FvH4_4g27901

beta-galactosidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000071
Physical Location & Seq
Reverse (-)
28691474 .. 28692900
1427 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g27901.t1

Sequence Viewer

Length: 1356 bp
ATGGCTCGGTCTCTTCTGCTAAGTGCTAATATGCCAAAGTATCTTTGGGGAGAAGCTGTTTTATGTGCTTCTCATCTTATTAACCGCCTTCCCTCTGCCCCTCTTCAAGGTCGTGTCCCACTTCAGGTCTTGTCTAACTATGTTTCTACCCCTTCAGCTAATACTCTTCCTACTCGTGTTTTTGGTTGTGTTGCTTATGTTCATCTCTATAAAAATCAAAGGTCAAAATTGGATGCTAGAGCCCTTAAGTGTGTATTTGTTGGGTATGGCTCTCAGCAGAAAGGCTACAAATTTTATCATCCTCAGTCCCAAAGGTTTTATGTCACCATGGATGTTACTTTCAGTGAAGATGTATGTTATTTCCTGCCTCCTGTGACTCCTCGTCAGGGGGAGAGGTTTAGTTATTATGAAGATTTGTTTGTTGGACATAATGAGAGTGTGACACCAGAAGTCACAAGGGTGGAGTGTGTAGCGACAGAGCTTGAAAAGAACGACAAAATTTCACCAAATGGTCAGCCCAACTCTACAGATCAGTCATCCGAGATAGAAACAGAAAAAAGTGGAATCAGTGACACACCAGATCAATCTGAGTGTCCGGTTAGAGAAGAATCTTTGGGCAGTGTTTTACCCAACGGTCAATTAGATCCAGAACAATCCGACCGATCGGCTAGGGAAGTGATTTCAGATCCTGAACCTGATGATGTGTTGCAGTCTTCTGGCGCTGTTTTAATGGCTCTTCTGTCTCTCCCTCTTCTTCATCGGTCTCACCTGCTGAATCATCACCCGAGTCGTTCAACCCGTGGTCAGCCTCCAAAACATTATGAACCTACTCTAAGTGCTAAGGCTAAATATCCAATCGTTAATTATGTGTCTACCCACAGGTTGTCTAAACCATATGTAGCCTTTGTGAATCAATTATCTTCTGTGTCTCTTCCTAGTAAAGTGCAGGATGCTATGAAGGATGAGAAGTGGATGCAGGCAATGAAAGTTGAGATGGATGCTCTTGAGAAGAATCATACGTGGGAGTTAGTGTCATTGCCACCAGGGAAGAAGACAGTTGGTTGTCGGTGGGTGTATACGATGAAACATAATTCTGATGGTTCTGTGGACAGGTACAAGGCAAGGTTAGTAGCAAAAGGCTATACTCAGAAGTATGGGGTAGATTATGATGAGACTTTTGCACCTGTGGCTAAAATGAACACAATTCGGGTACTTCTTTCATTAGCAGCTAACCTTGATTGGCAACTGCAGCAGTTTGATGTTAAAAATGTATTCTTGCATGGTGATTTGCATGAAGAAGTTTATATGGATTTGCCTCCTGGGTACGATACTTCTACCGGAGAACAGTTGGTGTAA

Protein Analysis

452

Amino Acids

50.74

Weight (kDa)

6.28

Isoelectric Point (pI)

48.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SH3_retrovirus PF25597 63 - 119 7e-23 Retroviral polymerase SH3-like domain
RVT_2 PF07727 338 - 445 3.7e-35 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000071)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G23160 AT4G23160
fragaria_vesca FvH4_2g08111 FvH4_2g17332 FvH4_2g18071 FvH4_2g20531 FvH4_2g20842 FvH4_2g20842 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g24231 FvH4_2g24232 FvH4_3g00831 FvH4_3g00831 FvH4_3g03561 FvH4_3g03561 FvH4_3g10282 FvH4_3g18165 FvH4_3g19021 FvH4_3g24071 FvH4_3g33123 FvH4_3g33970 FvH4_3g38851 FvH4_3g39133 FvH4_3g39271 FvH4_4g00981 FvH4_4g08191 FvH4_4g08311 FvH4_4g08311 FvH4_4g08311 FvH4_4g09341 FvH4_4g12550 FvH4_4g12550 FvH4_4g12550 FvH4_4g13391 FvH4_4g14842 FvH4_4g27901 FvH4_5g11561 FvH4_5g15611 FvH4_5g17991 FvH4_5g27871 FvH4_5g29995 FvH4_5g39662 FvH4_6g02392 FvH4_6g12781 FvH4_6g20106 FvH4_6g20106 FvH4_6g20106 FvH4_6g30872 FvH4_6g34901 FvH4_6g35632 FvH4_6g36661 FvH4_6g43795 FvH4_6g44611 FvH4_7g01791 FvH4_7g04041 FvH4_7g12551 FvH4_7g23351
malus_domestica MD00G1134200.v1.1 MD01G1096500.v1.1 MD01G1128200.v1.1 MD02G1250500.v1.1 MD02G1294900.v1.1 MD03G1121800.v1.1 MD04G1021400.v1.1 MD04G1051100.v1.1 MD04G1051300.v1.1 MD04G1099000.v1.1 MD05G1047900.v1.1 MD05G1298000.v1.1 MD06G1064200.v1.1 MD06G1120600.v1.1 MD07G1013900.v1.1 MD09G1226900.v1.1 MD10G1196700.v1.1 MD10G1307000.v1.1 MD10G1338900.v1.1 MD11G1107300.v1.1 MD11G1138300.v1.1 MD11G1236700.v1.1 MD12G1032500.v1.1 MD12G1150100.v1.1 MD12G1247800.v1.1 MD17G1267900.v1.1
pyrus_communis pycom02g03660 pycom02g13370 pycom02g14840 pycom02g18400 pycom02g18880 pycom02g22740 pycom04g08800 pycom04g15770 pycom05g07980 pycom05g19640 pycom06g09360 pycom07g13160 pycom08g11820 pycom08g21740 pycom09g19980 pycom10g04810 pycom10g05420 pycom10g14650 pycom11g03140 pycom11g21550 pycom12g14740 pycom13g01600 pycom13g29510 pycom14g07060 pycom15g01990 pycom15g19850 pycom15g30860 pycom16g15290 pycom16g16250 pycom16g25390 pycom17g17270 pycom520g00070
rosa_chinensis RchiOBHm_Chr1g0316691 RchiOBHm_Chr1g0320751 RchiOBHm_Chr1g0320771 RchiOBHm_Chr1g0322231 RchiOBHm_Chr1g0322861 RchiOBHm_Chr1g0328471 RchiOBHm_Chr1g0333321 RchiOBHm_Chr1g0337871 RchiOBHm_Chr1g0339051 RchiOBHm_Chr1g0349861 RchiOBHm_Chr1g0361951 RchiOBHm_Chr1g0365931 RchiOBHm_Chr1g0365981 RchiOBHm_Chr1g0377711 RchiOBHm_Chr1g0381581 RchiOBHm_Chr1g0382741 RchiOBHm_Chr1g0383501 RchiOBHm_Chr2g0101201 RchiOBHm_Chr2g0113601 RchiOBHm_Chr2g0124031 RchiOBHm_Chr2g0135481 RchiOBHm_Chr2g0148361 RchiOBHm_Chr2g0150101 RchiOBHm_Chr2g0154181 RchiOBHm_Chr2g0156071 RchiOBHm_Chr2g0166521 RchiOBHm_Chr2g0166821 RchiOBHm_Chr3g0448011 RchiOBHm_Chr3g0450941 RchiOBHm_Chr3g0450961 RchiOBHm_Chr3g0451051 RchiOBHm_Chr3g0451721 RchiOBHm_Chr3g0453371 RchiOBHm_Chr3g0454881 RchiOBHm_Chr3g0457421 RchiOBHm_Chr3g0457661 RchiOBHm_Chr3g0460011 RchiOBHm_Chr3g0461531 RchiOBHm_Chr3g0461981 RchiOBHm_Chr3g0463471 RchiOBHm_Chr3g0466641 RchiOBHm_Chr3g0468181 RchiOBHm_Chr3g0483351 RchiOBHm_Chr4g0394001 RchiOBHm_Chr4g0397261 RchiOBHm_Chr4g0404531 RchiOBHm_Chr4g0410841 RchiOBHm_Chr4g0415501 RchiOBHm_Chr4g0425221 RchiOBHm_Chr4g0430811 RchiOBHm_Chr5g0010831 RchiOBHm_Chr5g0016831 RchiOBHm_Chr5g0016851 RchiOBHm_Chr5g0031351 RchiOBHm_Chr5g0032151 RchiOBHm_Chr5g0041201 RchiOBHm_Chr5g0042191 RchiOBHm_Chr5g0064121 RchiOBHm_Chr5g0066601 RchiOBHm_Chr5g0078371 RchiOBHm_Chr5g0079271 RchiOBHm_Chr6g0263751 RchiOBHm_Chr6g0285111 RchiOBHm_Chr6g0298961 RchiOBHm_Chr6g0300481 RchiOBHm_Chr6g0303211 RchiOBHm_Chr7g0192341 RchiOBHm_Chr7g0196171 RchiOBHm_Chr7g0200281 RchiOBHm_Chr7g0200551 RchiOBHm_Chr7g0207611 RchiOBHm_Chr7g0212421 RchiOBHm_Chr7g0214991 RchiOBHm_Chr7g0219211 RchiOBHm_Chr7g0242371
rosa_laevigata RLG00000002389 RLG00000007980
rosa_roxburghii Rroxscaffold_1G00053480 Rroxscaffold_2G00090890 Rroxscaffold_2G00099660 Rroxscaffold_2G00134510 Rroxscaffold_3G00221450 Rroxscaffold_3G00240550 Rroxscaffold_4G00305710 Rroxscaffold_4G00306360 Rroxscaffold_4G00306800 Rroxscaffold_4G00329090 Rroxscaffold_5G00382750 Rroxscaffold_5G00385900 Rroxscaffold_6G00403080 Rroxscaffold_7G00172890 Rroxscaffold_7G00186690
rosa_samantha Rh1DG425600
rosa_wichuraiana Rw0G001640 Rw0G009160 Rw0G010480 Rw0G010520 Rw0G013850 Rw0G017170 Rw0G018520 Rw0G019280 Rw0G022780 Rw1G000360 Rw1G001410 Rw1G001630 Rw1G002100 Rw1G006810 Rw1G010680 Rw1G012700 Rw1G016160 Rw1G022180 Rw1G023580 Rw1G025640 Rw1G026310 Rw1G027230 Rw1G028110 Rw1G034180 Rw2G004990 Rw2G005840 Rw2G007350 Rw2G024730 Rw2G025580 Rw2G026670 Rw2G027210 Rw2G029060 Rw2G031560 Rw2G042190 Rw2G043850 Rw2G045990 Rw2G046130 Rw2G049290 Rw2G049310 Rw2G049790 Rw2G052250 Rw3G004350 Rw3G013100 Rw3G015280 Rw3G015720 Rw3G024630 Rw3G026470 Rw3G027840 Rw3G028960 Rw3G029130 Rw3G029160 Rw4G000280 Rw4G006650 Rw4G008970 Rw4G009310 Rw4G011730 Rw4G012000 Rw4G012610 Rw4G014300 Rw4G014690 Rw4G015190 Rw4G016470 Rw4G020750 Rw4G025060 Rw4G025080 Rw5G005610 Rw5G010380 Rw5G013970 Rw5G015130 Rw5G015250 Rw5G017640 Rw5G019910 Rw5G022410 Rw5G023550 Rw5G029710 Rw5G037650 Rw5G038280 Rw5G038570 Rw5G041550 Rw5G042600 Rw5G043910 Rw5G047850 Rw5G048200 Rw5G049920 Rw6G000260 Rw6G000530 Rw6G001710 Rw6G005090 Rw6G006730 Rw6G009310 Rw6G010950 Rw6G011630 Rw6G012080 Rw6G012750 Rw6G015970 Rw6G020700 Rw6G024350 Rw7G008540 Rw7G016620 Rw7G019400 Rw7G020010 Rw7G024240 Rw7G025630 Rw7G027550 Rw7G027770 Rw7G027960 Rw7G028450 Rw7G031280 Rw7G031970 Rw7G032180 Rw7G033590 Rw7G033720 Rw7G033890 Rw7G041800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 777
Acc36I ACCTGC 1 cut(s) 777
AccI GTMKAC 2 cut(s) 872, 1076
AciI CCGC 1 cut(s) 85
AclWI GGATC 2 cut(s) 638, 680
AcsI RAATTY 2 cut(s) 290, 498
AcuI CTGAAG 2 cut(s) 107, 138
AfaI GTAC 3 cut(s) 1115, 1212, 1325
AfiI CCNNNNNNNGG 3 cut(s) 107, 124, 386
AflII CTTAAG 1 cut(s) 245
AgsI TTSAA 3 cut(s) 107, 485, 795
AhdI GACNNNNNGTC 1 cut(s) 381
AjnI CCWGG 2 cut(s) 1042, 1318
AleI CACNNNNGTG 1 cut(s) 458
AluBI AGCT 4 cut(s) 56, 158, 481, 1229
AluI AGCT 4 cut(s) 56, 158, 481, 1229
Alw26I GTCTC 5 cut(s) 15, 747, 768, 933, 1166
AlwI GGATC 2 cut(s) 638, 680
AlwNI CAGNNNCTG 1 cut(s) 689
Ama87I CYCGRG 1 cut(s) 784
ApeKI GCWGC 2 cut(s) 1226, 1249
ApoI RAATTY 2 cut(s) 290, 498
AspLEI GCGC 1 cut(s) 722
AsuHPI GGTGA 5 cut(s) 316, 495, 758, 773, 1295
AvaI CYCGRG 1 cut(s) 784
BanII GRGCYC 1 cut(s) 244
BauI CACGAG 1 cut(s) 174
BbsI GAAGAC 2 cut(s) 705, 1058
BbvI GCAGC 2 cut(s) 1238, 1261
BccI CCATC 2 cut(s) 988, 1091
BciT130I CCWGG 2 cut(s) 1044, 1320
BcoDI GTCTC 5 cut(s) 15, 747, 768, 933, 1166
BfaI CTAG 3 cut(s) 237, 669, 936
BfmI CTRYAG 2 cut(s) 525, 1247
BfoI RGCGCY 1 cut(s) 723
BfrI CTTAAG 1 cut(s) 245
BfuAI ACCTGC 1 cut(s) 777
BisI GCNGC 2 cut(s) 1227, 1250
BlsI GCNGC 2 cut(s) 1228, 1251
Bme1390I CCNGG 2 cut(s) 1044, 1320
BmeRI GACNNNNNGTC 1 cut(s) 381
BmeT110I CYCGRG 1 cut(s) 784
BmrFI CCNGG 2 cut(s) 1044, 1320
BmsI GCATC 4 cut(s) 223, 940, 963, 988
BpiI GAAGAC 2 cut(s) 705, 1058
Bpu10I CCTNAGC 1 cut(s) 840
BpuEI CTTGAG 1 cut(s) 1025
BsaAI YACGTR 1 cut(s) 1020
BsaI GGTCTC 2 cut(s) 15, 768
BsaJI CCNNGG 4 cut(s) 327, 799, 1043, 1319
BsaWI WCCGGW 2 cut(s) 595, 1337
BsaXI ACNNNNNCTCC 4 cut(s) 42, 72, 1016, 1046
Bsc4I CCNNNNNNNGG 3 cut(s) 107, 124, 386
Bse3DI GCAATG 2 cut(s) 987, 1034
BseBI CCWGG 2 cut(s) 1044, 1320
BseDI CCNNGG 4 cut(s) 327, 799, 1043, 1319
BseGI GGATG 8 cut(s) 238, 298, 337, 536, 955, 967, 978, 1003
BseLI CCNNNNNNNGG 3 cut(s) 107, 124, 386
BseMI GCAATG 2 cut(s) 987, 1034
BseMII CTCAG 4 cut(s) 287, 317, 579, 1160
BseRI GAGGAG 1 cut(s) 369
BseXI GCAGC 2 cut(s) 1238, 1261
BsgI GTGCAG 1 cut(s) 965
Bsh1285I CGRYCG 2 cut(s) 661, 665
BsiEI CGRYCG 2 cut(s) 661, 665
BsiHKCI CYCGRG 1 cut(s) 784
BsiSI CCGG 2 cut(s) 596, 1338
BslFI GGGAC 2 cut(s) 101, 292
BslI CCNNNNNNNGG 3 cut(s) 107, 124, 386
BsmAI GTCTC 5 cut(s) 15, 747, 768, 933, 1166
BsmFI GGGAC 2 cut(s) 101, 292
Bso31I GGTCTC 2 cut(s) 15, 768
BsoBI CYCGRG 1 cut(s) 784
Bsp1286I GDGCHC 1 cut(s) 244
Bsp143I GATC 5 cut(s) 529, 580, 643, 662, 685
Bsp19I CCATGG 1 cut(s) 327
BspACI CCGC 1 cut(s) 85
BspCNI CTCAG 4 cut(s) 286, 316, 580, 1159
BspMAI CTGCAG 1 cut(s) 1251
BspMI ACCTGC 1 cut(s) 777
BspPI GGATC 2 cut(s) 638, 680
BspQI GCTCTTC 1 cut(s) 741
BspTI CTTAAG 1 cut(s) 245
BspTNI GGTCTC 2 cut(s) 15, 768
BsrDI GCAATG 2 cut(s) 987, 1034
BssECI CCNNGG 4 cut(s) 327, 799, 1043, 1319
BssMI GATC 5 cut(s) 529, 580, 643, 662, 685
BssNAI GTATAC 1 cut(s) 1077
BssSI CACGAG 1 cut(s) 174
BssT1I CCWWGG 1 cut(s) 327
Bst1107I GTATAC 1 cut(s) 1077
Bst2BI CACGAG 1 cut(s) 174
Bst2UI CCWGG 2 cut(s) 1044, 1320
Bst4CI ACNGT 3 cut(s) 635, 1057, 1347
Bst6I CTCTTC 6 cut(s) 18, 108, 171, 741, 756, 936
BstAFI CTTAAG 1 cut(s) 245
BstBAI YACGTR 1 cut(s) 1020
BstC8I GCNNGC 1 cut(s) 978
BstDEI CTNAG 7 cut(s) 20, 273, 303, 588, 833, 840, 1146
BstDSI CCRYGG 2 cut(s) 327, 799
BstENI CCTNNNNNAGG 1 cut(s) 105
BstF5I GGATG 8 cut(s) 238, 298, 337, 536, 955, 967, 978, 1003
BstH2I RGCGCY 1 cut(s) 723
BstHHI GCGC 1 cut(s) 722
BstKTI GATC 5 cut(s) 532, 583, 646, 665, 688
BstMAI GTCTC 5 cut(s) 15, 747, 768, 933, 1166
BstMBI GATC 5 cut(s) 529, 580, 643, 662, 685
BstMCI CGRYCG 2 cut(s) 661, 665
BstMWI GCNNNNNNNGC 2 cut(s) 1187, 1249
BstNI CCWGG 2 cut(s) 1044, 1320
BstSCI CCNGG 2 cut(s) 1042, 1318
BstSFI CTRYAG 2 cut(s) 525, 1247
BstV1I GCAGC 2 cut(s) 1238, 1261
BstV2I GAAGAC 2 cut(s) 705, 1058
BstX2I RGATCY 2 cut(s) 643, 685
BstYI RGATCY 2 cut(s) 643, 685
BstZ17I GTATAC 1 cut(s) 1077
BtgI CCRYGG 2 cut(s) 327, 799
BtsCI GGATG 8 cut(s) 238, 298, 337, 536, 955, 967, 978, 1003
BtsI GCAGTG 1 cut(s) 625
BtsIMutI CAGTG 3 cut(s) 349, 574, 625
BveI ACCTGC 1 cut(s) 777
Cac8I GCNNGC 1 cut(s) 978
CaiI CAGNNNCTG 1 cut(s) 689
CfoI GCGC 1 cut(s) 722
Csp6I GTAC 3 cut(s) 1114, 1211, 1324
CviAII CATG 3 cut(s) 328, 1280, 1292
CviQI GTAC 3 cut(s) 1114, 1211, 1324
DdeI CTNAG 7 cut(s) 20, 273, 303, 588, 833, 840, 1146
DpnI GATC 5 cut(s) 531, 582, 645, 664, 687
DpnII GATC 5 cut(s) 529, 580, 643, 662, 685
DriI GACNNNNNGTC 1 cut(s) 381
Eam1104I CTCTTC 6 cut(s) 18, 108, 171, 741, 756, 936
Eam1105I GACNNNNNGTC 1 cut(s) 381
EarI CTCTTC 6 cut(s) 18, 108, 171, 741, 756, 936
Eco130I CCWWGG 1 cut(s) 327
Eco24I GRGCYC 1 cut(s) 244
Eco31I GGTCTC 2 cut(s) 15, 768
Eco57I CTGAAG 2 cut(s) 107, 138
Eco88I CYCGRG 1 cut(s) 784
EcoNI CCTNNNNNAGG 1 cut(s) 105
EcoRII CCWGG 2 cut(s) 1042, 1318
EcoT14I CCWWGG 1 cut(s) 327
EcoT38I GRGCYC 1 cut(s) 244
ErhI CCWWGG 1 cut(s) 327
FaeI CATG 3 cut(s) 331, 1283, 1295
FaqI GGGAC 2 cut(s) 101, 292
FatI CATG 3 cut(s) 327, 1279, 1291
FauNDI CATATG 1 cut(s) 895
FblI GTMKAC 2 cut(s) 872, 1076
Fnu4HI GCNGC 2 cut(s) 1227, 1250
FokI GGATG 8 cut(s) 245, 285, 344, 523, 962, 974, 985, 1010
FriOI GRGCYC 1 cut(s) 244
Fsp4HI GCNGC 2 cut(s) 1227, 1250
FspBI CTAG 3 cut(s) 237, 669, 936
GlaI GCGC 1 cut(s) 721
GluI GCNGC 2 cut(s) 1227, 1250
HaeII RGCGCY 1 cut(s) 723
HapII CCGG 2 cut(s) 596, 1338
HhaI GCGC 1 cut(s) 722
Hin1II CATG 3 cut(s) 331, 1283, 1295
Hin6I GCGC 1 cut(s) 720
HinP1I GCGC 1 cut(s) 720
HinfI GANTC 7 cut(s) 376, 564, 608, 775, 787, 910, 1012
HpaII CCGG 2 cut(s) 596, 1338
HphI GGTGA 5 cut(s) 316, 495, 758, 773, 1295
Hpy166II GTNNAC 3 cut(s) 873, 1077, 1108
Hpy188I TCNGA 6 cut(s) 541, 589, 658, 685, 1096, 1149
Hpy188III TCNNGA 3 cut(s) 647, 689, 1004
Hpy8I GTNNAC 3 cut(s) 873, 1077, 1108
HpyAV CCTTC 3 cut(s) 98, 162, 952
HpyCH4III ACNGT 3 cut(s) 635, 1057, 1347
HpyCH4IV ACGT 1 cut(s) 1019
HpyCH4V TGCA 7 cut(s) 709, 946, 976, 1181, 1249, 1279, 1291
HpyF10VI GCNNNNNNNGC 2 cut(s) 1187, 1249
HpyF3I CTNAG 7 cut(s) 20, 273, 303, 588, 833, 840, 1146
HpySE526I ACGT 1 cut(s) 1019
Hsp92II CATG 3 cut(s) 331, 1283, 1295
HspAI GCGC 1 cut(s) 720
Kzo9I GATC 5 cut(s) 529, 580, 643, 662, 685
LguI GCTCTTC 1 cut(s) 741
Lsp1109I GCAGC 2 cut(s) 1238, 1261
LweI GCATC 4 cut(s) 223, 940, 963, 988
MaeI CTAG 3 cut(s) 237, 669, 936
MaeII ACGT 1 cut(s) 1019
MaeIII GTNAC 6 cut(s) 322, 334, 373, 439, 451, 569
MalI GATC 5 cut(s) 531, 582, 645, 664, 687
MboI GATC 5 cut(s) 529, 580, 643, 662, 685
MflI RGATCY 2 cut(s) 643, 685
MhlI GDGCHC 1 cut(s) 244
MluCI AATT 8 cut(s) 227, 290, 498, 638, 862, 914, 1090, 1203
MlyI GAGTC 2 cut(s) 370, 796
MmeI TCCRAC 2 cut(s) 403, 681
MnlI CCTC 9 cut(s) 103, 111, 312, 378, 387, 390, 759, 819, 1326
MseI TTAA 5 cut(s) 81, 246, 728, 861, 1263
MslI CAYNNNNRTG 1 cut(s) 458
MspCI CTTAAG 1 cut(s) 245
MspI CCGG 2 cut(s) 596, 1338
MspR9I CCNGG 2 cut(s) 1044, 1320
MvaI CCWGG 2 cut(s) 1044, 1320
MwoI GCNNNNNNNGC 2 cut(s) 1187, 1249
NcoI CCATGG 1 cut(s) 327
NdeI CATATG 1 cut(s) 895
NdeII GATC 5 cut(s) 529, 580, 643, 662, 685
NlaIII CATG 3 cut(s) 331, 1283, 1295
NmuCI GTSAC 5 cut(s) 322, 373, 439, 451, 569
OliI CACNNNNGTG 1 cut(s) 458
PaqCI CACCTGC 1 cut(s) 777
PciSI GCTCTTC 1 cut(s) 741
PcsI WCGNNNNNNNCGW 1 cut(s) 796
PfeI GAWTC 5 cut(s) 564, 608, 775, 910, 1012
PkrI GCNGC 2 cut(s) 1228, 1251
Ple19I CGATCG 1 cut(s) 665
PleI GAGTC 2 cut(s) 370, 795
PpsI GAGTC 2 cut(s) 370, 795
Ppu21I YACGTR 1 cut(s) 1020
Psp6I CCWGG 2 cut(s) 1042, 1318
PspGI CCWGG 2 cut(s) 1042, 1318
PstI CTGCAG 1 cut(s) 1251
PstNI CAGNNNCTG 1 cut(s) 689
PsuI RGATCY 2 cut(s) 643, 685
PvuI CGATCG 1 cut(s) 665
RsaI GTAC 3 cut(s) 1115, 1212, 1325
RsaNI GTAC 3 cut(s) 1114, 1211, 1324
RseI CAYNNNNRTG 1 cut(s) 458
SapI GCTCTTC 1 cut(s) 741
SaqAI TTAA 5 cut(s) 81, 246, 728, 861, 1263
SatI GCNGC 2 cut(s) 1227, 1250
Sau3AI GATC 5 cut(s) 529, 580, 643, 662, 685
SchI GAGTC 2 cut(s) 370, 796
ScrFI CCNGG 2 cut(s) 1044, 1320
SduI GDGCHC 1 cut(s) 244
SfaNI GCATC 4 cut(s) 223, 940, 963, 988
SfcI CTRYAG 2 cut(s) 525, 1247
SmiMI CAYNNNNRTG 1 cut(s) 458
SmlI CTYRAG 2 cut(s) 245, 1004
SmoI CTYRAG 2 cut(s) 245, 1004
Sse9I AATT 8 cut(s) 227, 290, 498, 638, 862, 914, 1090, 1203
SsiI CCGC 1 cut(s) 85
SspMI CTAG 3 cut(s) 237, 669, 936
StyD4I CCNGG 2 cut(s) 1042, 1318
StyI CCWWGG 1 cut(s) 327
TaaI ACNGT 3 cut(s) 635, 1057, 1347
TaiI ACGT 1 cut(s) 1022
TaqII GACCGA 2 cut(s) 675, 750
TasI AATT 8 cut(s) 227, 290, 498, 638, 862, 914, 1090, 1203
TfiI GAWTC 5 cut(s) 564, 608, 775, 910, 1012
Tru1I TTAA 5 cut(s) 81, 246, 728, 861, 1263
Tru9I TTAA 5 cut(s) 81, 246, 728, 861, 1263
TscAI CASTG 3 cut(s) 349, 574, 625
TseFI GTSAC 5 cut(s) 322, 373, 439, 451, 569
TseI GCWGC 2 cut(s) 1226, 1249
Tsp45I GTSAC 5 cut(s) 322, 373, 439, 451, 569
TspRI CASTG 3 cut(s) 349, 574, 625
Vha464I CTTAAG 1 cut(s) 245
XagI CCTNNNNNAGG 1 cut(s) 105
XapI RAATTY 2 cut(s) 290, 498
XcmI CCANNNNNNNNNTGG 1 cut(s) 42
XmiI GTMKAC 2 cut(s) 872, 1076
XspI CTAG 3 cut(s) 237, 669, 936
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.