Reverse transcriptase (RNA-dependent DNA polymerase)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_2 | PF07727 | 2 - 84 | 1.4e-17 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 239 |
| AcsI | RAATTY | 3 cut(s) | 279, 524, 566 |
| AcuI | CTGAAG | 1 cut(s) | 314 |
| AdeI | CACNNNGTG | 1 cut(s) | 517 |
| AfaI | GTAC | 3 cut(s) | 194, 290, 577 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 311 |
| AflII | CTTAAG | 1 cut(s) | 188 |
| AgsI | TTSAA | 2 cut(s) | 565, 571 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 397 |
| AjnI | CCWGG | 2 cut(s) | 215, 304 |
| AluBI | AGCT | 3 cut(s) | 77, 151, 302 |
| AluI | AGCT | 3 cut(s) | 77, 151, 302 |
| Alw26I | GTCTC | 1 cut(s) | 139 |
| AlwI | GGATC | 1 cut(s) | 239 |
| AoxI | GGCC | 1 cut(s) | 489 |
| ApoI | RAATTY | 3 cut(s) | 279, 524, 566 |
| AsuHPI | GGTGA | 2 cut(s) | 100, 194 |
| AsuNHI | GCTAGC | 1 cut(s) | 151 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 31 |
| BbvCI | CCTCAGC | 1 cut(s) | 486 |
| BccI | CCATC | 1 cut(s) | 124 |
| BciT130I | CCWGG | 2 cut(s) | 217, 306 |
| BcoDI | GTCTC | 1 cut(s) | 139 |
| BfaI | CTAG | 2 cut(s) | 152, 480 |
| BfmI | CTRYAG | 1 cut(s) | 140 |
| BfrI | CTTAAG | 1 cut(s) | 188 |
| BmcAI | AGTACT | 2 cut(s) | 194, 577 |
| Bme1390I | CCNGG | 2 cut(s) | 217, 306 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 397 |
| BmrFI | CCNGG | 2 cut(s) | 217, 306 |
| BmsI | GCATC | 3 cut(s) | 64, 256, 355 |
| BmtI | GCTAGC | 1 cut(s) | 155 |
| BpmI | CTGGAG | 1 cut(s) | 288 |
| Bpu10I | CCTNAGC | 1 cut(s) | 486 |
| BpuEI | CTTGAG | 2 cut(s) | 35, 365 |
| BsaJI | CCNNGG | 1 cut(s) | 216 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 311 |
| Bse118I | RCCGGY | 1 cut(s) | 110 |
| Bse3DI | GCAATG | 1 cut(s) | 121 |
| BseBI | CCWGG | 2 cut(s) | 217, 306 |
| BseDI | CCNNGG | 1 cut(s) | 216 |
| BseGI | GGATG | 3 cut(s) | 100, 271, 339 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 311 |
| BseMI | GCAATG | 1 cut(s) | 121 |
| BseMII | CTCAG | 3 cut(s) | 45, 150, 477 |
| BshFI | GGCC | 1 cut(s) | 491 |
| BsiSI | CCGG | 1 cut(s) | 111 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 311 |
| BsmAI | GTCTC | 1 cut(s) | 139 |
| BsnI | GGCC | 1 cut(s) | 491 |
| Bsp143I | GATC | 4 cut(s) | 34, 231, 476, 553 |
| BspANI | GGCC | 1 cut(s) | 491 |
| BspCNI | CTCAG | 3 cut(s) | 44, 151, 478 |
| BspMAI | CTGCAG | 1 cut(s) | 144 |
| BspOI | GCTAGC | 1 cut(s) | 155 |
| BspPI | GGATC | 1 cut(s) | 239 |
| BspTI | CTTAAG | 1 cut(s) | 188 |
| BsrDI | GCAATG | 1 cut(s) | 121 |
| BsrFI | RCCGGY | 1 cut(s) | 110 |
| BssAI | RCCGGY | 1 cut(s) | 110 |
| BssECI | CCNNGG | 1 cut(s) | 216 |
| BssMI | GATC | 4 cut(s) | 34, 231, 476, 553 |
| Bst2UI | CCWGG | 2 cut(s) | 217, 306 |
| Bst4CI | ACNGT | 1 cut(s) | 124 |
| Bst6I | CTCTTC | 1 cut(s) | 443 |
| BstAFI | CTTAAG | 1 cut(s) | 188 |
| BstC8I | GCNNGC | 1 cut(s) | 153 |
| BstDEI | CTNAG | 5 cut(s) | 31, 159, 199, 486, 536 |
| BstF5I | GGATG | 3 cut(s) | 100, 271, 339 |
| BstKTI | GATC | 4 cut(s) | 37, 234, 479, 556 |
| BstMAI | GTCTC | 1 cut(s) | 139 |
| BstMBI | GATC | 4 cut(s) | 34, 231, 476, 553 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 148, 374 |
| BstNI | CCWGG | 2 cut(s) | 217, 306 |
| BstSCI | CCNGG | 2 cut(s) | 215, 304 |
| BstSFI | CTRYAG | 1 cut(s) | 140 |
| BstX2I | RGATCY | 1 cut(s) | 231 |
| BstYI | RGATCY | 1 cut(s) | 231 |
| BsuRI | GGCC | 1 cut(s) | 491 |
| BtsCI | GGATG | 3 cut(s) | 100, 271, 339 |
| Cac8I | GCNNGC | 1 cut(s) | 153 |
| Cfr10I | RCCGGY | 1 cut(s) | 110 |
| Csp6I | GTAC | 3 cut(s) | 193, 289, 576 |
| CviAII | CATG | 1 cut(s) | 444 |
| CviQI | GTAC | 3 cut(s) | 193, 289, 576 |
| DdeI | CTNAG | 5 cut(s) | 31, 159, 199, 486, 536 |
| DpnI | GATC | 4 cut(s) | 36, 233, 478, 555 |
| DpnII | GATC | 4 cut(s) | 34, 231, 476, 553 |
| DraI | TTTAAA | 1 cut(s) | 285 |
| DraIII | CACNNNGTG | 1 cut(s) | 517 |
| DriI | GACNNNNNGTC | 1 cut(s) | 397 |
| Eam1104I | CTCTTC | 1 cut(s) | 443 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 397 |
| EarI | CTCTTC | 1 cut(s) | 443 |
| Eco57I | CTGAAG | 1 cut(s) | 314 |
| EcoRII | CCWGG | 2 cut(s) | 215, 304 |
| FaeI | CATG | 1 cut(s) | 447 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 182, 214 |
| FatI | CATG | 1 cut(s) | 443 |
| FauNDI | CATATG | 1 cut(s) | 261 |
| FokI | GGATG | 3 cut(s) | 107, 278, 326 |
| FspBI | CTAG | 2 cut(s) | 152, 480 |
| GsuI | CTGGAG | 1 cut(s) | 288 |
| HaeIII | GGCC | 1 cut(s) | 491 |
| HapII | CCGG | 1 cut(s) | 111 |
| Hin1II | CATG | 1 cut(s) | 447 |
| HincII | GTYRAC | 1 cut(s) | 402 |
| HindII | GTYRAC | 1 cut(s) | 402 |
| HpaII | CCGG | 1 cut(s) | 111 |
| HphI | GGTGA | 2 cut(s) | 100, 194 |
| Hpy166II | GTNNAC | 2 cut(s) | 185, 402 |
| Hpy188I | TCNGA | 2 cut(s) | 34, 160 |
| Hpy8I | GTNNAC | 2 cut(s) | 185, 402 |
| HpyAV | CCTTC | 2 cut(s) | 221, 303 |
| HpyCH4III | ACNGT | 1 cut(s) | 124 |
| HpyCH4V | TGCA | 2 cut(s) | 142, 368 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 148, 374 |
| HpyF3I | CTNAG | 5 cut(s) | 31, 159, 199, 486, 536 |
| Hsp92II | CATG | 1 cut(s) | 447 |
| Kzo9I | GATC | 4 cut(s) | 34, 231, 476, 553 |
| LmnI | GCTCC | 1 cut(s) | 307 |
| LweI | GCATC | 3 cut(s) | 64, 256, 355 |
| MaeI | CTAG | 2 cut(s) | 152, 480 |
| MaeIII | GTNAC | 4 cut(s) | 14, 70, 410, 439 |
| MalI | GATC | 4 cut(s) | 36, 233, 478, 555 |
| MboI | GATC | 4 cut(s) | 34, 231, 476, 553 |
| MboII | GAAGA | 1 cut(s) | 460 |
| MflI | RGATCY | 1 cut(s) | 231 |
| MluCI | AATT | 6 cut(s) | 81, 204, 279, 433, 524, 566 |
| MnlI | CCTC | 9 cut(s) | 61, 166, 202, 240, 340, 390, 422, 481, 494 |
| MseI | TTAA | 2 cut(s) | 189, 284 |
| MslI | CAYNNNNRTG | 1 cut(s) | 264 |
| MspCI | CTTAAG | 1 cut(s) | 188 |
| MspI | CCGG | 1 cut(s) | 111 |
| MspR9I | CCNGG | 2 cut(s) | 217, 306 |
| MvaI | CCWGG | 2 cut(s) | 217, 306 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 148, 374 |
| NdeI | CATATG | 1 cut(s) | 261 |
| NdeII | GATC | 4 cut(s) | 34, 231, 476, 553 |
| NheI | GCTAGC | 1 cut(s) | 151 |
| NlaIII | CATG | 1 cut(s) | 447 |
| NmeAIII | GCCGAG | 1 cut(s) | 517 |
| PfoI | TCCNGGA | 1 cut(s) | 304 |
| Psp6I | CCWGG | 2 cut(s) | 215, 304 |
| PspGI | CCWGG | 2 cut(s) | 215, 304 |
| PstI | CTGCAG | 1 cut(s) | 144 |
| PsuI | RGATCY | 1 cut(s) | 231 |
| RsaI | GTAC | 3 cut(s) | 194, 290, 577 |
| RsaNI | GTAC | 3 cut(s) | 193, 289, 576 |
| RseI | CAYNNNNRTG | 1 cut(s) | 264 |
| SaqAI | TTAA | 2 cut(s) | 189, 284 |
| Sau3AI | GATC | 4 cut(s) | 34, 231, 476, 553 |
| ScaI | AGTACT | 2 cut(s) | 194, 577 |
| ScrFI | CCNGG | 2 cut(s) | 217, 306 |
| SfaNI | GCATC | 3 cut(s) | 64, 256, 355 |
| SfcI | CTRYAG | 1 cut(s) | 140 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 264 |
| SmlI | CTYRAG | 3 cut(s) | 50, 188, 344 |
| SmoI | CTYRAG | 3 cut(s) | 50, 188, 344 |
| Sse9I | AATT | 6 cut(s) | 81, 204, 279, 433, 524, 566 |
| SspI | AATATT | 1 cut(s) | 385 |
| SspMI | CTAG | 2 cut(s) | 152, 480 |
| StyD4I | CCNGG | 2 cut(s) | 215, 304 |
| TaaI | ACNGT | 1 cut(s) | 124 |
| TasI | AATT | 6 cut(s) | 81, 204, 279, 433, 524, 566 |
| TatI | WGTACW | 2 cut(s) | 192, 575 |
| Tru1I | TTAA | 2 cut(s) | 189, 284 |
| Tru9I | TTAA | 2 cut(s) | 189, 284 |
| TspDTI | ATGAA | 2 cut(s) | 185, 267 |
| TspGWI | ACGGA | 1 cut(s) | 528 |
| Vha464I | CTTAAG | 1 cut(s) | 188 |
| XapI | RAATTY | 3 cut(s) | 279, 524, 566 |
| XspI | CTAG | 2 cut(s) | 152, 480 |
| ZrmI | AGTACT | 2 cut(s) | 194, 577 |