Rw1G012700

mitochondrial protein AtMg00810-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000071
Physical Location & Seq
Forward (+)
28169713 .. 28170984
1272 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G012700.1

Sequence Viewer

Length: 1185 bp
ATGAACACAGTTCGAGTTTTGTTATCTGTTGCTGTGAATTGTGGATGGTCTCTATGCCAAATGGATGTCAAGAATGCCTTTTTGCATGGGGATCTAGAAGAAGATGTGTATATGAGATTACCTCCTGGACATCCACGTGAAATTCTTCTTGCCTCAAGCTTCAAGAGAAGTCATGCAGACTCCCCCCTGTTTATTCAAAATGGCACGGCTGGCAAATTGGTGGTTCTAGTGTATGTGGATGACTTAATCATCACTGGAGATAATATGGAAGAGATTAAGTCTCTCAAGTCAGCCTTACACAATACCTTTGCTATCAAAGATCTTGGTCCATTGAAGTACTTCCTTGGAATTGAAATGGATCACTCCTCAAATGGTATGTTCTTAAATCAACGCAAATATGTTGTTGATCTTCTTGACGAGGCAGGAATGAAGGATAGTAAGCCTGCATGTACTCCTCTTAGTAGCAGACTTAAAACAGATGTTAAAGGAGAACCTCTCTCAGATATTTGTGTTTATCAACGCCTTGTGGGTAAGCTTATCTATCTCACCATTACAAGACCAGACCTCACTTATGCTGTGAGTTTGGTCAGTCAATTCATGCACTCCCCTACCACTCATCATCTACAGATTCTCAAAAGAATTCTTCGCTACGTAAAGGGCACAGTTGATCAAGGAATTGTTATGAAGAACAATGGTCACTTCAACCTTGTGGGCTACTCAGACTCTGACTGGGCAGGAAATGCCATTGATCGAAAGTCCACAACTGGGTACTGCACTTTCATTGGAGGTAACCTAGTTACTTGGAAGAGCAAGAAACAAACAGTGGTTGCTCGTTCTAGTGCCGAAGCTGAGTATCGTGCAATGGCATCCACAGCTTGTGAACTCATATGGTTAAAGACATTGTTGGGTGACTTAGGCATTGTGTGCACTACGCCCATATCTCTACATTGTGACAACCAGGCTGCCATGCATATCGCAGGAAATCCAGTCTTCCATGAGCGCACCAAACATATTGAAGTAGATTGCCACTTTGTTCGTGATCAGGTTCAGTCTAAACTTATTGAAACAGTGTACACACGATCATGTGATCAACTGGCAGACATTTTTACTAAGATTCTCGCTTCCGCTCAGTTTGAACTTTTGCTTTCCAAGCTTGGCTCAAGGTACTCCCTTGATCCAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2

Protein Analysis

394

Amino Acids

43.89

Weight (kDa)

7.61

Isoelectric Point (pI)

36.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_2 PF07727 2 - 44 2.2e-09 Reverse transcriptase (RNA-dependent DNA polymerase)
RVT_2 PF07727 48 - 153 9.6e-23 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000071)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G23160 AT4G23160
fragaria_vesca FvH4_2g08111 FvH4_2g17332 FvH4_2g18071 FvH4_2g20531 FvH4_2g20842 FvH4_2g20842 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g24231 FvH4_2g24232 FvH4_3g00831 FvH4_3g00831 FvH4_3g03561 FvH4_3g03561 FvH4_3g10282 FvH4_3g18165 FvH4_3g19021 FvH4_3g24071 FvH4_3g33123 FvH4_3g33970 FvH4_3g38851 FvH4_3g39133 FvH4_3g39271 FvH4_4g00981 FvH4_4g08191 FvH4_4g08311 FvH4_4g08311 FvH4_4g08311 FvH4_4g09341 FvH4_4g12550 FvH4_4g12550 FvH4_4g12550 FvH4_4g13391 FvH4_4g14842 FvH4_4g27901 FvH4_5g11561 FvH4_5g15611 FvH4_5g17991 FvH4_5g27871 FvH4_5g29995 FvH4_5g39662 FvH4_6g02392 FvH4_6g12781 FvH4_6g20106 FvH4_6g20106 FvH4_6g20106 FvH4_6g30872 FvH4_6g34901 FvH4_6g35632 FvH4_6g36661 FvH4_6g43795 FvH4_6g44611 FvH4_7g01791 FvH4_7g04041 FvH4_7g12551 FvH4_7g23351
malus_domestica MD00G1134200.v1.1 MD01G1096500.v1.1 MD01G1128200.v1.1 MD02G1250500.v1.1 MD02G1294900.v1.1 MD03G1121800.v1.1 MD04G1021400.v1.1 MD04G1051100.v1.1 MD04G1051300.v1.1 MD04G1099000.v1.1 MD05G1047900.v1.1 MD05G1298000.v1.1 MD06G1064200.v1.1 MD06G1120600.v1.1 MD07G1013900.v1.1 MD09G1226900.v1.1 MD10G1196700.v1.1 MD10G1307000.v1.1 MD10G1338900.v1.1 MD11G1107300.v1.1 MD11G1138300.v1.1 MD11G1236700.v1.1 MD12G1032500.v1.1 MD12G1150100.v1.1 MD12G1247800.v1.1 MD17G1267900.v1.1
pyrus_communis pycom02g03660 pycom02g13370 pycom02g14840 pycom02g18400 pycom02g18880 pycom02g22740 pycom04g08800 pycom04g15770 pycom05g07980 pycom05g19640 pycom06g09360 pycom07g13160 pycom08g11820 pycom08g21740 pycom09g19980 pycom10g04810 pycom10g05420 pycom10g14650 pycom11g03140 pycom11g21550 pycom12g14740 pycom13g01600 pycom13g29510 pycom14g07060 pycom15g01990 pycom15g19850 pycom15g30860 pycom16g15290 pycom16g16250 pycom16g25390 pycom17g17270 pycom520g00070
rosa_chinensis RchiOBHm_Chr1g0316691 RchiOBHm_Chr1g0320751 RchiOBHm_Chr1g0320771 RchiOBHm_Chr1g0322231 RchiOBHm_Chr1g0322861 RchiOBHm_Chr1g0328471 RchiOBHm_Chr1g0333321 RchiOBHm_Chr1g0337871 RchiOBHm_Chr1g0339051 RchiOBHm_Chr1g0349861 RchiOBHm_Chr1g0361951 RchiOBHm_Chr1g0365931 RchiOBHm_Chr1g0365981 RchiOBHm_Chr1g0377711 RchiOBHm_Chr1g0381581 RchiOBHm_Chr1g0382741 RchiOBHm_Chr1g0383501 RchiOBHm_Chr2g0101201 RchiOBHm_Chr2g0113601 RchiOBHm_Chr2g0124031 RchiOBHm_Chr2g0135481 RchiOBHm_Chr2g0148361 RchiOBHm_Chr2g0150101 RchiOBHm_Chr2g0154181 RchiOBHm_Chr2g0156071 RchiOBHm_Chr2g0166521 RchiOBHm_Chr2g0166821 RchiOBHm_Chr3g0448011 RchiOBHm_Chr3g0450941 RchiOBHm_Chr3g0450961 RchiOBHm_Chr3g0451051 RchiOBHm_Chr3g0451721 RchiOBHm_Chr3g0453371 RchiOBHm_Chr3g0454881 RchiOBHm_Chr3g0457421 RchiOBHm_Chr3g0457661 RchiOBHm_Chr3g0460011 RchiOBHm_Chr3g0461531 RchiOBHm_Chr3g0461981 RchiOBHm_Chr3g0463471 RchiOBHm_Chr3g0466641 RchiOBHm_Chr3g0468181 RchiOBHm_Chr3g0483351 RchiOBHm_Chr4g0394001 RchiOBHm_Chr4g0397261 RchiOBHm_Chr4g0404531 RchiOBHm_Chr4g0410841 RchiOBHm_Chr4g0415501 RchiOBHm_Chr4g0425221 RchiOBHm_Chr4g0430811 RchiOBHm_Chr5g0010831 RchiOBHm_Chr5g0016831 RchiOBHm_Chr5g0016851 RchiOBHm_Chr5g0031351 RchiOBHm_Chr5g0032151 RchiOBHm_Chr5g0041201 RchiOBHm_Chr5g0042191 RchiOBHm_Chr5g0064121 RchiOBHm_Chr5g0066601 RchiOBHm_Chr5g0078371 RchiOBHm_Chr5g0079271 RchiOBHm_Chr6g0263751 RchiOBHm_Chr6g0285111 RchiOBHm_Chr6g0298961 RchiOBHm_Chr6g0300481 RchiOBHm_Chr6g0303211 RchiOBHm_Chr7g0192341 RchiOBHm_Chr7g0196171 RchiOBHm_Chr7g0200281 RchiOBHm_Chr7g0200551 RchiOBHm_Chr7g0207611 RchiOBHm_Chr7g0212421 RchiOBHm_Chr7g0214991 RchiOBHm_Chr7g0219211 RchiOBHm_Chr7g0242371
rosa_laevigata RLG00000002389 RLG00000007980
rosa_roxburghii Rroxscaffold_1G00053480 Rroxscaffold_2G00090890 Rroxscaffold_2G00099660 Rroxscaffold_2G00134510 Rroxscaffold_3G00221450 Rroxscaffold_3G00240550 Rroxscaffold_4G00305710 Rroxscaffold_4G00306360 Rroxscaffold_4G00306800 Rroxscaffold_4G00329090 Rroxscaffold_5G00382750 Rroxscaffold_5G00385900 Rroxscaffold_6G00403080 Rroxscaffold_7G00172890 Rroxscaffold_7G00186690
rosa_samantha Rh1DG425600
rosa_wichuraiana Rw0G001640 Rw0G009160 Rw0G010480 Rw0G010520 Rw0G013850 Rw0G017170 Rw0G018520 Rw0G019280 Rw0G022780 Rw1G000360 Rw1G001410 Rw1G001630 Rw1G002100 Rw1G006810 Rw1G010680 Rw1G012700 Rw1G016160 Rw1G022180 Rw1G023580 Rw1G025640 Rw1G026310 Rw1G027230 Rw1G028110 Rw1G034180 Rw2G004990 Rw2G005840 Rw2G007350 Rw2G024730 Rw2G025580 Rw2G026670 Rw2G027210 Rw2G029060 Rw2G031560 Rw2G042190 Rw2G043850 Rw2G045990 Rw2G046130 Rw2G049290 Rw2G049310 Rw2G049790 Rw2G052250 Rw3G004350 Rw3G013100 Rw3G015280 Rw3G015720 Rw3G024630 Rw3G026470 Rw3G027840 Rw3G028960 Rw3G029130 Rw3G029160 Rw4G000280 Rw4G006650 Rw4G008970 Rw4G009310 Rw4G011730 Rw4G012000 Rw4G012610 Rw4G014300 Rw4G014690 Rw4G015190 Rw4G016470 Rw4G020750 Rw4G025060 Rw4G025080 Rw5G005610 Rw5G010380 Rw5G013970 Rw5G015130 Rw5G015250 Rw5G017640 Rw5G019910 Rw5G022410 Rw5G023550 Rw5G029710 Rw5G037650 Rw5G038280 Rw5G038570 Rw5G041550 Rw5G042600 Rw5G043910 Rw5G047850 Rw5G048200 Rw5G049920 Rw6G000260 Rw6G000530 Rw6G001710 Rw6G005090 Rw6G006730 Rw6G009310 Rw6G010950 Rw6G011630 Rw6G012080 Rw6G012750 Rw6G015970 Rw6G020700 Rw6G024350 Rw7G008540 Rw7G016620 Rw7G019400 Rw7G020010 Rw7G024240 Rw7G025630 Rw7G027550 Rw7G027770 Rw7G027960 Rw7G028450 Rw7G031280 Rw7G031970 Rw7G032180 Rw7G033590 Rw7G033720 Rw7G033890 Rw7G041800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1127
AciI CCGC 1 cut(s) 1125
AclWI GGATC 3 cut(s) 99, 366, 1169
AcsI RAATTY 2 cut(s) 141, 639
AcvI CACGTG 1 cut(s) 137
AfaI GTAC 5 cut(s) 338, 451, 770, 1073, 1166
AfiI CCNNNNNNNGG 1 cut(s) 765
AgsI TTSAA 8 cut(s) 163, 197, 334, 353, 703, 1016, 1064, 1136
AjnI CCWGG 2 cut(s) 124, 957
AluBI AGCT 6 cut(s) 159, 535, 848, 875, 1153, 1181
AluI AGCT 6 cut(s) 159, 535, 848, 875, 1153, 1181
Alw21I GWGCWC 1 cut(s) 929
Alw26I GTCTC 2 cut(s) 54, 285
Alw44I GTGCAC 1 cut(s) 925
AlwI GGATC 3 cut(s) 99, 366, 1169
AlwNI CAGNNNCTG 1 cut(s) 725
ApaLI GTGCAC 1 cut(s) 925
ApeKI GCWGC 1 cut(s) 962
ApoI RAATTY 2 cut(s) 141, 639
Asp700I GAANNNNTTC 2 cut(s) 144, 338
AspLEI GCGC 1 cut(s) 1002
AspS9I GGNCC 1 cut(s) 326
AsuHPI GGTGA 2 cut(s) 538, 920
AvaII GGWCC 1 cut(s) 326
BaeGI GKGCMC 2 cut(s) 662, 929
BbrPI CACGTG 1 cut(s) 137
BbsI GAAGAC 1 cut(s) 982
Bbv12I GWGCWC 1 cut(s) 929
BbvI GCAGC 1 cut(s) 949
BccI CCATC 1 cut(s) 39
BceAI ACGGC 1 cut(s) 222
BciT130I CCWGG 2 cut(s) 126, 959
BclI TGATCA 3 cut(s) 667, 1039, 1087
BcoDI GTCTC 2 cut(s) 54, 285
BfaI CTAG 4 cut(s) 95, 227, 794, 837
BfmI CTRYAG 1 cut(s) 623
BglII AGATCT 1 cut(s) 319
BisI GCNGC 1 cut(s) 963
BlsI GCNGC 1 cut(s) 964
BmcAI AGTACT 1 cut(s) 338
Bme1390I CCNGG 2 cut(s) 126, 959
Bme18I GGWCC 1 cut(s) 326
BmgT120I GGNCC 1 cut(s) 326
BmrFI CCNGG 2 cut(s) 126, 959
BmrI ACTGGG 2 cut(s) 739, 774
BmsI GCATC 1 cut(s) 875
BmuI ACTGGG 2 cut(s) 739, 774
BpiI GAAGAC 1 cut(s) 982
BplI GAGNNNNNCTC 4 cut(s) 106, 138, 480, 512
BpmI CTGGAG 1 cut(s) 276
BpuEI CTTGAG 3 cut(s) 139, 269, 1144
BsaAI YACGTR 2 cut(s) 137, 652
BsaI GGTCTC 1 cut(s) 54
BsaJI CCNNGG 1 cut(s) 343
Bsc4I CCNNNNNNNGG 1 cut(s) 765
Bse1I ACTGG 5 cut(s) 259, 734, 769, 986, 1098
Bse3DI GCAATG 1 cut(s) 867
BseBI CCWGG 2 cut(s) 126, 959
BseDI CCNNGG 1 cut(s) 343
BseGI GGATG 5 cut(s) 50, 70, 130, 244, 866
BseLI CCNNNNNNNGG 1 cut(s) 765
BseMI GCAATG 1 cut(s) 867
BseMII CTCAG 4 cut(s) 513, 732, 840, 1142
BseNI ACTGG 5 cut(s) 259, 734, 769, 986, 1098
BseRI GAGGAG 2 cut(s) 355, 444
BseSI GKGCMC 2 cut(s) 662, 929
BseXI GCAGC 1 cut(s) 949
BsgI GTGCAG 1 cut(s) 757
BsiHKAI GWGCWC 1 cut(s) 929
BslI CCNNNNNNNGG 1 cut(s) 765
BsmAI GTCTC 2 cut(s) 54, 285
BsmI GAATGC 1 cut(s) 79
Bso31I GGTCTC 1 cut(s) 54
Bsp1286I GDGCHC 2 cut(s) 662, 929
Bsp1407I TGTACA 1 cut(s) 1071
BspACI CCGC 1 cut(s) 1125
BspCNI CTCAG 4 cut(s) 512, 731, 841, 1141
BspPI GGATC 3 cut(s) 99, 366, 1169
BspQI GCTCTTC 1 cut(s) 800
BspTNI GGTCTC 1 cut(s) 54
BsrBI CCGCTC 1 cut(s) 1127
BsrDI GCAATG 1 cut(s) 867
BsrGI TGTACA 1 cut(s) 1071
BsrI ACTGG 5 cut(s) 259, 734, 769, 986, 1098
BssECI CCNNGG 1 cut(s) 343
BssT1I CCWWGG 1 cut(s) 343
Bst2UI CCWGG 2 cut(s) 126, 959
Bst4CI ACNGT 4 cut(s) 10, 664, 823, 1069
Bst6I CTCTTC 2 cut(s) 264, 800
BstAPI GCANNNNNTGC 2 cut(s) 740, 924
BstAUI TGTACA 1 cut(s) 1071
BstBAI YACGTR 2 cut(s) 137, 652
BstC8I GCNNGC 2 cut(s) 211, 444
BstDEI CTNAG 7 cut(s) 458, 499, 718, 849, 913, 1110, 1128
BstEII GGTNACC 1 cut(s) 788
BstF5I GGATG 5 cut(s) 50, 70, 130, 244, 866
BstHHI GCGC 1 cut(s) 1002
BstMAI GTCTC 2 cut(s) 54, 285
BstMWI GCNNNNNNNGC 5 cut(s) 210, 740, 872, 924, 1150
BstNI CCWGG 2 cut(s) 126, 959
BstNSI RCATGY 1 cut(s) 450
BstPI GGTNACC 1 cut(s) 788
BstSCI CCNGG 2 cut(s) 124, 957
BstSFI CTRYAG 1 cut(s) 623
BstSLI GKGCMC 2 cut(s) 662, 929
BstSNI TACGTA 1 cut(s) 652
BstV1I GCAGC 1 cut(s) 949
BstV2I GAAGAC 1 cut(s) 982
BstX2I RGATCY 2 cut(s) 91, 319
BstYI RGATCY 2 cut(s) 91, 319
BtsCI GGATG 5 cut(s) 50, 70, 130, 244, 866
BtsIMutI CAGTG 3 cut(s) 252, 828, 1074
Cac8I GCNNGC 2 cut(s) 211, 444
CaiI CAGNNNCTG 1 cut(s) 725
CfoI GCGC 1 cut(s) 1002
Cfr13I GGNCC 1 cut(s) 326
Csp6I GTAC 5 cut(s) 337, 450, 769, 1072, 1165
CviAII CATG 7 cut(s) 86, 173, 447, 598, 967, 995, 1083
CviQI GTAC 5 cut(s) 337, 450, 769, 1072, 1165
DdeI CTNAG 7 cut(s) 458, 499, 718, 849, 913, 1110, 1128
Eam1104I CTCTTC 2 cut(s) 264, 800
EarI CTCTTC 2 cut(s) 264, 800
Eco105I TACGTA 1 cut(s) 652
Eco130I CCWWGG 1 cut(s) 343
Eco31I GGTCTC 1 cut(s) 54
Eco47I GGWCC 1 cut(s) 326
Eco72I CACGTG 1 cut(s) 137
Eco91I GGTNACC 1 cut(s) 788
EcoO65I GGTNACC 1 cut(s) 788
EcoRI GAATTC 1 cut(s) 639
EcoRII CCWGG 2 cut(s) 124, 957
EcoT14I CCWWGG 1 cut(s) 343
EcoT22I ATGCAT 1 cut(s) 972
ErhI CCWWGG 1 cut(s) 343
FaeI CATG 7 cut(s) 89, 176, 450, 601, 970, 998, 1086
FalI AAGNNNNNCTT 4 cut(s) 62, 94, 278, 310
FatI CATG 7 cut(s) 85, 172, 446, 597, 966, 994, 1082
FauNDI CATATG 1 cut(s) 887
FbaI TGATCA 3 cut(s) 667, 1039, 1087
Fnu4HI GCNGC 1 cut(s) 963
FokI GGATG 5 cut(s) 57, 77, 117, 251, 853
Fsp4HI GCNGC 1 cut(s) 963
FspBI CTAG 4 cut(s) 95, 227, 794, 837
GlaI GCGC 1 cut(s) 1001
GluI GCNGC 1 cut(s) 963
GsuI CTGGAG 1 cut(s) 276
HhaI GCGC 1 cut(s) 1002
Hin1II CATG 7 cut(s) 89, 176, 450, 601, 970, 998, 1086
Hin6I GCGC 1 cut(s) 1000
HinP1I GCGC 1 cut(s) 1000
HindIII AAGCTT 3 cut(s) 157, 533, 1151
HinfI GANTC 4 cut(s) 179, 628, 722, 1114
HphI GGTGA 2 cut(s) 538, 920
Hpy166II GTNNAC 5 cut(s) 759, 881, 927, 1072, 1074
Hpy188I TCNGA 3 cut(s) 502, 721, 727
Hpy188III TCNNGA 5 cut(s) 70, 95, 163, 413, 1037
Hpy8I GTNNAC 5 cut(s) 759, 881, 927, 1072, 1074
HpyAV CCTTC 1 cut(s) 424
HpyCH4III ACNGT 4 cut(s) 10, 664, 823, 1069
HpyCH4IV ACGT 2 cut(s) 136, 651
HpyCH4V TGCA 8 cut(s) 85, 176, 446, 601, 774, 860, 927, 970
HpyF10VI GCNNNNNNNGC 5 cut(s) 210, 740, 872, 924, 1150
HpyF3I CTNAG 7 cut(s) 458, 499, 718, 849, 913, 1110, 1128
HpySE526I ACGT 2 cut(s) 136, 651
Hsp92II CATG 7 cut(s) 89, 176, 450, 601, 970, 998, 1086
HspAI GCGC 1 cut(s) 1000
Ksp22I TGATCA 3 cut(s) 667, 1039, 1087
LguI GCTCTTC 1 cut(s) 800
Lsp1109I GCAGC 1 cut(s) 949
LweI GCATC 1 cut(s) 875
MaeI CTAG 4 cut(s) 95, 227, 794, 837
MaeII ACGT 2 cut(s) 136, 651
MaeIII GTNAC 5 cut(s) 695, 788, 796, 908, 950
MbiI CCGCTC 1 cut(s) 1127
MboII GAAGA 9 cut(s) 110, 113, 137, 281, 401, 635, 697, 817, 982
MflI RGATCY 2 cut(s) 91, 319
MhlI GDGCHC 2 cut(s) 662, 929
MluCI AATT 7 cut(s) 37, 141, 215, 348, 593, 639, 675
MlyI GAGTC 2 cut(s) 173, 716
MnlI CCTC 8 cut(s) 132, 163, 376, 412, 465, 504, 575, 779
Mph1103I ATGCAT 1 cut(s) 972
MroXI GAANNNNTTC 2 cut(s) 144, 338
MseI TTAA 6 cut(s) 245, 276, 383, 471, 483, 893
MslI CAYNNNNRTG 2 cut(s) 135, 1081
MspR9I CCNGG 2 cut(s) 126, 959
Mva1269I GAATGC 1 cut(s) 79
MvaI CCWGG 2 cut(s) 126, 959
MwoI GCNNNNNNNGC 5 cut(s) 210, 740, 872, 924, 1150
NdeI CATATG 1 cut(s) 887
NlaIII CATG 7 cut(s) 89, 176, 450, 601, 970, 998, 1086
NmuCI GTSAC 3 cut(s) 695, 908, 950
NsiI ATGCAT 1 cut(s) 972
NspI RCATGY 1 cut(s) 450
PciSI GCTCTTC 1 cut(s) 800
PctI GAATGC 1 cut(s) 79
PdmI GAANNNNTTC 2 cut(s) 144, 338
PfeI GAWTC 2 cut(s) 628, 1114
PfoI TCCNGGA 1 cut(s) 124
PkrI GCNGC 1 cut(s) 964
PleI GAGTC 2 cut(s) 173, 716
PmaCI CACGTG 1 cut(s) 137
PmlI CACGTG 1 cut(s) 137
PpsI GAGTC 2 cut(s) 173, 716
Ppu21I YACGTR 2 cut(s) 137, 652
Psp6I CCWGG 2 cut(s) 124, 957
PspCI CACGTG 1 cut(s) 137
PspEI GGTNACC 1 cut(s) 788
PspGI CCWGG 2 cut(s) 124, 957
PspPI GGNCC 1 cut(s) 326
PstNI CAGNNNCTG 1 cut(s) 725
PsuI RGATCY 2 cut(s) 91, 319
RsaI GTAC 5 cut(s) 338, 451, 770, 1073, 1166
RsaNI GTAC 5 cut(s) 337, 450, 769, 1072, 1165
RseI CAYNNNNRTG 2 cut(s) 135, 1081
SapI GCTCTTC 1 cut(s) 800
SaqAI TTAA 6 cut(s) 245, 276, 383, 471, 483, 893
SatI GCNGC 1 cut(s) 963
Sau96I GGNCC 1 cut(s) 326
ScaI AGTACT 1 cut(s) 338
SchI GAGTC 2 cut(s) 173, 716
ScrFI CCNGG 2 cut(s) 126, 959
SduI GDGCHC 2 cut(s) 662, 929
SfaNI GCATC 1 cut(s) 875
SfcI CTRYAG 1 cut(s) 623
SinI GGWCC 1 cut(s) 326
SmiMI CAYNNNNRTG 2 cut(s) 135, 1081
SmlI CTYRAG 3 cut(s) 154, 284, 1159
SmoI CTYRAG 3 cut(s) 154, 284, 1159
SnaBI TACGTA 1 cut(s) 652
Sse9I AATT 7 cut(s) 37, 141, 215, 348, 593, 639, 675
SsiI CCGC 1 cut(s) 1125
SspMI CTAG 4 cut(s) 95, 227, 794, 837
StyD4I CCNGG 2 cut(s) 124, 957
StyI CCWWGG 1 cut(s) 343
TaaI ACNGT 4 cut(s) 10, 664, 823, 1069
TaiI ACGT 2 cut(s) 139, 654
TaqI TCGA 2 cut(s) 13, 751
TasI AATT 7 cut(s) 37, 141, 215, 348, 593, 639, 675
TatI WGTACW 3 cut(s) 336, 449, 1071
TfiI GAWTC 2 cut(s) 628, 1114
Tru1I TTAA 6 cut(s) 245, 276, 383, 471, 483, 893
Tru9I TTAA 6 cut(s) 245, 276, 383, 471, 483, 893
TscAI CASTG 3 cut(s) 259, 828, 1074
TseFI GTSAC 3 cut(s) 695, 908, 950
TseI GCWGC 1 cut(s) 962
Tsp45I GTSAC 3 cut(s) 695, 908, 950
TspDTI ATGAA 5 cut(s) 17, 443, 586, 698, 769
TspRI CASTG 3 cut(s) 259, 828, 1074
VneI GTGCAC 1 cut(s) 925
VpaK11BI GGWCC 1 cut(s) 326
XapI RAATTY 2 cut(s) 141, 639
XbaI TCTAGA 1 cut(s) 94
XceI RCATGY 1 cut(s) 450
XmnI GAANNNNTTC 2 cut(s) 144, 338
XspI CTAG 4 cut(s) 95, 227, 794, 837
ZrmI AGTACT 1 cut(s) 338
Zsp2I ATGCAT 1 cut(s) 972
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.