transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 638 |
| AccII | CGCG | 3 cut(s) | 392, 694, 738 |
| AccIII | TCCGGA | 2 cut(s) | 482, 661 |
| AciI | CCGC | 6 cut(s) | 87, 392, 514, 694, 715, 736 |
| AclWI | GGATC | 1 cut(s) | 55 |
| AcoI | YGGCCR | 2 cut(s) | 72, 155 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 70, 191, 286, 335, 523, 609 |
| AgsI | TTSAA | 4 cut(s) | 106, 132, 415, 682 |
| AjiI | CACGTC | 1 cut(s) | 233 |
| AluBI | AGCT | 2 cut(s) | 15, 488 |
| AluI | AGCT | 2 cut(s) | 15, 488 |
| Alw21I | GWGCWC | 3 cut(s) | 17, 202, 585 |
| Alw26I | GTCTC | 1 cut(s) | 557 |
| Alw44I | GTGCAC | 1 cut(s) | 198 |
| AlwI | GGATC | 1 cut(s) | 55 |
| Ama87I | CYCGRG | 4 cut(s) | 18, 121, 269, 517 |
| Aor13HI | TCCGGA | 2 cut(s) | 482, 661 |
| AoxI | GGCC | 5 cut(s) | 72, 155, 181, 213, 273 |
| ApaI | GGGCCC | 1 cut(s) | 277 |
| ApaLI | GTGCAC | 1 cut(s) | 198 |
| ApeKI | GCWGC | 1 cut(s) | 488 |
| AspLEI | GCGC | 2 cut(s) | 639, 740 |
| AspS9I | GGNCC | 4 cut(s) | 182, 214, 273, 274 |
| AsuHPI | GGTGA | 1 cut(s) | 620 |
| AsuII | TTCGAA | 1 cut(s) | 668 |
| AvaI | CYCGRG | 4 cut(s) | 18, 121, 269, 517 |
| BaeGI | GKGCMC | 2 cut(s) | 202, 277 |
| BalI | TGGCCA | 1 cut(s) | 74 |
| BanII | GRGCYC | 2 cut(s) | 17, 277 |
| Bbv12I | GWGCWC | 3 cut(s) | 17, 202, 585 |
| BbvI | GCAGC | 1 cut(s) | 475 |
| BccI | CCATC | 2 cut(s) | 193, 278 |
| BceAI | ACGGC | 3 cut(s) | 61, 160, 196 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 459, 493 |
| BcoDI | GTCTC | 1 cut(s) | 557 |
| BfaI | CTAG | 1 cut(s) | 408 |
| BfmI | CTRYAG | 1 cut(s) | 576 |
| BisI | GCNGC | 4 cut(s) | 393, 489, 716, 736 |
| BlsI | GCNGC | 4 cut(s) | 394, 490, 717, 737 |
| BmeT110I | CYCGRG | 4 cut(s) | 18, 121, 269, 517 |
| BmgBI | CACGTC | 1 cut(s) | 233 |
| BmgT120I | GGNCC | 4 cut(s) | 182, 214, 273, 274 |
| BmiI | GGNNCC | 4 cut(s) | 274, 275, 660, 734 |
| BmsI | GCATC | 1 cut(s) | 154 |
| Bpu14I | TTCGAA | 1 cut(s) | 668 |
| BpuEI | CTTGAG | 1 cut(s) | 436 |
| BsaWI | WCCGGW | 2 cut(s) | 482, 661 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 70, 191, 286, 335, 523, 609 |
| Bse118I | RCCGGY | 1 cut(s) | 153 |
| Bse3DI | GCAATG | 2 cut(s) | 428, 549 |
| BseAI | TCCGGA | 2 cut(s) | 482, 661 |
| BseGI | GGATG | 3 cut(s) | 85, 400, 618 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 70, 191, 286, 335, 523, 609 |
| BseMI | GCAATG | 2 cut(s) | 428, 549 |
| BseRI | GAGGAG | 3 cut(s) | 195, 198, 260 |
| BseSI | GKGCMC | 2 cut(s) | 202, 277 |
| BseXI | GCAGC | 1 cut(s) | 475 |
| Bsh1236I | CGCG | 3 cut(s) | 392, 694, 738 |
| Bsh1285I | CGRYCG | 1 cut(s) | 430 |
| BshFI | GGCC | 5 cut(s) | 74, 157, 183, 215, 275 |
| BsiEI | CGRYCG | 1 cut(s) | 430 |
| BsiHKAI | GWGCWC | 3 cut(s) | 17, 202, 585 |
| BsiHKCI | CYCGRG | 4 cut(s) | 18, 121, 269, 517 |
| BslFI | GGGAC | 1 cut(s) | 601 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 70, 191, 286, 335, 523, 609 |
| BsmAI | GTCTC | 1 cut(s) | 557 |
| BsmFI | GGGAC | 1 cut(s) | 601 |
| BsmI | GAATGC | 1 cut(s) | 639 |
| BsnI | GGCC | 5 cut(s) | 74, 157, 183, 215, 275 |
| BsoBI | CYCGRG | 4 cut(s) | 18, 121, 269, 517 |
| Bsp119I | TTCGAA | 1 cut(s) | 668 |
| Bsp120I | GGGCCC | 1 cut(s) | 273 |
| Bsp1286I | GDGCHC | 4 cut(s) | 17, 202, 277, 585 |
| Bsp13I | TCCGGA | 2 cut(s) | 482, 661 |
| Bsp143I | GATC | 2 cut(s) | 39, 60 |
| BspACI | CCGC | 6 cut(s) | 87, 392, 514, 694, 715, 736 |
| BspANI | GGCC | 5 cut(s) | 74, 157, 183, 215, 275 |
| BspEI | TCCGGA | 2 cut(s) | 482, 661 |
| BspFNI | CGCG | 3 cut(s) | 392, 694, 738 |
| BspLI | GGNNCC | 4 cut(s) | 274, 275, 660, 734 |
| BspPI | GGATC | 1 cut(s) | 55 |
| BspQI | GCTCTTC | 1 cut(s) | 291 |
| BspT104I | TTCGAA | 1 cut(s) | 668 |
| BsrDI | GCAATG | 2 cut(s) | 428, 549 |
| BsrFI | RCCGGY | 1 cut(s) | 153 |
| BssAI | RCCGGY | 1 cut(s) | 153 |
| BssMI | GATC | 2 cut(s) | 39, 60 |
| BssT1I | CCWWGG | 1 cut(s) | 75 |
| Bst4CI | ACNGT | 1 cut(s) | 194 |
| Bst6I | CTCTTC | 2 cut(s) | 231, 291 |
| BstBI | TTCGAA | 1 cut(s) | 668 |
| BstC8I | GCNNGC | 2 cut(s) | 324, 540 |
| BstF5I | GGATG | 3 cut(s) | 85, 400, 618 |
| BstFNI | CGCG | 3 cut(s) | 392, 694, 738 |
| BstHHI | GCGC | 2 cut(s) | 639, 740 |
| BstKTI | GATC | 2 cut(s) | 42, 63 |
| BstMAI | GTCTC | 1 cut(s) | 557 |
| BstMBI | GATC | 2 cut(s) | 39, 60 |
| BstMCI | CGRYCG | 1 cut(s) | 430 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 173 |
| BstSFI | CTRYAG | 1 cut(s) | 576 |
| BstSLI | GKGCMC | 2 cut(s) | 202, 277 |
| BstUI | CGCG | 3 cut(s) | 392, 694, 738 |
| BstV1I | GCAGC | 1 cut(s) | 475 |
| BstX2I | RGATCY | 1 cut(s) | 60 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 284 |
| BstYI | RGATCY | 1 cut(s) | 60 |
| BsuRI | GGCC | 5 cut(s) | 74, 157, 183, 215, 275 |
| BtgZI | GCGATG | 1 cut(s) | 177 |
| BtrI | CACGTC | 1 cut(s) | 233 |
| BtsCI | GGATG | 3 cut(s) | 85, 400, 618 |
| Cac8I | GCNNGC | 2 cut(s) | 324, 540 |
| CfoI | GCGC | 2 cut(s) | 639, 740 |
| Cfr10I | RCCGGY | 1 cut(s) | 153 |
| Cfr13I | GGNCC | 4 cut(s) | 182, 214, 273, 274 |
| Cfr9I | CCCGGG | 4 cut(s) | 18, 121, 269, 517 |
| CviAII | CATG | 6 cut(s) | 159, 319, 498, 685, 757, 765 |
| DpnI | GATC | 2 cut(s) | 41, 62 |
| DpnII | GATC | 2 cut(s) | 39, 60 |
| EaeI | YGGCCR | 2 cut(s) | 72, 155 |
| Eam1104I | CTCTTC | 2 cut(s) | 231, 291 |
| EarI | CTCTTC | 2 cut(s) | 231, 291 |
| EciI | GGCGGA | 1 cut(s) | 503 |
| Ecl136II | GAGCTC | 1 cut(s) | 15 |
| Eco130I | CCWWGG | 1 cut(s) | 75 |
| Eco24I | GRGCYC | 2 cut(s) | 17, 277 |
| Eco53kI | GAGCTC | 1 cut(s) | 15 |
| Eco88I | CYCGRG | 4 cut(s) | 18, 121, 269, 517 |
| EcoICRI | GAGCTC | 1 cut(s) | 15 |
| EcoO109I | RGGNCCY | 1 cut(s) | 273 |
| EcoT14I | CCWWGG | 1 cut(s) | 75 |
| EcoT38I | GRGCYC | 2 cut(s) | 17, 277 |
| ErhI | CCWWGG | 1 cut(s) | 75 |
| FaeI | CATG | 6 cut(s) | 162, 322, 501, 688, 760, 768 |
| FaqI | GGGAC | 1 cut(s) | 601 |
| FatI | CATG | 6 cut(s) | 158, 318, 497, 684, 756, 764 |
| Fnu4HI | GCNGC | 4 cut(s) | 393, 489, 716, 736 |
| FokI | GGATG | 3 cut(s) | 92, 387, 625 |
| FriOI | GRGCYC | 2 cut(s) | 17, 277 |
| Fsp4HI | GCNGC | 4 cut(s) | 393, 489, 716, 736 |
| FspBI | CTAG | 1 cut(s) | 408 |
| FspI | TGCGCA | 1 cut(s) | 638 |
| GlaI | GCGC | 2 cut(s) | 638, 739 |
| GluI | GCNGC | 4 cut(s) | 393, 489, 716, 736 |
| HaeIII | GGCC | 5 cut(s) | 74, 157, 183, 215, 275 |
| HhaI | GCGC | 2 cut(s) | 639, 740 |
| Hin1II | CATG | 6 cut(s) | 162, 322, 501, 688, 760, 768 |
| Hin6I | GCGC | 2 cut(s) | 637, 738 |
| HinP1I | GCGC | 2 cut(s) | 637, 738 |
| HinfI | GANTC | 1 cut(s) | 665 |
| HphI | GGTGA | 1 cut(s) | 620 |
| Hpy166II | GTNNAC | 2 cut(s) | 6, 200 |
| Hpy188III | TCNNGA | 3 cut(s) | 58, 483, 662 |
| Hpy8I | GTNNAC | 2 cut(s) | 6, 200 |
| Hpy99I | CGWCG | 2 cut(s) | 47, 234 |
| HpyAV | CCTTC | 1 cut(s) | 664 |
| HpyCH4III | ACNGT | 1 cut(s) | 194 |
| HpyCH4IV | ACGT | 1 cut(s) | 232 |
| HpyCH4V | TGCA | 4 cut(s) | 176, 200, 421, 458 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 173 |
| HpySE526I | ACGT | 1 cut(s) | 232 |
| Hsp92II | CATG | 6 cut(s) | 162, 322, 501, 688, 760, 768 |
| HspAI | GCGC | 2 cut(s) | 637, 738 |
| Kpn2I | TCCGGA | 2 cut(s) | 482, 661 |
| Kzo9I | GATC | 2 cut(s) | 39, 60 |
| LguI | GCTCTTC | 1 cut(s) | 291 |
| LmnI | GCTCC | 3 cut(s) | 20, 485, 732 |
| Lsp1109I | GCAGC | 1 cut(s) | 475 |
| LweI | GCATC | 1 cut(s) | 154 |
| MaeI | CTAG | 1 cut(s) | 408 |
| MaeII | ACGT | 1 cut(s) | 232 |
| MaeIII | GTNAC | 1 cut(s) | 688 |
| MalI | GATC | 2 cut(s) | 41, 62 |
| MboI | GATC | 2 cut(s) | 39, 60 |
| MboII | GAAGA | 3 cut(s) | 248, 308, 389 |
| MflI | RGATCY | 1 cut(s) | 60 |
| MhlI | GDGCHC | 4 cut(s) | 17, 202, 277, 585 |
| MlsI | TGGCCA | 1 cut(s) | 74 |
| MluCI | AATT | 5 cut(s) | 24, 95, 532, 677, 703 |
| MluNI | TGGCCA | 1 cut(s) | 74 |
| Mox20I | TGGCCA | 1 cut(s) | 74 |
| MroI | TCCGGA | 2 cut(s) | 482, 661 |
| MscI | TGGCCA | 1 cut(s) | 74 |
| MseI | TTAA | 1 cut(s) | 710 |
| MslI | CAYNNNNRTG | 2 cut(s) | 132, 282 |
| Msp20I | TGGCCA | 1 cut(s) | 74 |
| Mva1269I | GAATGC | 1 cut(s) | 639 |
| MvnI | CGCG | 3 cut(s) | 392, 694, 738 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 173 |
| NdeII | GATC | 2 cut(s) | 39, 60 |
| NlaIII | CATG | 6 cut(s) | 162, 322, 501, 688, 760, 768 |
| NlaIV | GGNNCC | 4 cut(s) | 274, 275, 660, 734 |
| NsbI | TGCGCA | 1 cut(s) | 638 |
| NspV | TTCGAA | 1 cut(s) | 668 |
| PciSI | GCTCTTC | 1 cut(s) | 291 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 628, 750 |
| PctI | GAATGC | 1 cut(s) | 639 |
| PfeI | GAWTC | 1 cut(s) | 665 |
| PkrI | GCNGC | 4 cut(s) | 394, 490, 717, 737 |
| Psp124BI | GAGCTC | 1 cut(s) | 17 |
| PspN4I | GGNNCC | 4 cut(s) | 274, 275, 660, 734 |
| PspOMI | GGGCCC | 1 cut(s) | 273 |
| PspPI | GGNCC | 4 cut(s) | 182, 214, 273, 274 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 134, 166 |
| PsuI | RGATCY | 1 cut(s) | 60 |
| RseI | CAYNNNNRTG | 2 cut(s) | 132, 282 |
| SacI | GAGCTC | 1 cut(s) | 17 |
| SapI | GCTCTTC | 1 cut(s) | 291 |
| SaqAI | TTAA | 1 cut(s) | 710 |
| SatI | GCNGC | 4 cut(s) | 393, 489, 716, 736 |
| Sau3AI | GATC | 2 cut(s) | 39, 60 |
| Sau96I | GGNCC | 4 cut(s) | 182, 214, 273, 274 |
| SduI | GDGCHC | 4 cut(s) | 17, 202, 277, 585 |
| SfaNI | GCATC | 1 cut(s) | 154 |
| SfcI | CTRYAG | 1 cut(s) | 576 |
| SfuI | TTCGAA | 1 cut(s) | 668 |
| SmaI | CCCGGG | 4 cut(s) | 20, 123, 271, 519 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 132, 282 |
| SmlI | CTYRAG | 1 cut(s) | 451 |
| SmoI | CTYRAG | 1 cut(s) | 451 |
| Sse9I | AATT | 5 cut(s) | 24, 95, 532, 677, 703 |
| SsiI | CCGC | 6 cut(s) | 87, 392, 514, 694, 715, 736 |
| SspI | AATATT | 1 cut(s) | 117 |
| SspMI | CTAG | 1 cut(s) | 408 |
| SstI | GAGCTC | 1 cut(s) | 17 |
| StyI | CCWWGG | 1 cut(s) | 75 |
| TaaI | ACNGT | 1 cut(s) | 194 |
| TaiI | ACGT | 1 cut(s) | 235 |
| TaqI | TCGA | 3 cut(s) | 42, 282, 668 |
| TaqII | GACCGA | 1 cut(s) | 444 |
| TasI | AATT | 5 cut(s) | 24, 95, 532, 677, 703 |
| TauI | GCSGC | 3 cut(s) | 395, 718, 738 |
| TfiI | GAWTC | 1 cut(s) | 665 |
| Tru1I | TTAA | 1 cut(s) | 710 |
| Tru9I | TTAA | 1 cut(s) | 710 |
| TseI | GCWGC | 1 cut(s) | 488 |
| TspDTI | ATGAA | 1 cut(s) | 309 |
| TspMI | CCCGGG | 4 cut(s) | 18, 121, 269, 517 |
| VneI | GTGCAC | 1 cut(s) | 198 |
| XmaI | CCCGGG | 4 cut(s) | 18, 121, 269, 517 |
| XspI | CTAG | 1 cut(s) | 408 |