Rmu_sc0001562.1_g000027

Sister chromatid cohesion protein PDS5 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001562.1
OG0000057
Physical Location & Seq
Forward (+)
138656 .. 141073
2418 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001562.1_g000027.1.cds

Sequence Viewer

Length: 1893 bp
atggccttcactaaaccggagttcgcggcatatacctatgatgctaacaaagctcacgagatcctcgacgaaatgattgctgcaaagatggtaaagactgatttcgggccttttccgcgaccagagaagttgaaaggaaagaaatactgcaagttccagaacctgtggaaccacaacactgcggactgcgtaaagctcaaggaccagattcaagtttggcttaataacggcagcttgcaggtagaggctccagtcaccgttgcagcactggttgatgtggaccctttccctgataccggggtcaatatggtcaatgtagactggaacaaaaagctgcaaaagaaaccaacgctggatctggccatgagcaaacagggtcataggtccaccgcagatgaggtgtcagttaaggatagaacagagacaaccaaacaggcctcatccgtaattctgtgctcgcgatgtaaggaggagtgtggtatccaaataccgcacgaggaagtcgaacagacatttcatttcggctccctgccaccagtcaagtgggcctccccatcgcggaactatcagcctgccagcccgagagaatgggagaaagtgacatcaccgtcatcccccaaagactccaatttgttcctgaaattaaaagcaaccgccagcgagccgatacaggaaaaggtcaaaagcggttgtaaagatattttgaccaagccctatataccacctgcatcagctaatcctatcaaagaaggcagatggtacacaagggagaaggggaaggcagtggagattagtccgtccaggaagaggaagctgcagcgcaggttcggcgaagccaagcgcgctctagaggccttggaacagggcctgataaaaccttcccaattggtcaagtcgcccgaaaaataccagaaagagatggaggcgctggccgccaaaccgttgagacctccccgcggtcttgacaaacaaacagattcgctaataggggcttcaaagcccagtgtgttttgcagaattactaaagagatctcaccgccgcctaccagaaggaacagctcgccaactcaacgaccgcatgtcaggtgcaggctctcccatgaaacaccggcggtcaaggcttcagtcttcgacaggctggggggcaaggacagagtggttaacaccttgcaatggcgacccaagaaagtccaaagtgtagtcatttccgccccagaagagcgtaaggaaccggaaaaccctaagccgttagtaggtgagcaagaactcgagtcacaagggcttgaacactgccaggtaaaaggccttatagaagagtcgttagtagatcgcttggctcagcagttccagactgatatcccgttggaaaaacccaagattgatctggctgtcgacgtagaggagactgagtcagatgaggtttcttgcaatatggtttacgtgctccccgcgaaatatgccttgccggtcgctgctcaggattgcgtggagatcgaagaagagggtgcgcaaccattgcaggtcacttcagcagccgcaacacctgtagaagacggggccttaccagaaccagcgggggttccggacaaggggtcactcatgcacttctctaagccaacgccagccatggtccaacacatgcggccgctatacattacggcagacatcggtgaggtggtcccagcagatccccgtccgtttccggtctccgcaaattatgtagatgccagatactatttggaacctatcactccattgcaagttagtggtatcgatgataagggccgccctataggggtgacggcctctgaactggcacagtggggtctcacgctcgcaaaagaaggcttggaacgacccgaccatgctgtgcccaaacctttaactgattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

630

Amino Acids

69.99

Weight (kDa)

7.87

Isoelectric Point (pI)

50.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 733
AasI GACNNNNNNGTC 1 cut(s) 607
Acc16I TGCGCA 1 cut(s) 1509
Acc36I ACCTGC 4 cut(s) 229, 733, 813, 1510
AccI GTMKAC 2 cut(s) 318, 1392
AccII CGCG 7 cut(s) 26, 118, 460, 559, 843, 957, 1451
AccIII TCCGGA 1 cut(s) 1582
AclWI GGATC 3 cut(s) 55, 363, 1682
AcoI YGGCCR 3 cut(s) 360, 930, 1643
AcuI CTGAAG 2 cut(s) 1107, 1512
AfaI GTAC 1 cut(s) 761
AfiI CCNNNNNNNGG 8 cut(s) 296, 558, 807, 956, 1173, 1253, 1589, 1795
AgsI TTSAA 4 cut(s) 133, 212, 996, 1286
AhdI GACNNNNNGTC 2 cut(s) 1079, 1591
AjnI CCWGG 2 cut(s) 800, 1293
AluBI AGCT 7 cut(s) 53, 196, 234, 334, 734, 814, 1059
AluI AGCT 7 cut(s) 53, 196, 234, 334, 734, 814, 1059
Alw21I GWGCWC 2 cut(s) 458, 1446
Alw26I GTCTC 5 cut(s) 416, 940, 1397, 1711, 1832
AlwI GGATC 3 cut(s) 55, 363, 1682
AlwNI CAGNNNCTG 2 cut(s) 163, 868
Ama87I CYCGRG 2 cut(s) 580, 1268
Aor13HI TCCGGA 1 cut(s) 1582
ApeKI GCWGC 8 cut(s) 80, 231, 263, 334, 814, 817, 1472, 1532
AspLEI GCGC 5 cut(s) 822, 843, 845, 928, 1510
AsuC2I CCSGG 1 cut(s) 298
AsuHPI GGTGA 6 cut(s) 247, 597, 1026, 1268, 1682, 1810
AvaI CYCGRG 2 cut(s) 580, 1268
AvaII GGWCC 5 cut(s) 202, 280, 384, 1630, 1678
BaeGI GKGCMC 1 cut(s) 1875
BaeI ACNNNNGTAYC 2 cut(s) 285, 318
BalI TGGCCA 1 cut(s) 362
BauI CACGAG 2 cut(s) 56, 494
BbsI GAAGAC 2 cut(s) 1120, 1557
Bbv12I GWGCWC 2 cut(s) 458, 1446
BbvI GCAGC 8 cut(s) 67, 243, 275, 321, 801, 829, 1459, 1544
BccI CCATC 4 cut(s) 82, 562, 750, 913
BceAI ACGGC 4 cut(s) 244, 1231, 1674, 1818
BcgI CGANNNNNNTGC 2 cut(s) 59, 93
BciT130I CCWGG 2 cut(s) 802, 1295
BciVI GTATCC 1 cut(s) 491
BcnI CCSGG 1 cut(s) 298
BcoDI GTCTC 5 cut(s) 416, 940, 1397, 1711, 1832
BfaI CTAG 1 cut(s) 848
BfmI CTRYAG 3 cut(s) 815, 1545, 1791
BfoI RGCGCY 1 cut(s) 929
BfuAI ACCTGC 4 cut(s) 229, 733, 813, 1510
BfuI GTATCC 1 cut(s) 491
BglII AGATCT 1 cut(s) 1029
BlpI GCTNAGC 1 cut(s) 1338
Bme1390I CCNGG 3 cut(s) 298, 802, 1295
Bme18I GGWCC 5 cut(s) 202, 280, 384, 1630, 1678
BmeRI GACNNNNNGTC 2 cut(s) 1079, 1591
BmeT110I CYCGRG 2 cut(s) 580, 1268
BmiI GGNNCC 9 cut(s) 170, 249, 282, 526, 1230, 1558, 1581, 1680, 1743
BmrFI CCNGG 3 cut(s) 298, 802, 1295
BmrI ACTGGG 1 cut(s) 996
BmsI GCATC 3 cut(s) 31, 737, 1714
BmuI ACTGGG 1 cut(s) 996
BpiI GAAGAC 2 cut(s) 1120, 1557
BpmI CTGGAG 1 cut(s) 234
Bpu10I CCTNAGC 2 cut(s) 1242, 1476
Bpu1102I GCTNAGC 1 cut(s) 1338
BpuEI CTTGAG 1 cut(s) 182
BpuMI CCSGG 1 cut(s) 298
Bsa29I ATCGAT 1 cut(s) 1773
BsaAI YACGTR 1 cut(s) 1441
BsaI GGTCTC 3 cut(s) 940, 1711, 1832
BsaJI CCNNGG 4 cut(s) 297, 855, 955, 1626
BsaWI WCCGGW 4 cut(s) 16, 1231, 1582, 1702
BsaXI ACNNNNNCTCC 2 cut(s) 1394, 1424
Bsc4I CCNNNNNNNGG 8 cut(s) 296, 558, 807, 956, 1173, 1253, 1589, 1795
Bse118I RCCGGY 2 cut(s) 1108, 1465
Bse1I ACTGG 6 cut(s) 251, 273, 326, 536, 1002, 1818
Bse3DI GCAATG 3 cut(s) 1178, 1514, 1754
BseAI TCCGGA 1 cut(s) 1582
BseBI CCWGG 2 cut(s) 802, 1295
BseCI ATCGAT 1 cut(s) 1773
BseDI CCNNGG 4 cut(s) 297, 855, 955, 1626
BseGI GGATG 2 cut(s) 440, 611
BseLI CCNNNNNNNGG 8 cut(s) 296, 558, 807, 956, 1173, 1253, 1589, 1795
BseMI GCAATG 3 cut(s) 1178, 1514, 1754
BseMII CTCAG 3 cut(s) 1352, 1398, 1490
BseNI ACTGG 6 cut(s) 251, 273, 326, 536, 1002, 1818
BsePI GCGCGC 1 cut(s) 841
BseRI GAGGAG 2 cut(s) 485, 1415
BseSI GKGCMC 1 cut(s) 1875
BseX3I CGGCCG 1 cut(s) 1643
BseXI GCAGC 8 cut(s) 67, 243, 275, 321, 801, 829, 1459, 1544
BseYI CCCAGC 2 cut(s) 1138, 1681
BsgI GTGCAG 1 cut(s) 1108
Bsh1236I CGCG 7 cut(s) 26, 118, 460, 559, 843, 957, 1451
Bsh1285I CGRYCG 3 cut(s) 1076, 1470, 1646
BshVI ATCGAT 1 cut(s) 1773
BsiEI CGRYCG 3 cut(s) 1076, 1470, 1646
BsiHKAI GWGCWC 2 cut(s) 458, 1446
BsiHKCI CYCGRG 2 cut(s) 580, 1268
BsiSI CCGG 7 cut(s) 17, 297, 1109, 1232, 1466, 1583, 1703
BslFI GGGAC 1 cut(s) 1664
BslI CCNNNNNNNGG 8 cut(s) 296, 558, 807, 956, 1173, 1253, 1589, 1795
BsmAI GTCTC 5 cut(s) 416, 940, 1397, 1711, 1832
BsmFI GGGAC 1 cut(s) 1664
Bso31I GGTCTC 3 cut(s) 940, 1711, 1832
BsoBI CYCGRG 2 cut(s) 580, 1268
Bsp1286I GDGCHC 3 cut(s) 458, 1446, 1875
Bsp13I TCCGGA 1 cut(s) 1582
Bsp143I GATC 7 cut(s) 60, 355, 1029, 1327, 1381, 1491, 1687
Bsp1720I GCTNAGC 1 cut(s) 1338
Bsp19I CCATGG 1 cut(s) 1626
Bsp68I TCGCGA 1 cut(s) 460
BspCNI CTCAG 3 cut(s) 1351, 1399, 1489
BspDI ATCGAT 1 cut(s) 1773
BspEI TCCGGA 1 cut(s) 1582
BspFNI CGCG 7 cut(s) 26, 118, 460, 559, 843, 957, 1451
BspLI GGNNCC 9 cut(s) 170, 249, 282, 526, 1230, 1558, 1581, 1680, 1743
BspMAI CTGCAG 1 cut(s) 819
BspMI ACCTGC 4 cut(s) 229, 733, 813, 1510
BspPI GGATC 3 cut(s) 55, 363, 1682
BspQI GCTCTTC 1 cut(s) 1212
BspTNI GGTCTC 3 cut(s) 940, 1711, 1832
BsrDI GCAATG 3 cut(s) 1178, 1514, 1754
BsrFI RCCGGY 2 cut(s) 1108, 1465
BsrI ACTGG 6 cut(s) 251, 273, 326, 536, 1002, 1818
BssAI RCCGGY 2 cut(s) 1108, 1465
BssECI CCNNGG 4 cut(s) 297, 855, 955, 1626
BssHII GCGCGC 1 cut(s) 841
BssMI GATC 7 cut(s) 60, 355, 1029, 1327, 1381, 1491, 1687
BssSI CACGAG 2 cut(s) 56, 494
BssT1I CCWWGG 2 cut(s) 855, 1626
Bst2BI CACGAG 2 cut(s) 56, 494
Bst2UI CCWGG 2 cut(s) 802, 1295
Bst4CI ACNGT 4 cut(s) 259, 609, 942, 1821
Bst6I CTCTTC 4 cut(s) 800, 1212, 1308, 1494
BstAPI GCANNNNNTGC 1 cut(s) 1516
BstBAI YACGTR 1 cut(s) 1441
BstDEI CTNAG 5 cut(s) 1242, 1338, 1407, 1476, 1611
BstDSI CCRYGG 2 cut(s) 955, 1626
BstF5I GGATG 2 cut(s) 440, 611
BstFNI CGCG 7 cut(s) 26, 118, 460, 559, 843, 957, 1451
BstH2I RGCGCY 1 cut(s) 929
BstHHI GCGC 5 cut(s) 822, 843, 845, 928, 1510
BstKTI GATC 7 cut(s) 63, 358, 1032, 1330, 1384, 1494, 1690
BstMAI GTCTC 5 cut(s) 416, 940, 1397, 1711, 1832
BstMBI GATC 7 cut(s) 60, 355, 1029, 1327, 1381, 1491, 1687
BstMCI CGRYCG 3 cut(s) 1076, 1470, 1646
BstMWI GCNNNNNNNGC 9 cut(s) 50, 115, 828, 842, 851, 932, 1118, 1457, 1516
BstNI CCWGG 2 cut(s) 802, 1295
BstNSI RCATGY 2 cut(s) 1082, 1642
BstSCI CCNGG 3 cut(s) 296, 800, 1293
BstSFI CTRYAG 3 cut(s) 815, 1545, 1791
BstSLI GKGCMC 1 cut(s) 1875
BstUI CGCG 7 cut(s) 26, 118, 460, 559, 843, 957, 1451
BstV1I GCAGC 8 cut(s) 67, 243, 275, 321, 801, 829, 1459, 1544
BstV2I GAAGAC 2 cut(s) 1120, 1557
BstX2I RGATCY 4 cut(s) 60, 355, 1029, 1687
BstXI CCANNNNNNTGG 1 cut(s) 543
BstYI RGATCY 4 cut(s) 60, 355, 1029, 1687
BstZI CGGCCG 1 cut(s) 1643
Bsu15I ATCGAT 1 cut(s) 1773
BsuI GTATCC 1 cut(s) 491
BsuTUI ATCGAT 1 cut(s) 1773
BtgI CCRYGG 2 cut(s) 955, 1626
BtgZI GCGATG 2 cut(s) 475, 540
BtsCI GGATG 2 cut(s) 440, 611
BtsI GCAGTG 3 cut(s) 177, 789, 1288
BtsIMutI CAGTG 6 cut(s) 177, 266, 789, 1009, 1288, 1826
BtuMI TCGCGA 1 cut(s) 460
BveI ACCTGC 4 cut(s) 229, 733, 813, 1510
CaiI CAGNNNCTG 2 cut(s) 163, 868
CciNI GCGGCCGC 1 cut(s) 1643
CfoI GCGC 5 cut(s) 822, 843, 845, 928, 1510
Cfr10I RCCGGY 2 cut(s) 1108, 1465
Cfr42I CCGCGG 1 cut(s) 958
ClaI ATCGAT 1 cut(s) 1773
Csp6I GTAC 1 cut(s) 760
CviAII CATG 7 cut(s) 364, 1079, 1100, 1600, 1627, 1639, 1865
CviQI GTAC 1 cut(s) 760
DdeI CTNAG 5 cut(s) 1242, 1338, 1407, 1476, 1611
DpnI GATC 7 cut(s) 62, 357, 1031, 1329, 1383, 1493, 1689
DpnII GATC 7 cut(s) 60, 355, 1029, 1327, 1381, 1491, 1687
DrdI GACNNNNNNGTC 1 cut(s) 607
DriI GACNNNNNGTC 2 cut(s) 1079, 1591
DseDI GACNNNNNNGTC 1 cut(s) 607
EaeI YGGCCR 3 cut(s) 360, 930, 1643
EagI CGGCCG 1 cut(s) 1643
Eam1104I CTCTTC 4 cut(s) 800, 1212, 1308, 1494
Eam1105I GACNNNNNGTC 2 cut(s) 1079, 1591
EarI CTCTTC 4 cut(s) 800, 1212, 1308, 1494
EciI GGCGGA 1 cut(s) 1198
EclXI CGGCCG 1 cut(s) 1643
Eco130I CCWWGG 2 cut(s) 855, 1626
Eco147I AGGCCT 3 cut(s) 437, 854, 1305
Eco31I GGTCTC 3 cut(s) 940, 1711, 1832
Eco32I GATATC 1 cut(s) 1357
Eco47I GGWCC 5 cut(s) 202, 280, 384, 1630, 1678
Eco52I CGGCCG 1 cut(s) 1643
Eco57I CTGAAG 2 cut(s) 1107, 1512
Eco88I CYCGRG 2 cut(s) 580, 1268
EcoO109I RGGNCCY 2 cut(s) 865, 1557
EcoRII CCWGG 2 cut(s) 800, 1293
EcoRV GATATC 1 cut(s) 1357
EcoT14I CCWWGG 2 cut(s) 855, 1626
ErhI CCWWGG 2 cut(s) 855, 1626
FaeI CATG 7 cut(s) 367, 1082, 1103, 1603, 1630, 1642, 1868
FalI AAGNNNNNCTT 2 cut(s) 204, 236
FaqI GGGAC 1 cut(s) 1664
FatI CATG 7 cut(s) 363, 1078, 1099, 1599, 1626, 1638, 1864
FauI CCCGC 3 cut(s) 962, 1456, 1567
FblI GTMKAC 2 cut(s) 318, 1392
FokI GGATG 2 cut(s) 427, 598
FspBI CTAG 1 cut(s) 848
FspI TGCGCA 1 cut(s) 1509
GlaI GCGC 5 cut(s) 821, 842, 844, 927, 1509
GsaI CCCAGC 2 cut(s) 1142, 1685
GsuI CTGGAG 1 cut(s) 234
HaeII RGCGCY 1 cut(s) 929
HapII CCGG 7 cut(s) 17, 297, 1109, 1232, 1466, 1583, 1703
HhaI GCGC 5 cut(s) 822, 843, 845, 928, 1510
Hin1II CATG 7 cut(s) 367, 1082, 1103, 1603, 1630, 1642, 1868
Hin6I GCGC 5 cut(s) 820, 841, 843, 926, 1508
HinP1I GCGC 5 cut(s) 820, 841, 843, 926, 1508
HincII GTYRAC 2 cut(s) 1162, 1393
HindII GTYRAC 2 cut(s) 1162, 1393
HinfI GANTC 6 cut(s) 208, 623, 977, 1271, 1316, 1409
HpaI GTTAAC 1 cut(s) 1162
HpaII CCGG 7 cut(s) 17, 297, 1109, 1232, 1466, 1583, 1703
HphI GGTGA 6 cut(s) 247, 597, 1026, 1268, 1682, 1810
Hpy166II GTNNAC 7 cut(s) 280, 319, 387, 762, 1162, 1393, 1438
Hpy188I TCNGA 2 cut(s) 1414, 1810
Hpy188III TCNNGA 9 cut(s) 56, 157, 459, 637, 848, 962, 1348, 1478, 1583
Hpy8I GTNNAC 7 cut(s) 280, 319, 387, 762, 1162, 1393, 1438
Hpy99I CGWCG 2 cut(s) 71, 1397
HpyAV CCTTC 7 cut(s) 16, 743, 766, 772, 888, 1044, 1838
HpyCH4III ACNGT 4 cut(s) 259, 609, 942, 1821
HpyCH4IV ACGT 2 cut(s) 1395, 1440
HpyF10VI GCNNNNNNNGC 9 cut(s) 50, 115, 828, 842, 851, 932, 1118, 1457, 1516
HpyF3I CTNAG 5 cut(s) 1242, 1338, 1407, 1476, 1611
HpySE526I ACGT 2 cut(s) 1395, 1440
Hsp92II CATG 7 cut(s) 367, 1082, 1103, 1603, 1630, 1642, 1868
HspAI GCGC 5 cut(s) 820, 841, 843, 926, 1508
Kpn2I TCCGGA 1 cut(s) 1582
KspAI GTTAAC 1 cut(s) 1162
KspI CCGCGG 1 cut(s) 958
Kzo9I GATC 7 cut(s) 60, 355, 1029, 1327, 1381, 1491, 1687
LguI GCTCTTC 1 cut(s) 1212
LmnI GCTCC 3 cut(s) 253, 530, 1449
Lsp1109I GCAGC 8 cut(s) 67, 243, 275, 321, 801, 829, 1459, 1544
LweI GCATC 3 cut(s) 31, 737, 1714
MaeI CTAG 1 cut(s) 848
MaeII ACGT 2 cut(s) 1395, 1440
MaeIII GTNAC 6 cut(s) 253, 598, 1272, 1522, 1593, 1798
MalI GATC 7 cut(s) 62, 357, 1031, 1329, 1383, 1493, 1689
MboI GATC 7 cut(s) 60, 355, 1029, 1327, 1381, 1491, 1687
MboII GAAGA 7 cut(s) 817, 1120, 1229, 1325, 1508, 1511, 1562
MfeI CAATTG 1 cut(s) 884
MflI RGATCY 4 cut(s) 60, 355, 1029, 1687
MhlI GDGCHC 3 cut(s) 458, 1446, 1875
MlsI TGGCCA 1 cut(s) 362
MluCI AATT 6 cut(s) 447, 628, 641, 884, 1017, 1714
MluNI TGGCCA 1 cut(s) 362
MlyI GAGTC 4 cut(s) 617, 1280, 1325, 1418
MmeI TCCRAC 2 cut(s) 1344, 1657
Mox20I TGGCCA 1 cut(s) 362
MroI TCCGGA 1 cut(s) 1582
MscI TGGCCA 1 cut(s) 362
MseI TTAA 6 cut(s) 222, 408, 644, 1161, 1883, 1891
Msp20I TGGCCA 1 cut(s) 362
MspA1I CMGCKG 2 cut(s) 957, 1574
MspI CCGG 7 cut(s) 17, 297, 1109, 1232, 1466, 1583, 1703
MspR9I CCNGG 3 cut(s) 298, 802, 1295
MunI CAATTG 1 cut(s) 884
MvaI CCWGG 2 cut(s) 802, 1295
MvnI CGCG 7 cut(s) 26, 118, 460, 559, 843, 957, 1451
MwoI GCNNNNNNNGC 9 cut(s) 50, 115, 828, 842, 851, 932, 1118, 1457, 1516
NciI CCSGG 1 cut(s) 298
NcoI CCATGG 1 cut(s) 1626
NdeII GATC 7 cut(s) 60, 355, 1029, 1327, 1381, 1491, 1687
NlaIII CATG 7 cut(s) 367, 1082, 1103, 1603, 1630, 1642, 1868
NlaIV GGNNCC 9 cut(s) 170, 249, 282, 526, 1230, 1558, 1581, 1680, 1743
NmuCI GTSAC 6 cut(s) 253, 598, 1272, 1522, 1593, 1798
NotI GCGGCCGC 1 cut(s) 1643
NruI TCGCGA 1 cut(s) 460
NsbI TGCGCA 1 cut(s) 1509
NspI RCATGY 2 cut(s) 1082, 1642
PaeR7I CTCGAG 1 cut(s) 1268
PaqCI CACCTGC 1 cut(s) 733
PauI GCGCGC 1 cut(s) 841
PceI AGGCCT 3 cut(s) 437, 854, 1305
PciSI GCTCTTC 1 cut(s) 1212
PcsI WCGNNNNNNNCGW 2 cut(s) 63, 501
PfeI GAWTC 2 cut(s) 208, 977
PflFI GACNNNGTC 1 cut(s) 1408
PfoI TCCNGGA 1 cut(s) 800
PleI GAGTC 4 cut(s) 617, 1279, 1324, 1417
PpsI GAGTC 4 cut(s) 617, 1279, 1324, 1417
Ppu21I YACGTR 1 cut(s) 1441
Psp6I CCWGG 2 cut(s) 800, 1293
PspFI CCCAGC 2 cut(s) 1138, 1681
PspGI CCWGG 2 cut(s) 800, 1293
PspN4I GGNNCC 9 cut(s) 170, 249, 282, 526, 1230, 1558, 1581, 1680, 1743
PspXI VCTCGAGB 1 cut(s) 1268
PstI CTGCAG 1 cut(s) 819
PstNI CAGNNNCTG 2 cut(s) 163, 868
PsuI RGATCY 4 cut(s) 60, 355, 1029, 1687
PsyI GACNNNGTC 1 cut(s) 1408
PteI GCGCGC 1 cut(s) 841
RruI TCGCGA 1 cut(s) 460
RsaI GTAC 1 cut(s) 761
RsaNI GTAC 1 cut(s) 760
SacII CCGCGG 1 cut(s) 958
SalI GTCGAC 1 cut(s) 1391
SapI GCTCTTC 1 cut(s) 1212
SaqAI TTAA 6 cut(s) 222, 408, 644, 1161, 1883, 1891
Sau3AI GATC 7 cut(s) 60, 355, 1029, 1327, 1381, 1491, 1687
SchI GAGTC 4 cut(s) 617, 1280, 1325, 1418
ScrFI CCNGG 3 cut(s) 298, 802, 1295
SduI GDGCHC 3 cut(s) 458, 1446, 1875
SfaNI GCATC 3 cut(s) 31, 737, 1714
SfcI CTRYAG 3 cut(s) 815, 1545, 1791
Sfr274I CTCGAG 1 cut(s) 1268
Sfr303I CCGCGG 1 cut(s) 958
SgrAI CRCCGGYG 1 cut(s) 1108
SgrBI CCGCGG 1 cut(s) 958
SinI GGWCC 5 cut(s) 202, 280, 384, 1630, 1678
SlaI CTCGAG 1 cut(s) 1268
SmlI CTYRAG 2 cut(s) 197, 1268
SmoI CTYRAG 2 cut(s) 197, 1268
Sse9I AATT 6 cut(s) 447, 628, 641, 884, 1017, 1714
SseBI AGGCCT 3 cut(s) 437, 854, 1305
SspMI CTAG 1 cut(s) 848
StuI AGGCCT 3 cut(s) 437, 854, 1305
StyD4I CCNGG 3 cut(s) 296, 800, 1293
StyI CCWWGG 2 cut(s) 855, 1626
TaaI ACNGT 4 cut(s) 259, 609, 942, 1821
TaiI ACGT 2 cut(s) 1398, 1443
TaqI TCGA 7 cut(s) 66, 504, 1131, 1269, 1392, 1494, 1773
TasI AATT 6 cut(s) 447, 628, 641, 884, 1017, 1714
TauI GCSGC 7 cut(s) 29, 935, 1042, 1538, 1645, 1648, 1788
TfiI GAWTC 2 cut(s) 208, 977
Tru1I TTAA 6 cut(s) 222, 408, 644, 1161, 1883, 1891
Tru9I TTAA 6 cut(s) 222, 408, 644, 1161, 1883, 1891
TscAI CASTG 6 cut(s) 184, 273, 789, 1009, 1295, 1826
TseFI GTSAC 6 cut(s) 253, 598, 1272, 1522, 1593, 1798
TseI GCWGC 8 cut(s) 80, 231, 263, 334, 814, 817, 1472, 1532
Tsp45I GTSAC 6 cut(s) 253, 598, 1272, 1522, 1593, 1798
TspDTI ATGAA 2 cut(s) 506, 1116
TspGWI ACGGA 3 cut(s) 433, 786, 1686
TspRI CASTG 6 cut(s) 184, 273, 789, 1009, 1295, 1826
Tth111I GACNNNGTC 1 cut(s) 1408
VpaK11BI GGWCC 5 cut(s) 202, 280, 384, 1630, 1678
XbaI TCTAGA 1 cut(s) 847
XceI RCATGY 2 cut(s) 1082, 1642
XcmI CCANNNNNNNNNTGG 3 cut(s) 540, 1381, 1735
XhoI CTCGAG 1 cut(s) 1268
XmiI GTMKAC 2 cut(s) 318, 1392
XspI CTAG 1 cut(s) 848
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.