Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0000071

Physical Location & Seq

Genomic Coordinates Forward (+)

8820909 .. 8822561

Gene Structure 1653 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g15611.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1653 bp

ATGAATGTACCTAAGAGTTTCTGGTCTCAAAGTGTGCTCACTGCTACTTATCTCATCAATCGTCTGCCTAATAGAGTACTTGGTGGTAAGTCCCCTCTTGAAGTGTTGAAAAGAAGGAAGATTGATATCTCTCACCTGAGAGTATTTGGTTGTGTTTGTTTTGTTCACATACAAGCTAAACAAAGAGGGAAACTTGATCCTCAGGCTGAAAAGTGTGTGTTTTTAGGATATTCATCCACTCAAAAGGGTTACAAATGCTACAACCCCTCTTCTAAAAAGATCATTGTCTCCAGGGATGTTAGATTCGATGAGAATACTTCTTTCTTTGCTGGGAAATCAGATGGTTACAGTCAGGGGGAGTCTTTATTTGATCTGTTTCCAACTCCCAATCTTCCTGTCAATGAGGATAGTAGACAGTCTTTCCATCATACTGCTTCAGTTCCAGCTTCAAGTTTCAGTCATCCTGTTGTTGGGGATTCCAGTCAGCATTCCTATCCTACTGCTCCGGTTTCAGAAGTTCTGGCAGTGCCTCCAAATCCAGATGTTGACCAATCTGAATTACCTGTGCAACCTGTTGTTGAGCCTCTTTCTCCACCTCCAACTATACCTCGTAGAAATCCTACGCGAGTACGAGGTCCTCCATCAAAGCTCCAAGATTACGTGACATATGCTGCGAGGTATCCAATGACTGCCTTCATCTCTTATAAAAGGTTCTCTTCTGCTCATTTTGCTTTTCTCAGCACCCTTGATGCTACTCATGAACCTCAAAGCTTTGATGAAGCAAATCAATATGAAGTGTGGAAACAGGCTATGACAGATGAAATTCAAGCCCTTAATGAGAATAAAACATGGAGTGTGGTTAAGATTCCTCAAGGGAAGAAGGCAGTAGGCAGTAGATGGGTGTATAAGACCAAGTTTCACTCAGATGGCACTGTAGAAAGACATAAGGCTCGATTGGTAGCTAGGGGTTTCACTCAAACCTATGGAGTTGATTACAAAGAAACCTTTGCTCCTGTTGCAAAAATGAGTACTGTTAGGGTTCTTCTTTCGGTTGCTGTGAATCATGGTTGGCCTCTTTTTCAAATGGATGTGAAGAATGCTTTTCTACATGGTGATCTTGAAGAGGAGGTTTATATGAAATTGCCTCCTAGTCACCCTCAATCTTCTGATCCTAATATGGTATGCAAACTTCACAAAGCCATTTACGGCTTGAAACAATCTCCTCGAGCTTGGTATGCCAAGCTTAGTTCTGTGCTTGAAGAAGTTGGTTTTCATAGCAGCAATGCAGATTCCTCATTATTTGTTCGAATTGGTTCAACAAGTAAGCTTGTGGTGCTTATTTATGTTGATGATTTAATTGTGACAGGTGATAATCTAGAAGAGATTAATGTTCTCAAGCACTCTCTTCGTTGCAAGTTTGCTATTAAGCATTTGGGGTGTCTTAAGTACTTCCTTGGTATAGAAATGGCTACTTCTCATAAAGGATTGTTTCTAAATCAAAGGAAGTATGTTCTTGATTTGCTGAAAGAGTCAGAGTTGTGGGACAGCAAGCCTACTAGCACTCCCCTTGACAATAAGTGGGATAGCAAGCCTGCCAACACTCCTCTGGACAGCAAGCTTCAGTTTGATACTTTTAAGTCATTTTCTCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002009 GO:0002165 GO:0003002 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0007154 GO:0007165 GO:0007166 GO:0007219 GO:0007275 GO:0007389 GO:0007444 GO:0007447 GO:0007450 GO:0007472 GO:0007476 GO:0007552 GO:0007560 GO:0008150 GO:0008587 GO:0009653 GO:0009791 GO:0009886 GO:0009887 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009953 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0035107 GO:0035114 GO:0035120 GO:0035220 GO:0035222 GO:0035239 GO:0035295 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0048190 GO:0048513 GO:0048518 GO:0048522 GO:0048563 GO:0048569 GO:0048707 GO:0048729 GO:0048731 GO:0048736 GO:0048737 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0060429 GO:0060562 GO:0065007 GO:0080090 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA_34 Helicase_C_4 PHD

Protein Analysis

551

Amino Acids

61.96

Weight (kDa)

9.15

Isoelectric Point (pI)

47.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SH3_retrovirus	PF25597	51 - 110	2.6e-29	Retroviral polymerase SH3-like domain
RVT_2	PF07727	281 - 523	1.7e-77	Reverse transcriptase (RNA-dependent DNA polymerase)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000071)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G23160 AT4G23160
fragaria_vesca	FvH4_2g08111 FvH4_2g17332 FvH4_2g18071 FvH4_2g20531 FvH4_2g20842 FvH4_2g20842 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g23401 FvH4_2g24231 FvH4_2g24232 FvH4_3g00831 FvH4_3g00831 FvH4_3g03561 FvH4_3g03561 FvH4_3g10282 FvH4_3g18165 FvH4_3g19021 FvH4_3g24071 FvH4_3g33123 FvH4_3g33970 FvH4_3g38851 FvH4_3g39133 FvH4_3g39271 FvH4_4g00981 FvH4_4g08191 FvH4_4g08311 FvH4_4g08311 FvH4_4g08311 FvH4_4g09341 FvH4_4g12550 FvH4_4g12550 FvH4_4g12550 FvH4_4g13391 FvH4_4g14842 FvH4_4g27901 FvH4_5g11561 FvH4_5g15611 FvH4_5g17991 FvH4_5g27871 FvH4_5g29995 FvH4_5g39662 FvH4_6g02392 FvH4_6g12781 FvH4_6g20106 FvH4_6g20106 FvH4_6g20106 FvH4_6g30872 FvH4_6g34901 FvH4_6g35632 FvH4_6g36661 FvH4_6g43795 FvH4_6g44611 FvH4_7g01791 FvH4_7g04041 FvH4_7g12551 FvH4_7g23351
malus_domestica	MD00G1134200.v1.1 MD01G1096500.v1.1 MD01G1128200.v1.1 MD02G1250500.v1.1 MD02G1294900.v1.1 MD03G1121800.v1.1 MD04G1021400.v1.1 MD04G1051100.v1.1 MD04G1051300.v1.1 MD04G1099000.v1.1 MD05G1047900.v1.1 MD05G1298000.v1.1 MD06G1064200.v1.1 MD06G1120600.v1.1 MD07G1013900.v1.1 MD09G1226900.v1.1 MD10G1196700.v1.1 MD10G1307000.v1.1 MD10G1338900.v1.1 MD11G1107300.v1.1 MD11G1138300.v1.1 MD11G1236700.v1.1 MD12G1032500.v1.1 MD12G1150100.v1.1 MD12G1247800.v1.1 MD17G1267900.v1.1
pyrus_communis	pycom02g03660 pycom02g13370 pycom02g14840 pycom02g18400 pycom02g18880 pycom02g22740 pycom04g08800 pycom04g15770 pycom05g07980 pycom05g19640 pycom06g09360 pycom07g13160 pycom08g11820 pycom08g21740 pycom09g19980 pycom10g04810 pycom10g05420 pycom10g14650 pycom11g03140 pycom11g21550 pycom12g14740 pycom13g01600 pycom13g29510 pycom14g07060 pycom15g01990 pycom15g19850 pycom15g30860 pycom16g15290 pycom16g16250 pycom16g25390 pycom17g17270 pycom520g00070
rosa_chinensis	RchiOBHm_Chr1g0316691 RchiOBHm_Chr1g0320751 RchiOBHm_Chr1g0320771 RchiOBHm_Chr1g0322231 RchiOBHm_Chr1g0322861 RchiOBHm_Chr1g0328471 RchiOBHm_Chr1g0333321 RchiOBHm_Chr1g0337871 RchiOBHm_Chr1g0339051 RchiOBHm_Chr1g0349861 RchiOBHm_Chr1g0361951 RchiOBHm_Chr1g0365931 RchiOBHm_Chr1g0365981 RchiOBHm_Chr1g0377711 RchiOBHm_Chr1g0381581 RchiOBHm_Chr1g0382741 RchiOBHm_Chr1g0383501 RchiOBHm_Chr2g0101201 RchiOBHm_Chr2g0113601 RchiOBHm_Chr2g0124031 RchiOBHm_Chr2g0135481 RchiOBHm_Chr2g0148361 RchiOBHm_Chr2g0150101 RchiOBHm_Chr2g0154181 RchiOBHm_Chr2g0156071 RchiOBHm_Chr2g0166521 RchiOBHm_Chr2g0166821 RchiOBHm_Chr3g0448011 RchiOBHm_Chr3g0450941 RchiOBHm_Chr3g0450961 RchiOBHm_Chr3g0451051 RchiOBHm_Chr3g0451721 RchiOBHm_Chr3g0453371 RchiOBHm_Chr3g0454881 RchiOBHm_Chr3g0457421 RchiOBHm_Chr3g0457661 RchiOBHm_Chr3g0460011 RchiOBHm_Chr3g0461531 RchiOBHm_Chr3g0461981 RchiOBHm_Chr3g0463471 RchiOBHm_Chr3g0466641 RchiOBHm_Chr3g0468181 RchiOBHm_Chr3g0483351 RchiOBHm_Chr4g0394001 RchiOBHm_Chr4g0397261 RchiOBHm_Chr4g0404531 RchiOBHm_Chr4g0410841 RchiOBHm_Chr4g0415501 RchiOBHm_Chr4g0425221 RchiOBHm_Chr4g0430811 RchiOBHm_Chr5g0010831 RchiOBHm_Chr5g0016831 RchiOBHm_Chr5g0016851 RchiOBHm_Chr5g0031351 RchiOBHm_Chr5g0032151 RchiOBHm_Chr5g0041201 RchiOBHm_Chr5g0042191 RchiOBHm_Chr5g0064121 RchiOBHm_Chr5g0066601 RchiOBHm_Chr5g0078371 RchiOBHm_Chr5g0079271 RchiOBHm_Chr6g0263751 RchiOBHm_Chr6g0285111 RchiOBHm_Chr6g0298961 RchiOBHm_Chr6g0300481 RchiOBHm_Chr6g0303211 RchiOBHm_Chr7g0192341 RchiOBHm_Chr7g0196171 RchiOBHm_Chr7g0200281 RchiOBHm_Chr7g0200551 RchiOBHm_Chr7g0207611 RchiOBHm_Chr7g0212421 RchiOBHm_Chr7g0214991 RchiOBHm_Chr7g0219211 RchiOBHm_Chr7g0242371
rosa_laevigata	RLG00000002389 RLG00000007980
rosa_roxburghii	Rroxscaffold_1G00053480 Rroxscaffold_2G00090890 Rroxscaffold_2G00099660 Rroxscaffold_2G00134510 Rroxscaffold_3G00221450 Rroxscaffold_3G00240550 Rroxscaffold_4G00305710 Rroxscaffold_4G00306360 Rroxscaffold_4G00306800 Rroxscaffold_4G00329090 Rroxscaffold_5G00382750 Rroxscaffold_5G00385900 Rroxscaffold_6G00403080 Rroxscaffold_7G00172890 Rroxscaffold_7G00186690
rosa_samantha	Rh1DG425600
rosa_wichuraiana	Rw0G001640 Rw0G009160 Rw0G010480 Rw0G010520 Rw0G013850 Rw0G017170 Rw0G018520 Rw0G019280 Rw0G022780 Rw1G000360 Rw1G001410 Rw1G001630 Rw1G002100 Rw1G006810 Rw1G010680 Rw1G012700 Rw1G016160 Rw1G022180 Rw1G023580 Rw1G025640 Rw1G026310 Rw1G027230 Rw1G028110 Rw1G034180 Rw2G004990 Rw2G005840 Rw2G007350 Rw2G024730 Rw2G025580 Rw2G026670 Rw2G027210 Rw2G029060 Rw2G031560 Rw2G042190 Rw2G043850 Rw2G045990 Rw2G046130 Rw2G049290 Rw2G049310 Rw2G049790 Rw2G052250 Rw3G004350 Rw3G013100 Rw3G015280 Rw3G015720 Rw3G024630 Rw3G026470 Rw3G027840 Rw3G028960 Rw3G029130 Rw3G029160 Rw4G000280 Rw4G006650 Rw4G008970 Rw4G009310 Rw4G011730 Rw4G012000 Rw4G012610 Rw4G014300 Rw4G014690 Rw4G015190 Rw4G016470 Rw4G020750 Rw4G025060 Rw4G025080 Rw5G005610 Rw5G010380 Rw5G013970 Rw5G015130 Rw5G015250 Rw5G017640 Rw5G019910 Rw5G022410 Rw5G023550 Rw5G029710 Rw5G037650 Rw5G038280 Rw5G038570 Rw5G041550 Rw5G042600 Rw5G043910 Rw5G047850 Rw5G048200 Rw5G049920 Rw6G000260 Rw6G000530 Rw6G001710 Rw6G005090 Rw6G006730 Rw6G009310 Rw6G010950 Rw6G011630 Rw6G012080 Rw6G012750 Rw6G015970 Rw6G020700 Rw6G024350 Rw7G008540 Rw7G016620 Rw7G019400 Rw7G020010 Rw7G024240 Rw7G025630 Rw7G027550 Rw7G027770 Rw7G027960 Rw7G028450 Rw7G031280 Rw7G031970 Rw7G032180 Rw7G033590 Rw7G033720 Rw7G033890 Rw7G041800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	705
AccI	GTMKAC	1 cut(s)	412
AccII	CGCG	1 cut(s)	625
AclWI	GGATC	2 cut(s)	191, 1163
AcsI	RAATTY	1 cut(s)	822
AcuI	CTGAAG	2 cut(s)	420, 1604
AfaI	GTAC	5 cut(s)	9, 78, 630, 1030, 1448
AfiI	CCNNNNNNNGG	1 cut(s)	470
AflII	CTTAAG	1 cut(s)	1442
AgsI	TTSAA	9 cut(s)	101, 109, 450, 827, 1082, 1121, 1213, 1259, 1317
AjnI	CCWGG	1 cut(s)	290
AluBI	AGCT	9 cut(s)	176, 446, 649, 771, 962, 1229, 1243, 1327, 1618
AluI	AGCT	9 cut(s)	176, 446, 649, 771, 962, 1229, 1243, 1327, 1618
Alw21I	GWGCWC	1 cut(s)	39
Alw26I	GTCTC	2 cut(s)	30, 292
AlwI	GGATC	2 cut(s)	191, 1163
Ama87I	CYCGRG	1 cut(s)	1224
AoxI	GGCC	1 cut(s)	1070
ApeKI	GCWGC	2 cut(s)	671, 1278
ApoI	RAATTY	1 cut(s)	822
AseI	ATTAAT	1 cut(s)	1386
Asp700I	GAANNNNTTC	1 cut(s)	1312
AspS9I	GGNCC	1 cut(s)	635
AsuHPI	GGTGA	4 cut(s)	125, 1124, 1145, 1379
AsuII	TTCGAA	1 cut(s)	1306
AvaI	CYCGRG	1 cut(s)	1224
AvaII	GGWCC	1 cut(s)	635
AxyI	CCTNAGG	1 cut(s)	201
BarI	GAAGNNNNNNTAC	2 cut(s)	1173, 1205
Bbv12I	GWGCWC	1 cut(s)	39
BbvI	GCAGC	2 cut(s)	658, 1290
BccI	CCATC	5 cut(s)	335, 432, 649, 891, 920
BceAI	ACGGC	1 cut(s)	1222
BcgI	CGANNNNNNTGC	2 cut(s)	1388, 1422
BciT130I	CCWGG	1 cut(s)	292
BciVI	GTATCC	1 cut(s)	690
BcoDI	GTCTC	2 cut(s)	30, 292
BfaI	CTAG	4 cut(s)	963, 1149, 1376, 1557
BfmI	CTRYAG	1 cut(s)	933
BfrI	CTTAAG	1 cut(s)	1442
BfuI	GTATCC	1 cut(s)	690
BisI	GCNGC	2 cut(s)	672, 1279
BlsI	GCNGC	2 cut(s)	673, 1280
BmcAI	AGTACT	3 cut(s)	78, 1030, 1448
Bme1390I	CCNGG	1 cut(s)	292
Bme18I	GGWCC	1 cut(s)	635
BmeT110I	CYCGRG	1 cut(s)	1224
BmgT120I	GGNCC	1 cut(s)	635
BmrFI	CCNGG	1 cut(s)	292
BmsI	GCATC	1 cut(s)	739
BpmI	CTGGAG	1 cut(s)	274
Bpu14I	TTCGAA	1 cut(s)	1306
BpuEI	CTTGAG	2 cut(s)	855, 1379
BsaAI	YACGTR	1 cut(s)	661
BsaBI	GATNNNNATC	2 cut(s)	125, 232
BsaI	GGTCTC	1 cut(s)	30
BsaJI	CCNNGG	2 cut(s)	291, 1453
BsaWI	WCCGGW	1 cut(s)	505
BsaXI	ACNNNNNCTCC	4 cut(s)	994, 1024, 1546, 1576
Bsc4I	CCNNNNNNNGG	1 cut(s)	470
Bse1I	ACTGG	1 cut(s)	480
Bse21I	CCTNAGG	1 cut(s)	201
Bse3DI	GCAATG	1 cut(s)	1288
Bse8I	GATNNNNATC	2 cut(s)	125, 232
BseBI	CCWGG	1 cut(s)	292
BseDI	CCNNGG	2 cut(s)	291, 1453
BseGI	GGATG	4 cut(s)	233, 301, 460, 1093
BseJI	GATNNNNATC	2 cut(s)	125, 232
BseLI	CCNNNNNNNGG	1 cut(s)	470
BseMI	GCAATG	1 cut(s)	1288
BseMII	CTCAG	4 cut(s)	128, 215, 751, 936
BseNI	ACTGG	1 cut(s)	480
BseRI	GAGGAG	3 cut(s)	1139, 1212, 1593
BseXI	GCAGC	2 cut(s)	658, 1290
BseYI	CCCAGC	1 cut(s)	329
Bsh1236I	CGCG	1 cut(s)	625
BshFI	GGCC	1 cut(s)	1072
BsiHKAI	GWGCWC	1 cut(s)	39
BsiHKCI	CYCGRG	1 cut(s)	1224
BsiSI	CCGG	1 cut(s)	506
BslFI	GGGAC	2 cut(s)	76, 1556
BslI	CCNNNNNNNGG	1 cut(s)	470
BsmAI	GTCTC	2 cut(s)	30, 292
BsmFI	GGGAC	2 cut(s)	76, 1556
BsmI	GAATGC	2 cut(s)	487, 1102
BsnI	GGCC	1 cut(s)	1072
Bso31I	GGTCTC	1 cut(s)	30
BsoBI	CYCGRG	1 cut(s)	1224
Bsp119I	TTCGAA	1 cut(s)	1306
Bsp1286I	GDGCHC	1 cut(s)	39
Bsp143I	GATC	5 cut(s)	196, 279, 370, 1114, 1168
BspANI	GGCC	1 cut(s)	1072
BspCNI	CTCAG	4 cut(s)	129, 214, 750, 935
BspFNI	CGCG	1 cut(s)	625
BspHI	TCATGA	1 cut(s)	757
BspPI	GGATC	2 cut(s)	191, 1163
BspT104I	TTCGAA	1 cut(s)	1306
BspTI	CTTAAG	1 cut(s)	1442
BspTNI	GGTCTC	1 cut(s)	30
BsrDI	GCAATG	1 cut(s)	1288
BsrI	ACTGG	1 cut(s)	480
BssECI	CCNNGG	2 cut(s)	291, 1453
BssMI	GATC	5 cut(s)	196, 279, 370, 1114, 1168
BssT1I	CCWWGG	1 cut(s)	1453
Bst2UI	CCWGG	1 cut(s)	292
Bst4CI	ACNGT	4 cut(s)	350, 417, 934, 1033
Bst6I	CTCTTC	5 cut(s)	274, 721, 1116, 1374, 1410
BstAFI	CTTAAG	1 cut(s)	1442
BstBAI	YACGTR	1 cut(s)	661
BstBI	TTCGAA	1 cut(s)	1306
BstC8I	GCNNGC	4 cut(s)	1550, 1589, 1593, 1616
BstDEI	CTNAG	6 cut(s)	12, 137, 201, 737, 922, 1244
BstF5I	GGATG	4 cut(s)	233, 301, 460, 1093
BstFNI	CGCG	1 cut(s)	625
BstKTI	GATC	5 cut(s)	199, 282, 373, 1117, 1171
BstMAI	GTCTC	2 cut(s)	30, 292
BstMBI	GATC	5 cut(s)	196, 279, 370, 1114, 1168
BstMWI	GCNNNNNNNGC	4 cut(s)	728, 1016, 1235, 1333
BstNI	CCWGG	1 cut(s)	292
BstSCI	CCNGG	1 cut(s)	290
BstSFI	CTRYAG	1 cut(s)	933
BstUI	CGCG	1 cut(s)	625
BstV1I	GCAGC	2 cut(s)	658, 1290
Bsu36I	CCTNAGG	1 cut(s)	201
BsuI	GTATCC	1 cut(s)	690
BsuRI	GGCC	1 cut(s)	1072
BtsCI	GGATG	4 cut(s)	233, 301, 460, 1093
BtsI	GCAGTG	2 cut(s)	39, 531
BtsIMutI	CAGTG	3 cut(s)	39, 531, 930
Cac8I	GCNNGC	4 cut(s)	1550, 1589, 1593, 1616
CciI	TCATGA	1 cut(s)	757
Cfr13I	GGNCC	1 cut(s)	635
Csp6I	GTAC	5 cut(s)	8, 77, 629, 1029, 1447
CviAII	CATG	4 cut(s)	758, 849, 1064, 1109
CviQI	GTAC	5 cut(s)	8, 77, 629, 1029, 1447
DdeI	CTNAG	6 cut(s)	12, 137, 201, 737, 922, 1244
DpnI	GATC	5 cut(s)	198, 281, 372, 1116, 1170
DpnII	GATC	5 cut(s)	196, 279, 370, 1114, 1168
Eam1104I	CTCTTC	5 cut(s)	274, 721, 1116, 1374, 1410
EarI	CTCTTC	5 cut(s)	274, 721, 1116, 1374, 1410
Eco130I	CCWWGG	1 cut(s)	1453
Eco31I	GGTCTC	1 cut(s)	30
Eco32I	GATATC	1 cut(s)	127
Eco47I	GGWCC	1 cut(s)	635
Eco57I	CTGAAG	2 cut(s)	420, 1604
Eco81I	CCTNAGG	1 cut(s)	201
Eco88I	CYCGRG	1 cut(s)	1224
EcoO109I	RGGNCCY	1 cut(s)	635
EcoRII	CCWGG	1 cut(s)	290
EcoRV	GATATC	1 cut(s)	127
EcoT14I	CCWWGG	1 cut(s)	1453
ErhI	CCWWGG	1 cut(s)	1453
FaeI	CATG	4 cut(s)	761, 852, 1067, 1112
FalI	AAGNNNNNCTT	2 cut(s)	700, 732
FaqI	GGGAC	2 cut(s)	76, 1556
FatI	CATG	4 cut(s)	757, 848, 1063, 1108
FauNDI	CATATG	1 cut(s)	667
FblI	GTMKAC	1 cut(s)	412
Fnu4HI	GCNGC	2 cut(s)	672, 1279
FokI	GGATG	4 cut(s)	220, 308, 447, 1100
Fsp4HI	GCNGC	2 cut(s)	672, 1279
FspBI	CTAG	4 cut(s)	963, 1149, 1376, 1557
GluI	GCNGC	2 cut(s)	672, 1279
GsaI	CCCAGC	1 cut(s)	333
GsuI	CTGGAG	1 cut(s)	274
HaeIII	GGCC	1 cut(s)	1072
HapII	CCGG	1 cut(s)	506
Hin1II	CATG	4 cut(s)	761, 852, 1067, 1112
HincII	GTYRAC	1 cut(s)	547
HindII	GTYRAC	1 cut(s)	547
HindIII	AAGCTT	4 cut(s)	769, 1241, 1325, 1616
HinfI	GANTC	7 cut(s)	303, 359, 476, 865, 1060, 1289, 1529
HpaII	CCGG	1 cut(s)	506
HphI	GGTGA	4 cut(s)	125, 1124, 1145, 1379
Hpy166II	GTNNAC	3 cut(s)	166, 413, 547
Hpy188I	TCNGA	7 cut(s)	340, 514, 556, 925, 1168, 1534, 1652
Hpy188III	TCNNGA	7 cut(s)	98, 539, 758, 1118, 1376, 1514, 1607
Hpy8I	GTNNAC	3 cut(s)	166, 413, 547
HpyAV	CCTTC	3 cut(s)	108, 703, 874
HpyCH4III	ACNGT	4 cut(s)	350, 417, 934, 1033
HpyCH4IV	ACGT	1 cut(s)	660
HpyCH4V	TGCA	5 cut(s)	568, 1019, 1185, 1286, 1413
HpyF10VI	GCNNNNNNNGC	4 cut(s)	728, 1016, 1235, 1333
HpyF3I	CTNAG	6 cut(s)	12, 137, 201, 737, 922, 1244
HpySE526I	ACGT	1 cut(s)	660
Hsp92II	CATG	4 cut(s)	761, 852, 1067, 1112
Kzo9I	GATC	5 cut(s)	196, 279, 370, 1114, 1168
LmnI	GCTCC	3 cut(s)	508, 654, 1015
Lsp1109I	GCAGC	2 cut(s)	658, 1290
LweI	GCATC	1 cut(s)	739
MaeI	CTAG	4 cut(s)	963, 1149, 1376, 1557
MaeII	ACGT	1 cut(s)	660
MaeIII	GTNAC	5 cut(s)	248, 344, 661, 1151, 1360
MalI	GATC	5 cut(s)	198, 281, 372, 1116, 1170
MboI	GATC	5 cut(s)	196, 279, 370, 1114, 1168
MhlI	GDGCHC	1 cut(s)	39
MluCI	AATT	5 cut(s)	557, 822, 1139, 1308, 1356
MlyI	GAGTC	2 cut(s)	368, 1538
MmeI	TCCRAC	2 cut(s)	404, 623
MroXI	GAANNNNTTC	1 cut(s)	1312
MseI	TTAA	7 cut(s)	834, 861, 1355, 1386, 1425, 1443, 1635
MslI	CAYNNNNRTG	1 cut(s)	924
MspCI	CTTAAG	1 cut(s)	1442
MspI	CCGG	1 cut(s)	506
MspR9I	CCNGG	1 cut(s)	292
Mva1269I	GAATGC	2 cut(s)	487, 1102
MvaI	CCWGG	1 cut(s)	292
MvnI	CGCG	1 cut(s)	625
MwoI	GCNNNNNNNGC	4 cut(s)	728, 1016, 1235, 1333
NdeI	CATATG	1 cut(s)	667
NdeII	GATC	5 cut(s)	196, 279, 370, 1114, 1168
NlaIII	CATG	4 cut(s)	761, 852, 1067, 1112
NmuCI	GTSAC	3 cut(s)	661, 1151, 1360
NspV	TTCGAA	1 cut(s)	1306
PaeR7I	CTCGAG	1 cut(s)	1224
PagI	TCATGA	1 cut(s)	757
PctI	GAATGC	2 cut(s)	487, 1102
PdmI	GAANNNNTTC	1 cut(s)	1312
PfeI	GAWTC	5 cut(s)	303, 476, 865, 1060, 1289
PkrI	GCNGC	2 cut(s)	673, 1280
PleI	GAGTC	2 cut(s)	367, 1537
PpsI	GAGTC	2 cut(s)	367, 1537
Ppu21I	YACGTR	1 cut(s)	661
PpuMI	RGGWCCY	1 cut(s)	635
PshBI	ATTAAT	1 cut(s)	1386
PsiI	TTATAA	1 cut(s)	705
Psp5II	RGGWCCY	1 cut(s)	635
Psp6I	CCWGG	1 cut(s)	290
PspFI	CCCAGC	1 cut(s)	329
PspGI	CCWGG	1 cut(s)	290
PspPI	GGNCC	1 cut(s)	635
PspPPI	RGGWCCY	1 cut(s)	635
PspXI	VCTCGAGB	1 cut(s)	1224
RsaI	GTAC	5 cut(s)	9, 78, 630, 1030, 1448
RsaNI	GTAC	5 cut(s)	8, 77, 629, 1029, 1447
RseI	CAYNNNNRTG	1 cut(s)	924
SaqAI	TTAA	7 cut(s)	834, 861, 1355, 1386, 1425, 1443, 1635
SatI	GCNGC	2 cut(s)	672, 1279
Sau3AI	GATC	5 cut(s)	196, 279, 370, 1114, 1168
Sau96I	GGNCC	1 cut(s)	635
ScaI	AGTACT	3 cut(s)	78, 1030, 1448
SchI	GAGTC	2 cut(s)	368, 1538
ScrFI	CCNGG	1 cut(s)	292
SduI	GDGCHC	1 cut(s)	39
SfaNI	GCATC	1 cut(s)	739
SfcI	CTRYAG	1 cut(s)	933
Sfr274I	CTCGAG	1 cut(s)	1224
SfuI	TTCGAA	1 cut(s)	1306
SinI	GGWCC	1 cut(s)	635
SlaI	CTCGAG	1 cut(s)	1224
SmiMI	CAYNNNNRTG	1 cut(s)	924
SmlI	CTYRAG	4 cut(s)	870, 1224, 1394, 1442
SmoI	CTYRAG	4 cut(s)	870, 1224, 1394, 1442
Sse9I	AATT	5 cut(s)	557, 822, 1139, 1308, 1356
SspMI	CTAG	4 cut(s)	963, 1149, 1376, 1557
StyD4I	CCNGG	1 cut(s)	290
StyI	CCWWGG	1 cut(s)	1453
TaaI	ACNGT	4 cut(s)	350, 417, 934, 1033
TaiI	ACGT	1 cut(s)	663
TaqI	TCGA	4 cut(s)	306, 952, 1225, 1306
TasI	AATT	5 cut(s)	557, 822, 1139, 1308, 1356
TatI	WGTACW	3 cut(s)	76, 1028, 1446
TfiI	GAWTC	5 cut(s)	303, 476, 865, 1060, 1289
Tru1I	TTAA	7 cut(s)	834, 861, 1355, 1386, 1425, 1443, 1635
Tru9I	TTAA	7 cut(s)	834, 861, 1355, 1386, 1425, 1443, 1635
TscAI	CASTG	3 cut(s)	46, 531, 937
TseFI	GTSAC	3 cut(s)	661, 1151, 1360
TseI	GCWGC	2 cut(s)	671, 1278
Tsp45I	GTSAC	3 cut(s)	661, 1151, 1360
TspDTI	ATGAA	9 cut(s)	17, 222, 685, 774, 792, 807, 834, 1151, 1262
TspRI	CASTG	3 cut(s)	46, 531, 937
Vha464I	CTTAAG	1 cut(s)	1442
VpaK11BI	GGWCC	1 cut(s)	635
VspI	ATTAAT	1 cut(s)	1386
XapI	RAATTY	1 cut(s)	822
XbaI	TCTAGA	1 cut(s)	1375
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1603
XhoI	CTCGAG	1 cut(s)	1224
XmiI	GTMKAC	1 cut(s)	412
XmnI	GAANNNNTTC	1 cut(s)	1312
XspI	CTAG	4 cut(s)	963, 1149, 1376, 1557
ZrmI	AGTACT	3 cut(s)	78, 1030, 1448

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.