RchiOBHm_Chr1g0382741

beta-galactosidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000071
Physical Location & Seq
Forward (+)
67422968 .. 67425204
2237 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ60568

Sequence Viewer

Length: 2094 bp
ATGGATGTTACATTCCATGAACATGATCTACATTTTTCCCCGAAGGCTACTCTTCAGGGGGAGAATGATATTGAGGAAGAGCAGTCTTCGAGGGATTGCTTGTGTCCACCCTTGGAACCCATGGACATCCAAGAGCATGGAAGTACTGGAGAAACAAGAATTGAGCATGGAAATACTGAAAGGAGCAACCAGTTACCGACATCGGAAGCAAACTCTAGAATCGTTGAAAATGGAAATCAGCTGCCAACTCCAGAATCACCAGTAAGAGAGATTTCTTCCCCTTCTACTATCCCATCAACACCAATGCTCCCTGAGGATGATCCAGAGGTAATTAATAACCCTGTGTTTGAATTTCATGATAATATAAATTCTGAGCCTAACACTGAAACGGAACCAAGTCATAAATTGCCATTTCGAAAAAATAGAGGTCAACCAAAGGCTCAATATGAACCAGATCCTAAAGCCAAGGCCAAATATCCCATAAGCAATTACATGTCATCCCATAGGTTATCCAAGTCATATGCGTCCTTTGTATTTCATTTATCTGCTATTATCATTCCAAATAAAGTACAGGATGCTCTAGCAGATCGTAAGTGGACTAAAGCTATGGAAGAGGAAATGGAAGCCTTGCAAAAGAGTCAAACATGGGAACTAGTCCCAAAACCAGCAGGGAAAAGAATAGTGGGGTGCAGATGGATCTATACTTTGAAGTACGCAGCTGATGGTACATTGGATAGATATAAAGCCAGGTTGGTTGCTAAAGGGTATACTCAAACATATGGTATTGACTATCAAGAGACTTTTGCACCGGTGGCCAAGATGAATACTGTTCGAGTACTACTGTCATTAGCGGCTAACCTTGACTGGCCTCTGAAGCAATTTGATGTAAAAAATGCCTTCCTACATGGAGACTTGAAGGAAGAAGTCTACATGGATCTACCTCCTGGCTATTCTCTACCTTCACAAGCAGGAATGGTGTGCAAGTTGAAAAAATCCCTTTATGGACTAAAACAGTCCCCCAGGGCATGGTTTGGGAGATTCAGCCAATCTATGAAACAGTTTGGTTATAAACAAAGCAACTCTGACCATACACTGTTTCTGAAACACAGAAAAGATAAACTTACTGCACTTATCATTTATGTTGATGATATGATTGTGACAGGTAATGACCCAGAAGAAGTCAAGAAACTAGAAGCACATCTATCATCTGTTTTTGAGATGAAAGATCTTGGAGGATTGAAATACTTCTTGGGCATTGAGGTGGCTAGATCAAAAGAAGGCATTTCCCTATCTCAAAGGAAATATGTGGTTGACTTACTCATAGAGACTGGTTTACTAGCATGTCAACCAGCAGATACACCGATGGAGCAAAATCACAAATTAGCAGAATATCCAGACCAAGTGCCTACTAACAAAGAGAGATATCAAAGGTTAGTAGGCAAGCTCATTTATCTCTCACATACACGACCTGATATTGCATATGCTGTAAGCGTTGTAAGTCAATTCATGCATGCACCAAGTGAAGATCACATGCACGCGGTACATAGAATTCTGAGGTATTTGAAAACAAATCCCGGTAAAGGGATCATGTTTTCCAAGAATAACCACACAGACATAGCTGGATACACAGATGCAGATTGGGCTGGTTCTATCACTGATAGAAGGTCTACTTCTGGTTACTTTACTTTTGTGGGAGGTAACTTGGTCACGTGGAGAAGCAAGAAGCAAAAAGTGGTTGCTAGATCCAGTGCAGAAGCTGAGTACAGAGGAATGGCTCATGGAGTATGCGAAATGCTATGGCTTCGTCATTTGATGAAAGACTTGGGGTTCAAACCCAAGCATGCTATGAATTTGTATTGTGACAATAAAGCAGCCATTGATATAGCACACAATCCAGTTCAACATGATAGAACAAAACATGTTGAAGTGGATCGACATTTCATCAAAGAGAAGTTGGAGTCAAAAACCATTAACATGCCACATGTGTGTACTGAAGATCAACTTGCAGATATCCTGACCAAAGCAGTTTCTGGAAAAGTGTTCCACAGCTCACTAGACAAGTTGGGTATGCGAGACATCTATTCCCCAACTTGA

Protein Analysis

697

Amino Acids

79.14

Weight (kDa)

7.4

Isoelectric Point (pI)

44.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_2 PF07727 214 - 456 4.3e-71 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000071)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G23160 AT4G23160
fragaria_vesca FvH4_2g08111 FvH4_2g17332 FvH4_2g18071 FvH4_2g20531 FvH4_2g20842 FvH4_2g20842 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g24231 FvH4_2g24232 FvH4_3g00831 FvH4_3g00831 FvH4_3g03561 FvH4_3g03561 FvH4_3g10282 FvH4_3g18165 FvH4_3g19021 FvH4_3g24071 FvH4_3g33123 FvH4_3g33970 FvH4_3g38851 FvH4_3g39133 FvH4_3g39271 FvH4_4g00981 FvH4_4g08191 FvH4_4g08311 FvH4_4g08311 FvH4_4g08311 FvH4_4g09341 FvH4_4g12550 FvH4_4g12550 FvH4_4g12550 FvH4_4g13391 FvH4_4g14842 FvH4_4g27901 FvH4_5g11561 FvH4_5g15611 FvH4_5g17991 FvH4_5g27871 FvH4_5g29995 FvH4_5g39662 FvH4_6g02392 FvH4_6g12781 FvH4_6g20106 FvH4_6g20106 FvH4_6g20106 FvH4_6g30872 FvH4_6g34901 FvH4_6g35632 FvH4_6g36661 FvH4_6g43795 FvH4_6g44611 FvH4_7g01791 FvH4_7g04041 FvH4_7g12551 FvH4_7g23351
malus_domestica MD00G1134200.v1.1 MD01G1096500.v1.1 MD01G1128200.v1.1 MD02G1250500.v1.1 MD02G1294900.v1.1 MD03G1121800.v1.1 MD04G1021400.v1.1 MD04G1051100.v1.1 MD04G1051300.v1.1 MD04G1099000.v1.1 MD05G1047900.v1.1 MD05G1298000.v1.1 MD06G1064200.v1.1 MD06G1120600.v1.1 MD07G1013900.v1.1 MD09G1226900.v1.1 MD10G1196700.v1.1 MD10G1307000.v1.1 MD10G1338900.v1.1 MD11G1107300.v1.1 MD11G1138300.v1.1 MD11G1236700.v1.1 MD12G1032500.v1.1 MD12G1150100.v1.1 MD12G1247800.v1.1 MD17G1267900.v1.1
pyrus_communis pycom02g03660 pycom02g13370 pycom02g14840 pycom02g18400 pycom02g18880 pycom02g22740 pycom04g08800 pycom04g15770 pycom05g07980 pycom05g19640 pycom06g09360 pycom07g13160 pycom08g11820 pycom08g21740 pycom09g19980 pycom10g04810 pycom10g05420 pycom10g14650 pycom11g03140 pycom11g21550 pycom12g14740 pycom13g01600 pycom13g29510 pycom14g07060 pycom15g01990 pycom15g19850 pycom15g30860 pycom16g15290 pycom16g16250 pycom16g25390 pycom17g17270 pycom520g00070
rosa_chinensis RchiOBHm_Chr1g0316691 RchiOBHm_Chr1g0320751 RchiOBHm_Chr1g0320771 RchiOBHm_Chr1g0322231 RchiOBHm_Chr1g0322861 RchiOBHm_Chr1g0328471 RchiOBHm_Chr1g0333321 RchiOBHm_Chr1g0337871 RchiOBHm_Chr1g0339051 RchiOBHm_Chr1g0349861 RchiOBHm_Chr1g0361951 RchiOBHm_Chr1g0365931 RchiOBHm_Chr1g0365981 RchiOBHm_Chr1g0377711 RchiOBHm_Chr1g0381581 RchiOBHm_Chr1g0382741 RchiOBHm_Chr1g0383501 RchiOBHm_Chr2g0101201 RchiOBHm_Chr2g0113601 RchiOBHm_Chr2g0124031 RchiOBHm_Chr2g0135481 RchiOBHm_Chr2g0148361 RchiOBHm_Chr2g0150101 RchiOBHm_Chr2g0154181 RchiOBHm_Chr2g0156071 RchiOBHm_Chr2g0166521 RchiOBHm_Chr2g0166821 RchiOBHm_Chr3g0448011 RchiOBHm_Chr3g0450941 RchiOBHm_Chr3g0450961 RchiOBHm_Chr3g0451051 RchiOBHm_Chr3g0451721 RchiOBHm_Chr3g0453371 RchiOBHm_Chr3g0454881 RchiOBHm_Chr3g0457421 RchiOBHm_Chr3g0457661 RchiOBHm_Chr3g0460011 RchiOBHm_Chr3g0461531 RchiOBHm_Chr3g0461981 RchiOBHm_Chr3g0463471 RchiOBHm_Chr3g0466641 RchiOBHm_Chr3g0468181 RchiOBHm_Chr3g0483351 RchiOBHm_Chr4g0394001 RchiOBHm_Chr4g0397261 RchiOBHm_Chr4g0404531 RchiOBHm_Chr4g0410841 RchiOBHm_Chr4g0415501 RchiOBHm_Chr4g0425221 RchiOBHm_Chr4g0430811 RchiOBHm_Chr5g0010831 RchiOBHm_Chr5g0016831 RchiOBHm_Chr5g0016851 RchiOBHm_Chr5g0031351 RchiOBHm_Chr5g0032151 RchiOBHm_Chr5g0041201 RchiOBHm_Chr5g0042191 RchiOBHm_Chr5g0064121 RchiOBHm_Chr5g0066601 RchiOBHm_Chr5g0078371 RchiOBHm_Chr5g0079271 RchiOBHm_Chr6g0263751 RchiOBHm_Chr6g0285111 RchiOBHm_Chr6g0298961 RchiOBHm_Chr6g0300481 RchiOBHm_Chr6g0303211 RchiOBHm_Chr7g0192341 RchiOBHm_Chr7g0196171 RchiOBHm_Chr7g0200281 RchiOBHm_Chr7g0200551 RchiOBHm_Chr7g0207611 RchiOBHm_Chr7g0212421 RchiOBHm_Chr7g0214991 RchiOBHm_Chr7g0219211 RchiOBHm_Chr7g0242371
rosa_laevigata RLG00000002389 RLG00000007980
rosa_roxburghii Rroxscaffold_1G00053480 Rroxscaffold_2G00090890 Rroxscaffold_2G00099660 Rroxscaffold_2G00134510 Rroxscaffold_3G00221450 Rroxscaffold_3G00240550 Rroxscaffold_4G00305710 Rroxscaffold_4G00306360 Rroxscaffold_4G00306800 Rroxscaffold_4G00329090 Rroxscaffold_5G00382750 Rroxscaffold_5G00385900 Rroxscaffold_6G00403080 Rroxscaffold_7G00172890 Rroxscaffold_7G00186690
rosa_samantha Rh1DG425600
rosa_wichuraiana Rw0G001640 Rw0G009160 Rw0G010480 Rw0G010520 Rw0G013850 Rw0G017170 Rw0G018520 Rw0G019280 Rw0G022780 Rw1G000360 Rw1G001410 Rw1G001630 Rw1G002100 Rw1G006810 Rw1G010680 Rw1G012700 Rw1G016160 Rw1G022180 Rw1G023580 Rw1G025640 Rw1G026310 Rw1G027230 Rw1G028110 Rw1G034180 Rw2G004990 Rw2G005840 Rw2G007350 Rw2G024730 Rw2G025580 Rw2G026670 Rw2G027210 Rw2G029060 Rw2G031560 Rw2G042190 Rw2G043850 Rw2G045990 Rw2G046130 Rw2G049290 Rw2G049310 Rw2G049790 Rw2G052250 Rw3G004350 Rw3G013100 Rw3G015280 Rw3G015720 Rw3G024630 Rw3G026470 Rw3G027840 Rw3G028960 Rw3G029130 Rw3G029160 Rw4G000280 Rw4G006650 Rw4G008970 Rw4G009310 Rw4G011730 Rw4G012000 Rw4G012610 Rw4G014300 Rw4G014690 Rw4G015190 Rw4G016470 Rw4G020750 Rw4G025060 Rw4G025080 Rw5G005610 Rw5G010380 Rw5G013970 Rw5G015130 Rw5G015250 Rw5G017640 Rw5G019910 Rw5G022410 Rw5G023550 Rw5G029710 Rw5G037650 Rw5G038280 Rw5G038570 Rw5G041550 Rw5G042600 Rw5G043910 Rw5G047850 Rw5G048200 Rw5G049920 Rw6G000260 Rw6G000530 Rw6G001710 Rw6G005090 Rw6G006730 Rw6G009310 Rw6G010950 Rw6G011630 Rw6G012080 Rw6G012750 Rw6G015970 Rw6G020700 Rw6G024350 Rw7G008540 Rw7G016620 Rw7G019400 Rw7G020010 Rw7G024240 Rw7G025630 Rw7G027550 Rw7G027770 Rw7G027960 Rw7G028450 Rw7G031280 Rw7G031970 Rw7G032180 Rw7G033590 Rw7G033720 Rw7G033890 Rw7G041800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1068
AccB7I CCANNNNNTGG 1 cut(s) 1026
AccI GTMKAC 3 cut(s) 767, 927, 1667
AccII CGCG 1 cut(s) 1538
AciI CCGC 2 cut(s) 851, 1538
AclWI GGATC 7 cut(s) 314, 449, 704, 942, 1592, 1737, 1938
AcoI YGGCCR 1 cut(s) 813
AcsI RAATTY 4 cut(s) 350, 367, 1548, 1849
AcuI CTGAAG 3 cut(s) 38, 893, 2013
AcvI CACGTG 1 cut(s) 1710
AdeI CACNNNGTG 1 cut(s) 1520
AfaI GTAC 8 cut(s) 145, 570, 713, 727, 837, 1542, 1763, 1990
AfiI CCNNNNNNNGG 3 cut(s) 1026, 1580, 1581
AflIII ACRYGT 3 cut(s) 492, 1918, 1981
AgeI ACCGGT 1 cut(s) 808
AhlI ACTAGT 1 cut(s) 652
AjnI CCWGG 3 cut(s) 746, 943, 1019
AjuI GAANNNNNNNTTGG 2 cut(s) 1232, 1264
AleI CACNNNNGTG 1 cut(s) 1984
AluBI AGCT 7 cut(s) 241, 605, 719, 1444, 1619, 1757, 2049
AluI AGCT 7 cut(s) 241, 605, 719, 1444, 1619, 1757, 2049
Alw26I GTCTC 4 cut(s) 791, 903, 1319, 2067
AlwI GGATC 7 cut(s) 314, 449, 704, 942, 1592, 1737, 1938
AlwNI CAGNNNCTG 2 cut(s) 1757, 2030
AoxI GGCC 3 cut(s) 468, 813, 866
ApeKI GCWGC 3 cut(s) 241, 716, 1871
ApoI RAATTY 4 cut(s) 350, 367, 1548, 1849
AseI ATTAAT 1 cut(s) 333
AsiGI ACCGGT 1 cut(s) 808
Asp700I GAANNNNTTC 1 cut(s) 1244
AsuC2I CCSGG 1 cut(s) 1575
AsuHPI GGTGA 1 cut(s) 249
AsuII TTCGAA 1 cut(s) 415
AxyI CCTNAGG 1 cut(s) 312
BalI TGGCCA 1 cut(s) 815
BbrPI CACGTG 1 cut(s) 1710
BbsI GAAGAC 1 cut(s) 78
BbvI GCAGC 3 cut(s) 228, 728, 1883
BccI CCATC 4 cut(s) 301, 687, 716, 1357
BciT130I CCWGG 3 cut(s) 748, 945, 1021
BciVI GTATCC 1 cut(s) 1616
BcnI CCSGG 1 cut(s) 1575
BcoDI GTCTC 4 cut(s) 791, 903, 1319, 2067
BcuI ACTAGT 1 cut(s) 652
BfaI CTAG 8 cut(s) 216, 581, 653, 1190, 1266, 1337, 1740, 2054
BfuI GTATCC 1 cut(s) 1616
BglII AGATCT 1 cut(s) 1225
BisI GCNGC 4 cut(s) 242, 717, 852, 1872
BlsI GCNGC 4 cut(s) 243, 718, 853, 1873
BmcAI AGTACT 2 cut(s) 145, 837
Bme1390I CCNGG 4 cut(s) 748, 945, 1021, 1575
BmiI GGNNCC 2 cut(s) 117, 393
BmrFI CCNGG 4 cut(s) 748, 945, 1021, 1575
BmsI GCATC 2 cut(s) 565, 1621
BpiI GAAGAC 1 cut(s) 78
BpmI CTGGAG 2 cut(s) 168, 234
Bpu14I TTCGAA 1 cut(s) 415
BpuMI CCSGG 1 cut(s) 1575
BsaAI YACGTR 1 cut(s) 1710
BsaJI CCNNGG 5 cut(s) 111, 120, 465, 1019, 1020
BsaWI WCCGGW 1 cut(s) 808
BsaXI ACNNNNNCTCC 2 cut(s) 291, 321
Bsc4I CCNNNNNNNGG 3 cut(s) 1026, 1580, 1581
Bse118I RCCGGY 1 cut(s) 808
Bse1I ACTGG 7 cut(s) 151, 190, 260, 869, 1333, 1746, 1895
Bse21I CCTNAGG 1 cut(s) 312
BseBI CCWGG 3 cut(s) 748, 945, 1021
BseDI CCNNGG 5 cut(s) 111, 120, 465, 1019, 1020
BseGI GGATG 5 cut(s) 10, 126, 322, 497, 580
BseLI CCNNNNNNNGG 3 cut(s) 1026, 1580, 1581
BseMII CTCAG 4 cut(s) 303, 363, 1544, 1749
BseNI ACTGG 7 cut(s) 151, 190, 260, 869, 1333, 1746, 1895
BseXI GCAGC 3 cut(s) 228, 728, 1883
BsgI GTGCAG 3 cut(s) 709, 1110, 1770
Bsh1236I CGCG 1 cut(s) 1538
BshFI GGCC 3 cut(s) 470, 815, 868
BshTI ACCGGT 1 cut(s) 808
BsiSI CCGG 2 cut(s) 809, 1575
BslFI GGGAC 2 cut(s) 641, 1000
BslI CCNNNNNNNGG 3 cut(s) 1026, 1580, 1581
BsmAI GTCTC 4 cut(s) 791, 903, 1319, 2067
BsmFI GGGAC 2 cut(s) 641, 1000
BsnI GGCC 3 cut(s) 470, 815, 868
Bsp119I TTCGAA 1 cut(s) 415
Bsp19I CCATGG 1 cut(s) 120
BspACI CCGC 2 cut(s) 851, 1538
BspANI GGCC 3 cut(s) 470, 815, 868
BspCNI CTCAG 4 cut(s) 304, 364, 1545, 1750
BspFNI CGCG 1 cut(s) 1538
BspHI TCATGA 1 cut(s) 355
BspLI GGNNCC 2 cut(s) 117, 393
BspPI GGATC 7 cut(s) 314, 449, 704, 942, 1592, 1737, 1938
BspQI GCTCTTC 1 cut(s) 72
BspT104I TTCGAA 1 cut(s) 415
BsrFI RCCGGY 1 cut(s) 808
BsrI ACTGG 7 cut(s) 151, 190, 260, 869, 1333, 1746, 1895
BssAI RCCGGY 1 cut(s) 808
BssECI CCNNGG 5 cut(s) 111, 120, 465, 1019, 1020
BssNAI GTATAC 1 cut(s) 768
BssT1I CCWWGG 3 cut(s) 111, 120, 465
Bst1107I GTATAC 1 cut(s) 768
Bst2UI CCWGG 3 cut(s) 748, 945, 1021
Bst4CI ACNGT 5 cut(s) 829, 843, 1014, 1059, 1095
Bst6I CTCTTC 3 cut(s) 57, 72, 606
BstBAI YACGTR 1 cut(s) 1710
BstBI TTCGAA 1 cut(s) 415
BstC8I GCNNGC 4 cut(s) 1442, 1512, 1536, 1842
BstDEI CTNAG 4 cut(s) 312, 372, 1553, 1758
BstDSI CCRYGG 1 cut(s) 120
BstF5I GGATG 5 cut(s) 10, 126, 322, 497, 580
BstFNI CGCG 1 cut(s) 1538
BstMAI GTCTC 4 cut(s) 791, 903, 1319, 2067
BstMWI GCNNNNNNNGC 3 cut(s) 812, 874, 1640
BstNI CCWGG 3 cut(s) 748, 945, 1021
BstNSI RCATGY 8 cut(s) 496, 1344, 1514, 1534, 1844, 1922, 1978, 1985
BstSCI CCNGG 4 cut(s) 746, 943, 1019, 1573
BstUI CGCG 1 cut(s) 1538
BstV1I GCAGC 3 cut(s) 228, 728, 1883
BstV2I GAAGAC 1 cut(s) 78
BstX2I RGATCY 5 cut(s) 454, 696, 934, 1225, 1742
BstXI CCANNNNNNTGG 1 cut(s) 137
BstYI RGATCY 5 cut(s) 454, 696, 934, 1225, 1742
BstZ17I GTATAC 1 cut(s) 768
Bsu36I CCTNAGG 1 cut(s) 312
BsuI GTATCC 1 cut(s) 1616
BsuRI GGCC 3 cut(s) 470, 815, 868
BtgI CCRYGG 1 cut(s) 120
BtsCI GGATG 5 cut(s) 10, 126, 322, 497, 580
BtsIMutI CAGTG 4 cut(s) 381, 1091, 1653, 1753
Cac8I GCNNGC 4 cut(s) 1442, 1512, 1536, 1842
CaiI CAGNNNCTG 2 cut(s) 1757, 2030
CciI TCATGA 1 cut(s) 355
Cfr10I RCCGGY 1 cut(s) 808
CseI GACGC 1 cut(s) 513
Csp6I GTAC 8 cut(s) 144, 569, 712, 726, 836, 1541, 1762, 1989
CspAI ACCGGT 1 cut(s) 808
CviQI GTAC 8 cut(s) 144, 569, 712, 726, 836, 1541, 1762, 1989
DdeI CTNAG 4 cut(s) 312, 372, 1553, 1758
DraIII CACNNNGTG 1 cut(s) 1520
EaeI YGGCCR 1 cut(s) 813
Eam1104I CTCTTC 3 cut(s) 57, 72, 606
EarI CTCTTC 3 cut(s) 57, 72, 606
Eco130I CCWWGG 3 cut(s) 111, 120, 465
Eco32I GATATC 2 cut(s) 1424, 2011
Eco57I CTGAAG 3 cut(s) 38, 893, 2013
Eco72I CACGTG 1 cut(s) 1710
Eco81I CCTNAGG 1 cut(s) 312
EcoRI GAATTC 1 cut(s) 1548
EcoRII CCWGG 3 cut(s) 746, 943, 1019
EcoRV GATATC 2 cut(s) 1424, 2011
EcoT14I CCWWGG 3 cut(s) 111, 120, 465
EcoT22I ATGCAT 1 cut(s) 1512
ErhI CCWWGG 3 cut(s) 111, 120, 465
FalI AAGNNNNNCTT 6 cut(s) 1104, 1136, 1654, 1686, 1986, 2018
FaqI GGGAC 2 cut(s) 641, 1000
FauNDI CATATG 3 cut(s) 520, 778, 1480
FblI GTMKAC 3 cut(s) 767, 927, 1667
Fnu4HI GCNGC 4 cut(s) 242, 717, 852, 1872
FokI GGATG 5 cut(s) 17, 113, 329, 484, 587
Fsp4HI GCNGC 4 cut(s) 242, 717, 852, 1872
FspBI CTAG 8 cut(s) 216, 581, 653, 1190, 1266, 1337, 1740, 2054
GluI GCNGC 4 cut(s) 242, 717, 852, 1872
GsuI CTGGAG 2 cut(s) 168, 234
HaeIII GGCC 3 cut(s) 470, 815, 868
HapII CCGG 2 cut(s) 809, 1575
HgaI GACGC 1 cut(s) 513
HincII GTYRAC 3 cut(s) 431, 1312, 1346
HindII GTYRAC 3 cut(s) 431, 1312, 1346
HinfI GANTC 5 cut(s) 219, 254, 637, 1038, 1958
HpaII CCGG 2 cut(s) 809, 1575
HphI GGTGA 1 cut(s) 249
Hpy188I TCNGA 6 cut(s) 205, 373, 873, 1084, 1101, 1554
Hpy188III TCNNGA 9 cut(s) 216, 251, 323, 356, 794, 1183, 1394, 2014, 2031
HpyAV CCTTC 7 cut(s) 37, 291, 907, 910, 969, 1271, 1656
HpyCH4III ACNGT 5 cut(s) 829, 843, 1014, 1059, 1095
HpyCH4IV ACGT 1 cut(s) 1709
HpyF10VI GCNNNNNNNGC 3 cut(s) 812, 874, 1640
HpyF3I CTNAG 4 cut(s) 312, 372, 1553, 1758
HpySE526I ACGT 1 cut(s) 1709
LguI GCTCTTC 1 cut(s) 72
LmnI GCTCC 3 cut(s) 183, 312, 1366
Lsp1109I GCAGC 3 cut(s) 228, 728, 1883
LweI GCATC 2 cut(s) 565, 1621
MaeI CTAG 8 cut(s) 216, 581, 653, 1190, 1266, 1337, 1740, 2054
MaeII ACGT 1 cut(s) 1709
MaeIII GTNAC 7 cut(s) 7, 192, 1156, 1676, 1697, 1705, 1859
MboII GAAGA 9 cut(s) 44, 78, 89, 267, 623, 932, 1187, 1535, 2006
MflI RGATCY 5 cut(s) 454, 696, 934, 1225, 1742
MlsI TGGCCA 1 cut(s) 815
MluNI TGGCCA 1 cut(s) 815
MlyI GAGTC 2 cut(s) 646, 1967
MmeI TCCRAC 1 cut(s) 1935
Mox20I TGGCCA 1 cut(s) 815
Mph1103I ATGCAT 1 cut(s) 1512
MroXI GAANNNNTTC 1 cut(s) 1244
MscI TGGCCA 1 cut(s) 815
MseI TTAA 2 cut(s) 333, 1971
MslI CAYNNNNRTG 4 cut(s) 21, 1259, 1973, 1984
Msp20I TGGCCA 1 cut(s) 815
MspA1I CMGCKG 2 cut(s) 241, 719
MspI CCGG 2 cut(s) 809, 1575
MspR9I CCNGG 4 cut(s) 748, 945, 1021, 1575
MvaI CCWGG 3 cut(s) 748, 945, 1021
MvnI CGCG 1 cut(s) 1538
MwoI GCNNNNNNNGC 3 cut(s) 812, 874, 1640
NciI CCSGG 1 cut(s) 1575
NcoI CCATGG 1 cut(s) 120
NdeI CATATG 3 cut(s) 520, 778, 1480
NlaIV GGNNCC 2 cut(s) 117, 393
NmuCI GTSAC 3 cut(s) 1156, 1705, 1859
NsiI ATGCAT 1 cut(s) 1512
NspI RCATGY 8 cut(s) 496, 1344, 1514, 1534, 1844, 1922, 1978, 1985
NspV TTCGAA 1 cut(s) 415
OliI CACNNNNGTG 1 cut(s) 1984
PaeI GCATGC 2 cut(s) 1514, 1844
PagI TCATGA 1 cut(s) 355
PasI CCCWGGG 1 cut(s) 1020
PciI ACATGT 3 cut(s) 492, 1918, 1981
PciSI GCTCTTC 1 cut(s) 72
PdmI GAANNNNTTC 1 cut(s) 1244
PfeI GAWTC 3 cut(s) 219, 254, 1038
PflMI CCANNNNNTGG 1 cut(s) 1026
PinAI ACCGGT 1 cut(s) 808
PkrI GCNGC 4 cut(s) 243, 718, 853, 1873
PleI GAGTC 2 cut(s) 645, 1966
PmaCI CACGTG 1 cut(s) 1710
PmlI CACGTG 1 cut(s) 1710
PpsI GAGTC 2 cut(s) 645, 1966
Ppu21I YACGTR 1 cut(s) 1710
PscI ACATGT 3 cut(s) 492, 1918, 1981
PshBI ATTAAT 1 cut(s) 333
PsiI TTATAA 1 cut(s) 1068
Psp6I CCWGG 3 cut(s) 746, 943, 1019
PspCI CACGTG 1 cut(s) 1710
PspGI CCWGG 3 cut(s) 746, 943, 1019
PspN4I GGNNCC 2 cut(s) 117, 393
PsrI GAACNNNNNNTAC 2 cut(s) 12, 44
PstNI CAGNNNCTG 2 cut(s) 1757, 2030
PsuI RGATCY 5 cut(s) 454, 696, 934, 1225, 1742
PvuII CAGCTG 2 cut(s) 241, 719
RsaI GTAC 8 cut(s) 145, 570, 713, 727, 837, 1542, 1763, 1990
RsaNI GTAC 8 cut(s) 144, 569, 712, 726, 836, 1541, 1762, 1989
RseI CAYNNNNRTG 4 cut(s) 21, 1259, 1973, 1984
SapI GCTCTTC 1 cut(s) 72
SaqAI TTAA 2 cut(s) 333, 1971
SatI GCNGC 4 cut(s) 242, 717, 852, 1872
ScaI AGTACT 2 cut(s) 145, 837
SchI GAGTC 2 cut(s) 646, 1967
ScrFI CCNGG 4 cut(s) 748, 945, 1021, 1575
SfaNI GCATC 2 cut(s) 565, 1621
SfuI TTCGAA 1 cut(s) 415
SgrAI CRCCGGYG 1 cut(s) 808
SmiMI CAYNNNNRTG 4 cut(s) 21, 1259, 1973, 1984
SpeI ACTAGT 1 cut(s) 652
SphI GCATGC 2 cut(s) 1514, 1844
SsiI CCGC 2 cut(s) 851, 1538
SspMI CTAG 8 cut(s) 216, 581, 653, 1190, 1266, 1337, 1740, 2054
StyD4I CCNGG 4 cut(s) 746, 943, 1019, 1573
StyI CCWWGG 3 cut(s) 111, 120, 465
TaaI ACNGT 5 cut(s) 829, 843, 1014, 1059, 1095
TaiI ACGT 1 cut(s) 1712
TaqI TCGA 4 cut(s) 89, 415, 832, 1933
TatI WGTACW 5 cut(s) 143, 568, 835, 1761, 1988
TauI GCSGC 1 cut(s) 854
TfiI GAWTC 3 cut(s) 219, 254, 1038
Tru1I TTAA 2 cut(s) 333, 1971
Tru9I TTAA 2 cut(s) 333, 1971
TscAI CASTG 4 cut(s) 388, 1098, 1660, 1753
TseFI GTSAC 3 cut(s) 1156, 1705, 1859
TseI GCWGC 3 cut(s) 241, 716, 1871
Tsp45I GTSAC 3 cut(s) 1156, 1705, 1859
TspGWI ACGGA 1 cut(s) 404
TspRI CASTG 4 cut(s) 388, 1098, 1660, 1753
Van91I CCANNNNNTGG 1 cut(s) 1026
VspI ATTAAT 1 cut(s) 333
XapI RAATTY 4 cut(s) 350, 367, 1548, 1849
XbaI TCTAGA 1 cut(s) 215
XceI RCATGY 8 cut(s) 496, 1344, 1514, 1534, 1844, 1922, 1978, 1985
XmiI GTMKAC 3 cut(s) 767, 927, 1667
XmnI GAANNNNTTC 1 cut(s) 1244
XspI CTAG 8 cut(s) 216, 581, 653, 1190, 1266, 1337, 1740, 2054
ZrmI AGTACT 2 cut(s) 145, 837
Zsp2I ATGCAT 1 cut(s) 1512
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.