FvH4_7g12392

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000057
Physical Location & Seq
Reverse (-)
11277074 .. 11279372
2299 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g12392.t1

Sequence Viewer

Length: 2184 bp
ATGGAGTCTGGAGTTTCCTTCCTCCAGCGTTTCAAGATCCAACAAGCCAAATGTGATTACCTGCTACCTGAGCATGAAGCCGTTAAGTTGGCTATCAGAGGCCTGGAGCACCGCCAGCGGTTAAAGCATCACGGAGAGCACTTTACTTCCATGGGCGACCTGATTAACAAGGTCGGTAGCTACGAGCTAATCCTGAACGAGTTGGATGACAAAGTAAATGCCTCCAAAGGAACTTACATACCAGGGAAGAATCGGACAGTGGGGACATTAAGCCTGCAGGCCCCTACTTATGATTCCTATTATCAAAGGTCTGAGGAAACTCGCCCGGATCAGGAACATGAAGATATTGGCGCGGTAGAACTGACTGGCAAGCCATTAGCTCACAAATTGAAAAACCTGAAGATAACGCGCGAGCCAATCACCATCCAGTCCTTTGCATGGACCAAGCCAGAGTACGAGTCATACACCTATGATGCTAAGAACGCCCATCTGGTCTTTAATGACCTCATCGAGGCAAGATACGTGCGCTTGGATCACAAGATACCGCCCAAGGAAGAGCTGAAGGACAAAAAATACTGCGCCTTCCACAATGTTTACAATCATGACACCAAAGATTGTGTCAAGCTTCGAGACCAGCTGCAGACATGGCTGAACTCAGGCGAGCTAAAGATGAAAACACCAGACAGAGGACGAAGATCGACGCCGGGCACCAAAAAGGGCCGCGAGGAAGGTGACGATGGTGCCCGCCGGCCACGTCGCCAATACACCTACAACGAAGATCTTGCACATGAGGTTTTAGACGATCTCATTGATGACGGGCTCCTCACAGTGGCCAATTCCTTGCCATACATAGAATATAAGGAGGGGCGCATTCACTGCAAGTTTCATAATAGCTGGGGGCAAAGAACCTACGAATGCCAGCAACTCAGAGACCAGGTTCAAGACTGGCTCGACATCATGTATATTCGCTTTAAGAATAAGGGCGACTTCATGATGGCAACGGCTGACTTCGCTTGGCCTCGAGTAGGCCAACGAAGAATCACATTAGACTTGTCGCCAAATGCCGGTTTACATGAACCGCCGGGCCGAAATCGCAAACGGCCGGCGAATAACTATACTGTCCCGAATAACCAGCAGGGGAAAGCAGACGACCCAGCTCGACAGTTGGTCGCTAAGCTCGAAACGGACCGCCCCTCTCGCAAAGATAAGGGCAAAGCAGTCATGAGGGACGATGGACCGTTCCCCGTTGAAGATCCCCAGCCTATGAGTCCCAGGACTCGAGAAGAGCTGGAAAGGAGGATAGAACGTCTCGAGACGTTCGTCTATACACATTGGGCAGAGGCGGTACCTTCATCCCCTGCCACAAGTGAGATGGACATGTCAGACTCCAGCGGTGAACGTCACAACAACGAGGCCTCGAGCCCTCGGAAAGGCGTCCTAACCGACCCCTATATTCTCCCGACATCCAAATCAGCGATCAAGGATGGGGTCTGGTCTAAGAAGCGAAAGCTCCAAAAGCGATACGGTAGTATCCTACGTGCCTTACGGGCTGTCGAAGAGGGCGCTGTACGCCCCTCACAGCTCGCACAGACGCCTGAGCGGATGTGGAGGGAAGCAGAGGGTTTGCGCGCATTCCTTCAAATGCCGCCTGTCACACCCCCAAGGATTTGCGAGCAGTTCAGCGACGAGCCTGCACCCAAAGCAAATGTCTTTTGCCGACTCACGGTTCCACCAAAGCAGGATCCACAACCTTCCAGGCGCAGGCCATCACCAGAACCTGAAAGAAGAAGGGATCCACAACTTGCTAGGCCCAAACCGTCACCAGAGCCTGAAAAGAGAAGGGATCAACAAGCTCCCAGGCACAGGCCATCATCAGAGCCCGAGCGAAGGGCTCCGCCTACCGGTCCTAGGCGTAAGCTGTTCACGACCCCGGAACCAGAGTCCAAACGCGAGCCGTCTCAGCCCTCACGGCAACGGGAACGTCAAAATCCGGAGGCCAATATCATAAGGGAGCCACCACCACCACACCCGCCTCGGGCACGGTCTACCCCGGAGCCCGAGACTCGGATGGTTCCCCGAGTATCCGCCCTACAACGGTTGAAAAAAGAAGACAACGATAAGGCTCCTCTGGCGACAGACAAACAACCAGCCAAGGACCATCAACCTTCAACCAAGTCAGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

728

Amino Acids

83.83

Weight (kDa)

9.42

Isoelectric Point (pI)

63.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 69
Acc65I GGTACC 1 cut(s) 1345
AccB1I GGYRCC 3 cut(s) 707, 740, 1345
AccBSI CCGCTC 1 cut(s) 1600
AccI GTMKAC 1 cut(s) 2045
AccII CGCG 6 cut(s) 353, 409, 411, 723, 1629, 1950
AccIII TCCGGA 1 cut(s) 1990
AclWI GGATC 9 cut(s) 31, 336, 540, 1247, 1736, 1749, 1787, 1800, 1851
AcoI YGGCCR 3 cut(s) 749, 831, 1100
AcuI CTGAAG 2 cut(s) 419, 581
AcyI GRCGYC 3 cut(s) 701, 1434, 1592
AfaI GTAC 3 cut(s) 455, 1347, 1569
AflIII ACRYGT 1 cut(s) 1377
AgeI ACCGGT 1 cut(s) 1901
AgsI TTSAA 7 cut(s) 34, 391, 941, 1250, 1640, 2101, 2169
AhdI GACNNNNNGTC 1 cut(s) 1166
AjiI CACGTC 1 cut(s) 755
AjnI CCWGG 6 cut(s) 102, 241, 933, 1271, 1754, 1856
Alw21I GWGCWC 2 cut(s) 111, 141
Alw26I GTCTC 6 cut(s) 624, 924, 1307, 1313, 1962, 2054
AlwI GGATC 9 cut(s) 31, 336, 540, 1247, 1736, 1749, 1787, 1800, 1851
AlwNI CAGNNNCTG 2 cut(s) 1778, 1829
Ama87I CYCGRG 8 cut(s) 1020, 1278, 1310, 1417, 1880, 2034, 2057, 2076
Aor13HI TCCGGA 1 cut(s) 1990
ApeKI GCWGC 1 cut(s) 637
ArsI GACNNNNNNTTYG 4 cut(s) 603, 635, 1692, 1724
AsiGI ACCGGT 1 cut(s) 1901
Asp718I GGTACC 1 cut(s) 1345
AspA2I CCTAGG 1 cut(s) 1907
AspLEI GCGC 9 cut(s) 353, 411, 528, 581, 870, 1565, 1629, 1631, 1761
AspS9I GGNCC 9 cut(s) 280, 441, 718, 1084, 1186, 1235, 1809, 1904, 2155
AsuC2I CCSGG 5 cut(s) 326, 705, 1083, 1931, 2051
AsuHPI GGTGA 5 cut(s) 412, 743, 1406, 1761, 1812
AvaI CYCGRG 8 cut(s) 1020, 1278, 1310, 1417, 1880, 2034, 2057, 2076
AvaII GGWCC 5 cut(s) 441, 1186, 1235, 1904, 2155
AvrII CCTAGG 1 cut(s) 1907
BaeGI GKGCMC 3 cut(s) 710, 745, 2041
BaeI ACNNNNGTAYC 4 cut(s) 1513, 1513, 1546, 1546
BalI TGGCCA 1 cut(s) 833
BamHI GGATCC 2 cut(s) 1741, 1792
BanI GGYRCC 3 cut(s) 707, 740, 1345
BanII GRGCYC 5 cut(s) 822, 1424, 1881, 1894, 2058
BbsI GAAGAC 1 cut(s) 2115
Bbv12I GWGCWC 2 cut(s) 111, 141
BbvI GCAGC 1 cut(s) 624
BceAI ACGGC 5 cut(s) 65, 1017, 1115, 1939, 1985
BcgI CGANNNNNNTGC 4 cut(s) 764, 798, 1673, 1707
BciT130I CCWGG 6 cut(s) 104, 243, 935, 1273, 1756, 1858
BciVI GTATCC 2 cut(s) 1541, 2092
BcnI CCSGG 5 cut(s) 326, 705, 1083, 1931, 2051
BcoDI GTCTC 6 cut(s) 624, 924, 1307, 1313, 1962, 2054
BfaI CTAG 2 cut(s) 1806, 1908
BfmI CTRYAG 2 cut(s) 275, 638
BfoI RGCGCY 1 cut(s) 1566
BfuAI ACCTGC 1 cut(s) 69
BfuI GTATCC 2 cut(s) 1541, 2092
BglI GCCNNNNNGGC 2 cut(s) 1547, 1969
BglII AGATCT 1 cut(s) 778
BisI GCNGC 3 cut(s) 638, 721, 1646
BlnI CCTAGG 1 cut(s) 1907
BlpI GCTNAGC 1 cut(s) 1173
BlsI GCNGC 3 cut(s) 639, 722, 1647
Bme18I GGWCC 5 cut(s) 441, 1186, 1235, 1904, 2155
BmeRI GACNNNNNGTC 1 cut(s) 1166
BmeT110I CYCGRG 8 cut(s) 1020, 1278, 1310, 1417, 1880, 2034, 2057, 2076
BmgBI CACGTC 1 cut(s) 755
BmgT120I GGNCC 9 cut(s) 280, 441, 718, 1084, 1186, 1235, 1809, 1904, 2155
BmsI GCATC 2 cut(s) 136, 463
BoxI GACNNNNGTC 1 cut(s) 1319
BpiI GAAGAC 1 cut(s) 2115
BpmI CTGGAG 4 cut(s) 8, 30, 125, 1372
Bpu10I CCTNAGC 2 cut(s) 69, 1596
Bpu1102I GCTNAGC 1 cut(s) 1173
BpuMI CCSGG 5 cut(s) 326, 705, 1083, 1931, 2051
BsaAI YACGTR 2 cut(s) 523, 1538
BsaHI GRCGYC 3 cut(s) 701, 1434, 1592
BsaI GGTCTC 2 cut(s) 624, 924
BsaWI WCCGGW 2 cut(s) 1901, 1990
Bse118I RCCGGY 4 cut(s) 747, 1064, 1102, 1901
Bse1I ACTGG 3 cut(s) 370, 427, 950
BseAI TCCGGA 1 cut(s) 1990
BseBI CCWGG 6 cut(s) 104, 243, 935, 1273, 1756, 1858
BseGI GGATG 7 cut(s) 211, 423, 1352, 1463, 1489, 1608, 2073
BseMII CTCAG 6 cut(s) 60, 303, 669, 940, 1587, 1973
BseNI ACTGG 3 cut(s) 370, 427, 950
BsePI GCGCGC 1 cut(s) 1627
BseRI GAGGAG 2 cut(s) 812, 2115
BseSI GKGCMC 3 cut(s) 710, 745, 2041
BseX3I CGGCCG 1 cut(s) 1100
BseXI GCAGC 1 cut(s) 624
BseYI CCCAGC 3 cut(s) 894, 1153, 1257
BsgI GTGCAG 1 cut(s) 1677
Bsh1236I CGCG 6 cut(s) 353, 409, 411, 723, 1629, 1950
Bsh1285I CGRYCG 1 cut(s) 1103
BshNI GGYRCC 3 cut(s) 707, 740, 1345
BshTI ACCGGT 1 cut(s) 1901
BsiEI CGRYCG 1 cut(s) 1103
BsiHKAI GWGCWC 2 cut(s) 111, 141
BsiHKCI CYCGRG 8 cut(s) 1020, 1278, 1310, 1417, 1880, 2034, 2057, 2076
BslFI GGGAC 4 cut(s) 277, 1106, 1241, 1254
BsmAI GTCTC 6 cut(s) 624, 924, 1307, 1313, 1962, 2054
BsmBI CGTCTC 3 cut(s) 1307, 1313, 1962
BsmFI GGGAC 4 cut(s) 277, 1106, 1241, 1254
BsmI GAATGC 3 cut(s) 870, 920, 1631
Bso31I GGTCTC 2 cut(s) 624, 924
BsoBI CYCGRG 8 cut(s) 1020, 1278, 1310, 1417, 1880, 2034, 2057, 2076
Bsp13I TCCGGA 1 cut(s) 1990
Bsp1720I GCTNAGC 1 cut(s) 1173
Bsp19I CCATGG 1 cut(s) 150
BspCNI CTCAG 6 cut(s) 61, 304, 668, 939, 1588, 1972
BspEI TCCGGA 1 cut(s) 1990
BspFNI CGCG 6 cut(s) 353, 409, 411, 723, 1629, 1950
BspHI TCATGA 3 cut(s) 601, 990, 1221
BspMAI CTGCAG 2 cut(s) 279, 642
BspMI ACCTGC 1 cut(s) 69
BspPI GGATC 9 cut(s) 31, 336, 540, 1247, 1736, 1749, 1787, 1800, 1851
BspQI GCTCTTC 2 cut(s) 549, 1278
BspT107I GGYRCC 3 cut(s) 707, 740, 1345
BspTNI GGTCTC 2 cut(s) 624, 924
BsrBI CCGCTC 1 cut(s) 1600
BsrFI RCCGGY 4 cut(s) 747, 1064, 1102, 1901
BsrI ACTGG 3 cut(s) 370, 427, 950
BssAI RCCGGY 4 cut(s) 747, 1064, 1102, 1901
BssHII GCGCGC 1 cut(s) 1627
BssNI GRCGYC 3 cut(s) 701, 1434, 1592
BssT1I CCWWGG 5 cut(s) 150, 549, 1661, 1907, 2151
Bst2UI CCWGG 6 cut(s) 104, 243, 935, 1273, 1756, 1858
Bst6I CTCTTC 3 cut(s) 549, 1278, 1551
BstACI GRCGYC 3 cut(s) 701, 1434, 1592
BstAPI GCANNNNNTGC 1 cut(s) 876
BstBAI YACGTR 2 cut(s) 523, 1538
BstDEI CTNAG 9 cut(s) 69, 312, 477, 655, 926, 1173, 1497, 1596, 1959
BstDSI CCRYGG 1 cut(s) 150
BstENI CCTNNNNNAGG 3 cut(s) 509, 1023, 1428
BstF5I GGATG 7 cut(s) 211, 423, 1352, 1463, 1489, 1608, 2073
BstFNI CGCG 6 cut(s) 353, 409, 411, 723, 1629, 1950
BstH2I RGCGCY 1 cut(s) 1566
BstHHI GCGC 9 cut(s) 353, 411, 528, 581, 870, 1565, 1629, 1631, 1761
BstMAI GTCTC 6 cut(s) 624, 924, 1307, 1313, 1962, 2054
BstMCI CGRYCG 1 cut(s) 1103
BstNI CCWGG 6 cut(s) 104, 243, 935, 1273, 1756, 1858
BstNSI RCATGY 1 cut(s) 1381
BstPAI GACNNNNGTC 1 cut(s) 1319
BstSFI CTRYAG 2 cut(s) 275, 638
BstSLI GKGCMC 3 cut(s) 710, 745, 2041
BstUI CGCG 6 cut(s) 353, 409, 411, 723, 1629, 1950
BstV1I GCAGC 1 cut(s) 624
BstV2I GAAGAC 1 cut(s) 2115
BstX2I RGATCY 5 cut(s) 36, 778, 1252, 1741, 1792
BstYI RGATCY 5 cut(s) 36, 778, 1252, 1741, 1792
BstZI CGGCCG 1 cut(s) 1100
BsuI GTATCC 2 cut(s) 1541, 2092
BtgI CCRYGG 1 cut(s) 150
BtrI CACGTC 1 cut(s) 755
BtsCI GGATG 7 cut(s) 211, 423, 1352, 1463, 1489, 1608, 2073
BtsI GCAGTG 1 cut(s) 874
BtsIMutI CAGTG 4 cut(s) 264, 834, 874, 2184
BveI ACCTGC 1 cut(s) 69
CaiI CAGNNNCTG 2 cut(s) 1778, 1829
CciI TCATGA 3 cut(s) 601, 990, 1221
CfoI GCGC 9 cut(s) 353, 411, 528, 581, 870, 1565, 1629, 1631, 1761
Cfr10I RCCGGY 4 cut(s) 747, 1064, 1102, 1901
Cfr13I GGNCC 9 cut(s) 280, 441, 718, 1084, 1186, 1235, 1809, 1904, 2155
CpoI CGGWCCG 1 cut(s) 1186
CseI GACGC 3 cut(s) 709, 1423, 1600
CsiI ACCWGGT 1 cut(s) 933
Csp6I GTAC 3 cut(s) 454, 1346, 1568
CspAI ACCGGT 1 cut(s) 1901
CspI CGGWCCG 1 cut(s) 1186
CviQI GTAC 3 cut(s) 454, 1346, 1568
DdeI CTNAG 9 cut(s) 69, 312, 477, 655, 926, 1173, 1497, 1596, 1959
DriI GACNNNNNGTC 1 cut(s) 1166
EaeI YGGCCR 3 cut(s) 749, 831, 1100
EagI CGGCCG 1 cut(s) 1100
Eam1104I CTCTTC 3 cut(s) 549, 1278, 1551
Eam1105I GACNNNNNGTC 1 cut(s) 1166
EarI CTCTTC 3 cut(s) 549, 1278, 1551
EciI GGCGGA 2 cut(s) 1884, 2074
EclXI CGGCCG 1 cut(s) 1100
Eco130I CCWWGG 5 cut(s) 150, 549, 1661, 1907, 2151
Eco147I AGGCCT 2 cut(s) 102, 1415
Eco24I GRGCYC 5 cut(s) 822, 1424, 1881, 1894, 2058
Eco31I GGTCTC 2 cut(s) 624, 924
Eco47I GGWCC 5 cut(s) 441, 1186, 1235, 1904, 2155
Eco52I CGGCCG 1 cut(s) 1100
Eco57I CTGAAG 2 cut(s) 419, 581
Eco88I CYCGRG 8 cut(s) 1020, 1278, 1310, 1417, 1880, 2034, 2057, 2076
EcoNI CCTNNNNNAGG 3 cut(s) 509, 1023, 1428
EcoO109I RGGNCCY 1 cut(s) 280
EcoRII CCWGG 6 cut(s) 102, 241, 933, 1271, 1754, 1856
EcoT14I CCWWGG 5 cut(s) 150, 549, 1661, 1907, 2151
EcoT38I GRGCYC 5 cut(s) 822, 1424, 1881, 1894, 2058
ErhI CCWWGG 5 cut(s) 150, 549, 1661, 1907, 2151
Esp3I CGTCTC 3 cut(s) 1307, 1313, 1962
FalI AAGNNNNNCTT 2 cut(s) 971, 1003
FaqI GGGAC 4 cut(s) 277, 1106, 1241, 1254
FauI CCCGC 2 cut(s) 752, 2037
FblI GTMKAC 1 cut(s) 2045
Fnu4HI GCNGC 3 cut(s) 638, 721, 1646
FokI GGATG 7 cut(s) 218, 410, 1339, 1450, 1496, 1615, 2080
FriOI GRGCYC 5 cut(s) 822, 1424, 1881, 1894, 2058
Fsp4HI GCNGC 3 cut(s) 638, 721, 1646
FspBI CTAG 2 cut(s) 1806, 1908
GlaI GCGC 9 cut(s) 352, 410, 527, 580, 869, 1564, 1628, 1630, 1760
GluI GCNGC 3 cut(s) 638, 721, 1646
GsaI CCCAGC 3 cut(s) 898, 1157, 1261
GsuI CTGGAG 4 cut(s) 8, 30, 125, 1372
HaeII RGCGCY 1 cut(s) 1566
HgaI GACGC 3 cut(s) 709, 1423, 1600
HhaI GCGC 9 cut(s) 353, 411, 528, 581, 870, 1565, 1629, 1631, 1761
Hin1I GRCGYC 3 cut(s) 701, 1434, 1592
Hin6I GCGC 9 cut(s) 351, 409, 526, 579, 868, 1563, 1627, 1629, 1759
HinP1I GCGC 9 cut(s) 351, 409, 526, 579, 868, 1563, 1627, 1629, 1759
HindIII AAGCTT 1 cut(s) 623
HphI GGTGA 5 cut(s) 412, 743, 1406, 1761, 1812
Hpy166II GTNNAC 5 cut(s) 595, 1070, 1397, 1923, 2046
Hpy188I TCNGA 8 cut(s) 98, 255, 313, 929, 1384, 1428, 1876, 2067
Hpy8I GTNNAC 5 cut(s) 595, 1070, 1397, 1923, 2046
Hpy99I CGWCG 3 cut(s) 703, 759, 1688
HpyCH4IV ACGT 7 cut(s) 522, 754, 1306, 1316, 1399, 1537, 1981
HpyCH4V TGCA 6 cut(s) 277, 437, 640, 785, 879, 1694
HpyF3I CTNAG 9 cut(s) 69, 312, 477, 655, 926, 1173, 1497, 1596, 1959
HpySE526I ACGT 7 cut(s) 522, 754, 1306, 1316, 1399, 1537, 1981
Hsp92I GRCGYC 3 cut(s) 701, 1434, 1592
HspAI GCGC 9 cut(s) 351, 409, 526, 579, 868, 1563, 1627, 1629, 1759
Kpn2I TCCGGA 1 cut(s) 1990
KpnI GGTACC 1 cut(s) 1349
KroI GCCGGC 2 cut(s) 747, 1102
KroNI GCCGGC 2 cut(s) 749, 1104
LguI GCTCTTC 2 cut(s) 549, 1278
LmnI GCTCC 8 cut(s) 106, 825, 1515, 1858, 1897, 2011, 2053, 2128
Lsp1109I GCAGC 1 cut(s) 624
LweI GCATC 2 cut(s) 136, 463
MabI ACCWGGT 1 cut(s) 933
MaeI CTAG 2 cut(s) 1806, 1908
MaeII ACGT 7 cut(s) 522, 754, 1306, 1316, 1399, 1537, 1981
MaeIII GTNAC 4 cut(s) 731, 1400, 1651, 1818
MbiI CCGCTC 1 cut(s) 1600
MflI RGATCY 5 cut(s) 36, 778, 1252, 1741, 1792
MlsI TGGCCA 1 cut(s) 833
MluCI AATT 2 cut(s) 386, 835
MluNI TGGCCA 1 cut(s) 833
MlyI GAGTC 8 cut(s) 14, 467, 1270, 1276, 1379, 1713, 1949, 2056
MmeI TCCRAC 2 cut(s) 64, 183
Mox20I TGGCCA 1 cut(s) 833
MroI TCCGGA 1 cut(s) 1990
MroNI GCCGGC 2 cut(s) 747, 1102
MscI TGGCCA 1 cut(s) 833
MseI TTAA 6 cut(s) 84, 122, 165, 269, 498, 972
Msp20I TGGCCA 1 cut(s) 833
MspA1I CMGCKG 3 cut(s) 118, 637, 1392
Mva1269I GAATGC 3 cut(s) 870, 920, 1631
MvaI CCWGG 6 cut(s) 104, 243, 935, 1273, 1756, 1858
MvnI CGCG 6 cut(s) 353, 409, 411, 723, 1629, 1950
NaeI GCCGGC 2 cut(s) 749, 1104
NciI CCSGG 5 cut(s) 326, 705, 1083, 1931, 2051
NcoI CCATGG 1 cut(s) 150
NgoMIV GCCGGC 2 cut(s) 747, 1102
NmuCI GTSAC 4 cut(s) 731, 1400, 1651, 1818
NspI RCATGY 1 cut(s) 1381
PaeR7I CTCGAG 4 cut(s) 1020, 1278, 1310, 1417
PagI TCATGA 3 cut(s) 601, 990, 1221
PauI GCGCGC 1 cut(s) 1627
PceI AGGCCT 2 cut(s) 102, 1415
PciI ACATGT 1 cut(s) 1377
PciSI GCTCTTC 2 cut(s) 549, 1278
PcsI WCGNNNNNNNCGW 3 cut(s) 180, 1176, 1317
PctI GAATGC 3 cut(s) 870, 920, 1631
PdiI GCCGGC 2 cut(s) 749, 1104
PfeI GAWTC 3 cut(s) 250, 293, 1038
PinAI ACCGGT 1 cut(s) 1901
PkrI GCNGC 3 cut(s) 639, 722, 1647
PleI GAGTC 8 cut(s) 13, 466, 1270, 1275, 1379, 1713, 1948, 2056
PpsI GAGTC 8 cut(s) 13, 466, 1270, 1275, 1379, 1713, 1948, 2056
Ppu21I YACGTR 2 cut(s) 523, 1538
PscI ACATGT 1 cut(s) 1377
PshAI GACNNNNGTC 1 cut(s) 1319
Psp6I CCWGG 6 cut(s) 102, 241, 933, 1271, 1754, 1856
PspFI CCCAGC 3 cut(s) 894, 1153, 1257
PspGI CCWGG 6 cut(s) 102, 241, 933, 1271, 1754, 1856
PspPI GGNCC 9 cut(s) 280, 441, 718, 1084, 1186, 1235, 1809, 1904, 2155
PspXI VCTCGAGB 2 cut(s) 1020, 1417
PstI CTGCAG 2 cut(s) 279, 642
PstNI CAGNNNCTG 2 cut(s) 1778, 1829
PsuI RGATCY 5 cut(s) 36, 778, 1252, 1741, 1792
PteI GCGCGC 1 cut(s) 1627
PvuII CAGCTG 1 cut(s) 637
RsaI GTAC 3 cut(s) 455, 1347, 1569
RsaNI GTAC 3 cut(s) 454, 1346, 1568
Rsr2I CGGWCCG 1 cut(s) 1186
RsrII CGGWCCG 1 cut(s) 1186
SapI GCTCTTC 2 cut(s) 549, 1278
SaqAI TTAA 6 cut(s) 84, 122, 165, 269, 498, 972
SatI GCNGC 3 cut(s) 638, 721, 1646
Sau96I GGNCC 9 cut(s) 280, 441, 718, 1084, 1186, 1235, 1809, 1904, 2155
SbfI CCTGCAGG 1 cut(s) 279
SchI GAGTC 8 cut(s) 14, 467, 1270, 1276, 1379, 1713, 1949, 2056
SdaI CCTGCAGG 1 cut(s) 279
SexAI ACCWGGT 1 cut(s) 933
SfaNI GCATC 2 cut(s) 136, 463
SfcI CTRYAG 2 cut(s) 275, 638
Sfr274I CTCGAG 4 cut(s) 1020, 1278, 1310, 1417
SinI GGWCC 5 cut(s) 441, 1186, 1235, 1904, 2155
SlaI CTCGAG 4 cut(s) 1020, 1278, 1310, 1417
SmlI CTYRAG 4 cut(s) 1020, 1278, 1310, 1417
SmoI CTYRAG 4 cut(s) 1020, 1278, 1310, 1417
Sse8387I CCTGCAGG 1 cut(s) 279
Sse9I AATT 2 cut(s) 386, 835
SseBI AGGCCT 2 cut(s) 102, 1415
SspMI CTAG 2 cut(s) 1806, 1908
StuI AGGCCT 2 cut(s) 102, 1415
StyI CCWWGG 5 cut(s) 150, 549, 1661, 1907, 2151
TaiI ACGT 7 cut(s) 525, 757, 1309, 1319, 1402, 1540, 1984
TasI AATT 2 cut(s) 386, 835
TauI GCSGC 2 cut(s) 723, 1648
TfiI GAWTC 3 cut(s) 250, 293, 1038
Tru1I TTAA 6 cut(s) 84, 122, 165, 269, 498, 972
Tru9I TTAA 6 cut(s) 84, 122, 165, 269, 498, 972
TscAI CASTG 4 cut(s) 264, 834, 881, 2184
TseFI GTSAC 4 cut(s) 731, 1400, 1651, 1818
TseI GCWGC 1 cut(s) 637
Tsp45I GTSAC 4 cut(s) 731, 1400, 1651, 1818
TspDTI ATGAA 7 cut(s) 90, 354, 686, 875, 979, 1089, 1341
TspGWI ACGGA 2 cut(s) 147, 1199
TspRI CASTG 4 cut(s) 264, 834, 881, 2184
VpaK11BI GGWCC 5 cut(s) 441, 1186, 1235, 1904, 2155
XagI CCTNNNNNAGG 3 cut(s) 509, 1023, 1428
XceI RCATGY 1 cut(s) 1381
XcmI CCANNNNNNNNNTGG 1 cut(s) 1369
XhoI CTCGAG 4 cut(s) 1020, 1278, 1310, 1417
XmaJI CCTAGG 1 cut(s) 1907
XmiI GTMKAC 1 cut(s) 2045
XspI CTAG 2 cut(s) 1806, 1908
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.