Reverse transcriptase (RNA-dependent DNA polymerase)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_2 | PF07727 | 2 - 63 | 6.4e-09 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 37, 170 |
| AcsI | RAATTY | 3 cut(s) | 80, 193, 517 |
| AdeI | CACNNNGTG | 1 cut(s) | 875 |
| AfaI | GTAC | 4 cut(s) | 391, 733, 740, 807 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 585 |
| AgsI | TTSAA | 3 cut(s) | 61, 80, 229 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 53, 85 |
| AluBI | AGCT | 2 cut(s) | 695, 782 |
| AluI | AGCT | 2 cut(s) | 695, 782 |
| Alw21I | GWGCWC | 1 cut(s) | 166 |
| Alw26I | GTCTC | 4 cut(s) | 117, 470, 562, 655 |
| ApeKI | GCWGC | 2 cut(s) | 359, 692 |
| ApoI | RAATTY | 3 cut(s) | 80, 193, 517 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 304, 336 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 65 |
| AsuII | TTCGAA | 1 cut(s) | 310 |
| BbsI | GAAGAC | 1 cut(s) | 499 |
| Bbv12I | GWGCWC | 1 cut(s) | 166 |
| BbvI | GCAGC | 2 cut(s) | 346, 704 |
| BccI | CCATC | 1 cut(s) | 209 |
| BceAI | ACGGC | 1 cut(s) | 456 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 320, 354 |
| BcoDI | GTCTC | 4 cut(s) | 117, 470, 562, 655 |
| BfaI | CTAG | 4 cut(s) | 158, 240, 561, 824 |
| BisI | GCNGC | 2 cut(s) | 360, 693 |
| BlsI | GCNGC | 2 cut(s) | 361, 694 |
| BmsI | GCATC | 4 cut(s) | 340, 346, 458, 670 |
| BpiI | GAAGAC | 1 cut(s) | 499 |
| Bpu14I | TTCGAA | 1 cut(s) | 310 |
| BsaAI | YACGTR | 2 cut(s) | 805, 875 |
| BsaJI | CCNNGG | 4 cut(s) | 49, 183, 511, 846 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 585 |
| Bse3DI | GCAATG | 2 cut(s) | 228, 597 |
| BseDI | CCNNGG | 4 cut(s) | 49, 183, 511, 846 |
| BseGI | GGATG | 2 cut(s) | 361, 661 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 585 |
| BseMI | GCAATG | 2 cut(s) | 228, 597 |
| BseMII | CTCAG | 1 cut(s) | 388 |
| BseXI | GCAGC | 2 cut(s) | 346, 704 |
| BsiHKAI | GWGCWC | 1 cut(s) | 166 |
| BslFI | GGGAC | 1 cut(s) | 780 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 585 |
| BsmAI | GTCTC | 4 cut(s) | 117, 470, 562, 655 |
| BsmFI | GGGAC | 1 cut(s) | 780 |
| Bsp119I | TTCGAA | 1 cut(s) | 310 |
| Bsp1286I | GDGCHC | 1 cut(s) | 166 |
| Bsp143I | GATC | 6 cut(s) | 255, 485, 563, 640, 856, 895 |
| Bsp19I | CCATGG | 1 cut(s) | 183 |
| BspACI | CCGC | 2 cut(s) | 37, 170 |
| BspCNI | CTCAG | 1 cut(s) | 387 |
| BspHI | TCATGA | 1 cut(s) | 892 |
| BspT104I | TTCGAA | 1 cut(s) | 310 |
| BsrDI | GCAATG | 2 cut(s) | 228, 597 |
| BssECI | CCNNGG | 4 cut(s) | 49, 183, 511, 846 |
| BssMI | GATC | 6 cut(s) | 255, 485, 563, 640, 856, 895 |
| BssT1I | CCWWGG | 4 cut(s) | 49, 183, 511, 846 |
| Bst4CI | ACNGT | 1 cut(s) | 280 |
| BstBAI | YACGTR | 2 cut(s) | 805, 875 |
| BstBI | TTCGAA | 1 cut(s) | 310 |
| BstC8I | GCNNGC | 4 cut(s) | 166, 170, 174, 780 |
| BstDEI | CTNAG | 3 cut(s) | 374, 540, 607 |
| BstDSI | CCRYGG | 1 cut(s) | 183 |
| BstF5I | GGATG | 2 cut(s) | 361, 661 |
| BstKTI | GATC | 6 cut(s) | 258, 488, 566, 643, 859, 898 |
| BstMAI | GTCTC | 4 cut(s) | 117, 470, 562, 655 |
| BstMBI | GATC | 6 cut(s) | 255, 485, 563, 640, 856, 895 |
| BstNSI | RCATGY | 2 cut(s) | 176, 606 |
| BstSNI | TACGTA | 1 cut(s) | 805 |
| BstV1I | GCAGC | 2 cut(s) | 346, 704 |
| BstV2I | GAAGAC | 1 cut(s) | 499 |
| BtgI | CCRYGG | 1 cut(s) | 183 |
| BtsCI | GGATG | 2 cut(s) | 361, 661 |
| Cac8I | GCNNGC | 4 cut(s) | 166, 170, 174, 780 |
| CciI | TCATGA | 1 cut(s) | 892 |
| CseI | GACGC | 1 cut(s) | 493 |
| Csp6I | GTAC | 4 cut(s) | 390, 732, 739, 806 |
| CviJI | RGCY | 9 cut(s) | 289, 337, 443, 578, 596, 622, 695, 782, 845 |
| CviKI_1 | RGCY | 9 cut(s) | 289, 337, 443, 578, 596, 622, 695, 782, 845 |
| CviQI | GTAC | 4 cut(s) | 390, 732, 739, 806 |
| DdeI | CTNAG | 3 cut(s) | 374, 540, 607 |
| DpnI | GATC | 6 cut(s) | 257, 487, 565, 642, 858, 897 |
| DpnII | GATC | 6 cut(s) | 255, 485, 563, 640, 856, 895 |
| DraIII | CACNNNGTG | 1 cut(s) | 875 |
| Eco105I | TACGTA | 1 cut(s) | 805 |
| Eco130I | CCWWGG | 4 cut(s) | 49, 183, 511, 846 |
| Eco32I | GATATC | 1 cut(s) | 136 |
| EcoRI | GAATTC | 1 cut(s) | 80 |
| EcoRV | GATATC | 1 cut(s) | 136 |
| EcoT14I | CCWWGG | 4 cut(s) | 49, 183, 511, 846 |
| EcoT22I | ATGCAT | 1 cut(s) | 333 |
| ErhI | CCWWGG | 4 cut(s) | 49, 183, 511, 846 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 53, 85 |
| FaqI | GGGAC | 1 cut(s) | 780 |
| FauI | CCCGC | 1 cut(s) | 177 |
| Fnu4HI | GCNGC | 2 cut(s) | 360, 693 |
| FokI | GGATG | 2 cut(s) | 368, 648 |
| Fsp4HI | GCNGC | 2 cut(s) | 360, 693 |
| FspBI | CTAG | 4 cut(s) | 158, 240, 561, 824 |
| GluI | GCNGC | 2 cut(s) | 360, 693 |
| HgaI | GACGC | 1 cut(s) | 493 |
| HinfI | GANTC | 4 cut(s) | 9, 146, 319, 369 |
| Hpy166II | GTNNAC | 1 cut(s) | 301 |
| Hpy188I | TCNGA | 2 cut(s) | 377, 867 |
| Hpy188III | TCNNGA | 4 cut(s) | 150, 259, 561, 893 |
| Hpy8I | GTNNAC | 1 cut(s) | 301 |
| HpyCH4III | ACNGT | 1 cut(s) | 280 |
| HpyCH4IV | ACGT | 5 cut(s) | 88, 625, 730, 804, 874 |
| HpyCH4V | TGCA | 7 cut(s) | 128, 142, 331, 637, 661, 700, 778 |
| HpyF3I | CTNAG | 3 cut(s) | 374, 540, 607 |
| HpySE526I | ACGT | 5 cut(s) | 88, 625, 730, 804, 874 |
| Kzo9I | GATC | 6 cut(s) | 255, 485, 563, 640, 856, 895 |
| LmnI | GCTCC | 2 cut(s) | 4, 218 |
| LpnPI | CCDG | 9 cut(s) | 135, 275, 318, 381, 449, 480, 674, 729, 768 |
| Lsp1109I | GCAGC | 2 cut(s) | 346, 704 |
| LweI | GCATC | 4 cut(s) | 340, 346, 458, 670 |
| MaeI | CTAG | 4 cut(s) | 158, 240, 561, 824 |
| MaeII | ACGT | 5 cut(s) | 88, 625, 730, 804, 874 |
| MaeIII | GTNAC | 2 cut(s) | 280, 490 |
| MalI | GATC | 6 cut(s) | 257, 487, 565, 642, 858, 897 |
| MboI | GATC | 6 cut(s) | 255, 485, 563, 640, 856, 895 |
| MboII | GAAGA | 3 cut(s) | 14, 477, 499 |
| MhlI | GDGCHC | 1 cut(s) | 166 |
| MluCI | AATT | 7 cut(s) | 80, 193, 267, 323, 517, 611, 860 |
| MlyI | GAGTC | 3 cut(s) | 3, 328, 378 |
| MmeI | TCCRAC | 1 cut(s) | 844 |
| MnlI | CCTC | 3 cut(s) | 348, 383, 808 |
| Mph1103I | ATGCAT | 1 cut(s) | 333 |
| MroXI | GAANNNNTTC | 1 cut(s) | 65 |
| MseI | TTAA | 3 cut(s) | 27, 197, 384 |
| MslI | CAYNNNNRTG | 1 cut(s) | 107 |
| NcoI | CCATGG | 1 cut(s) | 183 |
| NdeII | GATC | 6 cut(s) | 255, 485, 563, 640, 856, 895 |
| NmuCI | GTSAC | 1 cut(s) | 280 |
| NsiI | ATGCAT | 1 cut(s) | 333 |
| NspI | RCATGY | 2 cut(s) | 176, 606 |
| NspV | TTCGAA | 1 cut(s) | 310 |
| PaeI | GCATGC | 1 cut(s) | 176 |
| PagI | TCATGA | 1 cut(s) | 892 |
| PdmI | GAANNNNTTC | 1 cut(s) | 65 |
| PfeI | GAWTC | 1 cut(s) | 146 |
| PkrI | GCNGC | 2 cut(s) | 361, 694 |
| PleI | GAGTC | 3 cut(s) | 3, 327, 377 |
| PpsI | GAGTC | 3 cut(s) | 3, 327, 377 |
| Ppu21I | YACGTR | 2 cut(s) | 805, 875 |
| RsaI | GTAC | 4 cut(s) | 391, 733, 740, 807 |
| RsaNI | GTAC | 4 cut(s) | 390, 732, 739, 806 |
| RseI | CAYNNNNRTG | 1 cut(s) | 107 |
| SaqAI | TTAA | 3 cut(s) | 27, 197, 384 |
| SatI | GCNGC | 2 cut(s) | 360, 693 |
| Sau3AI | GATC | 6 cut(s) | 255, 485, 563, 640, 856, 895 |
| SchI | GAGTC | 3 cut(s) | 3, 328, 378 |
| SduI | GDGCHC | 1 cut(s) | 166 |
| SfaNI | GCATC | 4 cut(s) | 340, 346, 458, 670 |
| SfuI | TTCGAA | 1 cut(s) | 310 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 107 |
| SmlI | CTYRAG | 1 cut(s) | 11 |
| SmoI | CTYRAG | 1 cut(s) | 11 |
| SnaBI | TACGTA | 1 cut(s) | 805 |
| SphI | GCATGC | 1 cut(s) | 176 |
| Sse9I | AATT | 7 cut(s) | 80, 193, 267, 323, 517, 611, 860 |
| SsiI | CCGC | 2 cut(s) | 37, 170 |
| SspMI | CTAG | 4 cut(s) | 158, 240, 561, 824 |
| StyI | CCWWGG | 4 cut(s) | 49, 183, 511, 846 |
| TaaI | ACNGT | 1 cut(s) | 280 |
| TaiI | ACGT | 5 cut(s) | 91, 628, 733, 807, 877 |
| TaqI | TCGA | 3 cut(s) | 310, 340, 456 |
| TasI | AATT | 7 cut(s) | 80, 193, 267, 323, 517, 611, 860 |
| TatI | WGTACW | 1 cut(s) | 738 |
| TfiI | GAWTC | 1 cut(s) | 146 |
| Tru1I | TTAA | 3 cut(s) | 27, 197, 384 |
| Tru9I | TTAA | 3 cut(s) | 27, 197, 384 |
| TseFI | GTSAC | 1 cut(s) | 280 |
| TseI | GCWGC | 2 cut(s) | 359, 692 |
| Tsp45I | GTSAC | 1 cut(s) | 280 |
| TspDTI | ATGAA | 4 cut(s) | 56, 316, 741, 881 |
| XapI | RAATTY | 3 cut(s) | 80, 193, 517 |
| XbaI | TCTAGA | 1 cut(s) | 560 |
| XceI | RCATGY | 2 cut(s) | 176, 606 |
| XmnI | GAANNNNTTC | 1 cut(s) | 65 |
| XspI | CTAG | 4 cut(s) | 158, 240, 561, 824 |
| Zsp2I | ATGCAT | 1 cut(s) | 333 |