Reverse transcriptase (RNA-dependent DNA polymerase)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_2 | PF07727 | 1 - 73 | 1.3e-14 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 208, 485 |
| AccI | GTMKAC | 1 cut(s) | 196 |
| AclWI | GGATC | 1 cut(s) | 388 |
| AcoI | YGGCCR | 2 cut(s) | 317, 541 |
| AcsI | RAATTY | 1 cut(s) | 132 |
| AfaI | GTAC | 1 cut(s) | 242 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 431 |
| AgsI | TTSAA | 2 cut(s) | 35, 447 |
| AjnI | CCWGG | 3 cut(s) | 116, 424, 543 |
| AluBI | AGCT | 1 cut(s) | 389 |
| AluI | AGCT | 1 cut(s) | 389 |
| Alw26I | GTCTC | 1 cut(s) | 170 |
| AlwI | GGATC | 1 cut(s) | 388 |
| AoxI | GGCC | 2 cut(s) | 317, 541 |
| ApoI | RAATTY | 1 cut(s) | 132 |
| AseI | ATTAAT | 1 cut(s) | 296 |
| AsuHPI | GGTGA | 1 cut(s) | 26 |
| BalI | TGGCCA | 1 cut(s) | 543 |
| BciT130I | CCWGG | 3 cut(s) | 118, 426, 545 |
| BcoDI | GTCTC | 1 cut(s) | 170 |
| BfaI | CTAG | 1 cut(s) | 188 |
| BfuAI | ACCTGC | 2 cut(s) | 208, 485 |
| BglII | AGATCT | 2 cut(s) | 46, 76 |
| Bme1390I | CCNGG | 3 cut(s) | 118, 426, 545 |
| BmrFI | CCNGG | 3 cut(s) | 118, 426, 545 |
| BmrI | ACTGGG | 1 cut(s) | 499 |
| BmsI | GCATC | 2 cut(s) | 65, 472 |
| BmuI | ACTGGG | 1 cut(s) | 499 |
| BsaJI | CCNNGG | 1 cut(s) | 117 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 431 |
| Bse1I | ACTGG | 3 cut(s) | 16, 237, 494 |
| Bse3DI | GCAATG | 1 cut(s) | 324 |
| BseBI | CCWGG | 3 cut(s) | 118, 426, 545 |
| BseDI | CCNNGG | 1 cut(s) | 117 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 431 |
| BseMI | GCAATG | 1 cut(s) | 324 |
| BseMII | CTCAG | 2 cut(s) | 228, 395 |
| BseNI | ACTGG | 3 cut(s) | 16, 237, 494 |
| BseRI | GAGGAG | 1 cut(s) | 41 |
| BsgI | GTGCAG | 1 cut(s) | 405 |
| BshFI | GGCC | 2 cut(s) | 319, 543 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 431 |
| BsmAI | GTCTC | 1 cut(s) | 170 |
| BsmI | GAATGC | 1 cut(s) | 189 |
| BsnI | GGCC | 2 cut(s) | 319, 543 |
| Bsp143I | GATC | 3 cut(s) | 46, 76, 393 |
| BspANI | GGCC | 2 cut(s) | 319, 543 |
| BspCNI | CTCAG | 2 cut(s) | 229, 396 |
| BspMI | ACCTGC | 2 cut(s) | 208, 485 |
| BspPI | GGATC | 1 cut(s) | 388 |
| BsrDI | GCAATG | 1 cut(s) | 324 |
| BsrI | ACTGG | 3 cut(s) | 16, 237, 494 |
| BssECI | CCNNGG | 1 cut(s) | 117 |
| BssMI | GATC | 3 cut(s) | 46, 76, 393 |
| Bst2UI | CCWGG | 3 cut(s) | 118, 426, 545 |
| BstC8I | GCNNGC | 2 cut(s) | 54, 271 |
| BstDEI | CTNAG | 2 cut(s) | 237, 404 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 429 |
| BstKTI | GATC | 3 cut(s) | 49, 79, 396 |
| BstMAI | GTCTC | 1 cut(s) | 170 |
| BstMBI | GATC | 3 cut(s) | 46, 76, 393 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 491 |
| BstNI | CCWGG | 3 cut(s) | 118, 426, 545 |
| BstSCI | CCNGG | 3 cut(s) | 116, 424, 543 |
| BstX2I | RGATCY | 2 cut(s) | 46, 76 |
| BstYI | RGATCY | 2 cut(s) | 46, 76 |
| BsuRI | GGCC | 2 cut(s) | 319, 543 |
| BveI | ACCTGC | 2 cut(s) | 208, 485 |
| Cac8I | GCNNGC | 2 cut(s) | 54, 271 |
| Csp6I | GTAC | 1 cut(s) | 241 |
| CviAII | CATG | 1 cut(s) | 358 |
| CviJI | RGCY | 5 cut(s) | 236, 269, 319, 389, 543 |
| CviKI_1 | RGCY | 5 cut(s) | 236, 269, 319, 389, 543 |
| CviQI | GTAC | 1 cut(s) | 241 |
| DdeI | CTNAG | 2 cut(s) | 237, 404 |
| DpnI | GATC | 3 cut(s) | 48, 78, 395 |
| DpnII | GATC | 3 cut(s) | 46, 76, 393 |
| DraI | TTTAAA | 1 cut(s) | 414 |
| EaeI | YGGCCR | 2 cut(s) | 317, 541 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 429 |
| EcoRII | CCWGG | 3 cut(s) | 116, 424, 543 |
| EcoT22I | ATGCAT | 1 cut(s) | 363 |
| FaeI | CATG | 1 cut(s) | 361 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 36, 68 |
| FatI | CATG | 1 cut(s) | 357 |
| FauNDI | CATATG | 2 cut(s) | 331, 381 |
| FblI | GTMKAC | 1 cut(s) | 196 |
| FspBI | CTAG | 1 cut(s) | 188 |
| HaeIII | GGCC | 2 cut(s) | 319, 543 |
| Hin1II | CATG | 1 cut(s) | 361 |
| HincII | GTYRAC | 1 cut(s) | 171 |
| HindII | GTYRAC | 1 cut(s) | 171 |
| HinfI | GANTC | 1 cut(s) | 349 |
| HphI | GGTGA | 1 cut(s) | 26 |
| Hpy166II | GTNNAC | 2 cut(s) | 171, 197 |
| Hpy188I | TCNGA | 5 cut(s) | 25, 61, 279, 405, 526 |
| Hpy188III | TCNNGA | 2 cut(s) | 129, 461 |
| Hpy8I | GTNNAC | 2 cut(s) | 171, 197 |
| HpyAV | CCTTC | 1 cut(s) | 259 |
| HpyCH4V | TGCA | 6 cut(s) | 56, 329, 335, 361, 422, 485 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 491 |
| HpyF3I | CTNAG | 2 cut(s) | 237, 404 |
| Hsp92II | CATG | 1 cut(s) | 361 |
| Kzo9I | GATC | 3 cut(s) | 46, 76, 393 |
| LweI | GCATC | 2 cut(s) | 65, 472 |
| MaeI | CTAG | 1 cut(s) | 188 |
| MaeIII | GTNAC | 1 cut(s) | 502 |
| MalI | GATC | 3 cut(s) | 48, 78, 395 |
| MboI | GATC | 3 cut(s) | 46, 76, 393 |
| MflI | RGATCY | 2 cut(s) | 46, 76 |
| MlsI | TGGCCA | 1 cut(s) | 543 |
| MluCI | AATT | 4 cut(s) | 6, 19, 132, 353 |
| MluNI | TGGCCA | 1 cut(s) | 543 |
| MlyI | GAGTC | 1 cut(s) | 358 |
| MnlI | CCTC | 5 cut(s) | 19, 22, 103, 273, 399 |
| Mox20I | TGGCCA | 1 cut(s) | 543 |
| Mph1103I | ATGCAT | 1 cut(s) | 363 |
| MscI | TGGCCA | 1 cut(s) | 543 |
| MseI | TTAA | 4 cut(s) | 41, 90, 296, 413 |
| Msp20I | TGGCCA | 1 cut(s) | 543 |
| MspR9I | CCNGG | 3 cut(s) | 118, 426, 545 |
| Mva1269I | GAATGC | 1 cut(s) | 189 |
| MvaI | CCWGG | 3 cut(s) | 118, 426, 545 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 491 |
| NdeI | CATATG | 2 cut(s) | 331, 381 |
| NdeII | GATC | 3 cut(s) | 46, 76, 393 |
| NlaIII | CATG | 1 cut(s) | 361 |
| NmeAIII | GCCGAG | 1 cut(s) | 295 |
| NsiI | ATGCAT | 1 cut(s) | 363 |
| PctI | GAATGC | 1 cut(s) | 189 |
| PleI | GAGTC | 1 cut(s) | 357 |
| PpsI | GAGTC | 1 cut(s) | 357 |
| PshBI | ATTAAT | 1 cut(s) | 296 |
| Psp6I | CCWGG | 3 cut(s) | 116, 424, 543 |
| PspGI | CCWGG | 3 cut(s) | 116, 424, 543 |
| PsuI | RGATCY | 2 cut(s) | 46, 76 |
| RsaI | GTAC | 1 cut(s) | 242 |
| RsaNI | GTAC | 1 cut(s) | 241 |
| SaqAI | TTAA | 4 cut(s) | 41, 90, 296, 413 |
| Sau3AI | GATC | 3 cut(s) | 46, 76, 393 |
| SchI | GAGTC | 1 cut(s) | 358 |
| ScrFI | CCNGG | 3 cut(s) | 118, 426, 545 |
| SfaNI | GCATC | 2 cut(s) | 65, 472 |
| Sse9I | AATT | 4 cut(s) | 6, 19, 132, 353 |
| SspI | AATATT | 1 cut(s) | 95 |
| SspMI | CTAG | 1 cut(s) | 188 |
| StyD4I | CCNGG | 3 cut(s) | 116, 424, 543 |
| TasI | AATT | 4 cut(s) | 6, 19, 132, 353 |
| Tru1I | TTAA | 4 cut(s) | 41, 90, 296, 413 |
| Tru9I | TTAA | 4 cut(s) | 41, 90, 296, 413 |
| TspDTI | ATGAA | 2 cut(s) | 86, 346 |
| TspGWI | ACGGA | 2 cut(s) | 386, 521 |
| VspI | ATTAAT | 1 cut(s) | 296 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 429 |
| XapI | RAATTY | 1 cut(s) | 132 |
| XmiI | GTMKAC | 1 cut(s) | 196 |
| XspI | CTAG | 1 cut(s) | 188 |
| Zsp2I | ATGCAT | 1 cut(s) | 363 |