FvH4_7g23351

Reverse transcriptase (RNA-dependent DNA polymerase)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000071
Physical Location & Seq
Reverse (-)
18248913 .. 18250073
1161 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g23351.t1

Sequence Viewer

Length: 1161 bp
ATGCTTCCTCCACCTGGTTACTGTCGACAGGGGGAGAATGAAGTTTGTCGACTCCACAAGTCGCTTTACGGACTTAAACAAGCGTCCCGTAGCTGGTTTCAACGTTTCTCTTCAGCTATCCAAGAAATTGGTTTTCAACAATCCCGAGCTGATTATTCTTTATTCACACAGGTTCGTGGAGATTTCATCACTGTGGTGTTGTTGTATGTTGATGATATGGTCATAACAGGGAACAATGAGAAGGCTATCAATGATCTCAAAGTCTTCCTCAACAGCTGTTTTAAAATCAAAGATCTTGGACCTCTCAAATACTTCCTTGGCATTGAGGTGGCACGATCAAAGGCTGGAATCTCTGTTTGTCAGCGAAAGTACACTTTAGATATCTTGGAGGAAGTTGGCTTACTTGGAGTAAAACCTGCAAAAGTGCCTATGGAACCGGATTTGGTACTGACAGAAAAAGGGAGTGATAGCCTCAAAGATCCTACTCGATATCGACGGTTGATTGGGAAATTAATTTATCTCACAATCACTCGGCCGGATATCACATACTCTGTGAACACTCTTAGCCAATTTATGCAAGACCCCAAGCTACATCATTTCAAGGCAGCCCTTCGACTTCTTCAATACTTGAAAACAGCTCCAGGACAAGGTCTATTATTTCCTTCAAACAGCCAATTGCATTTGATTGGATATTGTGATGCTGATTGGGCAAGGTGTCCTGTTACACGCCGGTCAGTTACCGGGTATTGTATTTTCCTTGGTGGATCACTTGTGTCATGGAAAAGTAAAAAACAAGTCACGGTGTCAAGGTCCTCTGCTGAGGCTGAATATCGTTCAATGGCCTCAGTTACATGTGAACTAACTTGGCTGAGGTACCTGTTGAAGGATTTGTGTGTACCTCATTCGGCACCAGCAAGGCTGTTTTGTGACAACCAAGCGGCTCTGCATATCACTGCAAACCCGGTTTATCATGAGCGAATGAAGCATATAGAACTTGATTGTCATACAGTTCGTGAGAGGATTAAAAAAGGTGAAATCAGAACAGCATATGTGCAAACTGGAGAACAGATTGCAGACTTATTCACAAAGCCCTTGCGAGCACCAATTTTTCACATGCATCTTAGCAAGTTGGGTGTTATTGACATACACACTCCAACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2 Retrotran_gag_3 Retrotrans_gag

Protein Analysis

387

Amino Acids

43.8

Weight (kDa)

9.28

Isoelectric Point (pI)

35.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_2 PF07727 1 - 145 2.8e-37 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000071)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G23160 AT4G23160
fragaria_vesca FvH4_2g08111 FvH4_2g17332 FvH4_2g18071 FvH4_2g20531 FvH4_2g20842 FvH4_2g20842 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g24231 FvH4_2g24232 FvH4_3g00831 FvH4_3g00831 FvH4_3g03561 FvH4_3g03561 FvH4_3g10282 FvH4_3g18165 FvH4_3g19021 FvH4_3g24071 FvH4_3g33123 FvH4_3g33970 FvH4_3g38851 FvH4_3g39133 FvH4_3g39271 FvH4_4g00981 FvH4_4g08191 FvH4_4g08311 FvH4_4g08311 FvH4_4g08311 FvH4_4g09341 FvH4_4g12550 FvH4_4g12550 FvH4_4g12550 FvH4_4g13391 FvH4_4g14842 FvH4_4g27901 FvH4_5g11561 FvH4_5g15611 FvH4_5g17991 FvH4_5g27871 FvH4_5g29995 FvH4_5g39662 FvH4_6g02392 FvH4_6g12781 FvH4_6g20106 FvH4_6g20106 FvH4_6g20106 FvH4_6g30872 FvH4_6g34901 FvH4_6g35632 FvH4_6g36661 FvH4_6g43795 FvH4_6g44611 FvH4_7g01791 FvH4_7g04041 FvH4_7g12551 FvH4_7g23351
malus_domestica MD00G1134200.v1.1 MD01G1096500.v1.1 MD01G1128200.v1.1 MD02G1250500.v1.1 MD02G1294900.v1.1 MD03G1121800.v1.1 MD04G1021400.v1.1 MD04G1051100.v1.1 MD04G1051300.v1.1 MD04G1099000.v1.1 MD05G1047900.v1.1 MD05G1298000.v1.1 MD06G1064200.v1.1 MD06G1120600.v1.1 MD07G1013900.v1.1 MD09G1226900.v1.1 MD10G1196700.v1.1 MD10G1307000.v1.1 MD10G1338900.v1.1 MD11G1107300.v1.1 MD11G1138300.v1.1 MD11G1236700.v1.1 MD12G1032500.v1.1 MD12G1150100.v1.1 MD12G1247800.v1.1 MD17G1267900.v1.1
pyrus_communis pycom02g03660 pycom02g13370 pycom02g14840 pycom02g18400 pycom02g18880 pycom02g22740 pycom04g08800 pycom04g15770 pycom05g07980 pycom05g19640 pycom06g09360 pycom07g13160 pycom08g11820 pycom08g21740 pycom09g19980 pycom10g04810 pycom10g05420 pycom10g14650 pycom11g03140 pycom11g21550 pycom12g14740 pycom13g01600 pycom13g29510 pycom14g07060 pycom15g01990 pycom15g19850 pycom15g30860 pycom16g15290 pycom16g16250 pycom16g25390 pycom17g17270 pycom520g00070
rosa_chinensis RchiOBHm_Chr1g0316691 RchiOBHm_Chr1g0320751 RchiOBHm_Chr1g0320771 RchiOBHm_Chr1g0322231 RchiOBHm_Chr1g0322861 RchiOBHm_Chr1g0328471 RchiOBHm_Chr1g0333321 RchiOBHm_Chr1g0337871 RchiOBHm_Chr1g0339051 RchiOBHm_Chr1g0349861 RchiOBHm_Chr1g0361951 RchiOBHm_Chr1g0365931 RchiOBHm_Chr1g0365981 RchiOBHm_Chr1g0377711 RchiOBHm_Chr1g0381581 RchiOBHm_Chr1g0382741 RchiOBHm_Chr1g0383501 RchiOBHm_Chr2g0101201 RchiOBHm_Chr2g0113601 RchiOBHm_Chr2g0124031 RchiOBHm_Chr2g0135481 RchiOBHm_Chr2g0148361 RchiOBHm_Chr2g0150101 RchiOBHm_Chr2g0154181 RchiOBHm_Chr2g0156071 RchiOBHm_Chr2g0166521 RchiOBHm_Chr2g0166821 RchiOBHm_Chr3g0448011 RchiOBHm_Chr3g0450941 RchiOBHm_Chr3g0450961 RchiOBHm_Chr3g0451051 RchiOBHm_Chr3g0451721 RchiOBHm_Chr3g0453371 RchiOBHm_Chr3g0454881 RchiOBHm_Chr3g0457421 RchiOBHm_Chr3g0457661 RchiOBHm_Chr3g0460011 RchiOBHm_Chr3g0461531 RchiOBHm_Chr3g0461981 RchiOBHm_Chr3g0463471 RchiOBHm_Chr3g0466641 RchiOBHm_Chr3g0468181 RchiOBHm_Chr3g0483351 RchiOBHm_Chr4g0394001 RchiOBHm_Chr4g0397261 RchiOBHm_Chr4g0404531 RchiOBHm_Chr4g0410841 RchiOBHm_Chr4g0415501 RchiOBHm_Chr4g0425221 RchiOBHm_Chr4g0430811 RchiOBHm_Chr5g0010831 RchiOBHm_Chr5g0016831 RchiOBHm_Chr5g0016851 RchiOBHm_Chr5g0031351 RchiOBHm_Chr5g0032151 RchiOBHm_Chr5g0041201 RchiOBHm_Chr5g0042191 RchiOBHm_Chr5g0064121 RchiOBHm_Chr5g0066601 RchiOBHm_Chr5g0078371 RchiOBHm_Chr5g0079271 RchiOBHm_Chr6g0263751 RchiOBHm_Chr6g0285111 RchiOBHm_Chr6g0298961 RchiOBHm_Chr6g0300481 RchiOBHm_Chr6g0303211 RchiOBHm_Chr7g0192341 RchiOBHm_Chr7g0196171 RchiOBHm_Chr7g0200281 RchiOBHm_Chr7g0200551 RchiOBHm_Chr7g0207611 RchiOBHm_Chr7g0212421 RchiOBHm_Chr7g0214991 RchiOBHm_Chr7g0219211 RchiOBHm_Chr7g0242371
rosa_laevigata RLG00000002389 RLG00000007980
rosa_roxburghii Rroxscaffold_1G00053480 Rroxscaffold_2G00090890 Rroxscaffold_2G00099660 Rroxscaffold_2G00134510 Rroxscaffold_3G00221450 Rroxscaffold_3G00240550 Rroxscaffold_4G00305710 Rroxscaffold_4G00306360 Rroxscaffold_4G00306800 Rroxscaffold_4G00329090 Rroxscaffold_5G00382750 Rroxscaffold_5G00385900 Rroxscaffold_6G00403080 Rroxscaffold_7G00172890 Rroxscaffold_7G00186690
rosa_samantha Rh1DG425600
rosa_wichuraiana Rw0G001640 Rw0G009160 Rw0G010480 Rw0G010520 Rw0G013850 Rw0G017170 Rw0G018520 Rw0G019280 Rw0G022780 Rw1G000360 Rw1G001410 Rw1G001630 Rw1G002100 Rw1G006810 Rw1G010680 Rw1G012700 Rw1G016160 Rw1G022180 Rw1G023580 Rw1G025640 Rw1G026310 Rw1G027230 Rw1G028110 Rw1G034180 Rw2G004990 Rw2G005840 Rw2G007350 Rw2G024730 Rw2G025580 Rw2G026670 Rw2G027210 Rw2G029060 Rw2G031560 Rw2G042190 Rw2G043850 Rw2G045990 Rw2G046130 Rw2G049290 Rw2G049310 Rw2G049790 Rw2G052250 Rw3G004350 Rw3G013100 Rw3G015280 Rw3G015720 Rw3G024630 Rw3G026470 Rw3G027840 Rw3G028960 Rw3G029130 Rw3G029160 Rw4G000280 Rw4G006650 Rw4G008970 Rw4G009310 Rw4G011730 Rw4G012000 Rw4G012610 Rw4G014300 Rw4G014690 Rw4G015190 Rw4G016470 Rw4G020750 Rw4G025060 Rw4G025080 Rw5G005610 Rw5G010380 Rw5G013970 Rw5G015130 Rw5G015250 Rw5G017640 Rw5G019910 Rw5G022410 Rw5G023550 Rw5G029710 Rw5G037650 Rw5G038280 Rw5G038570 Rw5G041550 Rw5G042600 Rw5G043910 Rw5G047850 Rw5G048200 Rw5G049920 Rw6G000260 Rw6G000530 Rw6G001710 Rw6G005090 Rw6G006730 Rw6G009310 Rw6G010950 Rw6G011630 Rw6G012080 Rw6G012750 Rw6G015970 Rw6G020700 Rw6G024350 Rw7G008540 Rw7G016620 Rw7G019400 Rw7G020010 Rw7G024240 Rw7G025630 Rw7G027550 Rw7G027770 Rw7G027960 Rw7G028450 Rw7G031280 Rw7G031970 Rw7G032180 Rw7G033590 Rw7G033720 Rw7G033890 Rw7G041800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 424
Acc65I GGTACC 1 cut(s) 873
AccB1I GGYRCC 2 cut(s) 873, 907
AccI GTMKAC 2 cut(s) 25, 49
AciI CCGC 1 cut(s) 938
AclI AACGTT 1 cut(s) 103
AclWI GGATC 2 cut(s) 473, 772
AcoI YGGCCR 1 cut(s) 533
AcuI CTGAAG 1 cut(s) 96
AfaI GTAC 4 cut(s) 371, 447, 875, 897
AfiI CCNNNNNNNGG 4 cut(s) 14, 93, 647, 883
AflIII ACRYGT 1 cut(s) 851
AgsI TTSAA 8 cut(s) 101, 137, 601, 623, 631, 666, 837, 883
AjnI CCWGG 2 cut(s) 13, 640
AleI CACNNNNGTG 1 cut(s) 194
AluBI AGCT 6 cut(s) 93, 116, 149, 276, 589, 638
AluI AGCT 6 cut(s) 93, 116, 149, 276, 589, 638
Alw21I GWGCWC 1 cut(s) 1102
AlwI GGATC 2 cut(s) 473, 772
Ama87I CYCGRG 1 cut(s) 144
AoxI GGCC 2 cut(s) 533, 840
ApeKI GCWGC 1 cut(s) 605
AseI ATTAAT 1 cut(s) 512
Asp718I GGTACC 1 cut(s) 873
AspS9I GGNCC 2 cut(s) 299, 810
AsuC2I CCSGG 2 cut(s) 742, 962
AsuHPI GGTGA 1 cut(s) 1043
AvaI CYCGRG 1 cut(s) 144
AvaII GGWCC 2 cut(s) 299, 810
BanI GGYRCC 2 cut(s) 873, 907
BarI GAAGNNNNNNTAC 2 cut(s) 384, 416
BbsI GAAGAC 1 cut(s) 256
Bbv12I GWGCWC 1 cut(s) 1102
BbvCI CCTCAGC 2 cut(s) 819, 869
BbvI GCAGC 1 cut(s) 617
BciT130I CCWGG 2 cut(s) 15, 642
BcnI CCSGG 2 cut(s) 742, 962
BfuAI ACCTGC 1 cut(s) 424
BglII AGATCT 1 cut(s) 292
BisI GCNGC 2 cut(s) 606, 939
BlsI GCNGC 2 cut(s) 607, 940
Bme1390I CCNGG 4 cut(s) 15, 642, 742, 962
Bme18I GGWCC 2 cut(s) 299, 810
BmeT110I CYCGRG 1 cut(s) 144
BmgT120I GGNCC 2 cut(s) 299, 810
BmiI GGNNCC 3 cut(s) 435, 875, 909
BmrFI CCNGG 4 cut(s) 15, 642, 742, 962
BmsI GCATC 2 cut(s) 688, 1126
BpiI GAAGAC 1 cut(s) 256
BpmI CTGGAG 2 cut(s) 624, 1080
Bpu10I CCTNAGC 2 cut(s) 819, 869
BpuMI CCSGG 2 cut(s) 742, 962
BsaJI CCNNGG 2 cut(s) 316, 757
BsaWI WCCGGW 1 cut(s) 436
Bsc4I CCNNNNNNNGG 4 cut(s) 14, 93, 647, 883
Bse118I RCCGGY 1 cut(s) 729
Bse1I ACTGG 1 cut(s) 1063
BseBI CCWGG 2 cut(s) 15, 642
BseDI CCNNGG 2 cut(s) 316, 757
BseLI CCNNNNNNNGG 4 cut(s) 14, 93, 647, 883
BseMII CTCAG 3 cut(s) 810, 858, 860
BseNI ACTGG 1 cut(s) 1063
BseX3I CGGCCG 1 cut(s) 533
BseXI GCAGC 1 cut(s) 617
Bsh1285I CGRYCG 1 cut(s) 536
BshFI GGCC 2 cut(s) 535, 842
BshNI GGYRCC 2 cut(s) 873, 907
BsiEI CGRYCG 1 cut(s) 536
BsiHKAI GWGCWC 1 cut(s) 1102
BsiHKCI CYCGRG 1 cut(s) 144
BsiSI CCGG 5 cut(s) 437, 536, 730, 741, 962
BslFI GGGAC 1 cut(s) 70
BslI CCNNNNNNNGG 4 cut(s) 14, 93, 647, 883
BsmFI GGGAC 1 cut(s) 70
BsnI GGCC 2 cut(s) 535, 842
BsoBI CYCGRG 1 cut(s) 144
Bsp1286I GDGCHC 1 cut(s) 1102
Bsp143I GATC 5 cut(s) 253, 292, 335, 478, 764
BspACI CCGC 1 cut(s) 938
BspANI GGCC 2 cut(s) 535, 842
BspCNI CTCAG 3 cut(s) 811, 857, 861
BspHI TCATGA 1 cut(s) 970
BspLI GGNNCC 3 cut(s) 435, 875, 909
BspMI ACCTGC 1 cut(s) 424
BspPI GGATC 2 cut(s) 473, 772
BspT107I GGYRCC 2 cut(s) 873, 907
BsrFI RCCGGY 1 cut(s) 729
BsrI ACTGG 1 cut(s) 1063
BssAI RCCGGY 1 cut(s) 729
BssECI CCNNGG 2 cut(s) 316, 757
BssMI GATC 5 cut(s) 253, 292, 335, 478, 764
BssT1I CCWWGG 2 cut(s) 316, 757
Bst2UI CCWGG 2 cut(s) 15, 642
Bst4CI ACNGT 5 cut(s) 23, 193, 498, 802, 1009
Bst6I CTCTTC 1 cut(s) 115
BstC8I GCNNGC 1 cut(s) 1098
BstDEI CTNAG 5 cut(s) 563, 819, 844, 869, 1121
BstENI CCTNNNNNAGG 1 cut(s) 881
BstKTI GATC 5 cut(s) 256, 295, 338, 481, 767
BstMBI GATC 5 cut(s) 253, 292, 335, 478, 764
BstMCI CGRYCG 1 cut(s) 536
BstMWI GCNNNNNNNGC 2 cut(s) 707, 982
BstNI CCWGG 2 cut(s) 15, 642
BstNSI RCATGY 2 cut(s) 855, 1117
BstSCI CCNGG 4 cut(s) 13, 640, 740, 960
BstV1I GCAGC 1 cut(s) 617
BstV2I GAAGAC 1 cut(s) 256
BstX2I RGATCY 2 cut(s) 292, 478
BstXI CCANNNNNNTGG 1 cut(s) 128
BstYI RGATCY 2 cut(s) 292, 478
BstZI CGGCCG 1 cut(s) 533
BsuRI GGCC 2 cut(s) 535, 842
BtsI GCAGTG 1 cut(s) 951
BtsIMutI CAGTG 2 cut(s) 189, 951
BveI ACCTGC 1 cut(s) 424
Cac8I GCNNGC 1 cut(s) 1098
CciI TCATGA 1 cut(s) 970
Cfr10I RCCGGY 1 cut(s) 729
Cfr13I GGNCC 2 cut(s) 299, 810
CseI GACGC 1 cut(s) 72
CsiI ACCWGGT 1 cut(s) 13
Csp6I GTAC 4 cut(s) 370, 446, 874, 896
CviAII CATG 4 cut(s) 777, 852, 971, 1114
CviQI GTAC 4 cut(s) 370, 446, 874, 896
DdeI CTNAG 5 cut(s) 563, 819, 844, 869, 1121
DpnI GATC 5 cut(s) 255, 294, 337, 480, 766
DpnII GATC 5 cut(s) 253, 292, 335, 478, 764
DraI TTTAAA 1 cut(s) 283
EaeI YGGCCR 1 cut(s) 533
EagI CGGCCG 1 cut(s) 533
Eam1104I CTCTTC 1 cut(s) 115
EarI CTCTTC 1 cut(s) 115
EclXI CGGCCG 1 cut(s) 533
Eco130I CCWWGG 2 cut(s) 316, 757
Eco32I GATATC 3 cut(s) 382, 491, 541
Eco47I GGWCC 2 cut(s) 299, 810
Eco52I CGGCCG 1 cut(s) 533
Eco57I CTGAAG 1 cut(s) 96
Eco88I CYCGRG 1 cut(s) 144
EcoNI CCTNNNNNAGG 1 cut(s) 881
EcoO109I RGGNCCY 1 cut(s) 810
EcoRII CCWGG 2 cut(s) 13, 640
EcoRV GATATC 3 cut(s) 382, 491, 541
EcoT14I CCWWGG 2 cut(s) 316, 757
EcoT22I ATGCAT 1 cut(s) 1119
ErhI CCWWGG 2 cut(s) 316, 757
FaeI CATG 4 cut(s) 780, 855, 974, 1117
FaqI GGGAC 1 cut(s) 70
FatI CATG 4 cut(s) 776, 851, 970, 1113
FauNDI CATATG 1 cut(s) 1048
FblI GTMKAC 2 cut(s) 25, 49
Fnu4HI GCNGC 2 cut(s) 606, 939
Fsp4HI GCNGC 2 cut(s) 606, 939
GluI GCNGC 2 cut(s) 606, 939
GsuI CTGGAG 2 cut(s) 624, 1080
HaeIII GGCC 2 cut(s) 535, 842
HapII CCGG 5 cut(s) 437, 536, 730, 741, 962
HgaI GACGC 1 cut(s) 72
Hin1II CATG 4 cut(s) 780, 855, 974, 1117
HincII GTYRAC 2 cut(s) 26, 50
HindII GTYRAC 2 cut(s) 26, 50
HinfI GANTC 2 cut(s) 51, 348
HpaII CCGG 5 cut(s) 437, 536, 730, 741, 962
HphI GGTGA 1 cut(s) 1043
Hpy166II GTNNAC 6 cut(s) 26, 50, 372, 556, 857, 896
Hpy188I TCNGA 1 cut(s) 1040
Hpy188III TCNNGA 3 cut(s) 144, 971, 1013
Hpy8I GTNNAC 6 cut(s) 26, 50, 372, 556, 857, 896
Hpy99I CGWCG 1 cut(s) 498
HpyAV CCTTC 4 cut(s) 235, 620, 672, 877
HpyCH4III ACNGT 5 cut(s) 23, 193, 498, 802, 1009
HpyCH4IV ACGT 1 cut(s) 103
HpyCH4V TGCA 8 cut(s) 419, 577, 679, 946, 956, 1054, 1073, 1117
HpyF10VI GCNNNNNNNGC 2 cut(s) 707, 982
HpyF3I CTNAG 5 cut(s) 563, 819, 844, 869, 1121
HpySE526I ACGT 1 cut(s) 103
Hsp92II CATG 4 cut(s) 780, 855, 974, 1117
KpnI GGTACC 1 cut(s) 877
Kzo9I GATC 5 cut(s) 253, 292, 335, 478, 764
LmnI GCTCC 1 cut(s) 643
Lsp1109I GCAGC 1 cut(s) 617
LweI GCATC 2 cut(s) 688, 1126
MabI ACCWGGT 1 cut(s) 13
MaeII ACGT 1 cut(s) 103
MaeIII GTNAC 6 cut(s) 17, 721, 736, 796, 847, 926
MalI GATC 5 cut(s) 255, 294, 337, 480, 766
MboI GATC 5 cut(s) 253, 292, 335, 478, 764
MboII GAAGA 3 cut(s) 102, 256, 611
MfeI CAATTG 1 cut(s) 674
MflI RGATCY 2 cut(s) 292, 478
MhlI GDGCHC 1 cut(s) 1102
MluCI AATT 6 cut(s) 126, 509, 513, 569, 674, 1104
MlyI GAGTC 1 cut(s) 45
Mph1103I ATGCAT 1 cut(s) 1119
MseI TTAA 4 cut(s) 75, 282, 512, 1023
MslI CAYNNNNRTG 3 cut(s) 191, 194, 326
MspA1I CMGCKG 1 cut(s) 276
MspI CCGG 5 cut(s) 437, 536, 730, 741, 962
MspR9I CCNGG 4 cut(s) 15, 642, 742, 962
MunI CAATTG 1 cut(s) 674
MvaI CCWGG 2 cut(s) 15, 642
MwoI GCNNNNNNNGC 2 cut(s) 707, 982
NciI CCSGG 2 cut(s) 742, 962
NdeI CATATG 1 cut(s) 1048
NdeII GATC 5 cut(s) 253, 292, 335, 478, 764
NlaIII CATG 4 cut(s) 780, 855, 974, 1117
NlaIV GGNNCC 3 cut(s) 435, 875, 909
NmeAIII GCCGAG 1 cut(s) 511
NmuCI GTSAC 2 cut(s) 796, 926
NsiI ATGCAT 1 cut(s) 1119
NspI RCATGY 2 cut(s) 855, 1117
OliI CACNNNNGTG 1 cut(s) 194
PagI TCATGA 1 cut(s) 970
PciI ACATGT 1 cut(s) 851
PfeI GAWTC 1 cut(s) 348
PflFI GACNNNGTC 1 cut(s) 648
PfoI TCCNGGA 1 cut(s) 640
PkrI GCNGC 2 cut(s) 607, 940
PleI GAGTC 1 cut(s) 45
PpsI GAGTC 1 cut(s) 45
PpuMI RGGWCCY 1 cut(s) 810
PscI ACATGT 1 cut(s) 851
PshBI ATTAAT 1 cut(s) 512
Psp1406I AACGTT 1 cut(s) 103
Psp5II RGGWCCY 1 cut(s) 810
Psp6I CCWGG 2 cut(s) 13, 640
PspGI CCWGG 2 cut(s) 13, 640
PspN4I GGNNCC 3 cut(s) 435, 875, 909
PspPI GGNCC 2 cut(s) 299, 810
PspPPI RGGWCCY 1 cut(s) 810
PsuI RGATCY 2 cut(s) 292, 478
PsyI GACNNNGTC 1 cut(s) 648
PvuII CAGCTG 1 cut(s) 276
RsaI GTAC 4 cut(s) 371, 447, 875, 897
RsaNI GTAC 4 cut(s) 370, 446, 874, 896
RseI CAYNNNNRTG 3 cut(s) 191, 194, 326
SalI GTCGAC 2 cut(s) 24, 48
SaqAI TTAA 4 cut(s) 75, 282, 512, 1023
SatI GCNGC 2 cut(s) 606, 939
Sau3AI GATC 5 cut(s) 253, 292, 335, 478, 764
Sau96I GGNCC 2 cut(s) 299, 810
SchI GAGTC 1 cut(s) 45
ScrFI CCNGG 4 cut(s) 15, 642, 742, 962
SduI GDGCHC 1 cut(s) 1102
SexAI ACCWGGT 1 cut(s) 13
SfaNI GCATC 2 cut(s) 688, 1126
SinI GGWCC 2 cut(s) 299, 810
SmiMI CAYNNNNRTG 3 cut(s) 191, 194, 326
Sse9I AATT 6 cut(s) 126, 509, 513, 569, 674, 1104
SsiI CCGC 1 cut(s) 938
StyD4I CCNGG 4 cut(s) 13, 640, 740, 960
StyI CCWWGG 2 cut(s) 316, 757
TaaI ACNGT 5 cut(s) 23, 193, 498, 802, 1009
TaiI ACGT 1 cut(s) 106
TaqI TCGA 5 cut(s) 25, 49, 487, 493, 613
TasI AATT 6 cut(s) 126, 509, 513, 569, 674, 1104
TatI WGTACW 1 cut(s) 369
TauI GCSGC 1 cut(s) 941
TfiI GAWTC 1 cut(s) 348
Tru1I TTAA 4 cut(s) 75, 282, 512, 1023
Tru9I TTAA 4 cut(s) 75, 282, 512, 1023
TscAI CASTG 2 cut(s) 196, 958
TseFI GTSAC 2 cut(s) 796, 926
TseI GCWGC 1 cut(s) 605
Tsp45I GTSAC 2 cut(s) 796, 926
TspDTI ATGAA 3 cut(s) 54, 175, 995
TspGWI ACGGA 1 cut(s) 84
TspRI CASTG 2 cut(s) 196, 958
Tth111I GACNNNGTC 1 cut(s) 648
VpaK11BI GGWCC 2 cut(s) 299, 810
VspI ATTAAT 1 cut(s) 512
XagI CCTNNNNNAGG 1 cut(s) 881
XceI RCATGY 2 cut(s) 855, 1117
XmiI GTMKAC 2 cut(s) 25, 49
Zsp2I ATGCAT 1 cut(s) 1119
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.