Retrotransposon gag protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 250 |
| AccI | GTMKAC | 2 cut(s) | 109, 383 |
| AccII | CGCG | 2 cut(s) | 117, 488 |
| AciI | CCGC | 6 cut(s) | 134, 217, 234, 362, 486, 527 |
| AclWI | GGATC | 1 cut(s) | 235 |
| AcoI | YGGCCR | 1 cut(s) | 11 |
| AcsI | RAATTY | 1 cut(s) | 557 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 250, 358, 412 |
| AgsI | TTSAA | 1 cut(s) | 370 |
| AluBI | AGCT | 5 cut(s) | 28, 50, 279, 535, 601 |
| AluI | AGCT | 5 cut(s) | 28, 50, 279, 535, 601 |
| Alw26I | GTCTC | 1 cut(s) | 32 |
| AlwI | GGATC | 1 cut(s) | 235 |
| Ama87I | CYCGRG | 1 cut(s) | 167 |
| AoxI | GGCC | 3 cut(s) | 11, 90, 144 |
| ApoI | RAATTY | 1 cut(s) | 557 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 423 |
| AspS9I | GGNCC | 2 cut(s) | 91, 512 |
| AsuHPI | GGTGA | 1 cut(s) | 508 |
| AvaI | CYCGRG | 1 cut(s) | 167 |
| AvaII | GGWCC | 1 cut(s) | 512 |
| AxyI | CCTNAGG | 1 cut(s) | 60 |
| BalI | TGGCCA | 1 cut(s) | 13 |
| BauI | CACGAG | 1 cut(s) | 568 |
| BccI | CCATC | 3 cut(s) | 82, 414, 487 |
| BceAI | ACGGC | 2 cut(s) | 293, 600 |
| BcoDI | GTCTC | 1 cut(s) | 32 |
| BfaI | CTAG | 1 cut(s) | 470 |
| BisI | GCNGC | 3 cut(s) | 235, 363, 486 |
| BlsI | GCNGC | 3 cut(s) | 236, 364, 487 |
| Bme18I | GGWCC | 1 cut(s) | 512 |
| BmeT110I | CYCGRG | 1 cut(s) | 167 |
| BmgT120I | GGNCC | 2 cut(s) | 91, 512 |
| BmiI | GGNNCC | 2 cut(s) | 207, 514 |
| BmsI | GCATC | 4 cut(s) | 145, 295, 445, 538 |
| BpuEI | CTTGAG | 1 cut(s) | 278 |
| BsaJI | CCNNGG | 3 cut(s) | 249, 324, 341 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 250, 358, 412 |
| Bse118I | RCCGGY | 1 cut(s) | 213 |
| Bse21I | CCTNAGG | 1 cut(s) | 60 |
| BseDI | CCNNGG | 3 cut(s) | 249, 324, 341 |
| BseGI | GGATG | 3 cut(s) | 93, 136, 442 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 250, 358, 412 |
| BseRI | GAGGAG | 2 cut(s) | 281, 455 |
| Bsh1236I | CGCG | 2 cut(s) | 117, 488 |
| Bsh1285I | CGRYCG | 1 cut(s) | 527 |
| BshFI | GGCC | 3 cut(s) | 13, 92, 146 |
| BsiEI | CGRYCG | 1 cut(s) | 527 |
| BsiHKCI | CYCGRG | 1 cut(s) | 167 |
| BsiSI | CCGG | 1 cut(s) | 214 |
| BslFI | GGGAC | 1 cut(s) | 443 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 250, 358, 412 |
| BsmAI | GTCTC | 1 cut(s) | 32 |
| BsmFI | GGGAC | 1 cut(s) | 443 |
| BsmI | GAATGC | 1 cut(s) | 322 |
| BsnI | GGCC | 3 cut(s) | 13, 92, 146 |
| BsoBI | CYCGRG | 1 cut(s) | 167 |
| Bsp143I | GATC | 2 cut(s) | 240, 480 |
| Bsp19I | CCATGG | 1 cut(s) | 249 |
| BspACI | CCGC | 6 cut(s) | 134, 217, 234, 362, 486, 527 |
| BspANI | GGCC | 3 cut(s) | 13, 92, 146 |
| BspFNI | CGCG | 2 cut(s) | 117, 488 |
| BspLI | GGNNCC | 2 cut(s) | 207, 514 |
| BspPI | GGATC | 1 cut(s) | 235 |
| BsrFI | RCCGGY | 1 cut(s) | 213 |
| BssAI | RCCGGY | 1 cut(s) | 213 |
| BssECI | CCNNGG | 3 cut(s) | 249, 324, 341 |
| BssMI | GATC | 2 cut(s) | 240, 480 |
| BssSI | CACGAG | 1 cut(s) | 568 |
| BssT1I | CCWWGG | 2 cut(s) | 249, 324 |
| Bst2BI | CACGAG | 1 cut(s) | 568 |
| Bst4CI | ACNGT | 2 cut(s) | 358, 381 |
| Bst6I | CTCTTC | 1 cut(s) | 441 |
| BstDEI | CTNAG | 1 cut(s) | 60 |
| BstDSI | CCRYGG | 1 cut(s) | 249 |
| BstF5I | GGATG | 3 cut(s) | 93, 136, 442 |
| BstFNI | CGCG | 2 cut(s) | 117, 488 |
| BstKTI | GATC | 2 cut(s) | 243, 483 |
| BstMAI | GTCTC | 1 cut(s) | 32 |
| BstMBI | GATC | 2 cut(s) | 240, 480 |
| BstMCI | CGRYCG | 1 cut(s) | 527 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 223 |
| BstUI | CGCG | 2 cut(s) | 117, 488 |
| Bsu36I | CCTNAGG | 1 cut(s) | 60 |
| BsuRI | GGCC | 3 cut(s) | 13, 92, 146 |
| BtgI | CCRYGG | 1 cut(s) | 249 |
| BtgZI | GCGATG | 1 cut(s) | 318 |
| BtsCI | GGATG | 3 cut(s) | 93, 136, 442 |
| Cfr10I | RCCGGY | 1 cut(s) | 213 |
| Cfr13I | GGNCC | 2 cut(s) | 91, 512 |
| CseI | GACGC | 1 cut(s) | 309 |
| CviAII | CATG | 4 cut(s) | 230, 238, 250, 461 |
| DdeI | CTNAG | 1 cut(s) | 60 |
| DpnI | GATC | 2 cut(s) | 242, 482 |
| DpnII | GATC | 2 cut(s) | 240, 480 |
| DraI | TTTAAA | 1 cut(s) | 283 |
| EaeI | YGGCCR | 1 cut(s) | 11 |
| Eam1104I | CTCTTC | 1 cut(s) | 441 |
| EarI | CTCTTC | 1 cut(s) | 441 |
| EciI | GGCGGA | 1 cut(s) | 232 |
| Eco130I | CCWWGG | 2 cut(s) | 249, 324 |
| Eco47I | GGWCC | 1 cut(s) | 512 |
| Eco81I | CCTNAGG | 1 cut(s) | 60 |
| Eco88I | CYCGRG | 1 cut(s) | 167 |
| EcoT14I | CCWWGG | 2 cut(s) | 249, 324 |
| ErhI | CCWWGG | 2 cut(s) | 249, 324 |
| FaeI | CATG | 4 cut(s) | 233, 241, 253, 464 |
| FaiI | YATR | 9 cut(s) | 231, 239, 251, 266, 334, 336, 338, 390, 462 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 53, 85 |
| FaqI | GGGAC | 1 cut(s) | 443 |
| FatI | CATG | 4 cut(s) | 229, 237, 249, 460 |
| FblI | GTMKAC | 2 cut(s) | 109, 383 |
| Fnu4HI | GCNGC | 3 cut(s) | 235, 363, 486 |
| FokI | GGATG | 3 cut(s) | 100, 123, 449 |
| Fsp4HI | GCNGC | 3 cut(s) | 235, 363, 486 |
| FspBI | CTAG | 1 cut(s) | 470 |
| GluI | GCNGC | 3 cut(s) | 235, 363, 486 |
| HaeIII | GGCC | 3 cut(s) | 13, 92, 146 |
| HapII | CCGG | 1 cut(s) | 214 |
| HgaI | GACGC | 1 cut(s) | 309 |
| Hin1II | CATG | 4 cut(s) | 233, 241, 253, 464 |
| HincII | GTYRAC | 1 cut(s) | 67 |
| HindII | GTYRAC | 1 cut(s) | 67 |
| HindIII | AAGCTT | 1 cut(s) | 26 |
| HinfI | GANTC | 3 cut(s) | 106, 160, 574 |
| HpaII | CCGG | 1 cut(s) | 214 |
| HphI | GGTGA | 1 cut(s) | 508 |
| Hpy166II | GTNNAC | 3 cut(s) | 67, 110, 384 |
| Hpy188I | TCNGA | 4 cut(s) | 35, 87, 141, 512 |
| Hpy188III | TCNNGA | 1 cut(s) | 428 |
| Hpy8I | GTNNAC | 3 cut(s) | 67, 110, 384 |
| Hpy99I | CGWCG | 1 cut(s) | 117 |
| HpyAV | CCTTC | 1 cut(s) | 136 |
| HpyCH4III | ACNGT | 2 cut(s) | 358, 381 |
| HpyCH4IV | ACGT | 1 cut(s) | 112 |
| HpyCH4V | TGCA | 2 cut(s) | 458, 555 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 223 |
| HpyF3I | CTNAG | 1 cut(s) | 60 |
| HpySE526I | ACGT | 1 cut(s) | 112 |
| Hsp92II | CATG | 4 cut(s) | 233, 241, 253, 464 |
| Kzo9I | GATC | 2 cut(s) | 240, 480 |
| LmnI | GCTCC | 1 cut(s) | 47 |
| LpnPI | CCDG | 1 cut(s) | 227 |
| LweI | GCATC | 4 cut(s) | 145, 295, 445, 538 |
| MaeI | CTAG | 1 cut(s) | 470 |
| MaeII | ACGT | 1 cut(s) | 112 |
| MalI | GATC | 2 cut(s) | 242, 482 |
| MboI | GATC | 2 cut(s) | 240, 480 |
| MboII | GAAGA | 4 cut(s) | 232, 428, 458, 502 |
| MlsI | TGGCCA | 1 cut(s) | 13 |
| MluCI | AATT | 2 cut(s) | 176, 557 |
| MluNI | TGGCCA | 1 cut(s) | 13 |
| MlyI | GAGTC | 1 cut(s) | 115 |
| MmeI | TCCRAC | 1 cut(s) | 149 |
| MnlI | CCTC | 6 cut(s) | 302, 336, 427, 433, 436, 531 |
| Mox20I | TGGCCA | 1 cut(s) | 13 |
| MroXI | GAANNNNTTC | 1 cut(s) | 423 |
| MscI | TGGCCA | 1 cut(s) | 13 |
| MseI | TTAA | 1 cut(s) | 282 |
| MslI | CAYNNNNRTG | 1 cut(s) | 86 |
| Msp20I | TGGCCA | 1 cut(s) | 13 |
| MspI | CCGG | 1 cut(s) | 214 |
| Mva1269I | GAATGC | 1 cut(s) | 322 |
| MvnI | CGCG | 2 cut(s) | 117, 488 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 223 |
| NcoI | CCATGG | 1 cut(s) | 249 |
| NdeII | GATC | 2 cut(s) | 240, 480 |
| NlaIII | CATG | 4 cut(s) | 233, 241, 253, 464 |
| NlaIV | GGNNCC | 2 cut(s) | 207, 514 |
| NmeAIII | GCCGAG | 1 cut(s) | 177 |
| PctI | GAATGC | 1 cut(s) | 322 |
| PdmI | GAANNNNTTC | 1 cut(s) | 423 |
| PfeI | GAWTC | 2 cut(s) | 160, 574 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 250 |
| PkrI | GCNGC | 3 cut(s) | 236, 364, 487 |
| PleI | GAGTC | 1 cut(s) | 114 |
| PpsI | GAGTC | 1 cut(s) | 114 |
| PspN4I | GGNNCC | 2 cut(s) | 207, 514 |
| PspPI | GGNCC | 2 cut(s) | 91, 512 |
| RseI | CAYNNNNRTG | 1 cut(s) | 86 |
| SaqAI | TTAA | 1 cut(s) | 282 |
| SatI | GCNGC | 3 cut(s) | 235, 363, 486 |
| Sau3AI | GATC | 2 cut(s) | 240, 480 |
| Sau96I | GGNCC | 2 cut(s) | 91, 512 |
| SchI | GAGTC | 1 cut(s) | 115 |
| SetI | ASST | 8 cut(s) | 30, 52, 66, 115, 281, 389, 537, 603 |
| SfaNI | GCATC | 4 cut(s) | 145, 295, 445, 538 |
| SgrAI | CRCCGGYG | 1 cut(s) | 213 |
| SinI | GGWCC | 1 cut(s) | 512 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 86 |
| SmlI | CTYRAG | 1 cut(s) | 293 |
| SmoI | CTYRAG | 1 cut(s) | 293 |
| Sse9I | AATT | 2 cut(s) | 176, 557 |
| SsiI | CCGC | 6 cut(s) | 134, 217, 234, 362, 486, 527 |
| SspMI | CTAG | 1 cut(s) | 470 |
| StyI | CCWWGG | 2 cut(s) | 249, 324 |
| TaaI | ACNGT | 2 cut(s) | 358, 381 |
| TaiI | ACGT | 1 cut(s) | 115 |
| TaqI | TCGA | 1 cut(s) | 523 |
| TasI | AATT | 2 cut(s) | 176, 557 |
| TauI | GCSGC | 3 cut(s) | 237, 365, 488 |
| TfiI | GAWTC | 2 cut(s) | 160, 574 |
| Tru1I | TTAA | 1 cut(s) | 282 |
| Tru9I | TTAA | 1 cut(s) | 282 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 250 |
| VpaK11BI | GGWCC | 1 cut(s) | 512 |
| XapI | RAATTY | 1 cut(s) | 557 |
| XmiI | GTMKAC | 2 cut(s) | 109, 383 |
| XmnI | GAANNNNTTC | 1 cut(s) | 423 |
| XspI | CTAG | 1 cut(s) | 470 |