Rroxscaffold_1G00050610

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000057
Physical Location & Seq
Forward (+)
71129648 .. 71132085
2438 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00050610.1

Sequence Viewer

Length: 1086 bp
ATGGCGGGTCTTCGCAAGGATGGCGCTAACCTTGCTACCGAAGTGGCTATGCAGAGAGCCGAACCGAACCGGGCGAGAGAGAGAAGGGACAGCGAATGTGAACCAAGTAGTACTCTCGCAGTCGCTCGCCATGCTACGACGATACCTCATCCTCCTCCTCCGCCCCCCGAATACGTAAGGCGTGAAGAGATAGAGGAGATGATCGGCCGGCTAATCCTAGGGCCCAAATGGATGGGGTCTATAAAGGTCCTTTCCTCGCCACATATAATGCTCGCGCCTTTTCCCGTGGTTATAAAAATATCATATTTTCTACTTTTTCGGGGGAAGACACCCGAGAGTGCGACAACCCATTTGGCCGGGTTCGTGTGCAACGCGCCGCACTCGAATGATGATGTCCTCAAGTGTAGGATCTTTGGCATTTCTCTCGTCGGAGTCGCTTTCCGATGGTTTGCCAAACTTCGACCAGAACCGTGGCGCATTGGCCGATGGAAAAGCTCTTCCGAGAAACCTTTAGGGCCATCGAGCCCGAGGTTGACTTGGCTTCACTCACTCGGATGGCCCAACGGCCTACGCAGTCCGTCGGGGCAAGAAAGAAAATCGCGCGACGATGACACTCCCGCAAAGAAGAAAGCTAAACCGGCTGGTCGCTTCCCCGTGGTCTTATGCTCGCGATGCAAAGAAGAGTGTGGCATCCAAAGTGTTATCCAAGAGAACAAGCATCATTTCGCTTCGGCTCTCTCCCACCTTTCGAGCGGGCCTAGTCATCGCGGAACTATCAACCTTCCAGCTCGAAAAGAGAAAATGAATACGGAGCTACCGCCATCCCCAAAGGATTCCACTATGTTCAAGAAGTTAAGAGCGGCCGCGGTTGCTCGAAACAAGAGGAGCAGGGTTGCAAACAAGCATAAAGAGGTTCGAGGAAGCCAGCGCTCTCGGGAGGCTCTAGATCGGGGCCCGATTAAGCCTTCGCAGATTGGTCAAATCACCCGAGCAATATCGAAGGAGATGGAGACGCCGGTTGCTAAGCCATTGATGGCTCCCCGCAGCCTTCACGGAAGAGCAAGCTCCGCAACGGGGGACATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

361

Amino Acids

39.99

Weight (kDa)

10.44

Isoelectric Point (pI)

65.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 293
AccBSI CCGCTC 2 cut(s) 753, 860
AccII CGCG 7 cut(s) 275, 374, 601, 603, 670, 768, 866
AclWI GGATC 1 cut(s) 416
AcoI YGGCCR 4 cut(s) 205, 354, 481, 861
AcyI GRCGYC 1 cut(s) 1013
AfaI GTAC 1 cut(s) 112
AfeI AGCGCT 1 cut(s) 929
AfiI CCNNNNNNNGG 1 cut(s) 1074
AgsI TTSAA 1 cut(s) 847
AluBI AGCT 5 cut(s) 495, 632, 788, 814, 1065
AluI AGCT 5 cut(s) 495, 632, 788, 814, 1065
Alw26I GTCTC 1 cut(s) 1004
AlwI GGATC 1 cut(s) 416
Ama87I CYCGRG 4 cut(s) 332, 526, 933, 987
Aor51HI AGCGCT 1 cut(s) 929
ApaI GGGCCC 2 cut(s) 225, 956
ApeKI GCWGC 1 cut(s) 1044
ArsI GACNNNNNNTTYG 2 cut(s) 334, 366
AspA2I CCTAGG 1 cut(s) 217
AspLEI GCGC 6 cut(s) 26, 277, 376, 477, 603, 930
AspS9I GGNCC 8 cut(s) 221, 222, 247, 515, 558, 755, 952, 953
AsuC2I CCSGG 2 cut(s) 71, 358
AsuHPI GGTGA 1 cut(s) 976
AvaI CYCGRG 4 cut(s) 332, 526, 933, 987
AvaII GGWCC 1 cut(s) 247
AvrII CCTAGG 1 cut(s) 217
BaeGI GKGCMC 2 cut(s) 225, 956
BanII GRGCYC 3 cut(s) 225, 527, 956
BbsI GAAGAC 2 cut(s) 2, 332
BbvI GCAGC 1 cut(s) 1056
BccI CCATC 9 cut(s) 14, 226, 438, 480, 526, 549, 829, 1000, 1027
BceAI ACGGC 1 cut(s) 580
BcgI CGANNNNNNTGC 2 cut(s) 406, 440
BcnI CCSGG 2 cut(s) 71, 358
BcoDI GTCTC 1 cut(s) 1004
BfaI CTAG 3 cut(s) 218, 759, 944
BfoI RGCGCY 2 cut(s) 27, 931
BisI GCNGC 4 cut(s) 377, 861, 864, 1045
BlnI CCTAGG 1 cut(s) 217
BlpI GCTNAGC 1 cut(s) 1023
BlsI GCNGC 4 cut(s) 378, 862, 865, 1046
BmcAI AGTACT 1 cut(s) 112
Bme1390I CCNGG 2 cut(s) 71, 358
Bme18I GGWCC 1 cut(s) 247
BmeT110I CYCGRG 4 cut(s) 332, 526, 933, 987
BmgT120I GGNCC 8 cut(s) 221, 222, 247, 515, 558, 755, 952, 953
BmiI GGNNCC 4 cut(s) 223, 953, 954, 1038
BmrFI CCNGG 2 cut(s) 71, 358
BmsI GCATC 3 cut(s) 662, 699, 727
BpiI GAAGAC 2 cut(s) 2, 332
Bpu1102I GCTNAGC 1 cut(s) 1023
BpuEI CTTGAG 1 cut(s) 383
BpuMI CCSGG 2 cut(s) 71, 358
BsaAI YACGTR 1 cut(s) 175
BsaHI GRCGYC 1 cut(s) 1013
BsaJI CCNNGG 6 cut(s) 217, 285, 470, 527, 654, 864
Bsc4I CCNNNNNNNGG 1 cut(s) 1074
Bse118I RCCGGY 3 cut(s) 207, 637, 1015
BseDI CCNNGG 6 cut(s) 217, 285, 470, 527, 654, 864
BseGI GGATG 6 cut(s) 25, 148, 237, 560, 690, 821
BseLI CCNNNNNNNGG 1 cut(s) 1074
BseRI GAGGAG 4 cut(s) 144, 147, 209, 898
BseSI GKGCMC 2 cut(s) 225, 956
BseX3I CGGCCG 2 cut(s) 205, 861
BseXI GCAGC 1 cut(s) 1056
Bsh1236I CGCG 7 cut(s) 275, 374, 601, 603, 670, 768, 866
Bsh1285I CGRYCG 2 cut(s) 208, 864
BsiEI CGRYCG 2 cut(s) 208, 864
BsiHKCI CYCGRG 4 cut(s) 332, 526, 933, 987
BsiSI CCGG 5 cut(s) 70, 208, 357, 638, 1016
BslFI GGGAC 1 cut(s) 101
BslI CCNNNNNNNGG 1 cut(s) 1074
BsmAI GTCTC 1 cut(s) 1004
BsmBI CGTCTC 1 cut(s) 1004
BsmFI GGGAC 1 cut(s) 101
BsoBI CYCGRG 4 cut(s) 332, 526, 933, 987
Bsp120I GGGCCC 2 cut(s) 221, 952
Bsp1286I GDGCHC 3 cut(s) 225, 527, 956
Bsp143I GATC 3 cut(s) 201, 408, 946
Bsp1720I GCTNAGC 1 cut(s) 1023
Bsp68I TCGCGA 1 cut(s) 670
BspFNI CGCG 7 cut(s) 275, 374, 601, 603, 670, 768, 866
BspLI GGNNCC 4 cut(s) 223, 953, 954, 1038
BspPI GGATC 1 cut(s) 416
BspQI GCTCTTC 2 cut(s) 502, 1051
BsrBI CCGCTC 2 cut(s) 753, 860
BsrFI RCCGGY 3 cut(s) 207, 637, 1015
BssAI RCCGGY 3 cut(s) 207, 637, 1015
BssECI CCNNGG 6 cut(s) 217, 285, 470, 527, 654, 864
BssMI GATC 3 cut(s) 201, 408, 946
BssNI GRCGYC 1 cut(s) 1013
BssT1I CCWWGG 1 cut(s) 217
Bst4CI ACNGT 1 cut(s) 471
Bst6I CTCTTC 4 cut(s) 180, 502, 675, 1051
BstACI GRCGYC 1 cut(s) 1013
BstBAI YACGTR 1 cut(s) 175
BstC8I GCNNGC 7 cut(s) 127, 209, 273, 668, 755, 926, 1063
BstDEI CTNAG 1 cut(s) 1023
BstDSI CCRYGG 4 cut(s) 285, 470, 654, 864
BstF5I GGATG 6 cut(s) 25, 148, 237, 560, 690, 821
BstFNI CGCG 7 cut(s) 275, 374, 601, 603, 670, 768, 866
BstH2I RGCGCY 2 cut(s) 27, 931
BstHHI GCGC 6 cut(s) 26, 277, 376, 477, 603, 930
BstKTI GATC 3 cut(s) 204, 411, 949
BstMAI GTCTC 1 cut(s) 1004
BstMBI GATC 3 cut(s) 201, 408, 946
BstMCI CGRYCG 2 cut(s) 208, 864
BstMWI GCNNNNNNNGC 7 cut(s) 21, 32, 131, 638, 672, 869, 1067
BstSCI CCNGG 2 cut(s) 69, 356
BstSLI GKGCMC 2 cut(s) 225, 956
BstSNI TACGTA 1 cut(s) 175
BstUI CGCG 7 cut(s) 275, 374, 601, 603, 670, 768, 866
BstV1I GCAGC 1 cut(s) 1056
BstV2I GAAGAC 2 cut(s) 2, 332
BstX2I RGATCY 1 cut(s) 408
BstXI CCANNNNNNTGG 2 cut(s) 232, 471
BstYI RGATCY 1 cut(s) 408
BstZI CGGCCG 2 cut(s) 205, 861
BtgI CCRYGG 4 cut(s) 285, 470, 654, 864
BtgZI GCGATG 2 cut(s) 685, 749
BtsCI GGATG 6 cut(s) 25, 148, 237, 560, 690, 821
BtuMI TCGCGA 1 cut(s) 670
Cac8I GCNNGC 7 cut(s) 127, 209, 273, 668, 755, 926, 1063
CciNI GCGGCCGC 1 cut(s) 861
CfoI GCGC 6 cut(s) 26, 277, 376, 477, 603, 930
Cfr10I RCCGGY 3 cut(s) 207, 637, 1015
Cfr13I GGNCC 8 cut(s) 221, 222, 247, 515, 558, 755, 952, 953
Cfr42I CCGCGG 1 cut(s) 867
CseI GACGC 1 cut(s) 1021
Csp6I GTAC 1 cut(s) 111
CviAII CATG 1 cut(s) 131
CviQI GTAC 1 cut(s) 111
DdeI CTNAG 1 cut(s) 1023
DpnI GATC 3 cut(s) 203, 410, 948
DpnII GATC 3 cut(s) 201, 408, 946
EaeI YGGCCR 4 cut(s) 205, 354, 481, 861
EagI CGGCCG 2 cut(s) 205, 861
Eam1104I CTCTTC 4 cut(s) 180, 502, 675, 1051
EarI CTCTTC 4 cut(s) 180, 502, 675, 1051
EciI GGCGGA 1 cut(s) 150
EclXI CGGCCG 2 cut(s) 205, 861
Eco105I TACGTA 1 cut(s) 175
Eco130I CCWWGG 1 cut(s) 217
Eco24I GRGCYC 3 cut(s) 225, 527, 956
Eco47I GGWCC 1 cut(s) 247
Eco47III AGCGCT 1 cut(s) 929
Eco52I CGGCCG 2 cut(s) 205, 861
Eco88I CYCGRG 4 cut(s) 332, 526, 933, 987
EcoO109I RGGNCCY 3 cut(s) 221, 247, 952
EcoT14I CCWWGG 1 cut(s) 217
EcoT38I GRGCYC 3 cut(s) 225, 527, 956
ErhI CCWWGG 1 cut(s) 217
Esp3I CGTCTC 1 cut(s) 1004
FaeI CATG 1 cut(s) 134
FaqI GGGAC 1 cut(s) 101
FatI CATG 1 cut(s) 130
FauI CCCGC 3 cut(s) 625, 746, 1049
Fnu4HI GCNGC 4 cut(s) 377, 861, 864, 1045
FokI GGATG 6 cut(s) 32, 135, 244, 567, 677, 808
FriOI GRGCYC 3 cut(s) 225, 527, 956
Fsp4HI GCNGC 4 cut(s) 377, 861, 864, 1045
FspBI CTAG 3 cut(s) 218, 759, 944
GlaI GCGC 6 cut(s) 25, 276, 375, 476, 602, 929
GluI GCNGC 4 cut(s) 377, 861, 864, 1045
HaeII RGCGCY 2 cut(s) 27, 931
HapII CCGG 5 cut(s) 70, 208, 357, 638, 1016
HgaI GACGC 1 cut(s) 1021
HhaI GCGC 6 cut(s) 26, 277, 376, 477, 603, 930
Hin1I GRCGYC 1 cut(s) 1013
Hin1II CATG 1 cut(s) 134
Hin6I GCGC 6 cut(s) 24, 275, 374, 475, 601, 928
HinP1I GCGC 6 cut(s) 24, 275, 374, 475, 601, 928
HincII GTYRAC 1 cut(s) 534
HindII GTYRAC 1 cut(s) 534
HinfI GANTC 2 cut(s) 432, 833
HpaII CCGG 5 cut(s) 70, 208, 357, 638, 1016
HphI GGTGA 1 cut(s) 976
Hpy166II GTNNAC 2 cut(s) 101, 534
Hpy188I TCNGA 4 cut(s) 431, 443, 502, 554
Hpy188III TCNNGA 4 cut(s) 669, 847, 935, 944
Hpy8I GTNNAC 2 cut(s) 101, 534
Hpy99I CGWCG 4 cut(s) 142, 431, 583, 608
HpyAV CCTTC 5 cut(s) 78, 791, 975, 994, 1058
HpyCH4III ACNGT 1 cut(s) 471
HpyCH4IV ACGT 1 cut(s) 174
HpyCH4V TGCA 4 cut(s) 52, 369, 675, 896
HpyF10VI GCNNNNNNNGC 7 cut(s) 21, 32, 131, 638, 672, 869, 1067
HpyF3I CTNAG 1 cut(s) 1023
HpySE526I ACGT 1 cut(s) 174
Hsp92I GRCGYC 1 cut(s) 1013
Hsp92II CATG 1 cut(s) 134
HspAI GCGC 6 cut(s) 24, 275, 374, 475, 601, 928
KroI GCCGGC 1 cut(s) 207
KroNI GCCGGC 1 cut(s) 209
KspI CCGCGG 1 cut(s) 867
Kzo9I GATC 3 cut(s) 201, 408, 946
LguI GCTCTTC 2 cut(s) 502, 1051
LmnI GCTCC 4 cut(s) 811, 885, 1042, 1070
Lsp1109I GCAGC 1 cut(s) 1056
LweI GCATC 3 cut(s) 662, 699, 727
MaeI CTAG 3 cut(s) 218, 759, 944
MaeII ACGT 1 cut(s) 174
MalI GATC 3 cut(s) 203, 410, 948
MbiI CCGCTC 2 cut(s) 753, 860
MboI GATC 3 cut(s) 201, 408, 946
MboII GAAGA 6 cut(s) 197, 337, 489, 637, 692, 1068
MflI RGATCY 1 cut(s) 408
MhlI GDGCHC 3 cut(s) 225, 527, 956
MlyI GAGTC 1 cut(s) 441
MmeI TCCRAC 1 cut(s) 409
MroNI GCCGGC 1 cut(s) 207
MseI TTAA 2 cut(s) 854, 960
MslI CAYNNNNRTG 2 cut(s) 384, 553
MspA1I CMGCKG 1 cut(s) 866
MspI CCGG 5 cut(s) 70, 208, 357, 638, 1016
MspR9I CCNGG 2 cut(s) 71, 358
MvnI CGCG 7 cut(s) 275, 374, 601, 603, 670, 768, 866
MwoI GCNNNNNNNGC 7 cut(s) 21, 32, 131, 638, 672, 869, 1067
NaeI GCCGGC 1 cut(s) 209
NciI CCSGG 2 cut(s) 71, 358
NdeII GATC 3 cut(s) 201, 408, 946
NgoMIV GCCGGC 1 cut(s) 207
NlaIII CATG 1 cut(s) 134
NlaIV GGNNCC 4 cut(s) 223, 953, 954, 1038
NotI GCGGCCGC 1 cut(s) 861
NruI TCGCGA 1 cut(s) 670
PciSI GCTCTTC 2 cut(s) 502, 1051
PdiI GCCGGC 1 cut(s) 209
PfeI GAWTC 1 cut(s) 833
PkrI GCNGC 4 cut(s) 378, 862, 865, 1046
PleI GAGTC 1 cut(s) 440
PpsI GAGTC 1 cut(s) 440
Ppu21I YACGTR 1 cut(s) 175
PpuMI RGGWCCY 1 cut(s) 247
PsiI TTATAA 1 cut(s) 293
Psp5II RGGWCCY 1 cut(s) 247
PspN4I GGNNCC 4 cut(s) 223, 953, 954, 1038
PspOMI GGGCCC 2 cut(s) 221, 952
PspPI GGNCC 8 cut(s) 221, 222, 247, 515, 558, 755, 952, 953
PspPPI RGGWCCY 1 cut(s) 247
PsuI RGATCY 1 cut(s) 408
RruI TCGCGA 1 cut(s) 670
RsaI GTAC 1 cut(s) 112
RsaNI GTAC 1 cut(s) 111
RseI CAYNNNNRTG 2 cut(s) 384, 553
SacII CCGCGG 1 cut(s) 867
SapI GCTCTTC 2 cut(s) 502, 1051
SaqAI TTAA 2 cut(s) 854, 960
SatI GCNGC 4 cut(s) 377, 861, 864, 1045
Sau3AI GATC 3 cut(s) 201, 408, 946
Sau96I GGNCC 8 cut(s) 221, 222, 247, 515, 558, 755, 952, 953
ScaI AGTACT 1 cut(s) 112
SchI GAGTC 1 cut(s) 441
ScrFI CCNGG 2 cut(s) 71, 358
SduI GDGCHC 3 cut(s) 225, 527, 956
SfaNI GCATC 3 cut(s) 662, 699, 727
Sfr303I CCGCGG 1 cut(s) 867
SgrBI CCGCGG 1 cut(s) 867
SinI GGWCC 1 cut(s) 247
SmiMI CAYNNNNRTG 2 cut(s) 384, 553
SmlI CTYRAG 1 cut(s) 398
SmoI CTYRAG 1 cut(s) 398
SnaBI TACGTA 1 cut(s) 175
SspMI CTAG 3 cut(s) 218, 759, 944
StyD4I CCNGG 2 cut(s) 69, 356
StyI CCWWGG 1 cut(s) 217
TaaI ACNGT 1 cut(s) 471
TaiI ACGT 1 cut(s) 177
TaqI TCGA 8 cut(s) 383, 460, 521, 749, 790, 874, 916, 998
TatI WGTACW 1 cut(s) 110
TauI GCSGC 3 cut(s) 379, 863, 866
TfiI GAWTC 1 cut(s) 833
Tru1I TTAA 2 cut(s) 854, 960
Tru9I TTAA 2 cut(s) 854, 960
TseI GCWGC 1 cut(s) 1044
TspDTI ATGAA 1 cut(s) 818
TspGWI ACGGA 3 cut(s) 567, 824, 1068
VpaK11BI GGWCC 1 cut(s) 247
XbaI TCTAGA 1 cut(s) 943
XmaJI CCTAGG 1 cut(s) 217
XspI CTAG 3 cut(s) 218, 759, 944
ZrmI AGTACT 1 cut(s) 112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.