 910
BslI CCNNNNNNNGG 1 cut(s) 530
BsmAI GTCTC 1 cut(s) 299
BsmI GAATGC 2 cut(s) 288, 490
Bsp1286I GDGCHC 1 cut(s) 81
Bsp143I GATC 8 cut(s) 34, 118, 175, 231, 346, 614, 692, 880
Bsp19I CCATGG 1 cut(s) 312
BspLI GGNNCC 1 cut(s) 354
BspMI ACCTGC 1 cut(s) 584
BspOI GCTAGC 1 cut(s) 956
BspPI GGATC 2 cut(s) 113, 239
BspQI GCTCTTC 1 cut(s) 939
BsrDI GCAATG 1 cut(s) 805
BsrI ACTGG 5 cut(s) 122, 283, 299, 468, 845
BssECI CCNNGG 2 cut(s) 312, 524
BssMI GATC 8 cut(s) 34, 118, 175, 231, 346, 614, 692, 880
BssNAI GTATAC 1 cut(s) 576
BssSI CACGAG 1 cut(s) 653
BssT1I CCWWGG 1 cut(s) 312
Bst1107I GTATAC 1 cut(s) 576
Bst2BI CACGAG 1 cut(s) 653
Bst2UI CCWGG 2 cut(s) 370, 525
Bst4CI ACNGT 2 cut(s) 76, 860
Bst6I CTCTTC 1 cut(s) 939
BstC8I GCNNGC 2 cut(s) 462, 954
BstDSI CCRYGG 1 cut(s) 312
BstEII GGTNACC 2 cut(s) 106, 647
BstKTI GATC 8 cut(s) 37, 121, 178, 234, 349, 617, 695, 883
BstMAI GTCTC 1 cut(s) 299
BstMBI GATC 8 cut(s) 34, 118, 175, 231, 346, 614, 692, 880
BstMWI GCNNNNNNNGC 1 cut(s) 590
BstNI CCWGG 2 cut(s) 370, 525
BstNSI RCATGY 2 cut(s) 464, 872
BstPI GGTNACC 2 cut(s) 106, 647
BstSCI CCNGG 2 cut(s) 368, 523
BstV1I GCAGC 4 cut(s) 505, 729, 808, 961
BstV2I GAAGAC 2 cut(s) 480, 797
BstX2I RGATCY 4 cut(s) 175, 231, 614, 692
BstYI RGATCY 4 cut(s) 175, 231, 614, 692
BstZ17I GTATAC 1 cut(s) 576
BsuI GTATCC 1 cut(s) 620
BtgI CCRYGG 1 cut(s) 312
BtsIMutI CAGTG 2 cut(s) 81, 475
BveI ACCTGC 1 cut(s) 584
Cac8I GCNNGC 2 cut(s) 462, 954
CaiI CAGNNNCTG 1 cut(s) 278
Cfr13I GGNCC 1 cut(s) 907
Csp6I GTAC 1 cut(s) 861
CspCI CAANNNNNGTGG 2 cut(s) 852, 887
CviAII CATG 9 cut(s) 313, 461, 481, 660, 721, 728, 854, 869, 1018
CviQI GTAC 1 cut(s) 861
DpnI GATC 8 cut(s) 36, 120, 177, 233, 348, 616, 694, 882
DpnII GATC 8 cut(s) 34, 118, 175, 231, 346, 614, 692, 880
Eam1104I CTCTTC 1 cut(s) 939
EarI CTCTTC 1 cut(s) 939
Eco130I CCWWGG 1 cut(s) 312
Eco32I GATATC 1 cut(s) 1027
Eco47I GGWCC 1 cut(s) 907
Eco57I CTGAAG 2 cut(s) 209, 723
Eco91I GGTNACC 2 cut(s) 106, 647
EcoO65I GGTNACC 2 cut(s) 106, 647
EcoRII CCWGG 2 cut(s) 368, 523
EcoRV GATATC 1 cut(s) 1027
EcoT14I CCWWGG 1 cut(s) 312
EcoT22I ATGCAT 1 cut(s) 462
ErhI CCWWGG 1 cut(s) 312
FaeI CATG 9 cut(s) 316, 464, 484, 663, 724, 731, 857, 872, 1021
FalI AAGNNNNNCTT 4 cut(s) 182, 214, 604, 636
FatI CATG 9 cut(s) 312, 460, 480, 659, 720, 727, 853, 868, 1017
FbaI TGATCA 1 cut(s) 34
FblI GTMKAC 1 cut(s) 575
Fnu4HI GCNGC 4 cut(s) 519, 743, 822, 950
Fsp4HI GCNGC 4 cut(s) 519, 743, 822, 950
FspBI CTAG 5 cut(s) 216, 332, 414, 696, 953
GluI GCNGC 4 cut(s) 519, 743, 822, 950
GsuI CTGGAG 1 cut(s) 507
HapII CCGG 2 cut(s) 111, 910
Hin1II CATG 9 cut(s) 316, 464, 484, 663, 724, 731, 857, 872, 1021
HincII GTYRAC 2 cut(s) 72, 296
HindII GTYRAC 2 cut(s) 72, 296
HinfI GANTC 1 cut(s) 322
HpaII CCGG 2 cut(s) 111, 910
HphI GGTGA 1 cut(s) 347
Hpy166II GTNNAC 3 cut(s) 72, 296, 576
Hpy188I TCNGA 3 cut(s) 34, 716, 943
Hpy188III TCNNGA 5 cut(s) 624, 655, 781, 981, 1004
Hpy8I GTNNAC 3 cut(s) 72, 296, 576
HpyAV CCTTC 1 cut(s) 221
HpyCH4III ACNGT 2 cut(s) 76, 860
HpyCH4V TGCA 6 cut(s) 428, 460, 488, 584, 689, 824
HpyF10VI GCNNNNNNNGC 1 cut(s) 590
Hsp92II CATG 9 cut(s) 316, 464, 484, 663, 724, 731, 857, 872, 1021
Ksp22I TGATCA 1 cut(s) 34
Kzo9I GATC 8 cut(s) 34, 118, 175, 231, 346, 614, 692, 880
LguI GCTCTTC 1 cut(s) 939
LmnI GCTCC 3 cut(s) 469, 526, 1039
Lsp1109I GCAGC 4 cut(s) 505, 729, 808, 961
LweI GCATC 1 cut(s) 571
MaeI CTAG 5 cut(s) 216, 332, 414, 696, 953
MaeIII GTNAC 3 cut(s) 106, 647, 655
MalI GATC 8 cut(s) 36, 120, 177, 233, 348, 616, 694, 882
MboI GATC 8 cut(s) 34, 118, 175, 231, 346, 614, 692, 880
MboII GAAGA 5 cut(s) 485, 559, 624, 802, 956
MfeI CAATTG 1 cut(s) 825
MflI RGATCY 4 cut(s) 175, 231, 614, 692
MhlI GDGCHC 1 cut(s) 81
MluCI AATT 7 cut(s) 28, 161, 392, 498, 825, 901, 918
MmeI TCCRAC 1 cut(s) 622
MnlI CCTC 6 cut(s) 202, 498, 562, 638, 662, 710
Mph1103I ATGCAT 1 cut(s) 462
MroXI GAANNNNTTC 1 cut(s) 194
MseI TTAA 3 cut(s) 395, 894, 993
MslI CAYNNNNRTG 2 cut(s) 317, 483
MspA1I CMGCKG 1 cut(s) 187
MspI CCGG 2 cut(s) 111, 910
MspR9I CCNGG 2 cut(s) 370, 525
MunI CAATTG 1 cut(s) 825
Mva1269I GAATGC 2 cut(s) 288, 490
MvaI CCWGG 2 cut(s) 370, 525
MwoI GCNNNNNNNGC 1 cut(s) 590
NcoI CCATGG 1 cut(s) 312
NdeII GATC 8 cut(s) 34, 118, 175, 231, 346, 614, 692, 880
NheI GCTAGC 1 cut(s) 952
NlaIII CATG 9 cut(s) 316, 464, 484, 663, 724, 731, 857, 872, 1021
NlaIV GGNNCC 1 cut(s) 354
NmuCI GTSAC 1 cut(s) 655
NsiI ATGCAT 1 cut(s) 462
NspI RCATGY 2 cut(s) 464, 872
PaeI GCATGC 1 cut(s) 464
PciSI GCTCTTC 1 cut(s) 939
PctI GAATGC 2 cut(s) 288, 490
PdmI GAANNNNTTC 1 cut(s) 194
PfeI GAWTC 1 cut(s) 322
PkrI GCNGC 4 cut(s) 520, 744, 823, 951
PshBI ATTAAT 1 cut(s) 395
Psp6I CCWGG 2 cut(s) 368, 523
PspEI GGTNACC 2 cut(s) 106, 647
PspGI CCWGG 2 cut(s) 368, 523
PspN4I GGNNCC 1 cut(s) 354
PspPI GGNCC 1 cut(s) 907
PstNI CAGNNNCTG 1 cut(s) 278
PsuI RGATCY 4 cut(s) 175, 231, 614, 692
PvuII CAGCTG 1 cut(s) 187
RsaI GTAC 1 cut(s) 862
RsaNI GTAC 1 cut(s) 861
RseI CAYNNNNRTG 2 cut(s) 317, 483
SapI GCTCTTC 1 cut(s) 939
SaqAI TTAA 3 cut(s) 395, 894, 993
SatI GCNGC 4 cut(s) 519, 743, 822, 950
Sau3AI GATC 8 cut(s) 34, 118, 175, 231, 346, 614, 692, 880
Sau96I GGNCC 1 cut(s) 907
ScrFI CCNGG 2 cut(s) 370, 525
SduI GDGCHC 1 cut(s) 81
SfaNI GCATC 1 cut(s) 571
SinI GGWCC 1 cut(s) 907
SmiMI CAYNNNNRTG 2 cut(s) 317, 483
SphI GCATGC 1 cut(s) 464
Sse9I AATT 7 cut(s) 28, 161, 392, 498, 825, 901, 918
SspMI CTAG 5 cut(s) 216, 332, 414, 696, 953
StyD4I CCNGG 2 cut(s) 368, 523
StyI CCWWGG 1 cut(s) 312
TaaI ACNGT 2 cut(s) 76, 860
TaqI TCGA 2 cut(s) 496, 883
TasI AATT 7 cut(s) 28, 161, 392, 498, 825, 901, 918
TfiI GAWTC 1 cut(s) 322
Tru1I TTAA 3 cut(s) 395, 894, 993
Tru9I TTAA 3 cut(s) 395, 894, 993
TscAI CASTG 2 cut(s) 81, 475
TseFI GTSAC 1 cut(s) 655
TseI GCWGC 4 cut(s) 518, 742, 821, 949
Tsp45I GTSAC 1 cut(s) 655
TspDTI ATGAA 5 cut(s) 17, 185, 335, 497, 880
TspGWI ACGGA 1 cut(s) 918
TspRI CASTG 2 cut(s) 81, 475
VpaK11BI GGWCC 1 cut(s) 907
VspI ATTAAT 1 cut(s) 395
XapI RAATTY 3 cut(s) 161, 498, 901
XceI RCATGY 2 cut(s) 464, 872
XmiI GTMKAC 1 cut(s) 575
XmnI GAANNNNTTC 1 cut(s) 194
XspI CTAG 5 cut(s) 216, 332, 414, 696, 953
Zsp2I ATGCAT 1 cut(s) 462
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.