Sister chromatid cohesion protein PDS5 homolog
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 532 |
| Acc36I | ACCTGC | 1 cut(s) | 532 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 846 |
| AccBSI | CCGCTC | 1 cut(s) | 953 |
| AccI | GTMKAC | 1 cut(s) | 576 |
| AccII | CGCG | 3 cut(s) | 485, 763, 862 |
| AclWI | GGATC | 1 cut(s) | 611 |
| AcoI | YGGCCR | 1 cut(s) | 954 |
| AcsI | RAATTY | 3 cut(s) | 273, 323, 510 |
| AfaI | GTAC | 2 cut(s) | 118, 335 |
| AfeI | AGCGCT | 1 cut(s) | 570 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 514, 846 |
| AgsI | TTSAA | 3 cut(s) | 397, 788, 931 |
| AjnI | CCWGG | 2 cut(s) | 86, 189 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 308, 340 |
| AleI | CACNNNNGTG | 1 cut(s) | 1033 |
| AluBI | AGCT | 5 cut(s) | 135, 235, 433, 551, 666 |
| AluI | AGCT | 5 cut(s) | 135, 235, 433, 551, 666 |
| Alw21I | GWGCWC | 1 cut(s) | 668 |
| Alw26I | GTCTC | 2 cut(s) | 323, 640 |
| AlwI | GGATC | 1 cut(s) | 611 |
| Ama87I | CYCGRG | 1 cut(s) | 883 |
| Aor51HI | AGCGCT | 1 cut(s) | 570 |
| AoxI | GGCC | 2 cut(s) | 126, 954 |
| ApeKI | GCWGC | 2 cut(s) | 224, 566 |
| ApoI | RAATTY | 3 cut(s) | 273, 323, 510 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 643, 675 |
| AspLEI | GCGC | 2 cut(s) | 358, 571 |
| AspS9I | GGNCC | 5 cut(s) | 127, 187, 410, 627, 751 |
| AsuC2I | CCSGG | 1 cut(s) | 105 |
| AsuHPI | GGTGA | 3 cut(s) | 304, 692, 900 |
| AvaI | CYCGRG | 1 cut(s) | 883 |
| AvaII | GGWCC | 4 cut(s) | 187, 410, 627, 751 |
| BanII | GRGCYC | 1 cut(s) | 668 |
| BauI | CACGAG | 1 cut(s) | 359 |
| BbsI | GAAGAC | 2 cut(s) | 254, 404 |
| Bbv12I | GWGCWC | 1 cut(s) | 668 |
| BbvI | GCAGC | 2 cut(s) | 211, 578 |
| BccI | CCATC | 5 cut(s) | 7, 174, 298, 848, 922 |
| BceAI | ACGGC | 2 cut(s) | 576, 677 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 206, 240 |
| BciT130I | CCWGG | 2 cut(s) | 88, 191 |
| BclI | TGATCA | 1 cut(s) | 964 |
| BcnI | CCSGG | 1 cut(s) | 105 |
| BcoDI | GTCTC | 2 cut(s) | 323, 640 |
| BfaI | CTAG | 3 cut(s) | 572, 600, 879 |
| BfoI | RGCGCY | 1 cut(s) | 572 |
| BfuAI | ACCTGC | 1 cut(s) | 532 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 353 |
| BisI | GCNGC | 7 cut(s) | 126, 225, 564, 567, 781, 954, 957 |
| BlsI | GCNGC | 7 cut(s) | 127, 226, 565, 568, 782, 955, 958 |
| Bme1390I | CCNGG | 3 cut(s) | 88, 105, 191 |
| Bme18I | GGWCC | 4 cut(s) | 187, 410, 627, 751 |
| BmeT110I | CYCGRG | 1 cut(s) | 883 |
| BmgT120I | GGNCC | 5 cut(s) | 127, 187, 410, 627, 751 |
| BmiI | GGNNCC | 2 cut(s) | 285, 473 |
| BmrFI | CCNGG | 3 cut(s) | 88, 105, 191 |
| BmsI | GCATC | 5 cut(s) | 58, 58, 92, 334, 755 |
| BpiI | GAAGAC | 2 cut(s) | 254, 404 |
| Bpu10I | CCTNAGC | 1 cut(s) | 131 |
| BpuMI | CCSGG | 1 cut(s) | 105 |
| Bsa29I | ATCGAT | 1 cut(s) | 302 |
| BsaAI | YACGTR | 1 cut(s) | 100 |
| BsaI | GGTCTC | 1 cut(s) | 640 |
| BsaJI | CCNNGG | 6 cut(s) | 87, 279, 483, 654, 693, 920 |
| BsaWI | WCCGGW | 1 cut(s) | 553 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 514, 846 |
| Bse118I | RCCGGY | 2 cut(s) | 142, 1030 |
| BseBI | CCWGG | 2 cut(s) | 88, 191 |
| BseCI | ATCGAT | 1 cut(s) | 302 |
| BseDI | CCNNGG | 6 cut(s) | 87, 279, 483, 654, 693, 920 |
| BseGI | GGATG | 3 cut(s) | 83, 199, 914 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 514, 846 |
| BseMII | CTCAG | 2 cut(s) | 70, 122 |
| BseRI | GAGGAG | 1 cut(s) | 44 |
| BseX3I | CGGCCG | 1 cut(s) | 954 |
| BseXI | GCAGC | 2 cut(s) | 211, 578 |
| Bsh1236I | CGCG | 3 cut(s) | 485, 763, 862 |
| Bsh1285I | CGRYCG | 1 cut(s) | 957 |
| BshFI | GGCC | 2 cut(s) | 128, 956 |
| BshVI | ATCGAT | 1 cut(s) | 302 |
| BsiEI | CGRYCG | 1 cut(s) | 957 |
| BsiHKAI | GWGCWC | 1 cut(s) | 668 |
| BsiHKCI | CYCGRG | 1 cut(s) | 883 |
| BsiSI | CCGG | 4 cut(s) | 104, 143, 554, 1031 |
| BslFI | GGGAC | 1 cut(s) | 938 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 514, 846 |
| BsmAI | GTCTC | 2 cut(s) | 323, 640 |
| BsmBI | CGTCTC | 1 cut(s) | 323 |
| BsmFI | GGGAC | 1 cut(s) | 938 |
| BsmI | GAATGC | 3 cut(s) | 85, 782, 783 |
| BsnI | GGCC | 2 cut(s) | 128, 956 |
| Bso31I | GGTCTC | 1 cut(s) | 640 |
| BsoBI | CYCGRG | 1 cut(s) | 883 |
| Bsp1286I | GDGCHC | 1 cut(s) | 668 |
| Bsp143I | GATC | 3 cut(s) | 378, 603, 964 |
| Bsp68I | TCGCGA | 1 cut(s) | 763 |
| BspANI | GGCC | 2 cut(s) | 128, 956 |
| BspCNI | CTCAG | 2 cut(s) | 69, 123 |
| BspDI | ATCGAT | 1 cut(s) | 302 |
| BspFNI | CGCG | 3 cut(s) | 485, 763, 862 |
| BspLI | GGNNCC | 2 cut(s) | 285, 473 |
| BspMI | ACCTGC | 1 cut(s) | 532 |
| BspPI | GGATC | 1 cut(s) | 611 |
| BspTNI | GGTCTC | 1 cut(s) | 640 |
| BsrBI | CCGCTC | 1 cut(s) | 953 |
| BsrFI | RCCGGY | 2 cut(s) | 142, 1030 |
| BssAI | RCCGGY | 2 cut(s) | 142, 1030 |
| BssECI | CCNNGG | 6 cut(s) | 87, 279, 483, 654, 693, 920 |
| BssMI | GATC | 3 cut(s) | 378, 603, 964 |
| BssSI | CACGAG | 1 cut(s) | 359 |
| BssT1I | CCWWGG | 3 cut(s) | 279, 654, 920 |
| Bst2BI | CACGAG | 1 cut(s) | 359 |
| Bst2UI | CCWGG | 2 cut(s) | 88, 191 |
| Bst4CI | ACNGT | 2 cut(s) | 121, 491 |
| Bst6I | CTCTTC | 4 cut(s) | 174, 195, 201, 795 |
| BstBAI | YACGTR | 1 cut(s) | 100 |
| BstC8I | GCNNGC | 2 cut(s) | 144, 761 |
| BstDEI | CTNAG | 2 cut(s) | 56, 131 |
| BstDSI | CCRYGG | 2 cut(s) | 483, 693 |
| BstF5I | GGATG | 3 cut(s) | 83, 199, 914 |
| BstFNI | CGCG | 3 cut(s) | 485, 763, 862 |
| BstH2I | RGCGCY | 1 cut(s) | 572 |
| BstHHI | GCGC | 2 cut(s) | 358, 571 |
| BstKTI | GATC | 3 cut(s) | 381, 606, 967 |
| BstMAI | GTCTC | 2 cut(s) | 323, 640 |
| BstMBI | GATC | 3 cut(s) | 378, 603, 964 |
| BstMCI | CGRYCG | 1 cut(s) | 957 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 353, 765, 1015 |
| BstNI | CCWGG | 2 cut(s) | 88, 191 |
| BstNSI | RCATGY | 1 cut(s) | 1009 |
| BstSCI | CCNGG | 3 cut(s) | 86, 103, 189 |
| BstUI | CGCG | 3 cut(s) | 485, 763, 862 |
| BstV1I | GCAGC | 2 cut(s) | 211, 578 |
| BstV2I | GAAGAC | 2 cut(s) | 254, 404 |
| BstZI | CGGCCG | 1 cut(s) | 954 |
| Bsu15I | ATCGAT | 1 cut(s) | 302 |
| BsuRI | GGCC | 2 cut(s) | 128, 956 |
| BsuTUI | ATCGAT | 1 cut(s) | 302 |
| BtgI | CCRYGG | 2 cut(s) | 483, 693 |
| BtgZI | GCGATG | 2 cut(s) | 778, 843 |
| BtsCI | GGATG | 3 cut(s) | 83, 199, 914 |
| BtuMI | TCGCGA | 1 cut(s) | 763 |
| BveI | ACCTGC | 1 cut(s) | 532 |
| Cac8I | GCNNGC | 2 cut(s) | 144, 761 |
| CciNI | GCGGCCGC | 1 cut(s) | 954 |
| CfoI | GCGC | 2 cut(s) | 358, 571 |
| Cfr10I | RCCGGY | 2 cut(s) | 142, 1030 |
| Cfr13I | GGNCC | 5 cut(s) | 127, 187, 410, 627, 751 |
| Cfr42I | CCGCGG | 1 cut(s) | 486 |
| ClaI | ATCGAT | 1 cut(s) | 302 |
| Csp6I | GTAC | 2 cut(s) | 117, 334 |
| CviAII | CATG | 4 cut(s) | 797, 974, 988, 1006 |
| CviQI | GTAC | 2 cut(s) | 117, 334 |
| DdeI | CTNAG | 2 cut(s) | 56, 131 |
| DpnI | GATC | 3 cut(s) | 380, 605, 966 |
| DpnII | GATC | 3 cut(s) | 378, 603, 964 |
| EaeI | YGGCCR | 1 cut(s) | 954 |
| EagI | CGGCCG | 1 cut(s) | 954 |
| Eam1104I | CTCTTC | 4 cut(s) | 174, 195, 201, 795 |
| EarI | CTCTTC | 4 cut(s) | 174, 195, 201, 795 |
| EciI | GGCGGA | 1 cut(s) | 679 |
| Ecl136II | GAGCTC | 1 cut(s) | 666 |
| EclXI | CGGCCG | 1 cut(s) | 954 |
| Eco130I | CCWWGG | 3 cut(s) | 279, 654, 920 |
| Eco24I | GRGCYC | 1 cut(s) | 668 |
| Eco31I | GGTCTC | 1 cut(s) | 640 |
| Eco47I | GGWCC | 4 cut(s) | 187, 410, 627, 751 |
| Eco47III | AGCGCT | 1 cut(s) | 570 |
| Eco52I | CGGCCG | 1 cut(s) | 954 |
| Eco53kI | GAGCTC | 1 cut(s) | 666 |
| Eco88I | CYCGRG | 1 cut(s) | 883 |
| EcoICRI | GAGCTC | 1 cut(s) | 666 |
| EcoRI | GAATTC | 1 cut(s) | 323 |
| EcoRII | CCWGG | 2 cut(s) | 86, 189 |
| EcoT14I | CCWWGG | 3 cut(s) | 279, 654, 920 |
| EcoT22I | ATGCAT | 1 cut(s) | 85 |
| EcoT38I | GRGCYC | 1 cut(s) | 668 |
| ErhI | CCWWGG | 3 cut(s) | 279, 654, 920 |
| Esp3I | CGTCTC | 1 cut(s) | 323 |
| FaeI | CATG | 4 cut(s) | 800, 977, 991, 1009 |
| FaqI | GGGAC | 1 cut(s) | 938 |
| FatI | CATG | 4 cut(s) | 796, 973, 987, 1005 |
| FauNDI | CATATG | 1 cut(s) | 340 |
| FbaI | TGATCA | 1 cut(s) | 964 |
| FblI | GTMKAC | 1 cut(s) | 576 |
| Fnu4HI | GCNGC | 7 cut(s) | 126, 225, 564, 567, 781, 954, 957 |
| FokI | GGATG | 3 cut(s) | 70, 206, 901 |
| FriOI | GRGCYC | 1 cut(s) | 668 |
| Fsp4HI | GCNGC | 7 cut(s) | 126, 225, 564, 567, 781, 954, 957 |
| FspBI | CTAG | 3 cut(s) | 572, 600, 879 |
| GlaI | GCGC | 2 cut(s) | 357, 570 |
| GluI | GCNGC | 7 cut(s) | 126, 225, 564, 567, 781, 954, 957 |
| HaeII | RGCGCY | 1 cut(s) | 572 |
| HaeIII | GGCC | 2 cut(s) | 128, 956 |
| HapII | CCGG | 4 cut(s) | 104, 143, 554, 1031 |
| HhaI | GCGC | 2 cut(s) | 358, 571 |
| Hin1II | CATG | 4 cut(s) | 800, 977, 991, 1009 |
| Hin6I | GCGC | 2 cut(s) | 356, 569 |
| HinP1I | GCGC | 2 cut(s) | 356, 569 |
| HinfI | GANTC | 4 cut(s) | 4, 250, 364, 905 |
| HpaII | CCGG | 4 cut(s) | 104, 143, 554, 1031 |
| HphI | GGTGA | 3 cut(s) | 304, 692, 900 |
| Hpy166II | GTNNAC | 3 cut(s) | 336, 577, 697 |
| Hpy188I | TCNGA | 1 cut(s) | 59 |
| Hpy188III | TCNNGA | 5 cut(s) | 328, 368, 593, 762, 940 |
| Hpy8I | GTNNAC | 3 cut(s) | 336, 577, 697 |
| Hpy99I | CGWCG | 1 cut(s) | 374 |
| HpyAV | CCTTC | 1 cut(s) | 885 |
| HpyCH4III | ACNGT | 2 cut(s) | 121, 491 |
| HpyCH4IV | ACGT | 2 cut(s) | 99, 332 |
| HpyCH4V | TGCA | 6 cut(s) | 71, 83, 453, 541, 768, 796 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 353, 765, 1015 |
| HpyF3I | CTNAG | 2 cut(s) | 56, 131 |
| HpySE526I | ACGT | 2 cut(s) | 99, 332 |
| Hsp92II | CATG | 4 cut(s) | 800, 977, 991, 1009 |
| HspAI | GCGC | 2 cut(s) | 356, 569 |
| KroI | GCCGGC | 1 cut(s) | 142 |
| KroNI | GCCGGC | 1 cut(s) | 144 |
| Ksp22I | TGATCA | 1 cut(s) | 964 |
| KspI | CCGCGG | 1 cut(s) | 486 |
| Kzo9I | GATC | 3 cut(s) | 378, 603, 964 |
| LmnI | GCTCC | 2 cut(s) | 556, 673 |
| Lsp1109I | GCAGC | 2 cut(s) | 211, 578 |
| LweI | GCATC | 5 cut(s) | 58, 58, 92, 334, 755 |
| MaeI | CTAG | 3 cut(s) | 572, 600, 879 |
| MaeII | ACGT | 2 cut(s) | 99, 332 |
| MaeIII | GTNAC | 2 cut(s) | 556, 906 |
| MalI | GATC | 3 cut(s) | 380, 605, 966 |
| MbiI | CCGCTC | 1 cut(s) | 953 |
| MboI | GATC | 3 cut(s) | 378, 603, 964 |
| MhlI | GDGCHC | 1 cut(s) | 668 |
| MluCI | AATT | 6 cut(s) | 273, 323, 463, 510, 622, 931 |
| MlyI | GAGTC | 2 cut(s) | 244, 914 |
| MnlI | CCTC | 7 cut(s) | 65, 175, 196, 202, 429, 751, 796 |
| Mph1103I | ATGCAT | 1 cut(s) | 85 |
| MroNI | GCCGGC | 1 cut(s) | 142 |
| MseI | TTAA | 2 cut(s) | 260, 525 |
| MslI | CAYNNNNRTG | 2 cut(s) | 174, 1033 |
| MspA1I | CMGCKG | 2 cut(s) | 433, 485 |
| MspI | CCGG | 4 cut(s) | 104, 143, 554, 1031 |
| MspR9I | CCNGG | 3 cut(s) | 88, 105, 191 |
| Mva1269I | GAATGC | 3 cut(s) | 85, 782, 783 |
| MvaI | CCWGG | 2 cut(s) | 88, 191 |
| MvnI | CGCG | 3 cut(s) | 485, 763, 862 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 353, 765, 1015 |
| NaeI | GCCGGC | 1 cut(s) | 144 |
| NciI | CCSGG | 1 cut(s) | 105 |
| NdeI | CATATG | 1 cut(s) | 340 |
| NdeII | GATC | 3 cut(s) | 378, 603, 964 |
| NgoMIV | GCCGGC | 1 cut(s) | 142 |
| NlaIII | CATG | 4 cut(s) | 800, 977, 991, 1009 |
| NlaIV | GGNNCC | 2 cut(s) | 285, 473 |
| NmuCI | GTSAC | 2 cut(s) | 556, 906 |
| NotI | GCGGCCGC | 1 cut(s) | 954 |
| NruI | TCGCGA | 1 cut(s) | 763 |
| NsiI | ATGCAT | 1 cut(s) | 85 |
| NspI | RCATGY | 1 cut(s) | 1009 |
| OliI | CACNNNNGTG | 1 cut(s) | 1033 |
| PaqCI | CACCTGC | 1 cut(s) | 532 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 228, 366 |
| PctI | GAATGC | 3 cut(s) | 85, 782, 783 |
| PdiI | GCCGGC | 1 cut(s) | 144 |
| PfeI | GAWTC | 2 cut(s) | 4, 364 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 846 |
| PfoI | TCCNGGA | 1 cut(s) | 189 |
| PkrI | GCNGC | 7 cut(s) | 127, 226, 565, 568, 782, 955, 958 |
| PleI | GAGTC | 2 cut(s) | 244, 913 |
| PpsI | GAGTC | 2 cut(s) | 244, 913 |
| Ppu21I | YACGTR | 1 cut(s) | 100 |
| Psp124BI | GAGCTC | 1 cut(s) | 668 |
| Psp6I | CCWGG | 2 cut(s) | 86, 189 |
| PspGI | CCWGG | 2 cut(s) | 86, 189 |
| PspN4I | GGNNCC | 2 cut(s) | 285, 473 |
| PspPI | GGNCC | 5 cut(s) | 127, 187, 410, 627, 751 |
| PvuII | CAGCTG | 1 cut(s) | 433 |
| RruI | TCGCGA | 1 cut(s) | 763 |
| RsaI | GTAC | 2 cut(s) | 118, 335 |
| RsaNI | GTAC | 2 cut(s) | 117, 334 |
| RseI | CAYNNNNRTG | 2 cut(s) | 174, 1033 |
| SacI | GAGCTC | 1 cut(s) | 668 |
| SacII | CCGCGG | 1 cut(s) | 486 |
| SaqAI | TTAA | 2 cut(s) | 260, 525 |
| SatI | GCNGC | 7 cut(s) | 126, 225, 564, 567, 781, 954, 957 |
| Sau3AI | GATC | 3 cut(s) | 378, 603, 964 |
| Sau96I | GGNCC | 5 cut(s) | 127, 187, 410, 627, 751 |
| SchI | GAGTC | 2 cut(s) | 244, 914 |
| ScrFI | CCNGG | 3 cut(s) | 88, 105, 191 |
| SduI | GDGCHC | 1 cut(s) | 668 |
| SfaNI | GCATC | 5 cut(s) | 58, 58, 92, 334, 755 |
| Sfr303I | CCGCGG | 1 cut(s) | 486 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1030 |
| SgrBI | CCGCGG | 1 cut(s) | 486 |
| SinI | GGWCC | 4 cut(s) | 187, 410, 627, 751 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 174, 1033 |
| Sse9I | AATT | 6 cut(s) | 273, 323, 463, 510, 622, 931 |
| SspI | AATATT | 1 cut(s) | 449 |
| SspMI | CTAG | 3 cut(s) | 572, 600, 879 |
| SstI | GAGCTC | 1 cut(s) | 668 |
| StyD4I | CCNGG | 3 cut(s) | 86, 103, 189 |
| StyI | CCWWGG | 3 cut(s) | 279, 654, 920 |
| TaaI | ACNGT | 2 cut(s) | 121, 491 |
| TaiI | ACGT | 2 cut(s) | 102, 335 |
| TaqI | TCGA | 7 cut(s) | 11, 45, 302, 327, 369, 421, 736 |
| TaqII | GACCGA | 1 cut(s) | 664 |
| TasI | AATT | 6 cut(s) | 273, 323, 463, 510, 622, 931 |
| TauI | GCSGC | 5 cut(s) | 128, 566, 783, 956, 959 |
| TfiI | GAWTC | 2 cut(s) | 4, 364 |
| Tru1I | TTAA | 2 cut(s) | 260, 525 |
| Tru9I | TTAA | 2 cut(s) | 260, 525 |
| TseFI | GTSAC | 2 cut(s) | 556, 906 |
| TseI | GCWGC | 2 cut(s) | 224, 566 |
| Tsp45I | GTSAC | 2 cut(s) | 556, 906 |
| TspDTI | ATGAA | 5 cut(s) | 192, 809, 813, 990, 1004 |
| TspGWI | ACGGA | 1 cut(s) | 917 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 846 |
| VpaK11BI | GGWCC | 4 cut(s) | 187, 410, 627, 751 |
| XapI | RAATTY | 3 cut(s) | 273, 323, 510 |
| XceI | RCATGY | 1 cut(s) | 1009 |
| XmiI | GTMKAC | 1 cut(s) | 576 |
| XspI | CTAG | 3 cut(s) | 572, 600, 879 |
| Zsp2I | ATGCAT | 1 cut(s) | 85 |