Rmu_ssc0000343.1_g000008

Reverse transcriptase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000343.1
OG0000057
Physical Location & Seq
Reverse (-)
21900 .. 23040
1141 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000343.1_g000008.1.cds

Sequence Viewer

Length: 969 bp
atggagaatattgaaaatgatcgcaagaagatagccgctgattttgaaagggaaacagcgaaaacaggccagctcatacgcgaactagaccatcgcattacccgacatgcaaaagatactaagcaacaaatcgcacaatcagagaatgcagtaagggctcatgccacaggaattgctagtattcgcaaggatggcgctaacctcccaaccgaggtggccatgcaaagagccgaattgaaccaggccagagaagtgttgaacaaaggtttaggggatcctaacgctatccttggctctcttggccagccgtctggttcgggcaagtacgtgccgccgaatcagcgagagaaggttagcagcaataccgctacaccttccgcaaccgttgctgctacaccactgaaaaataaagagcaagctctggttataggcggcagcaaagaaaatgccacctcgtcatgtggacagaccacgagacagaagcatcaggcatcaaaagttgttggagcttcgtccgaccctaccacattcgttcaatacgacagcgatggggcagaaaacatataccaagaactgccaggaagctattatgggattgaccaggctggtaacccgattaagataacagccttggcaaaagctgctcgccatactgtggcgacaccccctcctcctcctccgagcctagaatatgtaagacgtgaagaagtagaagagatgatcaggctggctaatcctagggcccaaatagatggggtctatgagggacctttccagccgcatataatgctcgcgccctttcctagggattataaaaatatcatattttctactttttcaggggaagacaccgagaatgcggcaaccaatttggccaggtttagggtgcaatgtggccagtaccagaatgatgatatcctcaaatgcaggatctttgacacttctctttcgggagctgcctttagttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

322

Amino Acids

35.05

Weight (kDa)

7.02

Isoelectric Point (pI)

36.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 813
AccB7I CCANNNNNTGG 1 cut(s) 655
AccII CGCG 2 cut(s) 81, 794
AciI CCGC 7 cut(s) 36, 332, 366, 378, 432, 779, 860
AclWI GGATC 3 cut(s) 269, 282, 938
AcoI YGGCCR 4 cut(s) 216, 301, 873, 895
AfaI GTAC 2 cut(s) 326, 902
AfiI CCNNNNNNNGG 4 cut(s) 211, 655, 804, 882
AgsI TTSAA 5 cut(s) 14, 47, 238, 259, 536
AjiI CACGTC 1 cut(s) 701
AjnI CCWGG 4 cut(s) 240, 577, 600, 875
AluBI AGCT 6 cut(s) 73, 419, 509, 585, 641, 956
AluI AGCT 6 cut(s) 73, 419, 509, 585, 641, 956
Alw26I GTCTC 1 cut(s) 469
AlwI GGATC 3 cut(s) 269, 282, 938
AoxI GGCC 7 cut(s) 67, 216, 243, 301, 741, 873, 895
ApaI GGGCCC 1 cut(s) 745
ApeKI GCWGC 5 cut(s) 357, 389, 435, 641, 956
AspA2I CCTAGG 2 cut(s) 737, 803
AspLEI GCGC 2 cut(s) 197, 796
AspS9I GGNCC 3 cut(s) 741, 742, 767
AvaII GGWCC 1 cut(s) 767
AvrII CCTAGG 2 cut(s) 737, 803
BaeGI GKGCMC 1 cut(s) 745
BalI TGGCCA 4 cut(s) 218, 303, 875, 897
BamHI GGATCC 1 cut(s) 274
BanII GRGCYC 2 cut(s) 160, 745
BauI CACGAG 1 cut(s) 472
BbsI GAAGAC 1 cut(s) 852
BbvI GCAGC 5 cut(s) 369, 376, 447, 628, 943
BccI CCATC 4 cut(s) 99, 185, 542, 746
BceAI ACGGC 1 cut(s) 292
BciT130I CCWGG 4 cut(s) 242, 579, 602, 877
BclI TGATCA 1 cut(s) 720
BcoDI GTCTC 1 cut(s) 469
BfaI CTAG 5 cut(s) 86, 177, 686, 738, 804
BfoI RGCGCY 1 cut(s) 198
BlnI CCTAGG 2 cut(s) 737, 803
Bme1390I CCNGG 4 cut(s) 242, 579, 602, 877
Bme18I GGWCC 1 cut(s) 767
BmgBI CACGTC 1 cut(s) 701
BmgT120I GGNCC 3 cut(s) 741, 742, 767
BmiI GGNNCC 3 cut(s) 276, 743, 768
BmrFI CCNGG 4 cut(s) 242, 579, 602, 877
BmsI GCATC 2 cut(s) 493, 500
BpiI GAAGAC 1 cut(s) 852
BsaAI YACGTR 1 cut(s) 328
BsaJI CCNNGG 5 cut(s) 210, 289, 630, 737, 803
BsaXI ACNNNNNCTCC 2 cut(s) 652, 682
Bsc4I CCNNNNNNNGG 4 cut(s) 211, 655, 804, 882
Bse1I ACTGG 1 cut(s) 898
Bse3DI GCAATG 1 cut(s) 896
BseBI CCWGG 4 cut(s) 242, 579, 602, 877
BseDI CCNNGG 5 cut(s) 210, 289, 630, 737, 803
BseGI GGATG 1 cut(s) 196
BseLI CCNNNNNNNGG 4 cut(s) 211, 655, 804, 882
BseMI GCAATG 1 cut(s) 896
BseNI ACTGG 1 cut(s) 898
BseRI GAGGAG 3 cut(s) 660, 663, 666
BseSI GKGCMC 1 cut(s) 745
BseXI GCAGC 5 cut(s) 369, 376, 447, 628, 943
Bsh1236I CGCG 2 cut(s) 81, 794
BshFI GGCC 7 cut(s) 69, 218, 245, 303, 743, 875, 897
BslFI GGGAC 1 cut(s) 780
BslI CCNNNNNNNGG 4 cut(s) 211, 655, 804, 882
BsmAI GTCTC 1 cut(s) 469
BsmFI GGGAC 1 cut(s) 780
BsmI GAATGC 2 cut(s) 151, 862
BsnI GGCC 7 cut(s) 69, 218, 245, 303, 743, 875, 897
Bsp120I GGGCCC 1 cut(s) 741
Bsp1286I GDGCHC 2 cut(s) 160, 745
Bsp143I GATC 4 cut(s) 19, 274, 720, 930
BspACI CCGC 7 cut(s) 36, 332, 366, 378, 432, 779, 860
BspANI GGCC 7 cut(s) 69, 218, 245, 303, 743, 875, 897
BspFNI CGCG 2 cut(s) 81, 794
BspLI GGNNCC 3 cut(s) 276, 743, 768
BspPI GGATC 3 cut(s) 269, 282, 938
BsrDI GCAATG 1 cut(s) 896
BsrI ACTGG 1 cut(s) 898
BssECI CCNNGG 5 cut(s) 210, 289, 630, 737, 803
BssMI GATC 4 cut(s) 19, 274, 720, 930
BssSI CACGAG 1 cut(s) 472
BssT1I CCWWGG 4 cut(s) 289, 630, 737, 803
Bst2BI CACGAG 1 cut(s) 472
Bst2UI CCWGG 4 cut(s) 242, 579, 602, 877
Bst4CI ACNGT 2 cut(s) 385, 655
Bst6I CTCTTC 1 cut(s) 708
BstAPI GCANNNNNTGC 3 cut(s) 386, 641, 787
BstBAI YACGTR 1 cut(s) 328
BstC8I GCNNGC 6 cut(s) 71, 305, 417, 646, 729, 792
BstDEI CTNAG 1 cut(s) 120
BstEII GGTNACC 1 cut(s) 608
BstENI CCTNNNNNAGG 1 cut(s) 802
BstF5I GGATG 1 cut(s) 196
BstFNI CGCG 2 cut(s) 81, 794
BstH2I RGCGCY 1 cut(s) 198
BstHHI GCGC 2 cut(s) 197, 796
BstKTI GATC 4 cut(s) 22, 277, 723, 933
BstMAI GTCTC 1 cut(s) 469
BstMBI GATC 4 cut(s) 19, 274, 720, 930
BstMWI GCNNNNNNNGC 7 cut(s) 155, 192, 300, 340, 386, 641, 787
BstNI CCWGG 4 cut(s) 242, 579, 602, 877
BstNSI RCATGY 1 cut(s) 110
BstPI GGTNACC 1 cut(s) 608
BstSCI CCNGG 4 cut(s) 240, 577, 600, 875
BstSLI GKGCMC 1 cut(s) 745
BstUI CGCG 2 cut(s) 81, 794
BstV1I GCAGC 5 cut(s) 369, 376, 447, 628, 943
BstV2I GAAGAC 1 cut(s) 852
BstX2I RGATCY 2 cut(s) 274, 930
BstXI CCANNNNNNTGG 2 cut(s) 311, 752
BstYI RGATCY 2 cut(s) 274, 930
BsuRI GGCC 7 cut(s) 69, 218, 245, 303, 743, 875, 897
BtgZI GCGATG 2 cut(s) 77, 561
BtrI CACGTC 1 cut(s) 701
BtsCI GGATG 1 cut(s) 196
BtsIMutI CAGTG 1 cut(s) 398
Cac8I GCNNGC 6 cut(s) 71, 305, 417, 646, 729, 792
CfoI GCGC 2 cut(s) 197, 796
Cfr13I GGNCC 3 cut(s) 741, 742, 767
Csp6I GTAC 2 cut(s) 325, 901
CspCI CAANNNNNGTGG 4 cut(s) 154, 189, 195, 230
CviAII CATG 4 cut(s) 107, 161, 220, 459
CviQI GTAC 2 cut(s) 325, 901
DdeI CTNAG 1 cut(s) 120
DpnI GATC 4 cut(s) 21, 276, 722, 932
DpnII GATC 4 cut(s) 19, 274, 720, 930
EaeI YGGCCR 4 cut(s) 216, 301, 873, 895
Eam1104I CTCTTC 1 cut(s) 708
EarI CTCTTC 1 cut(s) 708
Eco130I CCWWGG 4 cut(s) 289, 630, 737, 803
Eco24I GRGCYC 2 cut(s) 160, 745
Eco32I GATATC 1 cut(s) 916
Eco47I GGWCC 1 cut(s) 767
Eco91I GGTNACC 1 cut(s) 608
EcoNI CCTNNNNNAGG 1 cut(s) 802
EcoO109I RGGNCCY 2 cut(s) 741, 767
EcoO65I GGTNACC 1 cut(s) 608
EcoRII CCWGG 4 cut(s) 240, 577, 600, 875
EcoRV GATATC 1 cut(s) 916
EcoT14I CCWWGG 4 cut(s) 289, 630, 737, 803
EcoT38I GRGCYC 2 cut(s) 160, 745
ErhI CCWWGG 4 cut(s) 289, 630, 737, 803
FaeI CATG 4 cut(s) 110, 164, 223, 462
FaqI GGGAC 1 cut(s) 780
FatI CATG 4 cut(s) 106, 160, 219, 458
FbaI TGATCA 1 cut(s) 720
FokI GGATG 1 cut(s) 203
FriOI GRGCYC 2 cut(s) 160, 745
FspBI CTAG 5 cut(s) 86, 177, 686, 738, 804
GlaI GCGC 2 cut(s) 196, 795
HaeII RGCGCY 1 cut(s) 198
HaeIII GGCC 7 cut(s) 69, 218, 245, 303, 743, 875, 897
HhaI GCGC 2 cut(s) 197, 796
Hin1II CATG 4 cut(s) 110, 164, 223, 462
Hin6I GCGC 2 cut(s) 195, 794
HinP1I GCGC 2 cut(s) 195, 794
HinfI GANTC 1 cut(s) 337
Hpy166II GTNNAC 1 cut(s) 464
Hpy188I TCNGA 3 cut(s) 142, 517, 681
Hpy188III TCNNGA 1 cut(s) 951
Hpy8I GTNNAC 1 cut(s) 464
HpyAV CCTTC 2 cut(s) 343, 384
HpyCH4III ACNGT 2 cut(s) 385, 655
HpyCH4IV ACGT 2 cut(s) 327, 700
HpyCH4V TGCA 5 cut(s) 110, 149, 223, 889, 927
HpyF10VI GCNNNNNNNGC 7 cut(s) 155, 192, 300, 340, 386, 641, 787
HpyF3I CTNAG 1 cut(s) 120
HpySE526I ACGT 2 cut(s) 327, 700
Hsp92II CATG 4 cut(s) 110, 164, 223, 462
HspAI GCGC 2 cut(s) 195, 794
Ksp22I TGATCA 1 cut(s) 720
Kzo9I GATC 4 cut(s) 19, 274, 720, 930
LmnI GCTCC 2 cut(s) 506, 953
Lsp1109I GCAGC 5 cut(s) 369, 376, 447, 628, 943
LweI GCATC 2 cut(s) 493, 500
MaeI CTAG 5 cut(s) 86, 177, 686, 738, 804
MaeII ACGT 2 cut(s) 327, 700
MaeIII GTNAC 1 cut(s) 608
MalI GATC 4 cut(s) 21, 276, 722, 932
MboI GATC 4 cut(s) 19, 274, 720, 930
MboII GAAGA 4 cut(s) 40, 716, 725, 857
MflI RGATCY 2 cut(s) 274, 930
MhlI GDGCHC 2 cut(s) 160, 745
MlsI TGGCCA 4 cut(s) 218, 303, 875, 897
MluCI AATT 3 cut(s) 171, 233, 868
MluNI TGGCCA 4 cut(s) 218, 303, 875, 897
MmeI TCCRAC 2 cut(s) 484, 540
MnlI CCTC 9 cut(s) 205, 212, 463, 678, 681, 684, 687, 757, 929
Mox20I TGGCCA 4 cut(s) 218, 303, 875, 897
MscI TGGCCA 4 cut(s) 218, 303, 875, 897
MseI TTAA 1 cut(s) 618
Msp20I TGGCCA 4 cut(s) 218, 303, 875, 897
MspA1I CMGCKG 1 cut(s) 38
MspR9I CCNGG 4 cut(s) 242, 579, 602, 877
Mva1269I GAATGC 2 cut(s) 151, 862
MvaI CCWGG 4 cut(s) 242, 579, 602, 877
MvnI CGCG 2 cut(s) 81, 794
MwoI GCNNNNNNNGC 7 cut(s) 155, 192, 300, 340, 386, 641, 787
NdeII GATC 4 cut(s) 19, 274, 720, 930
NlaIII CATG 4 cut(s) 110, 164, 223, 462
NlaIV GGNNCC 3 cut(s) 276, 743, 768
NspI RCATGY 1 cut(s) 110
PcsI WCGNNNNNNNCGW 2 cut(s) 100, 537
PctI GAATGC 2 cut(s) 151, 862
PfeI GAWTC 1 cut(s) 337
PflMI CCANNNNNTGG 1 cut(s) 655
Ppu21I YACGTR 1 cut(s) 328
PpuMI RGGWCCY 1 cut(s) 767
PsiI TTATAA 1 cut(s) 813
Psp5II RGGWCCY 1 cut(s) 767
Psp6I CCWGG 4 cut(s) 240, 577, 600, 875
PspEI GGTNACC 1 cut(s) 608
PspGI CCWGG 4 cut(s) 240, 577, 600, 875
PspN4I GGNNCC 3 cut(s) 276, 743, 768
PspOMI GGGCCC 1 cut(s) 741
PspPI GGNCC 3 cut(s) 741, 742, 767
PspPPI RGGWCCY 1 cut(s) 767
PsuI RGATCY 2 cut(s) 274, 930
RsaI GTAC 2 cut(s) 326, 902
RsaNI GTAC 2 cut(s) 325, 901
SaqAI TTAA 1 cut(s) 618
Sau3AI GATC 4 cut(s) 19, 274, 720, 930
Sau96I GGNCC 3 cut(s) 741, 742, 767
ScrFI CCNGG 4 cut(s) 242, 579, 602, 877
SduI GDGCHC 2 cut(s) 160, 745
SfaNI GCATC 2 cut(s) 493, 500
SinI GGWCC 1 cut(s) 767
Sse9I AATT 3 cut(s) 171, 233, 868
SsiI CCGC 7 cut(s) 36, 332, 366, 378, 432, 779, 860
SspI AATATT 1 cut(s) 10
SspMI CTAG 5 cut(s) 86, 177, 686, 738, 804
StyD4I CCNGG 4 cut(s) 240, 577, 600, 875
StyI CCWWGG 4 cut(s) 289, 630, 737, 803
TaaI ACNGT 2 cut(s) 385, 655
TaiI ACGT 2 cut(s) 330, 703
TasI AATT 3 cut(s) 171, 233, 868
TauI GCSGC 5 cut(s) 38, 334, 435, 781, 863
TfiI GAWTC 1 cut(s) 337
Tru1I TTAA 1 cut(s) 618
Tru9I TTAA 1 cut(s) 618
TscAI CASTG 1 cut(s) 405
TseI GCWGC 5 cut(s) 357, 389, 435, 641, 956
TspRI CASTG 1 cut(s) 405
Van91I CCANNNNNTGG 1 cut(s) 655
VpaK11BI GGWCC 1 cut(s) 767
XagI CCTNNNNNAGG 1 cut(s) 802
XceI RCATGY 1 cut(s) 110
XmaJI CCTAGG 2 cut(s) 737, 803
XspI CTAG 5 cut(s) 86, 177, 686, 738, 804
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.