Rmu_ssc0000400.1_g000085

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000400.1
OG0000057
Physical Location & Seq
Reverse (-)
316526 .. 318393
1868 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000400.1_g000085.1.cds

Sequence Viewer

Length: 1242 bp
atgatgggggttaagcggcgagatgaaggacctctctcgaatcaatcaatcccagcgattacaaagcctccccggagcaaaccttcaacctcgttgaaacccggtgaccccccgccagtcctagtctcctcgcgagccgactgtcagcctcaccagatcaacccggcgaccgtactttcagtcccagtctccccaggagccgactgcaagcacaaccgccactgttacttccagcgaagcaaggcgcttgaagaagaagtcaggtcacgggactaccccaacgactgcacccagcggtgctgcgataacccctaccaaaagggctacgctaactgctcaaagcataagacctccagttacagaccgcattctcgcaagtactgtcgtggtctctctgaagaacaagtgacgcaacggttctctcttcagcctcaatcacccggtatgtcaactgcacaagatgagaatccctcgaccgcgactgaaggtcagagcgtcaatgttaatcaggccagcgagcctgttattcccgctgctaacaacaccgcagtggaaagtagagaagaagaggcttttgtattgaagcctatcccggagggagcgaccatcgaggaaacactcgcgatcctcatggagaatgtcgagaaccatcgcaagaagatggacgctgatgttgccagagaaaccgcaaaatcagaaaggctcctccgcgaaattgagcagcgtatgactctacatacggagaatacccggcagcagattacacaaacagagagtgctttgaaggtgcaagatgcaaccatctctgccgaacaggatcagcgtcataggacaattttgaacgctatagcggagcataccaagcaaaccgcgtcgaacatggtagatcttcgcaaggatggggccaacctggcaactgaggtggctatgcagagagccgaattgaaccaggcgagagatgtactgaacaaggccttaggggatcctaatgctatccttggctctcttggccagccatctggttcaggcaagtacttgccaccaaatcagcgcgagaagaccaaccaaaatgctggttcttcctcagctactgttgctactgctccatcgaagaacaaagaacaagccttggttattaatggcagcaaagaaaagactgcttcatcaagcggacaggctaccaagaaacaccaagtctcgaagggtgcaggaactgcgtcagaacctgtgacgttcgtctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

413

Amino Acids

45.05

Weight (kDa)

8.67

Isoelectric Point (pI)

54.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 6 cut(s) 133, 479, 623, 711, 872, 1053
AclWI GGATC 4 cut(s) 619, 825, 977, 990
AcoI YGGCCR 1 cut(s) 1009
AcuI CTGAAG 3 cut(s) 410, 417, 504
AfaI GTAC 4 cut(s) 174, 380, 963, 1034
AgsI TTSAA 7 cut(s) 87, 97, 251, 583, 784, 841, 946
AhdI GACNNNNNGTC 1 cut(s) 486
AjnI CCWGG 3 cut(s) 193, 909, 948
AleI CACNNNNGTG 1 cut(s) 548
AluBI AGCT 1 cut(s) 1088
AluI AGCT 1 cut(s) 1088
Alw26I GTCTC 4 cut(s) 130, 193, 395, 1201
AlwI GGATC 4 cut(s) 619, 825, 977, 990
AlwNI CAGNNNCTG 3 cut(s) 1091, 1214, 1226
AoxI GGCC 4 cut(s) 510, 903, 972, 1009
ApeKI GCWGC 5 cut(s) 300, 533, 721, 754, 1143
AseI ATTAAT 1 cut(s) 1137
AspLEI GCGC 2 cut(s) 247, 1053
AspS9I GGNCC 2 cut(s) 29, 903
AsuC2I CCSGG 6 cut(s) 73, 102, 164, 441, 593, 751
AsuHPI GGTGA 3 cut(s) 116, 143, 429
AvaII GGWCC 1 cut(s) 29
AxyI CCTNAGG 1 cut(s) 976
BalI TGGCCA 1 cut(s) 1011
BamHI GGATCC 1 cut(s) 982
BbsI GAAGAC 1 cut(s) 1064
BbvCI CCTCAGC 1 cut(s) 1084
BbvI GCAGC 5 cut(s) 287, 520, 733, 766, 1155
BccI CCATC 7 cut(s) 614, 655, 657, 809, 893, 1024, 1114
BciT130I CCWGG 3 cut(s) 195, 911, 950
BcnI CCSGG 6 cut(s) 73, 102, 164, 441, 593, 751
BcoDI GTCTC 4 cut(s) 130, 193, 395, 1201
BfaI CTAG 2 cut(s) 122, 1240
BfmI CTRYAG 1 cut(s) 846
BfoI RGCGCY 1 cut(s) 248
BglI GCCNNNNNGGC 1 cut(s) 911
BglII AGATCT 1 cut(s) 886
BisI GCNGC 6 cut(s) 17, 301, 534, 722, 755, 1144
BlsI GCNGC 6 cut(s) 18, 302, 535, 723, 756, 1145
BmcAI AGTACT 2 cut(s) 380, 1034
Bme1390I CCNGG 9 cut(s) 73, 102, 164, 195, 441, 593, 751, 911, 950
Bme18I GGWCC 1 cut(s) 29
BmeRI GACNNNNNGTC 1 cut(s) 486
BmgT120I GGNCC 2 cut(s) 29, 903
BmiI GGNNCC 4 cut(s) 199, 704, 904, 984
BmrFI CCNGG 9 cut(s) 73, 102, 164, 195, 441, 593, 751, 911, 950
BmrI ACTGGG 1 cut(s) 179
BmsI GCATC 1 cut(s) 784
BmuI ACTGGG 1 cut(s) 179
BoxI GACNNNNGTC 1 cut(s) 1235
BpiI GAAGAC 1 cut(s) 1064
BplI GAGNNNNNCTC 2 cut(s) 455, 487
BpmI CTGGAG 1 cut(s) 337
Bpu10I CCTNAGC 1 cut(s) 1084
BpuMI CCSGG 6 cut(s) 73, 102, 164, 441, 593, 751
BsaBI GATNNNNATC 1 cut(s) 465
BsaI GGTCTC 1 cut(s) 395
BsaJI CCNNGG 4 cut(s) 71, 193, 997, 1128
BsaXI ACNNNNNCTCC 2 cut(s) 52, 82
Bse1I ACTGG 3 cut(s) 116, 185, 354
Bse21I CCTNAGG 1 cut(s) 976
Bse8I GATNNNNATC 1 cut(s) 465
BseBI CCWGG 3 cut(s) 195, 911, 950
BseDI CCNNGG 4 cut(s) 71, 193, 997, 1128
BseGI GGATG 1 cut(s) 904
BseJI GATNNNNATC 1 cut(s) 465
BseMII CTCAG 2 cut(s) 909, 1098
BseNI ACTGG 3 cut(s) 116, 185, 354
BseRI GAGGAG 2 cut(s) 118, 695
BseXI GCAGC 5 cut(s) 287, 520, 733, 766, 1155
BseYI CCCAGC 2 cut(s) 52, 291
BsgI GTGCAG 3 cut(s) 271, 438, 1227
Bsh1236I CGCG 6 cut(s) 133, 479, 623, 711, 872, 1053
Bsh1285I CGRYCG 2 cut(s) 171, 477
BshFI GGCC 4 cut(s) 512, 905, 974, 1011
BsiEI CGRYCG 2 cut(s) 171, 477
BsiSI CCGG 6 cut(s) 73, 102, 164, 441, 593, 751
BslFI GGGAC 2 cut(s) 167, 284
BsmAI GTCTC 4 cut(s) 130, 193, 395, 1201
BsmFI GGGAC 2 cut(s) 167, 284
BsmI GAATGC 1 cut(s) 367
BsnI GGCC 4 cut(s) 512, 905, 974, 1011
Bso31I GGTCTC 1 cut(s) 395
Bsp143I GATC 5 cut(s) 156, 624, 817, 886, 982
Bsp68I TCGCGA 2 cut(s) 133, 623
BspANI GGCC 4 cut(s) 512, 905, 974, 1011
BspCNI CTCAG 2 cut(s) 910, 1097
BspFNI CGCG 6 cut(s) 133, 479, 623, 711, 872, 1053
BspLI GGNNCC 4 cut(s) 199, 704, 904, 984
BspPI GGATC 4 cut(s) 619, 825, 977, 990
BspTNI GGTCTC 1 cut(s) 395
BsrI ACTGG 3 cut(s) 116, 185, 354
BssECI CCNNGG 4 cut(s) 71, 193, 997, 1128
BssMI GATC 5 cut(s) 156, 624, 817, 886, 982
BssT1I CCWWGG 2 cut(s) 997, 1128
Bst2UI CCWGG 3 cut(s) 195, 911, 950
Bst4CI ACNGT 6 cut(s) 143, 172, 224, 383, 417, 1093
Bst6I CTCTTC 2 cut(s) 429, 561
BstAPI GCANNNNNTGC 1 cut(s) 1214
BstC8I GCNNGC 5 cut(s) 135, 209, 514, 518, 1013
BstDEI CTNAG 3 cut(s) 918, 976, 1084
BstEII GGTNACC 1 cut(s) 104
BstF5I GGATG 1 cut(s) 904
BstFNI CGCG 6 cut(s) 133, 479, 623, 711, 872, 1053
BstH2I RGCGCY 1 cut(s) 248
BstHHI GCGC 2 cut(s) 247, 1053
BstKTI GATC 5 cut(s) 159, 627, 820, 889, 985
BstMAI GTCTC 4 cut(s) 130, 193, 395, 1201
BstMBI GATC 5 cut(s) 156, 624, 817, 886, 982
BstMCI CGRYCG 2 cut(s) 171, 477
BstMWI GCNNNNNNNGC 6 cut(s) 674, 862, 911, 1008, 1094, 1214
BstNI CCWGG 3 cut(s) 195, 911, 950
BstPAI GACNNNNGTC 1 cut(s) 1235
BstPI GGTNACC 1 cut(s) 104
BstSCI CCNGG 9 cut(s) 71, 100, 162, 193, 439, 591, 749, 909, 948
BstSFI CTRYAG 1 cut(s) 846
BstUI CGCG 6 cut(s) 133, 479, 623, 711, 872, 1053
BstV1I GCAGC 5 cut(s) 287, 520, 733, 766, 1155
BstV2I GAAGAC 1 cut(s) 1064
BstX2I RGATCY 2 cut(s) 886, 982
BstXI CCANNNNNNTGG 2 cut(s) 1019, 1073
BstYI RGATCY 2 cut(s) 886, 982
Bsu36I CCTNAGG 1 cut(s) 976
BsuRI GGCC 4 cut(s) 512, 905, 974, 1011
BtgZI GCGATG 1 cut(s) 635
BtsCI GGATG 1 cut(s) 904
BtsI GCAGTG 1 cut(s) 555
BtsIMutI CAGTG 2 cut(s) 220, 555
BtuMI TCGCGA 2 cut(s) 133, 623
Cac8I GCNNGC 5 cut(s) 135, 209, 514, 518, 1013
CaiI CAGNNNCTG 3 cut(s) 1091, 1214, 1226
CfoI GCGC 2 cut(s) 247, 1053
Cfr13I GGNCC 2 cut(s) 29, 903
CseI GACGC 6 cut(s) 418, 484, 674, 812, 861, 1206
Csp6I GTAC 4 cut(s) 173, 379, 962, 1033
CspCI CAANNNNNGTGG 2 cut(s) 903, 938
CviAII CATG 2 cut(s) 631, 880
CviQI GTAC 4 cut(s) 173, 379, 962, 1033
DdeI CTNAG 3 cut(s) 918, 976, 1084
DpnI GATC 5 cut(s) 158, 626, 819, 888, 984
DpnII GATC 5 cut(s) 156, 624, 817, 886, 982
DriI GACNNNNNGTC 1 cut(s) 486
EaeI YGGCCR 1 cut(s) 1009
Eam1104I CTCTTC 2 cut(s) 429, 561
Eam1105I GACNNNNNGTC 1 cut(s) 486
EarI CTCTTC 2 cut(s) 429, 561
Eco130I CCWWGG 2 cut(s) 997, 1128
Eco147I AGGCCT 1 cut(s) 974
Eco31I GGTCTC 1 cut(s) 395
Eco47I GGWCC 1 cut(s) 29
Eco57I CTGAAG 3 cut(s) 410, 417, 504
Eco81I CCTNAGG 1 cut(s) 976
Eco91I GGTNACC 1 cut(s) 104
EcoO109I RGGNCCY 1 cut(s) 29
EcoO65I GGTNACC 1 cut(s) 104
EcoRII CCWGG 3 cut(s) 193, 909, 948
EcoT14I CCWWGG 2 cut(s) 997, 1128
ErhI CCWWGG 2 cut(s) 997, 1128
FaeI CATG 2 cut(s) 634, 883
FaqI GGGAC 2 cut(s) 167, 284
FatI CATG 2 cut(s) 630, 879
FauI CCCGC 2 cut(s) 120, 538
Fnu4HI GCNGC 6 cut(s) 17, 301, 534, 722, 755, 1144
FokI GGATG 1 cut(s) 911
Fsp4HI GCNGC 6 cut(s) 17, 301, 534, 722, 755, 1144
FspBI CTAG 2 cut(s) 122, 1240
GlaI GCGC 2 cut(s) 246, 1052
GluI GCNGC 6 cut(s) 17, 301, 534, 722, 755, 1144
GsaI CCCAGC 2 cut(s) 56, 295
GsuI CTGGAG 1 cut(s) 337
HaeII RGCGCY 1 cut(s) 248
HaeIII GGCC 4 cut(s) 512, 905, 974, 1011
HapII CCGG 6 cut(s) 73, 102, 164, 441, 593, 751
HgaI GACGC 6 cut(s) 418, 484, 674, 812, 861, 1206
HhaI GCGC 2 cut(s) 247, 1053
Hin1II CATG 2 cut(s) 634, 883
Hin6I GCGC 2 cut(s) 245, 1051
HinP1I GCGC 2 cut(s) 245, 1051
HincII GTYRAC 1 cut(s) 450
HindII GTYRAC 1 cut(s) 450
HinfI GANTC 3 cut(s) 40, 466, 730
HpaII CCGG 6 cut(s) 73, 102, 164, 441, 593, 751
HphI GGTGA 3 cut(s) 116, 143, 429
Hpy166II GTNNAC 1 cut(s) 450
Hpy188I TCNGA 4 cut(s) 397, 492, 697, 1222
Hpy188III TCNNGA 5 cut(s) 37, 132, 622, 643, 1198
Hpy8I GTNNAC 1 cut(s) 450
Hpy99I CGWCG 1 cut(s) 877
HpyAV CCTTC 5 cut(s) 20, 93, 479, 778, 1195
HpyCH4III ACNGT 6 cut(s) 143, 172, 224, 383, 417, 1093
HpyCH4IV ACGT 1 cut(s) 1232
HpyCH4V TGCA 7 cut(s) 207, 288, 455, 790, 797, 931, 1208
HpyF10VI GCNNNNNNNGC 6 cut(s) 674, 862, 911, 1008, 1094, 1214
HpyF3I CTNAG 3 cut(s) 918, 976, 1084
HpySE526I ACGT 1 cut(s) 1232
Hsp92II CATG 2 cut(s) 634, 883
HspAI GCGC 2 cut(s) 245, 1051
Kzo9I GATC 5 cut(s) 156, 624, 817, 886, 982
LmnI GCTCC 6 cut(s) 75, 197, 599, 708, 853, 1108
Lsp1109I GCAGC 5 cut(s) 287, 520, 733, 766, 1155
LweI GCATC 1 cut(s) 784
MaeI CTAG 2 cut(s) 122, 1240
MaeII ACGT 1 cut(s) 1232
MaeIII GTNAC 6 cut(s) 104, 224, 264, 356, 406, 1228
MalI GATC 5 cut(s) 158, 626, 819, 888, 984
MboI GATC 5 cut(s) 156, 624, 817, 886, 982
MflI RGATCY 2 cut(s) 886, 982
MlsI TGGCCA 1 cut(s) 1011
MluCI AATT 3 cut(s) 714, 834, 941
MluNI TGGCCA 1 cut(s) 1011
MlyI GAGTC 1 cut(s) 724
Mox20I TGGCCA 1 cut(s) 1011
MscI TGGCCA 1 cut(s) 1011
MseI TTAA 3 cut(s) 12, 504, 1137
MslI CAYNNNNRTG 1 cut(s) 548
Msp20I TGGCCA 1 cut(s) 1011
MspA1I CMGCKG 2 cut(s) 295, 533
MspI CCGG 6 cut(s) 73, 102, 164, 441, 593, 751
MspR9I CCNGG 9 cut(s) 73, 102, 164, 195, 441, 593, 751, 911, 950
Mva1269I GAATGC 1 cut(s) 367
MvaI CCWGG 3 cut(s) 195, 911, 950
MvnI CGCG 6 cut(s) 133, 479, 623, 711, 872, 1053
MwoI GCNNNNNNNGC 6 cut(s) 674, 862, 911, 1008, 1094, 1214
NciI CCSGG 6 cut(s) 73, 102, 164, 441, 593, 751
NdeII GATC 5 cut(s) 156, 624, 817, 886, 982
NlaIII CATG 2 cut(s) 634, 883
NlaIV GGNNCC 4 cut(s) 199, 704, 904, 984
NmuCI GTSAC 4 cut(s) 104, 264, 406, 1228
NruI TCGCGA 2 cut(s) 133, 623
OliI CACNNNNGTG 1 cut(s) 548
PceI AGGCCT 1 cut(s) 974
PctI GAATGC 1 cut(s) 367
PfeI GAWTC 2 cut(s) 40, 466
PfoI TCCNGGA 1 cut(s) 591
PkrI GCNGC 6 cut(s) 18, 302, 535, 723, 756, 1145
PleI GAGTC 1 cut(s) 724
PpsI GAGTC 1 cut(s) 724
PpuMI RGGWCCY 1 cut(s) 29
PshAI GACNNNNGTC 1 cut(s) 1235
PshBI ATTAAT 1 cut(s) 1137
Psp5II RGGWCCY 1 cut(s) 29
Psp6I CCWGG 3 cut(s) 193, 909, 948
PspEI GGTNACC 1 cut(s) 104
PspFI CCCAGC 2 cut(s) 52, 291
PspGI CCWGG 3 cut(s) 193, 909, 948
PspN4I GGNNCC 4 cut(s) 199, 704, 904, 984
PspPI GGNCC 2 cut(s) 29, 903
PspPPI RGGWCCY 1 cut(s) 29
PstNI CAGNNNCTG 3 cut(s) 1091, 1214, 1226
PsuI RGATCY 2 cut(s) 886, 982
RruI TCGCGA 2 cut(s) 133, 623
RsaI GTAC 4 cut(s) 174, 380, 963, 1034
RsaNI GTAC 4 cut(s) 173, 379, 962, 1033
RseI CAYNNNNRTG 1 cut(s) 548
SaqAI TTAA 3 cut(s) 12, 504, 1137
SatI GCNGC 6 cut(s) 17, 301, 534, 722, 755, 1144
Sau3AI GATC 5 cut(s) 156, 624, 817, 886, 982
Sau96I GGNCC 2 cut(s) 29, 903
ScaI AGTACT 2 cut(s) 380, 1034
SchI GAGTC 1 cut(s) 724
ScrFI CCNGG 9 cut(s) 73, 102, 164, 195, 441, 593, 751, 911, 950
SfaNI GCATC 1 cut(s) 784
SfcI CTRYAG 1 cut(s) 846
SinI GGWCC 1 cut(s) 29
SmiMI CAYNNNNRTG 1 cut(s) 548
Sse9I AATT 3 cut(s) 714, 834, 941
SseBI AGGCCT 1 cut(s) 974
SspMI CTAG 2 cut(s) 122, 1240
StuI AGGCCT 1 cut(s) 974
StyD4I CCNGG 9 cut(s) 71, 100, 162, 193, 439, 591, 749, 909, 948
StyI CCWWGG 2 cut(s) 997, 1128
TaaI ACNGT 6 cut(s) 143, 172, 224, 383, 417, 1093
TaiI ACGT 1 cut(s) 1235
TaqI TCGA 7 cut(s) 38, 473, 609, 642, 875, 1109, 1199
TasI AATT 3 cut(s) 714, 834, 941
TatI WGTACW 3 cut(s) 378, 961, 1032
TauI GCSGC 1 cut(s) 19
TfiI GAWTC 2 cut(s) 40, 466
Tru1I TTAA 3 cut(s) 12, 504, 1137
Tru9I TTAA 3 cut(s) 12, 504, 1137
TscAI CASTG 2 cut(s) 227, 555
TseFI GTSAC 4 cut(s) 104, 264, 406, 1228
TseI GCWGC 5 cut(s) 300, 533, 721, 754, 1143
Tsp45I GTSAC 4 cut(s) 104, 264, 406, 1228
TspDTI ATGAA 2 cut(s) 39, 1152
TspGWI ACGGA 1 cut(s) 755
TspRI CASTG 2 cut(s) 227, 555
VpaK11BI GGWCC 1 cut(s) 29
VspI ATTAAT 1 cut(s) 1137
XspI CTAG 2 cut(s) 122, 1240
ZrmI AGTACT 2 cut(s) 380, 1034
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.