Retrotransposon gag protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 55 |
| AciI | CCGC | 1 cut(s) | 53 |
| AclWI | GGATC | 2 cut(s) | 79, 230 |
| AcoI | YGGCCR | 1 cut(s) | 225 |
| AcsI | RAATTY | 1 cut(s) | 160 |
| AcuI | CTGAAG | 1 cut(s) | 132 |
| AfaI | GTAC | 1 cut(s) | 199 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 202 |
| AgsI | TTSAA | 1 cut(s) | 340 |
| AleI | CACNNNNGTG | 1 cut(s) | 252 |
| AluBI | AGCT | 1 cut(s) | 123 |
| AluI | AGCT | 1 cut(s) | 123 |
| Alw26I | GTCTC | 2 cut(s) | 93, 304 |
| AlwI | GGATC | 2 cut(s) | 79, 230 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 206 |
| AoxI | GGCC | 2 cut(s) | 225, 333 |
| ApeKI | GCWGC | 3 cut(s) | 70, 78, 206 |
| ApoI | RAATTY | 1 cut(s) | 160 |
| AsuHPI | GGTGA | 1 cut(s) | 266 |
| BbvI | GCAGC | 3 cut(s) | 82, 90, 193 |
| BccI | CCATC | 1 cut(s) | 236 |
| BcoDI | GTCTC | 2 cut(s) | 93, 304 |
| BfmI | CTRYAG | 1 cut(s) | 207 |
| BisI | GCNGC | 3 cut(s) | 71, 79, 207 |
| BlsI | GCNGC | 3 cut(s) | 72, 80, 208 |
| BmsI | GCATC | 2 cut(s) | 139, 139 |
| BsaI | GGTCTC | 2 cut(s) | 93, 304 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 202 |
| Bse1I | ACTGG | 2 cut(s) | 88, 220 |
| BseGI | GGATG | 1 cut(s) | 164 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 202 |
| BseMII | CTCAG | 1 cut(s) | 151 |
| BseNI | ACTGG | 2 cut(s) | 88, 220 |
| BseRI | GAGGAG | 2 cut(s) | 125, 302 |
| BseXI | GCAGC | 3 cut(s) | 82, 90, 193 |
| Bsh1236I | CGCG | 1 cut(s) | 55 |
| BshFI | GGCC | 2 cut(s) | 227, 335 |
| BslFI | GGGAC | 1 cut(s) | 187 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 202 |
| BsmAI | GTCTC | 2 cut(s) | 93, 304 |
| BsmFI | GGGAC | 1 cut(s) | 187 |
| BsnI | GGCC | 2 cut(s) | 227, 335 |
| Bso31I | GGTCTC | 2 cut(s) | 93, 304 |
| Bsp143I | GATC | 2 cut(s) | 84, 235 |
| BspACI | CCGC | 1 cut(s) | 53 |
| BspANI | GGCC | 2 cut(s) | 227, 335 |
| BspCNI | CTCAG | 1 cut(s) | 150 |
| BspFNI | CGCG | 1 cut(s) | 55 |
| BspMAI | CTGCAG | 1 cut(s) | 211 |
| BspPI | GGATC | 2 cut(s) | 79, 230 |
| BspTNI | GGTCTC | 2 cut(s) | 93, 304 |
| BsrI | ACTGG | 2 cut(s) | 88, 220 |
| BssMI | GATC | 2 cut(s) | 84, 235 |
| Bst4CI | ACNGT | 2 cut(s) | 197, 202 |
| Bst6I | CTCTTC | 1 cut(s) | 279 |
| BstDEI | CTNAG | 2 cut(s) | 46, 137 |
| BstF5I | GGATG | 1 cut(s) | 164 |
| BstFNI | CGCG | 1 cut(s) | 55 |
| BstKTI | GATC | 2 cut(s) | 87, 238 |
| BstMAI | GTCTC | 2 cut(s) | 93, 304 |
| BstMBI | GATC | 2 cut(s) | 84, 235 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 67 |
| BstSFI | CTRYAG | 1 cut(s) | 207 |
| BstUI | CGCG | 1 cut(s) | 55 |
| BstV1I | GCAGC | 3 cut(s) | 82, 90, 193 |
| BsuRI | GGCC | 2 cut(s) | 227, 335 |
| BtsCI | GGATG | 1 cut(s) | 164 |
| BtsI | GCAGTG | 1 cut(s) | 216 |
| BtsIMutI | CAGTG | 3 cut(s) | 108, 207, 216 |
| CaiI | CAGNNNCTG | 1 cut(s) | 206 |
| CseI | GACGC | 1 cut(s) | 44 |
| Csp6I | GTAC | 1 cut(s) | 198 |
| CviAII | CATG | 3 cut(s) | 74, 82, 269 |
| CviJI | RGCY | 6 cut(s) | 5, 45, 123, 206, 227, 335 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 45, 123, 206, 227, 335 |
| CviQI | GTAC | 1 cut(s) | 198 |
| DdeI | CTNAG | 2 cut(s) | 46, 137 |
| DpnI | GATC | 2 cut(s) | 86, 237 |
| DpnII | GATC | 2 cut(s) | 84, 235 |
| EaeI | YGGCCR | 1 cut(s) | 225 |
| Eam1104I | CTCTTC | 1 cut(s) | 279 |
| EarI | CTCTTC | 1 cut(s) | 279 |
| Eco31I | GGTCTC | 2 cut(s) | 93, 304 |
| Eco57I | CTGAAG | 1 cut(s) | 132 |
| EcoRI | GAATTC | 1 cut(s) | 160 |
| FaeI | CATG | 3 cut(s) | 77, 85, 272 |
| FaiI | YATR | 6 cut(s) | 75, 83, 178, 180, 234, 270 |
| FaqI | GGGAC | 1 cut(s) | 187 |
| FatI | CATG | 3 cut(s) | 73, 81, 268 |
| Fnu4HI | GCNGC | 3 cut(s) | 71, 79, 207 |
| FokI | GGATG | 1 cut(s) | 151 |
| Fsp4HI | GCNGC | 3 cut(s) | 71, 79, 207 |
| GluI | GCNGC | 3 cut(s) | 71, 79, 207 |
| HaeIII | GGCC | 2 cut(s) | 227, 335 |
| HgaI | GACGC | 1 cut(s) | 44 |
| Hin1II | CATG | 3 cut(s) | 77, 85, 272 |
| HincII | GTYRAC | 1 cut(s) | 315 |
| HindII | GTYRAC | 1 cut(s) | 315 |
| HindIII | AAGCTT | 1 cut(s) | 121 |
| HphI | GGTGA | 1 cut(s) | 266 |
| Hpy166II | GTNNAC | 2 cut(s) | 214, 315 |
| Hpy188I | TCNGA | 1 cut(s) | 140 |
| Hpy8I | GTNNAC | 2 cut(s) | 214, 315 |
| HpyCH4III | ACNGT | 2 cut(s) | 197, 202 |
| HpyCH4V | TGCA | 2 cut(s) | 209, 305 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 67 |
| HpyF3I | CTNAG | 2 cut(s) | 46, 137 |
| Hsp92II | CATG | 3 cut(s) | 77, 85, 272 |
| Kzo9I | GATC | 2 cut(s) | 84, 235 |
| LpnPI | CCDG | 4 cut(s) | 24, 101, 233, 303 |
| Lsp1109I | GCAGC | 3 cut(s) | 82, 90, 193 |
| LweI | GCATC | 2 cut(s) | 139, 139 |
| MalI | GATC | 2 cut(s) | 86, 237 |
| MboI | GATC | 2 cut(s) | 84, 235 |
| MboII | GAAGA | 6 cut(s) | 169, 269, 287, 290, 296, 333 |
| MluCI | AATT | 2 cut(s) | 29, 160 |
| MnlI | CCTC | 4 cut(s) | 146, 245, 280, 289 |
| MslI | CAYNNNNRTG | 1 cut(s) | 252 |
| MvnI | CGCG | 1 cut(s) | 55 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 67 |
| NdeII | GATC | 2 cut(s) | 84, 235 |
| NlaIII | CATG | 3 cut(s) | 77, 85, 272 |
| NmeAIII | GCCGAG | 1 cut(s) | 311 |
| OliI | CACNNNNGTG | 1 cut(s) | 252 |
| PkrI | GCNGC | 3 cut(s) | 72, 80, 208 |
| PstI | CTGCAG | 1 cut(s) | 211 |
| PstNI | CAGNNNCTG | 1 cut(s) | 206 |
| RsaI | GTAC | 1 cut(s) | 199 |
| RsaNI | GTAC | 1 cut(s) | 198 |
| RseI | CAYNNNNRTG | 1 cut(s) | 252 |
| SatI | GCNGC | 3 cut(s) | 71, 79, 207 |
| Sau3AI | GATC | 2 cut(s) | 84, 235 |
| SetI | ASST | 4 cut(s) | 105, 125, 256, 300 |
| SfaNI | GCATC | 2 cut(s) | 139, 139 |
| SfcI | CTRYAG | 1 cut(s) | 207 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 252 |
| Sse9I | AATT | 2 cut(s) | 29, 160 |
| SsiI | CCGC | 1 cut(s) | 53 |
| TaaI | ACNGT | 2 cut(s) | 197, 202 |
| TasI | AATT | 2 cut(s) | 29, 160 |
| TscAI | CASTG | 3 cut(s) | 115, 207, 216 |
| TseI | GCWGC | 3 cut(s) | 70, 78, 206 |
| TspDTI | ATGAA | 3 cut(s) | 153, 288, 297 |
| TspRI | CASTG | 3 cut(s) | 115, 207, 216 |
| XapI | RAATTY | 1 cut(s) | 160 |