Rmu_sc0000146.1_g000006

Sister chromatid cohesion protein PDS5 homolog

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000146.1
Physical Location & Seq
Forward (+)
17329 .. 18804
1476 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000146.1_g000006.1.cds

Sequence Viewer

Length: 1416 bp
atgattcagtcgatgagagaactcatcacagaggtgggcagtttcgagcatctcctcagagaaacagatgcgaggaagaatgcctccagaggaacgtacgtgccaggtaaacatcgtaccctagcagccctgagctaccaaccggccacctacgacccttattaccatcataacgctgaagaagtggtccaggatgatgaagaggacgaggataatgatatagcggcctacgagttaaccgggaaaaagaatccgtccttgaaacagctgaaaatttccaaggaacctgttaagctcaaatcgatggcctttaccaaaccagagtttgcgacatatacttatgattccaataaggcccacgagatccttgacgagatgatcgctgcgaagatggtgaagactgattttggaccttttccgcggccagagcagttgaaggggaagaaatattgcaagttccataatctgtggaatcacaataccgcggactatgtaaagctcaaagaccagattcaggtatggcttaataatggtagtttgcaggtagaggctccagtcacagcggcggcactagttgacgtagatccctttccagacactgggatcaacatggtcaacgtagattggaccaaacagcagcgacggaaaccaactctggatttgggttcgaatgagcagagtgagaagtccatcgcggatgagacacccacaaaggaatgcgatattcaagtgtcgcacgaagaggtcgagcagacatttcactttggctctctaccaccaatcaagtgggcttcgtcgtcgcggaactatcagccttccagtccaagagaaagggagaagacggaatcaccaccatcccccaaagactccaacttattcatgaaactgaaagcaaccgcaagcagtccgaaacaagagagggccaggagcgagtgcaagaatattctgaccatgccctacataccacctgcttcaactaaccctatcaaggagggcaaatggtacaccagggaaaagggcaaggcggtggagattagctcgtccagaaaaaggaagctacaacgcaggtttggggaagccaagcgcgctctagaggctctagatcagggcctgatcaagccttcacaactggtcaagtcgcccgagcaataccagagagagatggaggctttggctgctaaaccgttgagacctccccgtagctttaacaaacaaacagattcactaacagaggcctcaaagcccagtgtgttttgcaggattactgaggagcgctcacctcctcttgcacgaatagagaactcgccagctcggcggccacatgtcaagcgtaggcttttccgtgaggagccagtggtcaaagcttcggtctttgacaaactggggggcaaggacagggctagcgacaccctatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

471

Amino Acids

53.66

Weight (kDa)

9.1

Isoelectric Point (pI)

61.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 976
Acc36I ACCTGC 3 cut(s) 532, 976, 1056
AccB7I CCANNNNNTGG 1 cut(s) 599
AccII CGCG 5 cut(s) 421, 485, 695, 802, 1086
AclWI GGATC 3 cut(s) 358, 578, 611
AcoI YGGCCR 3 cut(s) 144, 422, 1316
AcsI RAATTY 1 cut(s) 273
AcuI CTGAAG 1 cut(s) 198
AfaI GTAC 3 cut(s) 98, 118, 1004
AfeI AGCGCT 1 cut(s) 1274
AfiI CCNNNNNNNGG 4 cut(s) 514, 599, 988, 1050
AflIII ACRYGT 1 cut(s) 1321
AgsI TTSAA 4 cut(s) 262, 436, 728, 975
AhlI ACTAGT 1 cut(s) 571
AjnI CCWGG 4 cut(s) 103, 189, 923, 1007
AleI CACNNNNGTG 1 cut(s) 32
AluBI AGCT 9 cut(s) 135, 268, 295, 499, 1038, 1057, 1203, 1310, 1364
AluI AGCT 9 cut(s) 135, 268, 295, 499, 1038, 1057, 1203, 1310, 1364
Alw26I GTCTC 2 cut(s) 695, 1183
AlwI GGATC 3 cut(s) 358, 578, 611
AlwNI CAGNNNCTG 2 cut(s) 599, 1111
Ama87I CYCGRG 1 cut(s) 1142
Aor51HI AGCGCT 1 cut(s) 1274
AoxI GGCC 9 cut(s) 144, 225, 306, 354, 422, 921, 1108, 1233, 1316
ApeKI GCWGC 4 cut(s) 125, 383, 637, 1175
ApoI RAATTY 1 cut(s) 273
ArsI GACNNNNNNTTYG 2 cut(s) 1353, 1385
AspLEI GCGC 3 cut(s) 1086, 1088, 1275
AspS9I GGNCC 6 cut(s) 187, 355, 410, 627, 921, 1108
AsuC2I CCSGG 1 cut(s) 241
AsuHPI GGTGA 3 cut(s) 406, 840, 1269
AsuII TTCGAA 1 cut(s) 668
AsuNHI GCTAGC 1 cut(s) 1400
AvaI CYCGRG 1 cut(s) 1142
AvaII GGWCC 3 cut(s) 187, 410, 627
BauI CACGAG 1 cut(s) 359
BbsI GAAGAC 2 cut(s) 404, 845
BbvI GCAGC 4 cut(s) 137, 370, 649, 1162
BccI CCATC 6 cut(s) 174, 298, 385, 698, 862, 1156
BciT130I CCWGG 4 cut(s) 105, 191, 925, 1009
BclI TGATCA 1 cut(s) 1113
BcnI CCSGG 1 cut(s) 241
BcoDI GTCTC 2 cut(s) 695, 1183
BcuI ACTAGT 1 cut(s) 571
BfaI CTAG 5 cut(s) 122, 572, 1091, 1100, 1401
BfmI CTRYAG 1 cut(s) 1412
BfoI RGCGCY 1 cut(s) 1276
BfuAI ACCTGC 3 cut(s) 532, 976, 1056
BglI GCCNNNNNGGC 1 cut(s) 1312
BisI GCNGC 9 cut(s) 126, 225, 384, 422, 564, 567, 638, 1176, 1316
BlsI GCNGC 9 cut(s) 127, 226, 385, 423, 565, 568, 639, 1177, 1317
Bme1390I CCNGG 5 cut(s) 105, 191, 241, 925, 1009
Bme18I GGWCC 3 cut(s) 187, 410, 627
BmeT110I CYCGRG 1 cut(s) 1142
BmgT120I GGNCC 6 cut(s) 187, 355, 410, 627, 921, 1108
BmiI GGNNCC 3 cut(s) 285, 552, 1350
BmrFI CCNGG 5 cut(s) 105, 191, 241, 925, 1009
BmrI ACTGGG 3 cut(s) 609, 1239, 1391
BmsI GCATC 2 cut(s) 58, 58
BmtI GCTAGC 1 cut(s) 1404
BmuI ACTGGG 3 cut(s) 609, 1239, 1391
BpiI GAAGAC 2 cut(s) 404, 845
BplI GAGNNNNNCTC 4 cut(s) 1022, 1054, 1259, 1291
BpmI CTGGAG 2 cut(s) 70, 537
Bpu10I CCTNAGC 1 cut(s) 131
Bpu14I TTCGAA 1 cut(s) 668
BpuMI CCSGG 1 cut(s) 241
Bsa29I ATCGAT 1 cut(s) 302
BsaAI YACGTR 1 cut(s) 100
BsaI GGTCTC 1 cut(s) 1183
BsaJI CCNNGG 4 cut(s) 279, 419, 483, 1008
Bsc4I CCNNNNNNNGG 4 cut(s) 514, 599, 988, 1050
Bse118I RCCGGY 1 cut(s) 142
Bse1I ACTGG 7 cut(s) 554, 604, 819, 1134, 1245, 1352, 1386
BseBI CCWGG 4 cut(s) 105, 191, 925, 1009
BseCI ATCGAT 1 cut(s) 302
BseDI CCNNGG 4 cut(s) 279, 419, 483, 1008
BseGI GGATG 3 cut(s) 199, 703, 854
BseLI CCNNNNNNNGG 4 cut(s) 514, 599, 988, 1050
BseMII CTCAG 3 cut(s) 70, 122, 1257
BseNI ACTGG 7 cut(s) 554, 604, 819, 1134, 1245, 1352, 1386
BsePI GCGCGC 1 cut(s) 1084
BseRI GAGGAG 4 cut(s) 44, 1272, 1283, 1361
BseXI GCAGC 4 cut(s) 137, 370, 649, 1162
Bsh1236I CGCG 5 cut(s) 421, 485, 695, 802, 1086
BshFI GGCC 9 cut(s) 146, 227, 308, 356, 424, 923, 1110, 1235, 1318
BshVI ATCGAT 1 cut(s) 302
BsiHKCI CYCGRG 1 cut(s) 1142
BsiSI CCGG 2 cut(s) 143, 240
BsiWI CGTACG 1 cut(s) 96
BslI CCNNNNNNNGG 4 cut(s) 514, 599, 988, 1050
BsmAI GTCTC 2 cut(s) 695, 1183
BsmI GAATGC 2 cut(s) 85, 722
BsnI GGCC 9 cut(s) 146, 227, 308, 356, 424, 923, 1110, 1235, 1318
Bso31I GGTCTC 1 cut(s) 1183
BsoBI CYCGRG 1 cut(s) 1142
Bsp119I TTCGAA 1 cut(s) 668
Bsp143I GATC 6 cut(s) 363, 378, 583, 603, 1102, 1113
BspANI GGCC 9 cut(s) 146, 227, 308, 356, 424, 923, 1110, 1235, 1318
BspCNI CTCAG 3 cut(s) 69, 123, 1258
BspDI ATCGAT 1 cut(s) 302
BspFNI CGCG 5 cut(s) 421, 485, 695, 802, 1086
BspHI TCATGA 1 cut(s) 879
BspLI GGNNCC 3 cut(s) 285, 552, 1350
BspMI ACCTGC 3 cut(s) 532, 976, 1056
BspOI GCTAGC 1 cut(s) 1404
BspPI GGATC 3 cut(s) 358, 578, 611
BspT104I TTCGAA 1 cut(s) 668
BspTNI GGTCTC 1 cut(s) 1183
BsrFI RCCGGY 1 cut(s) 142
BsrI ACTGG 7 cut(s) 554, 604, 819, 1134, 1245, 1352, 1386
BssAI RCCGGY 1 cut(s) 142
BssECI CCNNGG 4 cut(s) 279, 419, 483, 1008
BssHII GCGCGC 1 cut(s) 1084
BssMI GATC 6 cut(s) 363, 378, 583, 603, 1102, 1113
BssSI CACGAG 1 cut(s) 359
BssT1I CCWWGG 1 cut(s) 279
Bst2BI CACGAG 1 cut(s) 359
Bst2UI CCWGG 4 cut(s) 105, 191, 925, 1009
Bst4CI ACNGT 1 cut(s) 1185
Bst6I CTCTTC 2 cut(s) 195, 735
BstBAI YACGTR 1 cut(s) 100
BstBI TTCGAA 1 cut(s) 668
BstC8I GCNNGC 4 cut(s) 901, 1086, 1308, 1402
BstDEI CTNAG 3 cut(s) 56, 131, 1266
BstDSI CCRYGG 2 cut(s) 419, 483
BstF5I GGATG 3 cut(s) 199, 703, 854
BstFNI CGCG 5 cut(s) 421, 485, 695, 802, 1086
BstH2I RGCGCY 1 cut(s) 1276
BstHHI GCGC 3 cut(s) 1086, 1088, 1275
BstKTI GATC 6 cut(s) 366, 381, 586, 606, 1105, 1116
BstMAI GTCTC 2 cut(s) 695, 1183
BstMBI GATC 6 cut(s) 363, 378, 583, 603, 1102, 1113
BstMWI GCNNNNNNNGC 5 cut(s) 427, 1085, 1094, 1175, 1312
BstNI CCWGG 4 cut(s) 105, 191, 925, 1009
BstNSI RCATGY 1 cut(s) 1325
BstSCI CCNGG 5 cut(s) 103, 189, 239, 923, 1007
BstSFI CTRYAG 1 cut(s) 1412
BstUI CGCG 5 cut(s) 421, 485, 695, 802, 1086
BstV1I GCAGC 4 cut(s) 137, 370, 649, 1162
BstV2I GAAGAC 2 cut(s) 404, 845
BstX2I RGATCY 2 cut(s) 363, 583
BstXI CCANNNNNNTGG 1 cut(s) 786
BstYI RGATCY 2 cut(s) 363, 583
Bsu15I ATCGAT 1 cut(s) 302
BsuRI GGCC 9 cut(s) 146, 227, 308, 356, 424, 923, 1110, 1235, 1318
BsuTUI ATCGAT 1 cut(s) 302
BtgI CCRYGG 2 cut(s) 419, 483
BtgZI GCGATG 1 cut(s) 676
BtsCI GGATG 3 cut(s) 199, 703, 854
BtsIMutI CAGTG 3 cut(s) 597, 1252, 1359
BveI ACCTGC 3 cut(s) 532, 976, 1056
Cac8I GCNNGC 4 cut(s) 901, 1086, 1308, 1402
CaiI CAGNNNCTG 2 cut(s) 599, 1111
CciI TCATGA 1 cut(s) 879
CfoI GCGC 3 cut(s) 1086, 1088, 1275
Cfr10I RCCGGY 1 cut(s) 142
Cfr13I GGNCC 6 cut(s) 187, 355, 410, 627, 921, 1108
Cfr42I CCGCGG 2 cut(s) 422, 486
ClaI ATCGAT 1 cut(s) 302
Csp6I GTAC 3 cut(s) 97, 117, 1003
CviAII CATG 4 cut(s) 610, 880, 952, 1322
CviQI GTAC 3 cut(s) 97, 117, 1003
DdeI CTNAG 3 cut(s) 56, 131, 1266
DpnI GATC 6 cut(s) 365, 380, 585, 605, 1104, 1115
DpnII GATC 6 cut(s) 363, 378, 583, 603, 1102, 1113
EaeI YGGCCR 3 cut(s) 144, 422, 1316
Eam1104I CTCTTC 2 cut(s) 195, 735
EarI CTCTTC 2 cut(s) 195, 735
Eco130I CCWWGG 1 cut(s) 279
Eco147I AGGCCT 1 cut(s) 1235
Eco31I GGTCTC 1 cut(s) 1183
Eco47I GGWCC 3 cut(s) 187, 410, 627
Eco47III AGCGCT 1 cut(s) 1274
Eco57I CTGAAG 1 cut(s) 198
Eco88I CYCGRG 1 cut(s) 1142
EcoO109I RGGNCCY 1 cut(s) 1108
EcoRII CCWGG 4 cut(s) 103, 189, 923, 1007
EcoT14I CCWWGG 1 cut(s) 279
ErhI CCWWGG 1 cut(s) 279
FaeI CATG 4 cut(s) 613, 883, 955, 1325
FatI CATG 4 cut(s) 609, 879, 951, 1321
FbaI TGATCA 1 cut(s) 1113
Fnu4HI GCNGC 9 cut(s) 126, 225, 384, 422, 564, 567, 638, 1176, 1316
FokI GGATG 3 cut(s) 206, 710, 841
Fsp4HI GCNGC 9 cut(s) 126, 225, 384, 422, 564, 567, 638, 1176, 1316
FspBI CTAG 5 cut(s) 122, 572, 1091, 1100, 1401
GlaI GCGC 3 cut(s) 1085, 1087, 1274
GluI GCNGC 9 cut(s) 126, 225, 384, 422, 564, 567, 638, 1176, 1316
GsuI CTGGAG 2 cut(s) 70, 537
HaeII RGCGCY 1 cut(s) 1276
HaeIII GGCC 9 cut(s) 146, 227, 308, 356, 424, 923, 1110, 1235, 1318
HapII CCGG 2 cut(s) 143, 240
HhaI GCGC 3 cut(s) 1086, 1088, 1275
Hin1II CATG 4 cut(s) 613, 883, 955, 1325
Hin6I GCGC 3 cut(s) 1084, 1086, 1273
HinP1I GCGC 3 cut(s) 1084, 1086, 1273
HincII GTYRAC 3 cut(s) 237, 577, 616
HindII GTYRAC 3 cut(s) 237, 577, 616
HindIII AAGCTT 1 cut(s) 1362
HinfI GANTC 8 cut(s) 4, 250, 344, 472, 511, 845, 866, 1220
HpaI GTTAAC 1 cut(s) 237
HpaII CCGG 2 cut(s) 143, 240
HphI GGTGA 3 cut(s) 406, 840, 1269
Hpy166II GTNNAC 5 cut(s) 110, 237, 577, 616, 1005
Hpy188I TCNGA 3 cut(s) 59, 909, 948
Hpy188III TCNNGA 7 cut(s) 87, 593, 656, 880, 1044, 1091, 1100
Hpy8I GTNNAC 5 cut(s) 110, 237, 577, 616, 1005
Hpy99I CGWCG 3 cut(s) 645, 799, 802
HpyAV CCTTC 3 cut(s) 430, 825, 1131
HpyCH4III ACNGT 1 cut(s) 1185
HpyCH4IV ACGT 4 cut(s) 95, 99, 579, 618
HpyCH4V TGCA 5 cut(s) 453, 541, 936, 1257, 1289
HpyF10VI GCNNNNNNNGC 5 cut(s) 427, 1085, 1094, 1175, 1312
HpyF3I CTNAG 3 cut(s) 56, 131, 1266
HpySE526I ACGT 4 cut(s) 95, 99, 579, 618
Hsp92II CATG 4 cut(s) 613, 883, 955, 1325
HspAI GCGC 3 cut(s) 1084, 1086, 1273
Ksp22I TGATCA 1 cut(s) 1113
KspAI GTTAAC 1 cut(s) 237
KspI CCGCGG 2 cut(s) 422, 486
Kzo9I GATC 6 cut(s) 363, 378, 583, 603, 1102, 1113
LmnI GCTCC 4 cut(s) 556, 927, 1270, 1348
Lsp1109I GCAGC 4 cut(s) 137, 370, 649, 1162
LweI GCATC 2 cut(s) 58, 58
MaeI CTAG 5 cut(s) 122, 572, 1091, 1100, 1401
MaeII ACGT 4 cut(s) 95, 99, 579, 618
MaeIII GTNAC 1 cut(s) 556
MalI GATC 6 cut(s) 365, 380, 585, 605, 1104, 1115
MboI GATC 6 cut(s) 363, 378, 583, 603, 1102, 1113
MboII GAAGA 8 cut(s) 88, 191, 212, 400, 409, 454, 752, 850
MflI RGATCY 2 cut(s) 363, 583
MluCI AATT 1 cut(s) 273
MlyI GAGTC 1 cut(s) 860
MmeI TCCRAC 1 cut(s) 894
MseI TTAA 4 cut(s) 236, 291, 525, 1206
MslI CAYNNNNRTG 1 cut(s) 32
MspA1I CMGCKG 4 cut(s) 268, 421, 485, 563
MspI CCGG 2 cut(s) 143, 240
MspR9I CCNGG 5 cut(s) 105, 191, 241, 925, 1009
Mva1269I GAATGC 2 cut(s) 85, 722
MvaI CCWGG 4 cut(s) 105, 191, 925, 1009
MvnI CGCG 5 cut(s) 421, 485, 695, 802, 1086
MwoI GCNNNNNNNGC 5 cut(s) 427, 1085, 1094, 1175, 1312
NciI CCSGG 1 cut(s) 241
NdeII GATC 6 cut(s) 363, 378, 583, 603, 1102, 1113
NheI GCTAGC 1 cut(s) 1400
NlaIII CATG 4 cut(s) 613, 883, 955, 1325
NlaIV GGNNCC 3 cut(s) 285, 552, 1350
NmeAIII GCCGAG 1 cut(s) 1291
NmuCI GTSAC 1 cut(s) 556
NspI RCATGY 1 cut(s) 1325
NspV TTCGAA 1 cut(s) 668
OliI CACNNNNGTG 1 cut(s) 32
PagI TCATGA 1 cut(s) 879
PaqCI CACCTGC 1 cut(s) 976
PauI GCGCGC 1 cut(s) 1084
PceI AGGCCT 1 cut(s) 1235
PciI ACATGT 1 cut(s) 1321
PcsI WCGNNNNNNNCGW 1 cut(s) 744
PctI GAATGC 2 cut(s) 85, 722
PfeI GAWTC 7 cut(s) 4, 250, 344, 472, 511, 845, 1220
Pfl23II CGTACG 1 cut(s) 96
PflMI CCANNNNNTGG 1 cut(s) 599
PfoI TCCNGGA 1 cut(s) 189
PkrI GCNGC 9 cut(s) 127, 226, 385, 423, 565, 568, 639, 1177, 1317
PleI GAGTC 1 cut(s) 860
PpsI GAGTC 1 cut(s) 860
Ppu21I YACGTR 1 cut(s) 100
PscI ACATGT 1 cut(s) 1321
Psp6I CCWGG 4 cut(s) 103, 189, 923, 1007
PspGI CCWGG 4 cut(s) 103, 189, 923, 1007
PspLI CGTACG 1 cut(s) 96
PspN4I GGNNCC 3 cut(s) 285, 552, 1350
PspPI GGNCC 6 cut(s) 187, 355, 410, 627, 921, 1108
PstNI CAGNNNCTG 2 cut(s) 599, 1111
PsuI RGATCY 2 cut(s) 363, 583
PteI GCGCGC 1 cut(s) 1084
PvuII CAGCTG 1 cut(s) 268
RsaI GTAC 3 cut(s) 98, 118, 1004
RsaNI GTAC 3 cut(s) 97, 117, 1003
RseI CAYNNNNRTG 1 cut(s) 32
SacII CCGCGG 2 cut(s) 422, 486
SaqAI TTAA 4 cut(s) 236, 291, 525, 1206
SatI GCNGC 9 cut(s) 126, 225, 384, 422, 564, 567, 638, 1176, 1316
Sau3AI GATC 6 cut(s) 363, 378, 583, 603, 1102, 1113
Sau96I GGNCC 6 cut(s) 187, 355, 410, 627, 921, 1108
SchI GAGTC 1 cut(s) 860
ScrFI CCNGG 5 cut(s) 105, 191, 241, 925, 1009
SfaNI GCATC 2 cut(s) 58, 58
SfcI CTRYAG 1 cut(s) 1412
Sfr303I CCGCGG 2 cut(s) 422, 486
SfuI TTCGAA 1 cut(s) 668
SgrBI CCGCGG 2 cut(s) 422, 486
SinI GGWCC 3 cut(s) 187, 410, 627
SmiMI CAYNNNNRTG 1 cut(s) 32
SpeI ACTAGT 1 cut(s) 571
Sse9I AATT 1 cut(s) 273
SseBI AGGCCT 1 cut(s) 1235
SspI AATATT 2 cut(s) 449, 943
SspMI CTAG 5 cut(s) 122, 572, 1091, 1100, 1401
StuI AGGCCT 1 cut(s) 1235
StyD4I CCNGG 5 cut(s) 103, 189, 239, 923, 1007
StyI CCWWGG 1 cut(s) 279
TaaI ACNGT 1 cut(s) 1185
TaiI ACGT 4 cut(s) 98, 102, 582, 621
TaqI TCGA 5 cut(s) 11, 45, 302, 668, 747
TaqII GACCGA 1 cut(s) 1357
TasI AATT 1 cut(s) 273
TauI GCSGC 5 cut(s) 227, 424, 566, 569, 1318
TfiI GAWTC 7 cut(s) 4, 250, 344, 472, 511, 845, 1220
Tru1I TTAA 4 cut(s) 236, 291, 525, 1206
Tru9I TTAA 4 cut(s) 236, 291, 525, 1206
TscAI CASTG 3 cut(s) 604, 1252, 1359
TseFI GTSAC 1 cut(s) 556
TseI GCWGC 4 cut(s) 125, 383, 637, 1175
Tsp45I GTSAC 1 cut(s) 556
TspDTI ATGAA 3 cut(s) 213, 868, 896
TspGWI ACGGA 4 cut(s) 243, 658, 857, 1331
TspRI CASTG 3 cut(s) 604, 1252, 1359
Van91I CCANNNNNTGG 1 cut(s) 599
VpaK11BI GGWCC 3 cut(s) 187, 410, 627
XapI RAATTY 1 cut(s) 273
XbaI TCTAGA 2 cut(s) 1090, 1099
XceI RCATGY 1 cut(s) 1325
XcmI CCANNNNNNNNNTGG 1 cut(s) 783
XspI CTAG 5 cut(s) 122, 572, 1091, 1100, 1401
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.