Rroxscaffold_1G00021140

Sister chromatid cohesion protein PDS5 homolog

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
25903101 .. 25903696
596 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00021140.1

Sequence Viewer

Length: 543 bp
ATGGTTTGCCGTAAAGAGAATTGGTTAAGTTGGCAATCAAGGGCTTGGAGCCGCACTGCAAAAGAAGCGCATGGTAGCATGATACGGTCAATGGGCGAGCTCATTACCGAGGTAGGTAGCTTCGAGCGTCTCCTCGCAGAAACGGATGCTTGGAAGCATGCGTCCAAAGGAACTTATGTGCACGGCAAATACCGCGAAGAGGTTTTCCGGGATGACGACGAGGAAGAGGAGAATGATGTTTCCGCTTTTGTGTTGACGGGAAGAAAGAACCCCGCCTTGAAACAGTTGAAAATAACCAAGGAACCGGTCAAGCTCAAGTCCGTAGCCTTGACCAAACCCGAGTTCGTGACGTATACCTATGACGCCAAGAAAGCGCATGAGATATTAGATGAAATGATAGCTGCGAAGATGGTAAAGACCGACTTTGGACCCTTTCCTCTCTCGGATCAGCTAAAAGGAAAAAAGTATTGCAAATTCCATAATATGTGGAACCACAACACGGCCGATCGTGTTAAGTCAAGGACCGTATTCGGTATGGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

180

Amino Acids

20.78

Weight (kDa)

9.1

Isoelectric Point (pI)

29.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 353
AccII CGCG 1 cut(s) 195
AciI CCGC 4 cut(s) 52, 193, 243, 273
AclWI GGATC 1 cut(s) 453
AcoI YGGCCR 1 cut(s) 501
AcsI RAATTY 1 cut(s) 473
AcyI GRCGYC 1 cut(s) 363
AfiI CCNNNNNNNGG 2 cut(s) 199, 499
AgeI ACCGGT 1 cut(s) 304
AgsI TTSAA 2 cut(s) 280, 289
AjuI GAANNNNNNNTTGG 2 cut(s) 326, 358
AluBI AGCT 5 cut(s) 100, 120, 313, 401, 451
AluI AGCT 5 cut(s) 100, 120, 313, 401, 451
Alw21I GWGCWC 2 cut(s) 102, 183
Alw26I GTCTC 1 cut(s) 134
Alw44I GTGCAC 1 cut(s) 179
AlwI GGATC 1 cut(s) 453
Ama87I CYCGRG 1 cut(s) 338
AoxI GGCC 1 cut(s) 501
ApaLI GTGCAC 1 cut(s) 179
ApeKI GCWGC 1 cut(s) 401
ApoI RAATTY 1 cut(s) 473
AsiGI ACCGGT 1 cut(s) 304
AspLEI GCGC 2 cut(s) 70, 376
AspS9I GGNCC 2 cut(s) 428, 522
AsuC2I CCSGG 1 cut(s) 209
AvaI CYCGRG 1 cut(s) 338
AvaII GGWCC 2 cut(s) 428, 522
BaeGI GKGCMC 1 cut(s) 183
BanII GRGCYC 1 cut(s) 102
Bbv12I GWGCWC 2 cut(s) 102, 183
BbvI GCAGC 1 cut(s) 388
BccI CCATC 1 cut(s) 403
BceAI ACGGC 2 cut(s) 199, 516
BcnI CCSGG 1 cut(s) 209
BcoDI GTCTC 1 cut(s) 134
BisI GCNGC 2 cut(s) 52, 402
BlsI GCNGC 2 cut(s) 53, 403
Bme1390I CCNGG 1 cut(s) 209
Bme18I GGWCC 2 cut(s) 428, 522
BmeT110I CYCGRG 1 cut(s) 338
BmgT120I GGNCC 2 cut(s) 428, 522
BmiI GGNNCC 4 cut(s) 50, 303, 430, 491
BmrFI CCNGG 1 cut(s) 209
BmsI GCATC 1 cut(s) 136
BpuEI CTTGAG 1 cut(s) 299
BpuMI CCSGG 1 cut(s) 209
BsaHI GRCGYC 1 cut(s) 363
BsaJI CCNNGG 2 cut(s) 108, 297
BsaWI WCCGGW 1 cut(s) 304
Bsc4I CCNNNNNNNGG 2 cut(s) 199, 499
Bse118I RCCGGY 1 cut(s) 304
BseDI CCNNGG 2 cut(s) 108, 297
BseGI GGATG 2 cut(s) 151, 217
BseLI CCNNNNNNNGG 2 cut(s) 199, 499
BseRI GAGGAG 2 cut(s) 122, 242
BseSI GKGCMC 1 cut(s) 183
BseX3I CGGCCG 1 cut(s) 501
BseXI GCAGC 1 cut(s) 388
Bsh1236I CGCG 1 cut(s) 195
Bsh1285I CGRYCG 2 cut(s) 504, 508
BshFI GGCC 1 cut(s) 503
BshTI ACCGGT 1 cut(s) 304
BsiEI CGRYCG 2 cut(s) 504, 508
BsiHKAI GWGCWC 2 cut(s) 102, 183
BsiHKCI CYCGRG 1 cut(s) 338
BsiSI CCGG 2 cut(s) 208, 305
BslI CCNNNNNNNGG 2 cut(s) 199, 499
BsmAI GTCTC 1 cut(s) 134
BsmBI CGTCTC 1 cut(s) 134
BsnI GGCC 1 cut(s) 503
BsoBI CYCGRG 1 cut(s) 338
Bsp1286I GDGCHC 2 cut(s) 102, 183
Bsp143I GATC 2 cut(s) 445, 505
BspACI CCGC 4 cut(s) 52, 193, 243, 273
BspANI GGCC 1 cut(s) 503
BspFNI CGCG 1 cut(s) 195
BspLI GGNNCC 4 cut(s) 50, 303, 430, 491
BspPI GGATC 1 cut(s) 453
BsrFI RCCGGY 1 cut(s) 304
BssAI RCCGGY 1 cut(s) 304
BssECI CCNNGG 2 cut(s) 108, 297
BssMI GATC 2 cut(s) 445, 505
BssNAI GTATAC 1 cut(s) 354
BssNI GRCGYC 1 cut(s) 363
BssT1I CCWWGG 1 cut(s) 297
Bst1107I GTATAC 1 cut(s) 354
Bst4CI ACNGT 3 cut(s) 87, 285, 526
Bst6I CTCTTC 2 cut(s) 192, 219
BstACI GRCGYC 1 cut(s) 363
BstC8I GCNNGC 2 cut(s) 98, 159
BstF5I GGATG 2 cut(s) 151, 217
BstFNI CGCG 1 cut(s) 195
BstHHI GCGC 2 cut(s) 70, 376
BstKTI GATC 2 cut(s) 448, 508
BstMAI GTCTC 1 cut(s) 134
BstMBI GATC 2 cut(s) 445, 505
BstMCI CGRYCG 2 cut(s) 504, 508
BstMWI GCNNNNNNNGC 3 cut(s) 65, 192, 371
BstNSI RCATGY 1 cut(s) 161
BstSCI CCNGG 1 cut(s) 207
BstSLI GKGCMC 1 cut(s) 183
BstUI CGCG 1 cut(s) 195
BstV1I GCAGC 1 cut(s) 388
BstZ17I GTATAC 1 cut(s) 354
BstZI CGGCCG 1 cut(s) 501
BsuRI GGCC 1 cut(s) 503
BtsCI GGATG 2 cut(s) 151, 217
BtsI GCAGTG 1 cut(s) 54
BtsIMutI CAGTG 1 cut(s) 54
Cac8I GCNNGC 2 cut(s) 98, 159
CfoI GCGC 2 cut(s) 70, 376
Cfr10I RCCGGY 1 cut(s) 304
Cfr13I GGNCC 2 cut(s) 428, 522
CseI GACGC 3 cut(s) 116, 150, 371
CspAI ACCGGT 1 cut(s) 304
CviAII CATG 4 cut(s) 71, 79, 158, 377
DpnI GATC 2 cut(s) 447, 507
DpnII GATC 2 cut(s) 445, 505
EaeI YGGCCR 1 cut(s) 501
EagI CGGCCG 1 cut(s) 501
Eam1104I CTCTTC 2 cut(s) 192, 219
EarI CTCTTC 2 cut(s) 192, 219
Ecl136II GAGCTC 1 cut(s) 100
EclXI CGGCCG 1 cut(s) 501
Eco130I CCWWGG 1 cut(s) 297
Eco24I GRGCYC 1 cut(s) 102
Eco47I GGWCC 2 cut(s) 428, 522
Eco52I CGGCCG 1 cut(s) 501
Eco53kI GAGCTC 1 cut(s) 100
Eco88I CYCGRG 1 cut(s) 338
EcoICRI GAGCTC 1 cut(s) 100
EcoT14I CCWWGG 1 cut(s) 297
EcoT38I GRGCYC 1 cut(s) 102
ErhI CCWWGG 1 cut(s) 297
Esp3I CGTCTC 1 cut(s) 134
FaeI CATG 4 cut(s) 74, 82, 161, 380
FalI AAGNNNNNCTT 2 cut(s) 407, 439
FatI CATG 4 cut(s) 70, 78, 157, 376
FauI CCCGC 1 cut(s) 280
FblI GTMKAC 1 cut(s) 353
Fnu4HI GCNGC 2 cut(s) 52, 402
FokI GGATG 2 cut(s) 158, 224
FriOI GRGCYC 1 cut(s) 102
Fsp4HI GCNGC 2 cut(s) 52, 402
GlaI GCGC 2 cut(s) 69, 375
GluI GCNGC 2 cut(s) 52, 402
HaeIII GGCC 1 cut(s) 503
HapII CCGG 2 cut(s) 208, 305
HgaI GACGC 3 cut(s) 116, 150, 371
HhaI GCGC 2 cut(s) 70, 376
Hin1I GRCGYC 1 cut(s) 363
Hin1II CATG 4 cut(s) 74, 82, 161, 380
Hin6I GCGC 2 cut(s) 68, 374
HinP1I GCGC 2 cut(s) 68, 374
HincII GTYRAC 1 cut(s) 255
HindII GTYRAC 1 cut(s) 255
HpaII CCGG 2 cut(s) 208, 305
Hpy166II GTNNAC 3 cut(s) 181, 255, 354
Hpy188I TCNGA 1 cut(s) 445
Hpy188III TCNNGA 1 cut(s) 346
Hpy8I GTNNAC 3 cut(s) 181, 255, 354
Hpy99I CGWCG 1 cut(s) 221
HpyCH4III ACNGT 3 cut(s) 87, 285, 526
HpyCH4IV ACGT 1 cut(s) 350
HpyCH4V TGCA 3 cut(s) 59, 181, 471
HpyF10VI GCNNNNNNNGC 3 cut(s) 65, 192, 371
HpySE526I ACGT 1 cut(s) 350
Hsp92I GRCGYC 1 cut(s) 363
Hsp92II CATG 4 cut(s) 74, 82, 161, 380
HspAI GCGC 2 cut(s) 68, 374
Kzo9I GATC 2 cut(s) 445, 505
LmnI GCTCC 1 cut(s) 48
LpnPI CCDG 2 cut(s) 221, 318
Lsp1109I GCAGC 1 cut(s) 388
LweI GCATC 1 cut(s) 136
MaeII ACGT 1 cut(s) 350
MaeIII GTNAC 1 cut(s) 346
MalI GATC 2 cut(s) 447, 507
MboI GATC 2 cut(s) 445, 505
MboII GAAGA 4 cut(s) 209, 236, 273, 418
MhlI GDGCHC 2 cut(s) 102, 183
MluCI AATT 2 cut(s) 19, 473
MnlI CCTC 6 cut(s) 103, 143, 193, 214, 220, 447
MseI TTAA 3 cut(s) 26, 513, 541
MspI CCGG 2 cut(s) 208, 305
MspR9I CCNGG 1 cut(s) 209
MvnI CGCG 1 cut(s) 195
MwoI GCNNNNNNNGC 3 cut(s) 65, 192, 371
NciI CCSGG 1 cut(s) 209
NdeII GATC 2 cut(s) 445, 505
NlaIII CATG 4 cut(s) 74, 82, 161, 380
NlaIV GGNNCC 4 cut(s) 50, 303, 430, 491
NmuCI GTSAC 1 cut(s) 346
NspI RCATGY 1 cut(s) 161
PaeI GCATGC 1 cut(s) 161
PfoI TCCNGGA 1 cut(s) 207
PinAI ACCGGT 1 cut(s) 304
PkrI GCNGC 2 cut(s) 53, 403
Ple19I CGATCG 1 cut(s) 508
Psp124BI GAGCTC 1 cut(s) 102
PspN4I GGNNCC 4 cut(s) 50, 303, 430, 491
PspPI GGNCC 2 cut(s) 428, 522
PvuI CGATCG 1 cut(s) 508
SacI GAGCTC 1 cut(s) 102
SaqAI TTAA 3 cut(s) 26, 513, 541
SatI GCNGC 2 cut(s) 52, 402
Sau3AI GATC 2 cut(s) 445, 505
Sau96I GGNCC 2 cut(s) 428, 522
ScrFI CCNGG 1 cut(s) 209
SduI GDGCHC 2 cut(s) 102, 183
SfaNI GCATC 1 cut(s) 136
SinI GGWCC 2 cut(s) 428, 522
SmlI CTYRAG 1 cut(s) 314
SmoI CTYRAG 1 cut(s) 314
SphI GCATGC 1 cut(s) 161
Sse9I AATT 2 cut(s) 19, 473
SsiI CCGC 4 cut(s) 52, 193, 243, 273
SstI GAGCTC 1 cut(s) 102
StyD4I CCNGG 1 cut(s) 207
StyI CCWWGG 1 cut(s) 297
TaaI ACNGT 3 cut(s) 87, 285, 526
TaiI ACGT 1 cut(s) 353
TaqI TCGA 1 cut(s) 123
TaqII GACCGA 1 cut(s) 434
TasI AATT 2 cut(s) 19, 473
TauI GCSGC 1 cut(s) 54
Tru1I TTAA 3 cut(s) 26, 513, 541
Tru9I TTAA 3 cut(s) 26, 513, 541
TscAI CASTG 1 cut(s) 61
TseFI GTSAC 1 cut(s) 346
TseI GCWGC 1 cut(s) 401
Tsp45I GTSAC 1 cut(s) 346
TspDTI ATGAA 1 cut(s) 405
TspGWI ACGGA 2 cut(s) 158, 310
TspRI CASTG 1 cut(s) 61
VneI GTGCAC 1 cut(s) 179
VpaK11BI GGWCC 2 cut(s) 428, 522
XapI RAATTY 1 cut(s) 473
XceI RCATGY 1 cut(s) 161
XmiI GTMKAC 1 cut(s) 353
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.