Reverse transcriptase (RNA-dependent DNA polymerase)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_2 | PF07727 | 3 - 98 | 1.4e-16 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 15 |
| AccB1I | GGYRCC | 1 cut(s) | 15 |
| AcsI | RAATTY | 1 cut(s) | 161 |
| AcuI | CTGAAG | 1 cut(s) | 579 |
| AfaI | GTAC | 2 cut(s) | 17, 485 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 385, 386 |
| AgsI | TTSAA | 4 cut(s) | 134, 190, 209, 402 |
| AjnI | CCWGG | 2 cut(s) | 267, 379 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 182, 214 |
| AoxI | GGCC | 1 cut(s) | 579 |
| ApoI | RAATTY | 1 cut(s) | 161 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 194 |
| Asp718I | GGTACC | 1 cut(s) | 15 |
| AsuHPI | GGTGA | 3 cut(s) | 125, 313, 404 |
| BanI | GGYRCC | 1 cut(s) | 15 |
| BauI | CACGAG | 1 cut(s) | 216 |
| BciT130I | CCWGG | 2 cut(s) | 269, 381 |
| BciVI | GTATCC | 1 cut(s) | 422 |
| BfaI | CTAG | 3 cut(s) | 260, 416, 552 |
| BfuI | GTATCC | 1 cut(s) | 422 |
| BglII | AGATCT | 1 cut(s) | 470 |
| Bme1390I | CCNGG | 2 cut(s) | 269, 381 |
| BmiI | GGNNCC | 1 cut(s) | 17 |
| BmrFI | CCNGG | 2 cut(s) | 269, 381 |
| BmsI | GCATC | 1 cut(s) | 427 |
| BsaAI | YACGTR | 1 cut(s) | 516 |
| BsaJI | CCNNGG | 2 cut(s) | 379, 380 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 385, 386 |
| Bse118I | RCCGGY | 1 cut(s) | 18 |
| BseBI | CCWGG | 2 cut(s) | 269, 381 |
| BseDI | CCNNGG | 2 cut(s) | 379, 380 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 385, 386 |
| BseMII | CTCAG | 1 cut(s) | 337 |
| BseRI | GAGGAG | 1 cut(s) | 140 |
| BshFI | GGCC | 1 cut(s) | 581 |
| BshNI | GGYRCC | 1 cut(s) | 15 |
| BsiSI | CCGG | 1 cut(s) | 19 |
| BslFI | GGGAC | 1 cut(s) | 195 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 385, 386 |
| BsmFI | GGGAC | 1 cut(s) | 195 |
| BsnI | GGCC | 1 cut(s) | 581 |
| Bsp143I | GATC | 1 cut(s) | 470 |
| BspANI | GGCC | 1 cut(s) | 581 |
| BspCNI | CTCAG | 1 cut(s) | 336 |
| BspLI | GGNNCC | 1 cut(s) | 17 |
| BspQI | GCTCTTC | 1 cut(s) | 515 |
| BspT107I | GGYRCC | 1 cut(s) | 15 |
| BsrFI | RCCGGY | 1 cut(s) | 18 |
| BssAI | RCCGGY | 1 cut(s) | 18 |
| BssECI | CCNNGG | 2 cut(s) | 379, 380 |
| BssMI | GATC | 1 cut(s) | 470 |
| BssSI | CACGAG | 1 cut(s) | 216 |
| Bst2BI | CACGAG | 1 cut(s) | 216 |
| Bst2UI | CCWGG | 2 cut(s) | 269, 381 |
| Bst4CI | ACNGT | 1 cut(s) | 410 |
| Bst6I | CTCTTC | 1 cut(s) | 515 |
| BstBAI | YACGTR | 1 cut(s) | 516 |
| BstDEI | CTNAG | 2 cut(s) | 121, 323 |
| BstKTI | GATC | 1 cut(s) | 473 |
| BstMBI | GATC | 1 cut(s) | 470 |
| BstNI | CCWGG | 2 cut(s) | 269, 381 |
| BstSCI | CCNGG | 2 cut(s) | 267, 379 |
| BstX2I | RGATCY | 1 cut(s) | 470 |
| BstYI | RGATCY | 1 cut(s) | 470 |
| BsuI | GTATCC | 1 cut(s) | 422 |
| BsuRI | GGCC | 1 cut(s) | 581 |
| BtsIMutI | CAGTG | 1 cut(s) | 331 |
| Cfr10I | RCCGGY | 1 cut(s) | 18 |
| Csp6I | GTAC | 2 cut(s) | 16, 484 |
| CviAII | CATG | 1 cut(s) | 100 |
| CviJI | RGCY | 3 cut(s) | 332, 545, 581 |
| CviKI_1 | RGCY | 3 cut(s) | 332, 545, 581 |
| CviQI | GTAC | 2 cut(s) | 16, 484 |
| DdeI | CTNAG | 2 cut(s) | 121, 323 |
| DpnI | GATC | 1 cut(s) | 472 |
| DpnII | GATC | 1 cut(s) | 470 |
| DraI | TTTAAA | 1 cut(s) | 369 |
| Eam1104I | CTCTTC | 1 cut(s) | 515 |
| EarI | CTCTTC | 1 cut(s) | 515 |
| Eco57I | CTGAAG | 1 cut(s) | 579 |
| EcoRII | CCWGG | 2 cut(s) | 267, 379 |
| EcoT22I | ATGCAT | 1 cut(s) | 318 |
| FaeI | CATG | 1 cut(s) | 103 |
| FaqI | GGGAC | 1 cut(s) | 195 |
| FatI | CATG | 1 cut(s) | 99 |
| FauNDI | CATATG | 1 cut(s) | 336 |
| FspBI | CTAG | 3 cut(s) | 260, 416, 552 |
| HaeIII | GGCC | 1 cut(s) | 581 |
| HapII | CCGG | 1 cut(s) | 19 |
| Hin1II | CATG | 1 cut(s) | 103 |
| HinfI | GANTC | 3 cut(s) | 130, 241, 304 |
| HpaII | CCGG | 1 cut(s) | 19 |
| HphI | GGTGA | 3 cut(s) | 125, 313, 404 |
| Hpy188I | TCNGA | 2 cut(s) | 34, 160 |
| Hpy188III | TCNNGA | 2 cut(s) | 260, 426 |
| HpyAV | CCTTC | 2 cut(s) | 217, 379 |
| HpyCH4III | ACNGT | 1 cut(s) | 410 |
| HpyCH4IV | ACGT | 1 cut(s) | 515 |
| HpyCH4V | TGCA | 2 cut(s) | 316, 440 |
| HpyF3I | CTNAG | 2 cut(s) | 121, 323 |
| HpySE526I | ACGT | 1 cut(s) | 515 |
| Hsp92II | CATG | 1 cut(s) | 103 |
| KpnI | GGTACC | 1 cut(s) | 19 |
| Kzo9I | GATC | 1 cut(s) | 470 |
| LguI | GCTCTTC | 1 cut(s) | 515 |
| LpnPI | CCDG | 8 cut(s) | 32, 254, 264, 281, 366, 393, 411, 435 |
| LweI | GCATC | 1 cut(s) | 427 |
| MaeI | CTAG | 3 cut(s) | 260, 416, 552 |
| MaeII | ACGT | 1 cut(s) | 515 |
| MaeIII | GTNAC | 5 cut(s) | 70, 138, 410, 503, 511 |
| MalI | GATC | 1 cut(s) | 472 |
| MboI | GATC | 1 cut(s) | 470 |
| MboII | GAAGA | 2 cut(s) | 147, 532 |
| MflI | RGATCY | 1 cut(s) | 470 |
| MluCI | AATT | 5 cut(s) | 9, 28, 161, 204, 393 |
| MlyI | GAGTC | 2 cut(s) | 250, 313 |
| MmeI | TCCRAC | 1 cut(s) | 57 |
| MnlI | CCTC | 4 cut(s) | 118, 322, 354, 566 |
| Mph1103I | ATGCAT | 1 cut(s) | 318 |
| MroXI | GAANNNNTTC | 1 cut(s) | 194 |
| MseI | TTAA | 3 cut(s) | 51, 368, 392 |
| MslI | CAYNNNNRTG | 3 cut(s) | 60, 104, 339 |
| MspI | CCGG | 1 cut(s) | 19 |
| MspR9I | CCNGG | 2 cut(s) | 269, 381 |
| MvaI | CCWGG | 2 cut(s) | 269, 381 |
| NdeI | CATATG | 1 cut(s) | 336 |
| NdeII | GATC | 1 cut(s) | 470 |
| NlaIII | CATG | 1 cut(s) | 103 |
| NlaIV | GGNNCC | 1 cut(s) | 17 |
| NmuCI | GTSAC | 2 cut(s) | 70, 410 |
| NsiI | ATGCAT | 1 cut(s) | 318 |
| PasI | CCCWGGG | 1 cut(s) | 380 |
| PciSI | GCTCTTC | 1 cut(s) | 515 |
| PdmI | GAANNNNTTC | 1 cut(s) | 194 |
| PfeI | GAWTC | 1 cut(s) | 130 |
| PleI | GAGTC | 2 cut(s) | 249, 312 |
| PpsI | GAGTC | 2 cut(s) | 249, 312 |
| Ppu21I | YACGTR | 1 cut(s) | 516 |
| Psp6I | CCWGG | 2 cut(s) | 267, 379 |
| PspGI | CCWGG | 2 cut(s) | 267, 379 |
| PspN4I | GGNNCC | 1 cut(s) | 17 |
| PsuI | RGATCY | 1 cut(s) | 470 |
| RsaI | GTAC | 2 cut(s) | 17, 485 |
| RsaNI | GTAC | 2 cut(s) | 16, 484 |
| RseI | CAYNNNNRTG | 3 cut(s) | 60, 104, 339 |
| SapI | GCTCTTC | 1 cut(s) | 515 |
| SaqAI | TTAA | 3 cut(s) | 51, 368, 392 |
| Sau3AI | GATC | 1 cut(s) | 470 |
| SchI | GAGTC | 2 cut(s) | 250, 313 |
| ScrFI | CCNGG | 2 cut(s) | 269, 381 |
| SfaNI | GCATC | 1 cut(s) | 427 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 60, 104, 339 |
| Sse9I | AATT | 5 cut(s) | 9, 28, 161, 204, 393 |
| SspI | AATATT | 2 cut(s) | 194, 457 |
| SspMI | CTAG | 3 cut(s) | 260, 416, 552 |
| StyD4I | CCNGG | 2 cut(s) | 267, 379 |
| TaaI | ACNGT | 1 cut(s) | 410 |
| TaiI | ACGT | 1 cut(s) | 518 |
| TasI | AATT | 5 cut(s) | 9, 28, 161, 204, 393 |
| TfiI | GAWTC | 1 cut(s) | 130 |
| Tru1I | TTAA | 3 cut(s) | 51, 368, 392 |
| Tru9I | TTAA | 3 cut(s) | 51, 368, 392 |
| TscAI | CASTG | 1 cut(s) | 331 |
| TseFI | GTSAC | 2 cut(s) | 70, 410 |
| Tsp45I | GTSAC | 2 cut(s) | 70, 410 |
| TspDTI | ATGAA | 1 cut(s) | 185 |
| TspRI | CASTG | 1 cut(s) | 331 |
| XapI | RAATTY | 1 cut(s) | 161 |
| XbaI | TCTAGA | 1 cut(s) | 259 |
| XmnI | GAANNNNTTC | 1 cut(s) | 194 |
| XspI | CTAG | 3 cut(s) | 260, 416, 552 |
| Zsp2I | ATGCAT | 1 cut(s) | 318 |