Retrotransposon gag protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 213 |
| Acc36I | ACCTGC | 1 cut(s) | 213 |
| AccIII | TCCGGA | 3 cut(s) | 48, 54, 256 |
| AciI | CCGC | 3 cut(s) | 24, 80, 127 |
| AclI | AACGTT | 2 cut(s) | 43, 248 |
| AclWI | GGATC | 2 cut(s) | 46, 59 |
| AfaI | GTAC | 1 cut(s) | 35 |
| AgsI | TTSAA | 1 cut(s) | 160 |
| AleI | CACNNNNGTG | 1 cut(s) | 185 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 238, 270 |
| AluBI | AGCT | 1 cut(s) | 195 |
| AluI | AGCT | 1 cut(s) | 195 |
| Alw21I | GWGCWC | 1 cut(s) | 204 |
| AlwI | GGATC | 2 cut(s) | 46, 59 |
| Ama87I | CYCGRG | 1 cut(s) | 83 |
| Aor13HI | TCCGGA | 3 cut(s) | 48, 54, 256 |
| AspLEI | GCGC | 1 cut(s) | 135 |
| AspS9I | GGNCC | 2 cut(s) | 76, 172 |
| AvaI | CYCGRG | 1 cut(s) | 83 |
| AvaII | GGWCC | 2 cut(s) | 76, 172 |
| BamHI | GGATCC | 1 cut(s) | 51 |
| Bbv12I | GWGCWC | 1 cut(s) | 204 |
| BccI | CCATC | 1 cut(s) | 211 |
| BfuAI | ACCTGC | 1 cut(s) | 213 |
| Bme18I | GGWCC | 2 cut(s) | 76, 172 |
| BmeT110I | CYCGRG | 1 cut(s) | 83 |
| BmgT120I | GGNCC | 2 cut(s) | 76, 172 |
| BmiI | GGNNCC | 4 cut(s) | 53, 78, 123, 173 |
| BsaJI | CCNNGG | 1 cut(s) | 165 |
| BsaWI | WCCGGW | 3 cut(s) | 48, 54, 256 |
| Bse118I | RCCGGY | 1 cut(s) | 129 |
| BseAI | TCCGGA | 3 cut(s) | 48, 54, 256 |
| BseDI | CCNNGG | 1 cut(s) | 165 |
| BseGI | GGATG | 1 cut(s) | 226 |
| Bsh1285I | CGRYCG | 1 cut(s) | 18 |
| BsiEI | CGRYCG | 1 cut(s) | 18 |
| BsiHKAI | GWGCWC | 1 cut(s) | 204 |
| BsiHKCI | CYCGRG | 1 cut(s) | 83 |
| BsiSI | CCGG | 4 cut(s) | 49, 55, 130, 257 |
| BslFI | GGGAC | 2 cut(s) | 62, 185 |
| BsmFI | GGGAC | 2 cut(s) | 62, 185 |
| BsmI | GAATGC | 1 cut(s) | 238 |
| BsoBI | CYCGRG | 1 cut(s) | 83 |
| Bsp1286I | GDGCHC | 1 cut(s) | 204 |
| Bsp13I | TCCGGA | 3 cut(s) | 48, 54, 256 |
| Bsp143I | GATC | 2 cut(s) | 51, 108 |
| Bsp19I | CCATGG | 1 cut(s) | 165 |
| BspACI | CCGC | 3 cut(s) | 24, 80, 127 |
| BspEI | TCCGGA | 3 cut(s) | 48, 54, 256 |
| BspLI | GGNNCC | 4 cut(s) | 53, 78, 123, 173 |
| BspMI | ACCTGC | 1 cut(s) | 213 |
| BspPI | GGATC | 2 cut(s) | 46, 59 |
| BsrFI | RCCGGY | 1 cut(s) | 129 |
| BssAI | RCCGGY | 1 cut(s) | 129 |
| BssECI | CCNNGG | 1 cut(s) | 165 |
| BssMI | GATC | 2 cut(s) | 51, 108 |
| BssT1I | CCWWGG | 1 cut(s) | 165 |
| BstC8I | GCNNGC | 1 cut(s) | 131 |
| BstDEI | CTNAG | 1 cut(s) | 240 |
| BstDSI | CCRYGG | 1 cut(s) | 165 |
| BstF5I | GGATG | 1 cut(s) | 226 |
| BstHHI | GCGC | 1 cut(s) | 135 |
| BstKTI | GATC | 2 cut(s) | 54, 111 |
| BstMBI | GATC | 2 cut(s) | 51, 108 |
| BstMCI | CGRYCG | 1 cut(s) | 18 |
| BstX2I | RGATCY | 1 cut(s) | 51 |
| BstYI | RGATCY | 1 cut(s) | 51 |
| BtgI | CCRYGG | 1 cut(s) | 165 |
| BtsCI | GGATG | 1 cut(s) | 226 |
| BveI | ACCTGC | 1 cut(s) | 213 |
| Cac8I | GCNNGC | 1 cut(s) | 131 |
| CfoI | GCGC | 1 cut(s) | 135 |
| Cfr10I | RCCGGY | 1 cut(s) | 129 |
| Cfr13I | GGNCC | 2 cut(s) | 76, 172 |
| Csp6I | GTAC | 1 cut(s) | 34 |
| CviAII | CATG | 3 cut(s) | 31, 146, 166 |
| CviJI | RGCY | 2 cut(s) | 5, 195 |
| CviKI_1 | RGCY | 2 cut(s) | 5, 195 |
| CviQI | GTAC | 1 cut(s) | 34 |
| DdeI | CTNAG | 1 cut(s) | 240 |
| DpnI | GATC | 2 cut(s) | 53, 110 |
| DpnII | GATC | 2 cut(s) | 51, 108 |
| Eco130I | CCWWGG | 1 cut(s) | 165 |
| Eco47I | GGWCC | 2 cut(s) | 76, 172 |
| Eco88I | CYCGRG | 1 cut(s) | 83 |
| EcoO109I | RGGNCCY | 1 cut(s) | 172 |
| EcoT14I | CCWWGG | 1 cut(s) | 165 |
| ErhI | CCWWGG | 1 cut(s) | 165 |
| FaeI | CATG | 3 cut(s) | 34, 149, 169 |
| FaiI | YATR | 5 cut(s) | 32, 147, 155, 167, 227 |
| FaqI | GGGAC | 2 cut(s) | 62, 185 |
| FatI | CATG | 3 cut(s) | 30, 145, 165 |
| FauI | CCCGC | 2 cut(s) | 87, 134 |
| FokI | GGATG | 1 cut(s) | 233 |
| GlaI | GCGC | 1 cut(s) | 134 |
| HapII | CCGG | 4 cut(s) | 49, 55, 130, 257 |
| HhaI | GCGC | 1 cut(s) | 135 |
| Hin1II | CATG | 3 cut(s) | 34, 149, 169 |
| Hin6I | GCGC | 1 cut(s) | 133 |
| HinP1I | GCGC | 1 cut(s) | 133 |
| HinfI | GANTC | 1 cut(s) | 20 |
| HpaII | CCGG | 4 cut(s) | 49, 55, 130, 257 |
| Hpy188I | TCNGA | 1 cut(s) | 212 |
| Hpy188III | TCNNGA | 4 cut(s) | 49, 55, 181, 257 |
| HpyAV | CCTTC | 2 cut(s) | 58, 82 |
| HpyCH4IV | ACGT | 2 cut(s) | 43, 248 |
| HpyF3I | CTNAG | 1 cut(s) | 240 |
| HpySE526I | ACGT | 2 cut(s) | 43, 248 |
| Hsp92II | CATG | 3 cut(s) | 34, 149, 169 |
| HspAI | GCGC | 1 cut(s) | 133 |
| Kpn2I | TCCGGA | 3 cut(s) | 48, 54, 256 |
| KroI | GCCGGC | 1 cut(s) | 129 |
| KroNI | GCCGGC | 1 cut(s) | 131 |
| Kzo9I | GATC | 2 cut(s) | 51, 108 |
| LpnPI | CCDG | 5 cut(s) | 62, 68, 143, 218, 270 |
| MaeII | ACGT | 2 cut(s) | 43, 248 |
| MalI | GATC | 2 cut(s) | 53, 110 |
| MboI | GATC | 2 cut(s) | 51, 108 |
| MflI | RGATCY | 1 cut(s) | 51 |
| MhlI | GDGCHC | 1 cut(s) | 204 |
| MluCI | AATT | 1 cut(s) | 92 |
| MlyI | GAGTC | 1 cut(s) | 29 |
| MnlI | CCTC | 1 cut(s) | 247 |
| MreI | CGCCGGCG | 1 cut(s) | 129 |
| MroI | TCCGGA | 3 cut(s) | 48, 54, 256 |
| MroNI | GCCGGC | 1 cut(s) | 129 |
| MslI | CAYNNNNRTG | 1 cut(s) | 185 |
| MspI | CCGG | 4 cut(s) | 49, 55, 130, 257 |
| Mva1269I | GAATGC | 1 cut(s) | 238 |
| NaeI | GCCGGC | 1 cut(s) | 131 |
| NcoI | CCATGG | 1 cut(s) | 165 |
| NdeII | GATC | 2 cut(s) | 51, 108 |
| NgoMIV | GCCGGC | 1 cut(s) | 129 |
| NlaIII | CATG | 3 cut(s) | 34, 149, 169 |
| NlaIV | GGNNCC | 4 cut(s) | 53, 78, 123, 173 |
| OliI | CACNNNNGTG | 1 cut(s) | 185 |
| PaqCI | CACCTGC | 1 cut(s) | 213 |
| PctI | GAATGC | 1 cut(s) | 238 |
| PdiI | GCCGGC | 1 cut(s) | 131 |
| PflFI | GACNNNGTC | 1 cut(s) | 19 |
| PleI | GAGTC | 1 cut(s) | 28 |
| PpsI | GAGTC | 1 cut(s) | 28 |
| PpuMI | RGGWCCY | 1 cut(s) | 172 |
| Psp1406I | AACGTT | 2 cut(s) | 43, 248 |
| Psp5II | RGGWCCY | 1 cut(s) | 172 |
| PspN4I | GGNNCC | 4 cut(s) | 53, 78, 123, 173 |
| PspPI | GGNCC | 2 cut(s) | 76, 172 |
| PspPPI | RGGWCCY | 1 cut(s) | 172 |
| PsuI | RGATCY | 1 cut(s) | 51 |
| PsyI | GACNNNGTC | 1 cut(s) | 19 |
| RsaI | GTAC | 1 cut(s) | 35 |
| RsaNI | GTAC | 1 cut(s) | 34 |
| RseI | CAYNNNNRTG | 1 cut(s) | 185 |
| Sau3AI | GATC | 2 cut(s) | 51, 108 |
| Sau96I | GGNCC | 2 cut(s) | 76, 172 |
| SchI | GAGTC | 1 cut(s) | 29 |
| SduI | GDGCHC | 1 cut(s) | 204 |
| SetI | ASST | 6 cut(s) | 39, 46, 177, 197, 207, 251 |
| SgrAI | CRCCGGYG | 1 cut(s) | 129 |
| SinI | GGWCC | 2 cut(s) | 76, 172 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 185 |
| Sse9I | AATT | 1 cut(s) | 92 |
| SsiI | CCGC | 3 cut(s) | 24, 80, 127 |
| StyI | CCWWGG | 1 cut(s) | 165 |
| TaiI | ACGT | 2 cut(s) | 46, 251 |
| TaqII | GACCGA | 1 cut(s) | 32 |
| TasI | AATT | 1 cut(s) | 92 |
| TspDTI | ATGAA | 1 cut(s) | 241 |
| Tth111I | GACNNNGTC | 1 cut(s) | 19 |
| VpaK11BI | GGWCC | 2 cut(s) | 76, 172 |