Rmu_sc0004862.1_g000011

Sister chromatid cohesion protein PDS5 homolog

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004862.1
Physical Location & Seq
Reverse (-)
28465 .. 29651
1187 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004862.1_g000011.1.cds

Sequence Viewer

Length: 1125 bp
atggccttcaccaaaccggagttcgcgacgtatacttatgatgccaataaagctcacgagatcctcgacgagatgatcgctgcgaagatggtgaagactgattttgggccttttccgcggccagagcagttgaagggaaagaaatacggcaagttccataatctgtggaaccacaacaccgcggactgtgtaaagctcaaagaccagattcaggtatggcttaataacggtagtttgcaggtagaagctccagtcacagcggtggcactagttgacgtggaccccttccctgacaccggggtcaatatggtcaatgtggattggaacaaacagcagcgacggaaaccaactctggatttggtttcgagcaagcagagtgataggtccatcgaggatgaagcgccagccaaggataaaattgggtcaaccaaccaggcctcacccgtgattctgtgctcgcgatgtaaagaggaatgcagtatccaaaaacgcacgaggaagtcgaacagacatttcactttggttccctaccaccaatcaagtgggcctcgtcgtcacggaactatcagccttccagtccaagagaacgggagaagacgtccgaaacaagagcagaccaagagcgacggcaaagatattctgaccaagccctatataccacctgcttcaactaaccctatcaaggagggcagatggtacaccagggaaaagaggaaggcagtggagattagctcgtccaggaaaaggaagttacagcgcaggtttggcgaggccaagcgcgctttagaggctttagatcagggtttgatcaagccttcccagctagtcaagtcgcccgagcaataccagaaagagatggaagcgttggctgctaaaccattgagaccgccccgtgtttttaacaaacatacagattcactaacaggggcttcaaagcccagtgtgttttgcaggattactaaggagcgctcaccacctcgtgctcggacagggaactcgccaactcggcgcccgcatgtcaggcgcaggcttttccatgagacactagtggtcaaagcttcagtctttgataggttggggggcaaggacagggttagtgacaccttgcagtggcgacccaagtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

374

Amino Acids

42.72

Weight (kDa)

10.13

Isoelectric Point (pI)

62.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 670
AasI GACNNNNNNGTC 1 cut(s) 299
AatII GACGTC 1 cut(s) 601
Acc36I ACCTGC 3 cut(s) 229, 670, 750
AccB1I GGYRCC 1 cut(s) 1008
AccI GTMKAC 1 cut(s) 32
AccII CGCG 5 cut(s) 26, 118, 182, 460, 780
AciI CCGC 7 cut(s) 116, 118, 180, 182, 260, 887, 1013
AclWI GGATC 1 cut(s) 55
AcoI YGGCCR 1 cut(s) 119
AcuI CTGAAG 1 cut(s) 1044
AcyI GRCGYC 2 cut(s) 598, 1009
AdeI CACNNNGTG 1 cut(s) 980
AfaI GTAC 1 cut(s) 698
AfeI AGCGCT 1 cut(s) 968
AfiI CCNNNNNNNGG 5 cut(s) 211, 296, 682, 744, 1110
AgsI TTSAA 3 cut(s) 133, 669, 933
AhlI ACTAGT 2 cut(s) 268, 1045
AjiI CACGTC 1 cut(s) 277
AjnI CCWGG 3 cut(s) 432, 701, 737
AjuI GAANNNNNNNTTGG 1 cut(s) 37
AleI CACNNNNGTG 1 cut(s) 260
AluBI AGCT 6 cut(s) 53, 196, 248, 732, 823, 1058
AluI AGCT 6 cut(s) 53, 196, 248, 732, 823, 1058
Alw21I GWGCWC 2 cut(s) 458, 985
Alw26I GTCTC 2 cut(s) 877, 1034
AlwI GGATC 1 cut(s) 55
Ama87I CYCGRG 1 cut(s) 836
Aor51HI AGCGCT 1 cut(s) 968
AoxI GGCC 6 cut(s) 3, 107, 119, 435, 545, 771
ApeKI GCWGC 3 cut(s) 80, 334, 869
ArsI GACNNNNNNTTYG 2 cut(s) 1047, 1079
AspLEI GCGC 7 cut(s) 403, 759, 780, 782, 969, 1011, 1026
AspS9I GGNCC 4 cut(s) 107, 280, 384, 545
AsuC2I CCSGG 1 cut(s) 298
AsuHPI GGTGA 3 cut(s) 103, 432, 963
AvaI CYCGRG 1 cut(s) 836
AvaII GGWCC 2 cut(s) 280, 384
BanI GGYRCC 1 cut(s) 1008
BauI CACGAG 3 cut(s) 56, 493, 978
BbsI GAAGAC 2 cut(s) 101, 601
Bbv12I GWGCWC 2 cut(s) 458, 985
BbvI GCAGC 3 cut(s) 67, 346, 856
BccI CCATC 4 cut(s) 82, 395, 687, 850
BceAI ACGGC 2 cut(s) 163, 643
BciT130I CCWGG 3 cut(s) 434, 703, 739
BciVI GTATCC 1 cut(s) 491
BclI TGATCA 1 cut(s) 807
BcnI CCSGG 1 cut(s) 298
BcoDI GTCTC 2 cut(s) 877, 1034
BcuI ACTAGT 2 cut(s) 268, 1045
BfaI CTAG 3 cut(s) 269, 824, 1046
BfoI RGCGCY 3 cut(s) 404, 970, 1012
BfuAI ACCTGC 3 cut(s) 229, 670, 750
BfuI GTATCC 1 cut(s) 491
BglI GCCNNNNNGGC 1 cut(s) 1006
BisI GCNGC 4 cut(s) 81, 119, 335, 870
BlsI GCNGC 4 cut(s) 82, 120, 336, 871
Bme1390I CCNGG 4 cut(s) 298, 434, 703, 739
Bme18I GGWCC 2 cut(s) 280, 384
BmeT110I CYCGRG 1 cut(s) 836
BmgBI CACGTC 1 cut(s) 277
BmgT120I GGNCC 4 cut(s) 107, 280, 384, 545
BmiI GGNNCC 4 cut(s) 170, 282, 525, 1010
BmrFI CCNGG 4 cut(s) 298, 434, 703, 739
BmrI ACTGGG 1 cut(s) 933
BmsI GCATC 1 cut(s) 31
BmuI ACTGGG 1 cut(s) 933
BpiI GAAGAC 2 cut(s) 101, 601
BplI GAGNNNNNCTC 2 cut(s) 716, 748
BpmI CTGGAG 1 cut(s) 234
BpuMI CCSGG 1 cut(s) 298
BsaHI GRCGYC 2 cut(s) 598, 1009
BsaI GGTCTC 1 cut(s) 877
BsaJI CCNNGG 5 cut(s) 116, 180, 297, 408, 702
BsaWI WCCGGW 1 cut(s) 16
BsaXI ACNNNNNCTCC 2 cut(s) 583, 613
Bsc4I CCNNNNNNNGG 5 cut(s) 211, 296, 682, 744, 1110
Bse1I ACTGG 3 cut(s) 251, 575, 939
BseBI CCWGG 3 cut(s) 434, 703, 739
BseDI CCNNGG 5 cut(s) 116, 180, 297, 408, 702
BseGI GGATG 1 cut(s) 400
BseLI CCNNNNNNNGG 5 cut(s) 211, 296, 682, 744, 1110
BseNI ACTGG 3 cut(s) 251, 575, 939
BsePI GCGCGC 1 cut(s) 778
BseXI GCAGC 3 cut(s) 67, 346, 856
BseYI CCCAGC 1 cut(s) 819
Bsh1236I CGCG 5 cut(s) 26, 118, 182, 460, 780
BshFI GGCC 6 cut(s) 5, 109, 121, 437, 547, 773
BshNI GGYRCC 1 cut(s) 1008
BsiHKAI GWGCWC 2 cut(s) 458, 985
BsiHKCI CYCGRG 1 cut(s) 836
BsiSI CCGG 2 cut(s) 17, 297
BslI CCNNNNNNNGG 5 cut(s) 211, 296, 682, 744, 1110
BsmAI GTCTC 2 cut(s) 877, 1034
BsmI GAATGC 1 cut(s) 479
BsnI GGCC 6 cut(s) 5, 109, 121, 437, 547, 773
Bso31I GGTCTC 1 cut(s) 877
BsoBI CYCGRG 1 cut(s) 836
Bsp1286I GDGCHC 2 cut(s) 458, 985
Bsp143I GATC 4 cut(s) 60, 75, 796, 807
Bsp68I TCGCGA 2 cut(s) 26, 460
BspACI CCGC 7 cut(s) 116, 118, 180, 182, 260, 887, 1013
BspANI GGCC 6 cut(s) 5, 109, 121, 437, 547, 773
BspFNI CGCG 5 cut(s) 26, 118, 182, 460, 780
BspLI GGNNCC 4 cut(s) 170, 282, 525, 1010
BspMI ACCTGC 3 cut(s) 229, 670, 750
BspPI GGATC 1 cut(s) 55
BspT107I GGYRCC 1 cut(s) 1008
BspTNI GGTCTC 1 cut(s) 877
BsrI ACTGG 3 cut(s) 251, 575, 939
BssECI CCNNGG 5 cut(s) 116, 180, 297, 408, 702
BssHII GCGCGC 1 cut(s) 778
BssMI GATC 4 cut(s) 60, 75, 796, 807
BssNAI GTATAC 1 cut(s) 33
BssNI GRCGYC 2 cut(s) 598, 1009
BssSI CACGAG 3 cut(s) 56, 493, 978
BssT1I CCWWGG 1 cut(s) 408
Bst1107I GTATAC 1 cut(s) 33
Bst2BI CACGAG 3 cut(s) 56, 493, 978
Bst2UI CCWGG 3 cut(s) 434, 703, 739
Bst4CI ACNGT 2 cut(s) 188, 230
BstACI GRCGYC 2 cut(s) 598, 1009
BstC8I GCNNGC 6 cut(s) 371, 405, 458, 780, 1013, 1028
BstDEI CTNAG 1 cut(s) 960
BstDSI CCRYGG 2 cut(s) 116, 180
BstF5I GGATG 1 cut(s) 400
BstFNI CGCG 5 cut(s) 26, 118, 182, 460, 780
BstH2I RGCGCY 3 cut(s) 404, 970, 1012
BstHHI GCGC 7 cut(s) 403, 759, 780, 782, 969, 1011, 1026
BstKTI GATC 4 cut(s) 63, 78, 799, 810
BstMAI GTCTC 2 cut(s) 877, 1034
BstMBI GATC 4 cut(s) 60, 75, 796, 807
BstNI CCWGG 3 cut(s) 434, 703, 739
BstNSI RCATGY 1 cut(s) 1019
BstSCI CCNGG 4 cut(s) 296, 432, 701, 737
BstUI CGCG 5 cut(s) 26, 118, 182, 460, 780
BstV1I GCAGC 3 cut(s) 67, 346, 856
BstV2I GAAGAC 2 cut(s) 101, 601
BstX2I RGATCY 1 cut(s) 60
BstXI CCANNNNNNTGG 1 cut(s) 542
BstYI RGATCY 1 cut(s) 60
BstZ17I GTATAC 1 cut(s) 33
BsuI GTATCC 1 cut(s) 491
BsuRI GGCC 6 cut(s) 5, 109, 121, 437, 547, 773
BtgI CCRYGG 2 cut(s) 116, 180
BtgZI GCGATG 1 cut(s) 475
BtrI CACGTC 1 cut(s) 277
BtsCI GGATG 1 cut(s) 400
BtsI GCAGTG 2 cut(s) 726, 1115
BtsIMutI CAGTG 3 cut(s) 726, 946, 1115
BtuMI TCGCGA 2 cut(s) 26, 460
BveI ACCTGC 3 cut(s) 229, 670, 750
Cac8I GCNNGC 6 cut(s) 371, 405, 458, 780, 1013, 1028
CfoI GCGC 7 cut(s) 403, 759, 780, 782, 969, 1011, 1026
Cfr13I GGNCC 4 cut(s) 107, 280, 384, 545
Cfr42I CCGCGG 2 cut(s) 119, 183
Csp6I GTAC 1 cut(s) 697
CviAII CATG 2 cut(s) 1016, 1037
CviQI GTAC 1 cut(s) 697
DdeI CTNAG 1 cut(s) 960
DinI GGCGCC 1 cut(s) 1010
DpnI GATC 4 cut(s) 62, 77, 798, 809
DpnII GATC 4 cut(s) 60, 75, 796, 807
DraIII CACNNNGTG 1 cut(s) 980
DrdI GACNNNNNNGTC 1 cut(s) 299
DseDI GACNNNNNNGTC 1 cut(s) 299
EaeI YGGCCR 1 cut(s) 119
Eco130I CCWWGG 1 cut(s) 408
Eco147I AGGCCT 1 cut(s) 437
Eco31I GGTCTC 1 cut(s) 877
Eco47I GGWCC 2 cut(s) 280, 384
Eco47III AGCGCT 1 cut(s) 968
Eco57I CTGAAG 1 cut(s) 1044
Eco88I CYCGRG 1 cut(s) 836
EcoRII CCWGG 3 cut(s) 432, 701, 737
EcoT14I CCWWGG 1 cut(s) 408
EgeI GGCGCC 1 cut(s) 1010
EheI GGCGCC 1 cut(s) 1010
ErhI CCWWGG 1 cut(s) 408
FaeI CATG 2 cut(s) 1019, 1040
FatI CATG 2 cut(s) 1015, 1036
FauI CCCGC 1 cut(s) 1020
FbaI TGATCA 1 cut(s) 807
FblI GTMKAC 1 cut(s) 32
Fnu4HI GCNGC 4 cut(s) 81, 119, 335, 870
FokI GGATG 1 cut(s) 407
Fsp4HI GCNGC 4 cut(s) 81, 119, 335, 870
FspBI CTAG 3 cut(s) 269, 824, 1046
GlaI GCGC 7 cut(s) 402, 758, 779, 781, 968, 1010, 1025
GluI GCNGC 4 cut(s) 81, 119, 335, 870
GsaI CCCAGC 1 cut(s) 823
GsuI CTGGAG 1 cut(s) 234
HaeII RGCGCY 3 cut(s) 404, 970, 1012
HaeIII GGCC 6 cut(s) 5, 109, 121, 437, 547, 773
HapII CCGG 2 cut(s) 17, 297
HhaI GCGC 7 cut(s) 403, 759, 780, 782, 969, 1011, 1026
Hin1I GRCGYC 2 cut(s) 598, 1009
Hin1II CATG 2 cut(s) 1019, 1040
Hin6I GCGC 7 cut(s) 401, 757, 778, 780, 967, 1009, 1024
HinP1I GCGC 7 cut(s) 401, 757, 778, 780, 967, 1009, 1024
HincII GTYRAC 2 cut(s) 274, 426
HindII GTYRAC 2 cut(s) 274, 426
HindIII AAGCTT 1 cut(s) 1056
HinfI GANTC 3 cut(s) 208, 448, 914
HpaII CCGG 2 cut(s) 17, 297
HphI GGTGA 3 cut(s) 103, 432, 963
Hpy166II GTNNAC 5 cut(s) 33, 274, 280, 426, 699
Hpy188I TCNGA 3 cut(s) 603, 642, 987
Hpy188III TCNNGA 4 cut(s) 25, 56, 353, 459
Hpy8I GTNNAC 5 cut(s) 33, 274, 280, 426, 699
Hpy99I CGWCG 5 cut(s) 31, 71, 342, 555, 629
HpyAV CCTTC 6 cut(s) 16, 127, 295, 581, 709, 825
HpyCH4III ACNGT 2 cut(s) 188, 230
HpyCH4IV ACGT 3 cut(s) 29, 276, 598
HpyCH4V TGCA 4 cut(s) 238, 477, 951, 1108
HpyF3I CTNAG 1 cut(s) 960
HpySE526I ACGT 3 cut(s) 29, 276, 598
Hsp92I GRCGYC 2 cut(s) 598, 1009
Hsp92II CATG 2 cut(s) 1019, 1040
HspAI GCGC 7 cut(s) 401, 757, 778, 780, 967, 1009, 1024
KasI GGCGCC 1 cut(s) 1008
Ksp22I TGATCA 1 cut(s) 807
KspI CCGCGG 2 cut(s) 119, 183
Kzo9I GATC 4 cut(s) 60, 75, 796, 807
LmnI GCTCC 2 cut(s) 253, 964
Lsp1109I GCAGC 3 cut(s) 67, 346, 856
LweI GCATC 1 cut(s) 31
MaeI CTAG 3 cut(s) 269, 824, 1046
MaeII ACGT 3 cut(s) 29, 276, 598
MaeIII GTNAC 4 cut(s) 253, 554, 750, 1097
MalI GATC 4 cut(s) 62, 77, 798, 809
MboI GATC 4 cut(s) 60, 75, 796, 807
MboII GAAGA 3 cut(s) 97, 106, 606
MflI RGATCY 1 cut(s) 60
MhlI GDGCHC 2 cut(s) 458, 985
MluCI AATT 1 cut(s) 417
Mly113I GGCGCC 1 cut(s) 1009
MseI TTAA 2 cut(s) 222, 900
MslI CAYNNNNRTG 1 cut(s) 260
MspA1I CMGCKG 3 cut(s) 118, 182, 260
MspI CCGG 2 cut(s) 17, 297
MspR9I CCNGG 4 cut(s) 298, 434, 703, 739
Mva1269I GAATGC 1 cut(s) 479
MvaI CCWGG 3 cut(s) 434, 703, 739
MvnI CGCG 5 cut(s) 26, 118, 182, 460, 780
NarI GGCGCC 1 cut(s) 1009
NciI CCSGG 1 cut(s) 298
NdeII GATC 4 cut(s) 60, 75, 796, 807
NlaIII CATG 2 cut(s) 1019, 1040
NlaIV GGNNCC 4 cut(s) 170, 282, 525, 1010
NmeAIII GCCGAG 1 cut(s) 985
NmuCI GTSAC 3 cut(s) 253, 554, 1097
NruI TCGCGA 2 cut(s) 26, 460
NspI RCATGY 1 cut(s) 1019
OliI CACNNNNGTG 1 cut(s) 260
PaqCI CACCTGC 1 cut(s) 670
PauI GCGCGC 1 cut(s) 778
PceI AGGCCT 1 cut(s) 437
PcsI WCGNNNNNNNCGW 2 cut(s) 63, 500
PctI GAATGC 1 cut(s) 479
PfeI GAWTC 3 cut(s) 208, 448, 914
PfoI TCCNGGA 1 cut(s) 737
PkrI GCNGC 4 cut(s) 82, 120, 336, 871
PluTI GGCGCC 1 cut(s) 1012
Psp6I CCWGG 3 cut(s) 432, 701, 737
PspFI CCCAGC 1 cut(s) 819
PspGI CCWGG 3 cut(s) 432, 701, 737
PspN4I GGNNCC 4 cut(s) 170, 282, 525, 1010
PspPI GGNCC 4 cut(s) 107, 280, 384, 545
PsuI RGATCY 1 cut(s) 60
PteI GCGCGC 1 cut(s) 778
RruI TCGCGA 2 cut(s) 26, 460
RsaI GTAC 1 cut(s) 698
RsaNI GTAC 1 cut(s) 697
RseI CAYNNNNRTG 1 cut(s) 260
SacII CCGCGG 2 cut(s) 119, 183
SaqAI TTAA 2 cut(s) 222, 900
SatI GCNGC 4 cut(s) 81, 119, 335, 870
Sau3AI GATC 4 cut(s) 60, 75, 796, 807
Sau96I GGNCC 4 cut(s) 107, 280, 384, 545
ScrFI CCNGG 4 cut(s) 298, 434, 703, 739
SduI GDGCHC 2 cut(s) 458, 985
SfaNI GCATC 1 cut(s) 31
SfoI GGCGCC 1 cut(s) 1010
Sfr303I CCGCGG 2 cut(s) 119, 183
SgrBI CCGCGG 2 cut(s) 119, 183
SinI GGWCC 2 cut(s) 280, 384
SmiMI CAYNNNNRTG 1 cut(s) 260
SpeI ACTAGT 2 cut(s) 268, 1045
Sse9I AATT 1 cut(s) 417
SseBI AGGCCT 1 cut(s) 437
SsiI CCGC 7 cut(s) 116, 118, 180, 182, 260, 887, 1013
SspDI GGCGCC 1 cut(s) 1008
SspMI CTAG 3 cut(s) 269, 824, 1046
StuI AGGCCT 1 cut(s) 437
StyD4I CCNGG 4 cut(s) 296, 432, 701, 737
StyI CCWWGG 1 cut(s) 408
TaaI ACNGT 2 cut(s) 188, 230
TaiI ACGT 3 cut(s) 32, 279, 601
TaqI TCGA 4 cut(s) 66, 365, 390, 503
TasI AATT 1 cut(s) 417
TauI GCSGC 1 cut(s) 121
TfiI GAWTC 3 cut(s) 208, 448, 914
Tru1I TTAA 2 cut(s) 222, 900
Tru9I TTAA 2 cut(s) 222, 900
TscAI CASTG 3 cut(s) 726, 946, 1115
TseFI GTSAC 3 cut(s) 253, 554, 1097
TseI GCWGC 3 cut(s) 80, 334, 869
Tsp45I GTSAC 3 cut(s) 253, 554, 1097
TspDTI ATGAA 1 cut(s) 411
TspGWI ACGGA 2 cut(s) 355, 573
TspRI CASTG 3 cut(s) 726, 946, 1115
VpaK11BI GGWCC 2 cut(s) 280, 384
XceI RCATGY 1 cut(s) 1019
XcmI CCANNNNNNNNNTGG 1 cut(s) 539
XmiI GTMKAC 1 cut(s) 32
XspI CTAG 3 cut(s) 269, 824, 1046
ZraI GACGTC 1 cut(s) 599
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.