Retrotransposon gag protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 37 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 343 |
| AgsI | TTSAA | 5 cut(s) | 16, 110, 139, 428, 474 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 28 |
| AluBI | AGCT | 4 cut(s) | 74, 231, 443, 514 |
| AluI | AGCT | 4 cut(s) | 74, 231, 443, 514 |
| Alw21I | GWGCWC | 1 cut(s) | 273 |
| Alw26I | GTCTC | 1 cut(s) | 310 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 347, 416 |
| ApeKI | GCWGC | 4 cut(s) | 79, 211, 347, 443 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 11 |
| AspA2I | CCTAGG | 1 cut(s) | 325 |
| AsuC2I | CCSGG | 1 cut(s) | 460 |
| AsuHPI | GGTGA | 2 cut(s) | 448, 523 |
| AvrII | CCTAGG | 1 cut(s) | 325 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 302, 334 |
| BbsI | GAAGAC | 1 cut(s) | 438 |
| Bbv12I | GWGCWC | 1 cut(s) | 273 |
| BbvI | GCAGC | 4 cut(s) | 91, 223, 334, 430 |
| BccI | CCATC | 2 cut(s) | 280, 366 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 425, 459 |
| BcnI | CCSGG | 1 cut(s) | 460 |
| BcoDI | GTCTC | 1 cut(s) | 310 |
| BfaI | CTAG | 2 cut(s) | 326, 402 |
| BglII | AGATCT | 1 cut(s) | 49 |
| BisI | GCNGC | 4 cut(s) | 80, 212, 348, 444 |
| BlnI | CCTAGG | 1 cut(s) | 325 |
| BlpI | GCTNAGC | 1 cut(s) | 75 |
| BlsI | GCNGC | 4 cut(s) | 81, 213, 349, 445 |
| Bme1390I | CCNGG | 1 cut(s) | 460 |
| BmrFI | CCNGG | 1 cut(s) | 460 |
| BpiI | GAAGAC | 1 cut(s) | 438 |
| Bpu10I | CCTNAGC | 1 cut(s) | 278 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 75 |
| BpuEI | CTTGAG | 1 cut(s) | 500 |
| BpuMI | CCSGG | 1 cut(s) | 460 |
| BsaJI | CCNNGG | 2 cut(s) | 234, 325 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 26 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 343 |
| Bse1I | ACTGG | 3 cut(s) | 168, 366, 453 |
| BseDI | CCNNGG | 2 cut(s) | 234, 325 |
| BseGI | GGATG | 1 cut(s) | 321 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 343 |
| BseMII | CTCAG | 4 cut(s) | 80, 89, 292, 367 |
| BseNI | ACTGG | 3 cut(s) | 168, 366, 453 |
| BseXI | GCAGC | 4 cut(s) | 91, 223, 334, 430 |
| BsgI | GTGCAG | 1 cut(s) | 429 |
| BsiHKAI | GWGCWC | 1 cut(s) | 273 |
| BsiSI | CCGG | 2 cut(s) | 152, 459 |
| BslFI | GGGAC | 2 cut(s) | 43, 328 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 343 |
| BsmAI | GTCTC | 1 cut(s) | 310 |
| BsmBI | CGTCTC | 1 cut(s) | 310 |
| BsmFI | GGGAC | 2 cut(s) | 43, 328 |
| Bsp1286I | GDGCHC | 1 cut(s) | 273 |
| Bsp143I | GATC | 1 cut(s) | 49 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 75 |
| Bsp19I | CCATGG | 1 cut(s) | 234 |
| BspCNI | CTCAG | 4 cut(s) | 79, 88, 291, 366 |
| BsrI | ACTGG | 3 cut(s) | 168, 366, 453 |
| BssECI | CCNNGG | 2 cut(s) | 234, 325 |
| BssMI | GATC | 1 cut(s) | 49 |
| BssT1I | CCWWGG | 2 cut(s) | 234, 325 |
| Bst4CI | ACNGT | 2 cut(s) | 203, 343 |
| BstDEI | CTNAG | 5 cut(s) | 66, 75, 187, 278, 353 |
| BstDSI | CCRYGG | 1 cut(s) | 234 |
| BstF5I | GGATG | 1 cut(s) | 321 |
| BstKTI | GATC | 1 cut(s) | 52 |
| BstMAI | GTCTC | 1 cut(s) | 310 |
| BstMBI | GATC | 1 cut(s) | 49 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 228, 511 |
| BstNSI | RCATGY | 1 cut(s) | 226 |
| BstSCI | CCNGG | 1 cut(s) | 458 |
| BstV1I | GCAGC | 4 cut(s) | 91, 223, 334, 430 |
| BstV2I | GAAGAC | 1 cut(s) | 438 |
| BstX2I | RGATCY | 1 cut(s) | 49 |
| BstYI | RGATCY | 1 cut(s) | 49 |
| BtgI | CCRYGG | 1 cut(s) | 234 |
| BtsCI | GGATG | 1 cut(s) | 321 |
| BtsIMutI | CAGTG | 2 cut(s) | 348, 446 |
| CaiI | CAGNNNCTG | 2 cut(s) | 347, 416 |
| CseI | GACGC | 1 cut(s) | 299 |
| CviAII | CATG | 3 cut(s) | 215, 223, 235 |
| DdeI | CTNAG | 5 cut(s) | 66, 75, 187, 278, 353 |
| DpnI | GATC | 1 cut(s) | 51 |
| DpnII | GATC | 1 cut(s) | 49 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 37 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 37 |
| Eco130I | CCWWGG | 2 cut(s) | 234, 325 |
| EcoT14I | CCWWGG | 2 cut(s) | 234, 325 |
| ErhI | CCWWGG | 2 cut(s) | 234, 325 |
| Esp3I | CGTCTC | 1 cut(s) | 310 |
| FaeI | CATG | 3 cut(s) | 218, 226, 238 |
| FaiI | YATR | 8 cut(s) | 103, 126, 216, 224, 236, 296, 319, 541 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 8, 40 |
| FaqI | GGGAC | 2 cut(s) | 43, 328 |
| FatI | CATG | 3 cut(s) | 214, 222, 234 |
| Fnu4HI | GCNGC | 4 cut(s) | 80, 212, 348, 444 |
| FokI | GGATG | 1 cut(s) | 308 |
| Fsp4HI | GCNGC | 4 cut(s) | 80, 212, 348, 444 |
| FspBI | CTAG | 2 cut(s) | 326, 402 |
| GluI | GCNGC | 4 cut(s) | 80, 212, 348, 444 |
| HapII | CCGG | 2 cut(s) | 152, 459 |
| HgaI | GACGC | 1 cut(s) | 299 |
| Hin1II | CATG | 3 cut(s) | 218, 226, 238 |
| HinfI | GANTC | 4 cut(s) | 38, 89, 145, 398 |
| HpaII | CCGG | 2 cut(s) | 152, 459 |
| HphI | GGTGA | 2 cut(s) | 448, 523 |
| Hpy188I | TCNGA | 2 cut(s) | 43, 69 |
| Hpy188III | TCNNGA | 2 cut(s) | 28, 307 |
| HpyAV | CCTTC | 2 cut(s) | 34, 304 |
| HpyCH4III | ACNGT | 2 cut(s) | 203, 343 |
| HpyCH4IV | ACGT | 1 cut(s) | 303 |
| HpyCH4V | TGCA | 3 cut(s) | 387, 446, 498 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 228, 511 |
| HpyF3I | CTNAG | 5 cut(s) | 66, 75, 187, 278, 353 |
| HpySE526I | ACGT | 1 cut(s) | 303 |
| Hsp92II | CATG | 3 cut(s) | 218, 226, 238 |
| Kzo9I | GATC | 1 cut(s) | 49 |
| LmnI | GCTCC | 1 cut(s) | 236 |
| LpnPI | CCDG | 8 cut(s) | 38, 149, 165, 265, 379, 434, 472, 519 |
| Lsp1109I | GCAGC | 4 cut(s) | 91, 223, 334, 430 |
| MaeI | CTAG | 2 cut(s) | 326, 402 |
| MaeII | ACGT | 1 cut(s) | 303 |
| MaeIII | GTNAC | 1 cut(s) | 97 |
| MalI | GATC | 1 cut(s) | 51 |
| MboI | GATC | 1 cut(s) | 49 |
| MboII | GAAGA | 2 cut(s) | 440, 443 |
| MflI | RGATCY | 1 cut(s) | 49 |
| MhlI | GDGCHC | 1 cut(s) | 273 |
| MlyI | GAGTC | 1 cut(s) | 47 |
| MmeI | TCCRAC | 1 cut(s) | 21 |
| MnlI | CCTC | 3 cut(s) | 204, 388, 406 |
| MroXI | GAANNNNTTC | 1 cut(s) | 11 |
| MseI | TTAA | 1 cut(s) | 375 |
| MspI | CCGG | 2 cut(s) | 152, 459 |
| MspR9I | CCNGG | 1 cut(s) | 460 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 228, 511 |
| NciI | CCSGG | 1 cut(s) | 460 |
| NcoI | CCATGG | 1 cut(s) | 234 |
| NdeII | GATC | 1 cut(s) | 49 |
| NlaIII | CATG | 3 cut(s) | 218, 226, 238 |
| NmuCI | GTSAC | 1 cut(s) | 97 |
| NspI | RCATGY | 1 cut(s) | 226 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 33 |
| PdmI | GAANNNNTTC | 1 cut(s) | 11 |
| PfeI | GAWTC | 3 cut(s) | 89, 145, 398 |
| PkrI | GCNGC | 4 cut(s) | 81, 213, 349, 445 |
| PleI | GAGTC | 1 cut(s) | 46 |
| PpsI | GAGTC | 1 cut(s) | 46 |
| PstNI | CAGNNNCTG | 2 cut(s) | 347, 416 |
| PsuI | RGATCY | 1 cut(s) | 49 |
| SaqAI | TTAA | 1 cut(s) | 375 |
| SatI | GCNGC | 4 cut(s) | 80, 212, 348, 444 |
| Sau3AI | GATC | 1 cut(s) | 49 |
| SchI | GAGTC | 1 cut(s) | 47 |
| ScrFI | CCNGG | 1 cut(s) | 460 |
| SduI | GDGCHC | 1 cut(s) | 273 |
| SetI | ASST | 6 cut(s) | 26, 76, 233, 306, 445, 516 |
| SmlI | CTYRAG | 1 cut(s) | 515 |
| SmoI | CTYRAG | 1 cut(s) | 515 |
| SspMI | CTAG | 2 cut(s) | 326, 402 |
| StyD4I | CCNGG | 1 cut(s) | 458 |
| StyI | CCWWGG | 2 cut(s) | 234, 325 |
| TaaI | ACNGT | 2 cut(s) | 203, 343 |
| TaiI | ACGT | 1 cut(s) | 306 |
| TaqI | TCGA | 3 cut(s) | 36, 267, 308 |
| TfiI | GAWTC | 3 cut(s) | 89, 145, 398 |
| Tru1I | TTAA | 1 cut(s) | 375 |
| Tru9I | TTAA | 1 cut(s) | 375 |
| TscAI | CASTG | 2 cut(s) | 348, 453 |
| TseFI | GTSAC | 1 cut(s) | 97 |
| TseI | GCWGC | 4 cut(s) | 79, 211, 347, 443 |
| Tsp45I | GTSAC | 1 cut(s) | 97 |
| TspDTI | ATGAA | 1 cut(s) | 311 |
| TspRI | CASTG | 2 cut(s) | 348, 453 |
| XceI | RCATGY | 1 cut(s) | 226 |
| XmaJI | CCTAGG | 1 cut(s) | 325 |
| XmnI | GAANNNNTTC | 1 cut(s) | 11 |
| XspI | CTAG | 2 cut(s) | 326, 402 |