Reverse transcriptase (RNA-dependent DNA polymerase)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_2 | PF07727 | 3 - 84 | 2.2e-15 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 549 |
| AcsI | RAATTY | 2 cut(s) | 279, 538 |
| AdeI | CACNNNGTG | 1 cut(s) | 514 |
| AfaI | GTAC | 5 cut(s) | 194, 242, 290, 318, 574 |
| AflII | CTTAAG | 2 cut(s) | 50, 188 |
| AgsI | TTSAA | 2 cut(s) | 286, 562 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 397 |
| AjnI | CCWGG | 1 cut(s) | 215 |
| AluBI | AGCT | 2 cut(s) | 77, 302 |
| AluI | AGCT | 2 cut(s) | 77, 302 |
| Alw26I | GTCTC | 1 cut(s) | 139 |
| ApoI | RAATTY | 2 cut(s) | 279, 538 |
| AsuHPI | GGTGA | 1 cut(s) | 194 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 31 |
| BbvCI | CCTCAGC | 1 cut(s) | 483 |
| BciT130I | CCWGG | 1 cut(s) | 217 |
| BcoDI | GTCTC | 1 cut(s) | 139 |
| BfaI | CTAG | 3 cut(s) | 152, 305, 477 |
| BfmI | CTRYAG | 1 cut(s) | 140 |
| BfrI | CTTAAG | 2 cut(s) | 50, 188 |
| BmcAI | AGTACT | 3 cut(s) | 194, 290, 318 |
| Bme1390I | CCNGG | 1 cut(s) | 217 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 397 |
| BmrFI | CCNGG | 1 cut(s) | 217 |
| BmsI | GCATC | 3 cut(s) | 64, 256, 355 |
| Bpu10I | CCTNAGC | 1 cut(s) | 483 |
| BpuEI | CTTGAG | 2 cut(s) | 365, 551 |
| BsaJI | CCNNGG | 1 cut(s) | 216 |
| Bse1I | ACTGG | 1 cut(s) | 115 |
| Bse3DI | GCAATG | 1 cut(s) | 121 |
| BseBI | CCWGG | 1 cut(s) | 217 |
| BseDI | CCNNGG | 1 cut(s) | 216 |
| BseGI | GGATG | 2 cut(s) | 100, 271 |
| BseMI | GCAATG | 1 cut(s) | 121 |
| BseMII | CTCAG | 5 cut(s) | 45, 150, 474, 480, 524 |
| BseNI | ACTGG | 1 cut(s) | 115 |
| Bsh1236I | CGCG | 1 cut(s) | 549 |
| BsmAI | GTCTC | 1 cut(s) | 139 |
| Bsp143I | GATC | 1 cut(s) | 473 |
| BspCNI | CTCAG | 5 cut(s) | 44, 151, 475, 481, 525 |
| BspFNI | CGCG | 1 cut(s) | 549 |
| BspMAI | CTGCAG | 1 cut(s) | 144 |
| BspTI | CTTAAG | 2 cut(s) | 50, 188 |
| BsrDI | GCAATG | 1 cut(s) | 121 |
| BsrI | ACTGG | 1 cut(s) | 115 |
| BssECI | CCNNGG | 1 cut(s) | 216 |
| BssMI | GATC | 1 cut(s) | 473 |
| Bst2UI | CCWGG | 1 cut(s) | 217 |
| Bst4CI | ACNGT | 2 cut(s) | 124, 321 |
| BstAFI | CTTAAG | 2 cut(s) | 50, 188 |
| BstDEI | CTNAG | 6 cut(s) | 31, 159, 199, 483, 489, 533 |
| BstF5I | GGATG | 2 cut(s) | 100, 271 |
| BstFNI | CGCG | 1 cut(s) | 549 |
| BstKTI | GATC | 1 cut(s) | 476 |
| BstMAI | GTCTC | 1 cut(s) | 139 |
| BstMBI | GATC | 1 cut(s) | 473 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 374 |
| BstNI | CCWGG | 1 cut(s) | 217 |
| BstSCI | CCNGG | 1 cut(s) | 215 |
| BstSFI | CTRYAG | 1 cut(s) | 140 |
| BstUI | CGCG | 1 cut(s) | 549 |
| BtsCI | GGATG | 2 cut(s) | 100, 271 |
| BtsIMutI | CAGTG | 1 cut(s) | 108 |
| Csp6I | GTAC | 5 cut(s) | 193, 241, 289, 317, 573 |
| CviAII | CATG | 3 cut(s) | 262, 444, 577 |
| CviJI | RGCY | 9 cut(s) | 77, 155, 215, 302, 357, 377, 488, 506, 532 |
| CviKI_1 | RGCY | 9 cut(s) | 77, 155, 215, 302, 357, 377, 488, 506, 532 |
| CviQI | GTAC | 5 cut(s) | 193, 241, 289, 317, 573 |
| DdeI | CTNAG | 6 cut(s) | 31, 159, 199, 483, 489, 533 |
| DpnI | GATC | 1 cut(s) | 475 |
| DpnII | GATC | 1 cut(s) | 473 |
| DraIII | CACNNNGTG | 1 cut(s) | 514 |
| DriI | GACNNNNNGTC | 1 cut(s) | 397 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 397 |
| EcoRII | CCWGG | 1 cut(s) | 215 |
| EcoT22I | ATGCAT | 1 cut(s) | 370 |
| FaeI | CATG | 3 cut(s) | 265, 447, 580 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 182, 214 |
| FatI | CATG | 3 cut(s) | 261, 443, 576 |
| FokI | GGATG | 2 cut(s) | 107, 278 |
| FspBI | CTAG | 3 cut(s) | 152, 305, 477 |
| Hin1II | CATG | 3 cut(s) | 265, 447, 580 |
| HincII | GTYRAC | 1 cut(s) | 402 |
| HindII | GTYRAC | 1 cut(s) | 402 |
| HinfI | GANTC | 2 cut(s) | 231, 256 |
| HphI | GGTGA | 1 cut(s) | 194 |
| Hpy166II | GTNNAC | 2 cut(s) | 185, 402 |
| Hpy188I | TCNGA | 2 cut(s) | 34, 160 |
| Hpy188III | TCNNGA | 2 cut(s) | 344, 568 |
| Hpy8I | GTNNAC | 2 cut(s) | 185, 402 |
| HpyAV | CCTTC | 4 cut(s) | 61, 166, 221, 303 |
| HpyCH4III | ACNGT | 2 cut(s) | 124, 321 |
| HpyCH4V | TGCA | 2 cut(s) | 142, 368 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 374 |
| HpyF3I | CTNAG | 6 cut(s) | 31, 159, 199, 483, 489, 533 |
| Hsp92II | CATG | 3 cut(s) | 265, 447, 580 |
| Kzo9I | GATC | 1 cut(s) | 473 |
| LpnPI | CCDG | 6 cut(s) | 96, 202, 229, 257, 363, 379 |
| LweI | GCATC | 3 cut(s) | 64, 256, 355 |
| MaeI | CTAG | 3 cut(s) | 152, 305, 477 |
| MaeIII | GTNAC | 6 cut(s) | 14, 70, 257, 410, 439, 543 |
| MalI | GATC | 1 cut(s) | 475 |
| MboI | GATC | 1 cut(s) | 473 |
| MluCI | AATT | 6 cut(s) | 81, 204, 279, 433, 521, 538 |
| MlyI | GAGTC | 1 cut(s) | 265 |
| MnlI | CCTC | 7 cut(s) | 166, 202, 240, 340, 390, 422, 478 |
| Mph1103I | ATGCAT | 1 cut(s) | 370 |
| MseI | TTAA | 3 cut(s) | 51, 189, 293 |
| MslI | CAYNNNNRTG | 1 cut(s) | 264 |
| MspCI | CTTAAG | 2 cut(s) | 50, 188 |
| MspR9I | CCNGG | 1 cut(s) | 217 |
| MvaI | CCWGG | 1 cut(s) | 217 |
| MvnI | CGCG | 1 cut(s) | 549 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 374 |
| NdeII | GATC | 1 cut(s) | 473 |
| NlaIII | CATG | 3 cut(s) | 265, 447, 580 |
| NmuCI | GTSAC | 1 cut(s) | 257 |
| NsiI | ATGCAT | 1 cut(s) | 370 |
| PfeI | GAWTC | 1 cut(s) | 231 |
| PleI | GAGTC | 1 cut(s) | 264 |
| PpsI | GAGTC | 1 cut(s) | 264 |
| Psp6I | CCWGG | 1 cut(s) | 215 |
| PspGI | CCWGG | 1 cut(s) | 215 |
| PstI | CTGCAG | 1 cut(s) | 144 |
| RsaI | GTAC | 5 cut(s) | 194, 242, 290, 318, 574 |
| RsaNI | GTAC | 5 cut(s) | 193, 241, 289, 317, 573 |
| RseI | CAYNNNNRTG | 1 cut(s) | 264 |
| SaqAI | TTAA | 3 cut(s) | 51, 189, 293 |
| Sau3AI | GATC | 1 cut(s) | 473 |
| ScaI | AGTACT | 3 cut(s) | 194, 290, 318 |
| SchI | GAGTC | 1 cut(s) | 265 |
| ScrFI | CCNGG | 1 cut(s) | 217 |
| SetI | ASST | 9 cut(s) | 12, 72, 79, 213, 304, 351, 401, 422, 433 |
| SfaNI | GCATC | 3 cut(s) | 64, 256, 355 |
| SfcI | CTRYAG | 1 cut(s) | 140 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 264 |
| SmlI | CTYRAG | 4 cut(s) | 50, 188, 344, 566 |
| SmoI | CTYRAG | 4 cut(s) | 50, 188, 344, 566 |
| Sse9I | AATT | 6 cut(s) | 81, 204, 279, 433, 521, 538 |
| SspMI | CTAG | 3 cut(s) | 152, 305, 477 |
| StyD4I | CCNGG | 1 cut(s) | 215 |
| TaaI | ACNGT | 2 cut(s) | 124, 321 |
| TasI | AATT | 6 cut(s) | 81, 204, 279, 433, 521, 538 |
| TatI | WGTACW | 3 cut(s) | 192, 288, 316 |
| TfiI | GAWTC | 1 cut(s) | 231 |
| Tru1I | TTAA | 3 cut(s) | 51, 189, 293 |
| Tru9I | TTAA | 3 cut(s) | 51, 189, 293 |
| TscAI | CASTG | 1 cut(s) | 115 |
| TseFI | GTSAC | 1 cut(s) | 257 |
| Tsp45I | GTSAC | 1 cut(s) | 257 |
| TspDTI | ATGAA | 1 cut(s) | 185 |
| TspGWI | ACGGA | 1 cut(s) | 525 |
| TspRI | CASTG | 1 cut(s) | 115 |
| Vha464I | CTTAAG | 2 cut(s) | 50, 188 |
| XapI | RAATTY | 2 cut(s) | 279, 538 |
| XspI | CTAG | 3 cut(s) | 152, 305, 477 |
| ZrmI | AGTACT | 3 cut(s) | 194, 290, 318 |
| Zsp2I | ATGCAT | 1 cut(s) | 370 |