RchiOBHm_Chr5g0031351

beta-galactosidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000071
Physical Location & Seq
Forward (+)
24947769 .. 24949022
1254 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31062

Sequence Viewer

Length: 1254 bp
ATGCGGGATGAGAAGTGGATGCAAGCAATGGCAGTCGAAATGGATGCTCTTGAGAAGAATTGTACATGGGAGTTAGTATCATTACCACCCGGGAAGCAGACAGTTGGTTGTCGGTGGGTGTTTACTGTGAAACACAATTCGGATGGATCGGTGGACAGGTACAAAGCTCGCTTAGTCGCTAAAGGCTATACTCAGAAGTATGGGGTGGACTATGATGAGACGTTTGCACCAGTGGCCAAAATTAACACAATTCGGGTACTTCTCTCGTTAGCTGCTAATCTTGATTGGCCTTTGCAACAATTTGATGTTAAAAATGCATTCTTGCATGGTGATCTGCATGAAGAGGTTTATATGGATTTGCCTCCTGGATATGGTACTTCCTCTAAAGAGCAGGTGGTGTGTAAATTGAAGAAGTCTCTTTATGGTCTGAAACAGTCTCCCAGAGCTTGGTTTGGCCGGTTTACTAAGTTCATGAAGAAAATTGGGTATCGACAGAGCAATTCTGATCACACCTTGTTCCTTAAACATCAGTGTGGTAAAGTGACTGCCTTGATTATTTATGTTGATGACATGGTTGTGACAGGTGATGACTTGGAGGAGATTCAAAGGCTACAAGGTCAGTTATCTTCTGAATTTGAGATGAAAGATTTGGGTAGTTTAAAATATTTCTTGGGAATTGAAGTTGCTCGTGGGAAGGGTTGTATTGTGTTGAGTCAAAGGAAGTATGTTCTAGACTTGCTGGCAGAAACAGGTATGCTTGACTGTCAACCTATCAATACTCCTATCGAGCAGAACCATCGATTAGCAGAGTATTTGGATCAAGTACCTACAAATAAAGCGAGATACCAAAGGTTAGTTGGACGGTTGATATATTTGTCTCACACTAGACCGGATTTAGCTTATGCAGTTAGTGTGGTGAGCCAATTTATGCATAATCCTAGTGAGGCTCATATGGGTGCTGTATTTCGAATTTTGCGGTATTTAAAGTCTGCTCCAGGAAAGGGATTAATTTTTTCAAAATACAGTCATCTAGATGTTTCTGGATACACAGATGCCGACTGGGCAGGTAATATTACAGATCGCAGGTCCACTTCGGGCTACTTCACATTTGTGGGTGGTAACTTGGTTACGTGGAAGAGCAAGAAACAAAAGGTGGTGGCTCGTTCTAGTGCAGAAGCAGAGTATAGAGGAATGGCCCGAGGACTTTGTGAGATGTTGTGGTTGAGAAATTTGTTGAGAGATTTAGGGTTCTAG

Protein Analysis

417

Amino Acids

47.47

Weight (kDa)

9.12

Isoelectric Point (pI)

30.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_2 PF07727 21 - 263 5.3e-76 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000071)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G23160 AT4G23160
fragaria_vesca FvH4_2g08111 FvH4_2g17332 FvH4_2g18071 FvH4_2g20531 FvH4_2g20842 FvH4_2g20842 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g24231 FvH4_2g24232 FvH4_3g00831 FvH4_3g00831 FvH4_3g03561 FvH4_3g03561 FvH4_3g10282 FvH4_3g18165 FvH4_3g19021 FvH4_3g24071 FvH4_3g33123 FvH4_3g33970 FvH4_3g38851 FvH4_3g39133 FvH4_3g39271 FvH4_4g00981 FvH4_4g08191 FvH4_4g08311 FvH4_4g08311 FvH4_4g08311 FvH4_4g09341 FvH4_4g12550 FvH4_4g12550 FvH4_4g12550 FvH4_4g13391 FvH4_4g14842 FvH4_4g27901 FvH4_5g11561 FvH4_5g15611 FvH4_5g17991 FvH4_5g27871 FvH4_5g29995 FvH4_5g39662 FvH4_6g02392 FvH4_6g12781 FvH4_6g20106 FvH4_6g20106 FvH4_6g20106 FvH4_6g30872 FvH4_6g34901 FvH4_6g35632 FvH4_6g36661 FvH4_6g43795 FvH4_6g44611 FvH4_7g01791 FvH4_7g04041 FvH4_7g12551 FvH4_7g23351
malus_domestica MD00G1134200.v1.1 MD01G1096500.v1.1 MD01G1128200.v1.1 MD02G1250500.v1.1 MD02G1294900.v1.1 MD03G1121800.v1.1 MD04G1021400.v1.1 MD04G1051100.v1.1 MD04G1051300.v1.1 MD04G1099000.v1.1 MD05G1047900.v1.1 MD05G1298000.v1.1 MD06G1064200.v1.1 MD06G1120600.v1.1 MD07G1013900.v1.1 MD09G1226900.v1.1 MD10G1196700.v1.1 MD10G1307000.v1.1 MD10G1338900.v1.1 MD11G1107300.v1.1 MD11G1138300.v1.1 MD11G1236700.v1.1 MD12G1032500.v1.1 MD12G1150100.v1.1 MD12G1247800.v1.1 MD17G1267900.v1.1
pyrus_communis pycom02g03660 pycom02g13370 pycom02g14840 pycom02g18400 pycom02g18880 pycom02g22740 pycom04g08800 pycom04g15770 pycom05g07980 pycom05g19640 pycom06g09360 pycom07g13160 pycom08g11820 pycom08g21740 pycom09g19980 pycom10g04810 pycom10g05420 pycom10g14650 pycom11g03140 pycom11g21550 pycom12g14740 pycom13g01600 pycom13g29510 pycom14g07060 pycom15g01990 pycom15g19850 pycom15g30860 pycom16g15290 pycom16g16250 pycom16g25390 pycom17g17270 pycom520g00070
rosa_chinensis RchiOBHm_Chr1g0316691 RchiOBHm_Chr1g0320751 RchiOBHm_Chr1g0320771 RchiOBHm_Chr1g0322231 RchiOBHm_Chr1g0322861 RchiOBHm_Chr1g0328471 RchiOBHm_Chr1g0333321 RchiOBHm_Chr1g0337871 RchiOBHm_Chr1g0339051 RchiOBHm_Chr1g0349861 RchiOBHm_Chr1g0361951 RchiOBHm_Chr1g0365931 RchiOBHm_Chr1g0365981 RchiOBHm_Chr1g0377711 RchiOBHm_Chr1g0381581 RchiOBHm_Chr1g0382741 RchiOBHm_Chr1g0383501 RchiOBHm_Chr2g0101201 RchiOBHm_Chr2g0113601 RchiOBHm_Chr2g0124031 RchiOBHm_Chr2g0135481 RchiOBHm_Chr2g0148361 RchiOBHm_Chr2g0150101 RchiOBHm_Chr2g0154181 RchiOBHm_Chr2g0156071 RchiOBHm_Chr2g0166521 RchiOBHm_Chr2g0166821 RchiOBHm_Chr3g0448011 RchiOBHm_Chr3g0450941 RchiOBHm_Chr3g0450961 RchiOBHm_Chr3g0451051 RchiOBHm_Chr3g0451721 RchiOBHm_Chr3g0453371 RchiOBHm_Chr3g0454881 RchiOBHm_Chr3g0457421 RchiOBHm_Chr3g0457661 RchiOBHm_Chr3g0460011 RchiOBHm_Chr3g0461531 RchiOBHm_Chr3g0461981 RchiOBHm_Chr3g0463471 RchiOBHm_Chr3g0466641 RchiOBHm_Chr3g0468181 RchiOBHm_Chr3g0483351 RchiOBHm_Chr4g0394001 RchiOBHm_Chr4g0397261 RchiOBHm_Chr4g0404531 RchiOBHm_Chr4g0410841 RchiOBHm_Chr4g0415501 RchiOBHm_Chr4g0425221 RchiOBHm_Chr4g0430811 RchiOBHm_Chr5g0010831 RchiOBHm_Chr5g0016831 RchiOBHm_Chr5g0016851 RchiOBHm_Chr5g0031351 RchiOBHm_Chr5g0032151 RchiOBHm_Chr5g0041201 RchiOBHm_Chr5g0042191 RchiOBHm_Chr5g0064121 RchiOBHm_Chr5g0066601 RchiOBHm_Chr5g0078371 RchiOBHm_Chr5g0079271 RchiOBHm_Chr6g0263751 RchiOBHm_Chr6g0285111 RchiOBHm_Chr6g0298961 RchiOBHm_Chr6g0300481 RchiOBHm_Chr6g0303211 RchiOBHm_Chr7g0192341 RchiOBHm_Chr7g0196171 RchiOBHm_Chr7g0200281 RchiOBHm_Chr7g0200551 RchiOBHm_Chr7g0207611 RchiOBHm_Chr7g0212421 RchiOBHm_Chr7g0214991 RchiOBHm_Chr7g0219211 RchiOBHm_Chr7g0242371
rosa_laevigata RLG00000002389 RLG00000007980
rosa_roxburghii Rroxscaffold_1G00053480 Rroxscaffold_2G00090890 Rroxscaffold_2G00099660 Rroxscaffold_2G00134510 Rroxscaffold_3G00221450 Rroxscaffold_3G00240550 Rroxscaffold_4G00305710 Rroxscaffold_4G00306360 Rroxscaffold_4G00306800 Rroxscaffold_4G00329090 Rroxscaffold_5G00382750 Rroxscaffold_5G00385900 Rroxscaffold_6G00403080 Rroxscaffold_7G00172890 Rroxscaffold_7G00186690
rosa_samantha Rh1DG425600
rosa_wichuraiana Rw0G001640 Rw0G009160 Rw0G010480 Rw0G010520 Rw0G013850 Rw0G017170 Rw0G018520 Rw0G019280 Rw0G022780 Rw1G000360 Rw1G001410 Rw1G001630 Rw1G002100 Rw1G006810 Rw1G010680 Rw1G012700 Rw1G016160 Rw1G022180 Rw1G023580 Rw1G025640 Rw1G026310 Rw1G027230 Rw1G028110 Rw1G034180 Rw2G004990 Rw2G005840 Rw2G007350 Rw2G024730 Rw2G025580 Rw2G026670 Rw2G027210 Rw2G029060 Rw2G031560 Rw2G042190 Rw2G043850 Rw2G045990 Rw2G046130 Rw2G049290 Rw2G049310 Rw2G049790 Rw2G052250 Rw3G004350 Rw3G013100 Rw3G015280 Rw3G015720 Rw3G024630 Rw3G026470 Rw3G027840 Rw3G028960 Rw3G029130 Rw3G029160 Rw4G000280 Rw4G006650 Rw4G008970 Rw4G009310 Rw4G011730 Rw4G012000 Rw4G012610 Rw4G014300 Rw4G014690 Rw4G015190 Rw4G016470 Rw4G020750 Rw4G025060 Rw4G025080 Rw5G005610 Rw5G010380 Rw5G013970 Rw5G015130 Rw5G015250 Rw5G017640 Rw5G019910 Rw5G022410 Rw5G023550 Rw5G029710 Rw5G037650 Rw5G038280 Rw5G038570 Rw5G041550 Rw5G042600 Rw5G043910 Rw5G047850 Rw5G048200 Rw5G049920 Rw6G000260 Rw6G000530 Rw6G001710 Rw6G005090 Rw6G006730 Rw6G009310 Rw6G010950 Rw6G011630 Rw6G012080 Rw6G012750 Rw6G015970 Rw6G020700 Rw6G024350 Rw7G008540 Rw7G016620 Rw7G019400 Rw7G020010 Rw7G024240 Rw7G025630 Rw7G027550 Rw7G027770 Rw7G027960 Rw7G028450 Rw7G031280 Rw7G031970 Rw7G032180 Rw7G033590 Rw7G033720 Rw7G033890 Rw7G041800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 382
Acc36I ACCTGC 3 cut(s) 382, 1055, 1074
AccB7I CCANNNNNTGG 1 cut(s) 447
AciI CCGC 2 cut(s) 4, 976
AclWI GGATC 2 cut(s) 154, 825
AcoI YGGCCR 2 cut(s) 234, 454
AcsI RAATTY 3 cut(s) 632, 969, 1228
AfaI GTAC 5 cut(s) 64, 161, 258, 376, 825
AfiI CCNNNNNNNGG 3 cut(s) 371, 447, 1001
AgsI TTSAA 4 cut(s) 409, 605, 680, 1017
AjnI CCWGG 2 cut(s) 364, 994
AleI CACNNNNGTG 1 cut(s) 1109
AluBI AGCT 4 cut(s) 167, 272, 446, 899
AluI AGCT 4 cut(s) 167, 272, 446, 899
Alw26I GTCTC 4 cut(s) 212, 420, 441, 882
AlwI GGATC 2 cut(s) 154, 825
Ama87I CYCGRG 2 cut(s) 89, 1197
AoxI GGCC 4 cut(s) 234, 287, 454, 1194
ApeKI GCWGC 1 cut(s) 272
ApoI RAATTY 3 cut(s) 632, 969, 1228
AseI ATTAAT 1 cut(s) 1007
AspS9I GGNCC 2 cut(s) 1086, 1195
AsuC2I CCSGG 2 cut(s) 90, 91
AsuHPI GGTGA 3 cut(s) 341, 596, 928
AsuII TTCGAA 1 cut(s) 967
AvaI CYCGRG 2 cut(s) 89, 1197
AvaII GGWCC 1 cut(s) 1086
BalI TGGCCA 1 cut(s) 236
BauI CACGAG 1 cut(s) 687
BbvI GCAGC 1 cut(s) 259
BccI CCATC 2 cut(s) 137, 804
BcgI CGANNNNNNTGC 4 cut(s) 26, 60, 779, 813
BciT130I CCWGG 2 cut(s) 366, 996
BciVI GTATCC 1 cut(s) 1037
BclI TGATCA 1 cut(s) 505
BcnI CCSGG 2 cut(s) 90, 91
BcoDI GTCTC 4 cut(s) 212, 420, 441, 882
BfaI CTAG 6 cut(s) 731, 885, 939, 1031, 1167, 1252
BfuAI ACCTGC 3 cut(s) 382, 1055, 1074
BfuI GTATCC 1 cut(s) 1037
BglI GCCNNNNNGGC 1 cut(s) 1061
BisI GCNGC 1 cut(s) 273
BlsI GCNGC 1 cut(s) 274
Bme1390I CCNGG 4 cut(s) 90, 91, 366, 996
Bme18I GGWCC 1 cut(s) 1086
BmeT110I CYCGRG 2 cut(s) 89, 1197
BmgT120I GGNCC 2 cut(s) 1086, 1195
BmrFI CCNGG 4 cut(s) 90, 91, 366, 996
BmrI ACTGGG 1 cut(s) 1069
BmsI GCATC 3 cut(s) 9, 34, 1042
BmuI ACTGGG 1 cut(s) 1069
BpmI CTGGAG 1 cut(s) 978
Bpu14I TTCGAA 1 cut(s) 967
BpuEI CTTGAG 1 cut(s) 71
BpuMI CCSGG 2 cut(s) 90, 91
Bsa29I ATCGAT 1 cut(s) 799
BsaAI YACGTR 1 cut(s) 1131
BsaJI CCNNGG 2 cut(s) 89, 1198
BsaWI WCCGGW 1 cut(s) 889
Bsc4I CCNNNNNNNGG 3 cut(s) 371, 447, 1001
Bse118I RCCGGY 1 cut(s) 456
Bse1I ACTGG 2 cut(s) 230, 1064
Bse3DI GCAATG 1 cut(s) 33
BseBI CCWGG 2 cut(s) 366, 996
BseCI ATCGAT 1 cut(s) 799
BseDI CCNNGG 2 cut(s) 89, 1198
BseGI GGATG 4 cut(s) 13, 24, 49, 148
BseLI CCNNNNNNNGG 3 cut(s) 371, 447, 1001
BseMI GCAATG 1 cut(s) 33
BseMII CTCAG 1 cut(s) 206
BseNI ACTGG 2 cut(s) 230, 1064
BseRI GAGGAG 1 cut(s) 611
BseXI GCAGC 1 cut(s) 259
BsgI GTGCAG 1 cut(s) 1191
BshFI GGCC 4 cut(s) 236, 289, 456, 1196
BshVI ATCGAT 1 cut(s) 799
BsiHKCI CYCGRG 2 cut(s) 89, 1197
BsiSI CCGG 3 cut(s) 90, 457, 890
BslI CCNNNNNNNGG 3 cut(s) 371, 447, 1001
BsmAI GTCTC 4 cut(s) 212, 420, 441, 882
BsmBI CGTCTC 1 cut(s) 212
BsmI GAATGC 1 cut(s) 317
BsnI GGCC 4 cut(s) 236, 289, 456, 1196
BsoBI CYCGRG 2 cut(s) 89, 1197
Bsp119I TTCGAA 1 cut(s) 967
Bsp1407I TGTACA 1 cut(s) 62
Bsp143I GATC 5 cut(s) 146, 331, 505, 817, 1078
BspACI CCGC 2 cut(s) 4, 976
BspANI GGCC 4 cut(s) 236, 289, 456, 1196
BspCNI CTCAG 1 cut(s) 205
BspDI ATCGAT 1 cut(s) 799
BspHI TCATGA 1 cut(s) 471
BspMI ACCTGC 3 cut(s) 382, 1055, 1074
BspPI GGATC 2 cut(s) 154, 825
BspQI GCTCTTC 1 cut(s) 1130
BspT104I TTCGAA 1 cut(s) 967
BsrDI GCAATG 1 cut(s) 33
BsrFI RCCGGY 1 cut(s) 456
BsrGI TGTACA 1 cut(s) 62
BsrI ACTGG 2 cut(s) 230, 1064
BssAI RCCGGY 1 cut(s) 456
BssECI CCNNGG 2 cut(s) 89, 1198
BssMI GATC 5 cut(s) 146, 331, 505, 817, 1078
BssSI CACGAG 1 cut(s) 687
Bst2BI CACGAG 1 cut(s) 687
Bst2UI CCWGG 2 cut(s) 366, 996
Bst4CI ACNGT 6 cut(s) 103, 127, 435, 764, 864, 1025
Bst6I CTCTTC 2 cut(s) 336, 1130
BstAUI TGTACA 1 cut(s) 62
BstBAI YACGTR 1 cut(s) 1131
BstBI TTCGAA 1 cut(s) 967
BstC8I GCNNGC 3 cut(s) 24, 169, 741
BstDEI CTNAG 3 cut(s) 172, 192, 465
BstF5I GGATG 4 cut(s) 13, 24, 49, 148
BstKTI GATC 5 cut(s) 149, 334, 508, 820, 1081
BstMAI GTCTC 4 cut(s) 212, 420, 441, 882
BstMBI GATC 5 cut(s) 146, 331, 505, 817, 1078
BstMWI GCNNNNNNNGC 2 cut(s) 233, 1061
BstNI CCWGG 2 cut(s) 366, 996
BstSCI CCNGG 4 cut(s) 88, 89, 364, 994
BstV1I GCAGC 1 cut(s) 259
Bsu15I ATCGAT 1 cut(s) 799
BsuI GTATCC 1 cut(s) 1037
BsuRI GGCC 4 cut(s) 236, 289, 456, 1196
BsuTUI ATCGAT 1 cut(s) 799
BtsCI GGATG 4 cut(s) 13, 24, 49, 148
BtsIMutI CAGTG 2 cut(s) 237, 536
BveI ACCTGC 3 cut(s) 382, 1055, 1074
Cac8I GCNNGC 3 cut(s) 24, 169, 741
CciI TCATGA 1 cut(s) 471
Cfr10I RCCGGY 1 cut(s) 456
Cfr13I GGNCC 2 cut(s) 1086, 1195
Cfr9I CCCGGG 1 cut(s) 89
ClaI ATCGAT 1 cut(s) 799
Csp6I GTAC 5 cut(s) 63, 160, 257, 375, 824
CviAII CATG 5 cut(s) 66, 326, 338, 472, 571
CviQI GTAC 5 cut(s) 63, 160, 257, 375, 824
DdeI CTNAG 3 cut(s) 172, 192, 465
DpnI GATC 5 cut(s) 148, 333, 507, 819, 1080
DpnII GATC 5 cut(s) 146, 331, 505, 817, 1078
DraI TTTAAA 2 cut(s) 660, 984
EaeI YGGCCR 2 cut(s) 234, 454
Eam1104I CTCTTC 2 cut(s) 336, 1130
EarI CTCTTC 2 cut(s) 336, 1130
Eco47I GGWCC 1 cut(s) 1086
Eco88I CYCGRG 2 cut(s) 89, 1197
EcoRII CCWGG 2 cut(s) 364, 994
EcoT22I ATGCAT 2 cut(s) 319, 933
Esp3I CGTCTC 1 cut(s) 212
FaeI CATG 5 cut(s) 69, 329, 341, 475, 574
FatI CATG 5 cut(s) 65, 325, 337, 471, 570
FauNDI CATATG 1 cut(s) 951
FbaI TGATCA 1 cut(s) 505
Fnu4HI GCNGC 1 cut(s) 273
FokI GGATG 4 cut(s) 20, 31, 56, 155
Fsp4HI GCNGC 1 cut(s) 273
FspBI CTAG 6 cut(s) 731, 885, 939, 1031, 1167, 1252
GluI GCNGC 1 cut(s) 273
GsuI CTGGAG 1 cut(s) 978
HaeIII GGCC 4 cut(s) 236, 289, 456, 1196
HapII CCGG 3 cut(s) 90, 457, 890
Hin1II CATG 5 cut(s) 69, 329, 341, 475, 574
HincII GTYRAC 1 cut(s) 767
HindII GTYRAC 1 cut(s) 767
HinfI GANTC 2 cut(s) 601, 712
HpaII CCGG 3 cut(s) 90, 457, 890
HphI GGTGA 3 cut(s) 341, 596, 928
Hpy166II GTNNAC 6 cut(s) 123, 154, 208, 462, 767, 1089
Hpy188I TCNGA 5 cut(s) 142, 195, 429, 505, 631
Hpy188III TCNNGA 6 cut(s) 50, 281, 472, 731, 1031, 1041
Hpy8I GTNNAC 6 cut(s) 123, 154, 208, 462, 767, 1089
HpyAV CCTTC 1 cut(s) 688
HpyCH4III ACNGT 6 cut(s) 103, 127, 435, 764, 864, 1025
HpyCH4IV ACGT 2 cut(s) 221, 1130
HpyCH4V TGCA 9 cut(s) 22, 227, 295, 317, 325, 337, 905, 931, 1172
HpyF10VI GCNNNNNNNGC 2 cut(s) 233, 1061
HpyF3I CTNAG 3 cut(s) 172, 192, 465
HpySE526I ACGT 2 cut(s) 221, 1130
Hsp92II CATG 5 cut(s) 69, 329, 341, 475, 574
Ksp22I TGATCA 1 cut(s) 505
Kzo9I GATC 5 cut(s) 146, 331, 505, 817, 1078
LguI GCTCTTC 1 cut(s) 1130
LmnI GCTCC 1 cut(s) 997
Lsp1109I GCAGC 1 cut(s) 259
LweI GCATC 3 cut(s) 9, 34, 1042
MaeI CTAG 6 cut(s) 731, 885, 939, 1031, 1167, 1252
MaeII ACGT 2 cut(s) 221, 1130
MaeIII GTNAC 4 cut(s) 541, 577, 1118, 1126
MalI GATC 5 cut(s) 148, 333, 507, 819, 1080
MboI GATC 5 cut(s) 146, 331, 505, 817, 1078
MboII GAAGA 6 cut(s) 67, 353, 421, 487, 618, 1147
MlsI TGGCCA 1 cut(s) 236
MluNI TGGCCA 1 cut(s) 236
MlyI GAGTC 1 cut(s) 721
MmeI TCCRAC 1 cut(s) 838
MnlI CCTC 7 cut(s) 337, 372, 391, 589, 937, 1181, 1193
Mox20I TGGCCA 1 cut(s) 236
Mph1103I ATGCAT 2 cut(s) 319, 933
MscI TGGCCA 1 cut(s) 236
MseI TTAA 6 cut(s) 243, 309, 522, 659, 983, 1007
MslI CAYNNNNRTG 5 cut(s) 531, 575, 954, 1032, 1109
Msp20I TGGCCA 1 cut(s) 236
MspI CCGG 3 cut(s) 90, 457, 890
MspR9I CCNGG 4 cut(s) 90, 91, 366, 996
Mva1269I GAATGC 1 cut(s) 317
MvaI CCWGG 2 cut(s) 366, 996
MwoI GCNNNNNNNGC 2 cut(s) 233, 1061
NciI CCSGG 2 cut(s) 90, 91
NdeI CATATG 1 cut(s) 951
NdeII GATC 5 cut(s) 146, 331, 505, 817, 1078
NlaIII CATG 5 cut(s) 69, 329, 341, 475, 574
NmuCI GTSAC 2 cut(s) 541, 577
NsiI ATGCAT 2 cut(s) 319, 933
NspV TTCGAA 1 cut(s) 967
OliI CACNNNNGTG 1 cut(s) 1109
PagI TCATGA 1 cut(s) 471
PaqCI CACCTGC 1 cut(s) 382
PciSI GCTCTTC 1 cut(s) 1130
PctI GAATGC 1 cut(s) 317
PfeI GAWTC 1 cut(s) 601
PflMI CCANNNNNTGG 1 cut(s) 447
PfoI TCCNGGA 2 cut(s) 364, 994
PkrI GCNGC 1 cut(s) 274
PleI GAGTC 1 cut(s) 720
PpsI GAGTC 1 cut(s) 720
Ppu21I YACGTR 1 cut(s) 1131
PshBI ATTAAT 1 cut(s) 1007
Psp6I CCWGG 2 cut(s) 364, 994
PspGI CCWGG 2 cut(s) 364, 994
PspPI GGNCC 2 cut(s) 1086, 1195
RsaI GTAC 5 cut(s) 64, 161, 258, 376, 825
RsaNI GTAC 5 cut(s) 63, 160, 257, 375, 824
RseI CAYNNNNRTG 5 cut(s) 531, 575, 954, 1032, 1109
SapI GCTCTTC 1 cut(s) 1130
SaqAI TTAA 6 cut(s) 243, 309, 522, 659, 983, 1007
SatI GCNGC 1 cut(s) 273
Sau3AI GATC 5 cut(s) 146, 331, 505, 817, 1078
Sau96I GGNCC 2 cut(s) 1086, 1195
SchI GAGTC 1 cut(s) 721
ScrFI CCNGG 4 cut(s) 90, 91, 366, 996
SfaNI GCATC 3 cut(s) 9, 34, 1042
SfuI TTCGAA 1 cut(s) 967
SinI GGWCC 1 cut(s) 1086
SmaI CCCGGG 1 cut(s) 91
SmiMI CAYNNNNRTG 5 cut(s) 531, 575, 954, 1032, 1109
SmlI CTYRAG 1 cut(s) 50
SmoI CTYRAG 1 cut(s) 50
SsiI CCGC 2 cut(s) 4, 976
SspI AATATT 2 cut(s) 665, 1072
SspMI CTAG 6 cut(s) 731, 885, 939, 1031, 1167, 1252
StyD4I CCNGG 4 cut(s) 88, 89, 364, 994
TaaI ACNGT 6 cut(s) 103, 127, 435, 764, 864, 1025
TaiI ACGT 2 cut(s) 224, 1133
TaqI TCGA 5 cut(s) 36, 490, 786, 799, 967
TatI WGTACW 1 cut(s) 62
TfiI GAWTC 1 cut(s) 601
Tru1I TTAA 6 cut(s) 243, 309, 522, 659, 983, 1007
Tru9I TTAA 6 cut(s) 243, 309, 522, 659, 983, 1007
TscAI CASTG 2 cut(s) 237, 536
TseFI GTSAC 2 cut(s) 541, 577
TseI GCWGC 1 cut(s) 272
Tsp45I GTSAC 2 cut(s) 541, 577
TspDTI ATGAA 4 cut(s) 354, 460, 488, 656
TspMI CCCGGG 1 cut(s) 89
TspRI CASTG 2 cut(s) 237, 536
Van91I CCANNNNNTGG 1 cut(s) 447
VpaK11BI GGWCC 1 cut(s) 1086
VspI ATTAAT 1 cut(s) 1007
XapI RAATTY 3 cut(s) 632, 969, 1228
XbaI TCTAGA 2 cut(s) 730, 1030
XcmI CCANNNNNNNNNTGG 1 cut(s) 854
XmaI CCCGGG 1 cut(s) 89
XspI CTAG 6 cut(s) 731, 885, 939, 1031, 1167, 1252
Zsp2I ATGCAT 2 cut(s) 319, 933
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.