Rmu_sc0006872.1_g000022

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006872.1
OG0000057
Physical Location & Seq
Reverse (-)
142444 .. 145475
3032 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006872.1_g000022.1.cds

Sequence Viewer

Length: 1842 bp
atgtggaacaagatatttgtaatctcatgtgtttttgcagtctcattggatcctttgttcttttacattccgatcatcgacagagacgtcaagtgccttaggttggacaacaggttgaaggccatagctctagtgttaaggtcattaacagatttattctatatgggggaccttgttctacaaattattcttatatcgaaagtgaagacatcaactaagattgttctttcccaaggaaataaaacaggtgaggaagttccttctaaaagaaagaaatcagttctggatattctggaaatagctaagagggcatttccaatagccaagaaggttttgcaattttacatcattgtagttgacattttagctgttcttccaatcccacagggcaaggagcagtcgaaaaccctaggatataaatacagggttaagcggcgaggagagggacctctctcgaatcaatcaatcccagcgattacaaagcctccccggagcaaacccccacccttgttgaaccccggtgcccgcccgccagtcctagtctcctcgcgagccgactgtcagcttcaccagatcaacccggcagctgtacttccagtcccagtctccccaggagccgactgcgagcacaaccgccactgttacttccagcgaagcaaggcgcttgaagaagaagtcaggtcactggactaccccaacgactgcacctcgcgcgataacccctaccaaaagggctacgctaactgctcaaagcataagacctccagttacagaccgcattctcgtgcggactgtcgtggtctctctgaagaacaagtgacgcaacggttctctcttcagccccgatcacccggtatgtcaactgcacaagaggagaatcgcttgaccgcgactgaaagtcagagcgtcaatgttaatcaggccagcgagcctgttgttcccgccactgtcaacactgcagtggaaggtgttgaagaagaggcttttgtttcgaagcctatcccggaaggagcaaccattgaggaaacactcgcgatcctcatggagaatgtcgacaatcatcgcaagaagatggacgctgactttgccagagaaaccgcaaaatcagaaaagctcctccgcgaaattgagcagcgtatgactctacacacggagaatacccggcagcagattacacaaacagagagtgccttgaaggcgcaagctgtaaccatcgctgctgaacaggaccagcgtcataagacaattttgaactctatagcggagcataccaagcaaactgcgtcgaatatggcagatcttcgcaaggatggggccaacttggcaactgaggtggctatgcagatagccgaattgaaccaggcgaaagatgtaatgaacaaggccttaggggatcctaatgctatccttggctctcttggccagccatccggttcaggcaagtacgtgccaccaaatcaaagcgagaagaccaaccaaaatgctggttcttcctcagctactgttgctactgctccatcgaagaacaaagaacaagccttggtcattaatggcagcaaagaaaagactgcttcatcaagcggacaggccaccaagaaacaccaagtctcgaagggtgcaggaactgcgtcagaacctatgactttcgtccagtacgacagcgacggagcagaaatggtatatcaggaattgccggggagttattatgcgctcgaccagactggcgccccgatcaaaataaccgctctgtcaaaggaagaggttacccctgcagtaactctccagcaacaagctactacccgcattgtgcatgtcggagaaggatcaacaatggtaaactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans Pkinase_Tyr cNMP_binding

Protein Analysis

613

Amino Acids

67.12

Weight (kDa)

8.83

Isoelectric Point (pI)

53.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 86
AatII GACGTC 1 cut(s) 90
AccB1I GGYRCC 2 cut(s) 521, 1724
AccBSI CCGCTC 1 cut(s) 1745
AccI GTMKAC 1 cut(s) 1053
AccII CGCG 6 cut(s) 550, 712, 714, 890, 1034, 1122
AclWI GGATC 6 cut(s) 44, 57, 1030, 1388, 1401, 1831
AcoI YGGCCR 1 cut(s) 1420
AcuI CTGAAG 2 cut(s) 821, 828
AcyI GRCGYC 2 cut(s) 87, 1725
AfaI GTAC 3 cut(s) 591, 1445, 1655
AfiI CCNNNNNNNGG 1 cut(s) 103
AgsI TTSAA 7 cut(s) 118, 514, 668, 974, 1195, 1252, 1357
AhdI GACNNNNNGTC 1 cut(s) 897
AjnI CCWGG 2 cut(s) 610, 1359
AleI CACNNNNGTG 1 cut(s) 959
AloI GAACNNNNNNTCC 2 cut(s) 41, 73
AluBI AGCT 9 cut(s) 128, 302, 368, 565, 587, 1114, 1205, 1499, 1793
AluI AGCT 9 cut(s) 128, 302, 368, 565, 587, 1114, 1205, 1499, 1793
Alw21I GWGCWC 1 cut(s) 630
Alw26I GTCTC 6 cut(s) 46, 78, 547, 610, 806, 1612
AlwI GGATC 6 cut(s) 44, 57, 1030, 1388, 1401, 1831
AlwNI CAGNNNCTG 2 cut(s) 1502, 1625
AoxI GGCC 6 cut(s) 120, 921, 1314, 1383, 1420, 1587
ApeKI GCWGC 5 cut(s) 584, 1132, 1165, 1217, 1554
ArsI GACNNNNNNTTYG 2 cut(s) 1067, 1099
AseI ATTAAT 1 cut(s) 1548
AspA2I CCTAGG 1 cut(s) 409
AspLEI GCGC 5 cut(s) 664, 714, 1201, 1711, 1727
AspS9I GGNCC 4 cut(s) 169, 446, 1228, 1314
AsuC2I CCSGG 7 cut(s) 490, 519, 581, 852, 1004, 1162, 1695
AsuHPI GGTGA 3 cut(s) 260, 560, 840
AsuII TTCGAA 1 cut(s) 992
AvaII GGWCC 3 cut(s) 169, 446, 1228
AvrII CCTAGG 1 cut(s) 409
AxyI CCTNAGG 2 cut(s) 98, 1387
BaeGI GKGCMC 1 cut(s) 526
BalI TGGCCA 1 cut(s) 1422
BamHI GGATCC 2 cut(s) 49, 1393
BanI GGYRCC 2 cut(s) 521, 1724
BauI CACGAG 1 cut(s) 783
BbsI GAAGAC 2 cut(s) 212, 1475
Bbv12I GWGCWC 1 cut(s) 630
BbvCI CCTCAGC 1 cut(s) 1495
BbvI GCAGC 5 cut(s) 596, 1144, 1177, 1204, 1566
BccI CCATC 5 cut(s) 1066, 1220, 1304, 1435, 1525
BciT130I CCWGG 2 cut(s) 612, 1361
BcnI CCSGG 7 cut(s) 490, 519, 581, 852, 1004, 1162, 1695
BcoDI GTCTC 6 cut(s) 46, 78, 547, 610, 806, 1612
BfaI CTAG 4 cut(s) 131, 410, 539, 1840
BfmI CTRYAG 3 cut(s) 957, 1257, 1770
BfoI RGCGCY 2 cut(s) 665, 1728
BglI GCCNNNNNGGC 2 cut(s) 1196, 1322
BglII AGATCT 1 cut(s) 1297
BisI GCNGC 6 cut(s) 434, 585, 1133, 1166, 1218, 1555
BlnI CCTAGG 1 cut(s) 409
BlsI GCNGC 6 cut(s) 435, 586, 1134, 1167, 1219, 1556
Bme1390I CCNGG 9 cut(s) 490, 519, 581, 612, 852, 1004, 1162, 1361, 1695
Bme18I GGWCC 3 cut(s) 169, 446, 1228
BmeRI GACNNNNNGTC 1 cut(s) 897
BmgT120I GGNCC 4 cut(s) 169, 446, 1228, 1314
BmiI GGNNCC 8 cut(s) 51, 170, 447, 523, 616, 1315, 1395, 1726
BmrFI CCNGG 9 cut(s) 490, 519, 581, 612, 852, 1004, 1162, 1361, 1695
BmrI ACTGGG 1 cut(s) 596
BmuI ACTGGG 1 cut(s) 596
BoxI GACNNNNGTC 2 cut(s) 1233, 1646
BpiI GAAGAC 2 cut(s) 212, 1475
BpmI CTGGAG 2 cut(s) 748, 1766
Bpu10I CCTNAGC 1 cut(s) 1495
Bpu14I TTCGAA 1 cut(s) 992
BpuMI CCSGG 7 cut(s) 490, 519, 581, 852, 1004, 1162, 1695
BsaAI YACGTR 1 cut(s) 1447
BsaHI GRCGYC 2 cut(s) 87, 1725
BsaI GGTCTC 1 cut(s) 806
BsaJI CCNNGG 8 cut(s) 232, 409, 488, 517, 610, 1408, 1539, 1694
BsaWI WCCGGW 1 cut(s) 1430
BsaXI ACNNNNNCTCC 2 cut(s) 469, 499
Bsc4I CCNNNNNNNGG 1 cut(s) 103
Bse1I ACTGG 7 cut(s) 533, 596, 602, 690, 765, 1651, 1726
Bse21I CCTNAGG 2 cut(s) 98, 1387
BseBI CCWGG 2 cut(s) 612, 1361
BseDI CCNNGG 8 cut(s) 232, 409, 488, 517, 610, 1408, 1539, 1694
BseGI GGATG 2 cut(s) 1315, 1427
BseLI CCNNNNNNNGG 1 cut(s) 103
BseMII CTCAG 2 cut(s) 1320, 1509
BseNI ACTGG 7 cut(s) 533, 596, 602, 690, 765, 1651, 1726
BseRI GAGGAG 4 cut(s) 453, 535, 887, 1106
BseSI GKGCMC 1 cut(s) 526
BseXI GCAGC 5 cut(s) 596, 1144, 1177, 1204, 1566
BseYI CCCAGC 1 cut(s) 469
BsgI GTGCAG 3 cut(s) 688, 849, 1638
Bsh1236I CGCG 6 cut(s) 550, 712, 714, 890, 1034, 1122
BshFI GGCC 6 cut(s) 122, 923, 1316, 1385, 1422, 1589
BshNI GGYRCC 2 cut(s) 521, 1724
BsiHKAI GWGCWC 1 cut(s) 630
BsiSI CCGG 8 cut(s) 490, 519, 581, 852, 1004, 1162, 1431, 1694
BslFI GGGAC 3 cut(s) 182, 459, 584
BslI CCNNNNNNNGG 1 cut(s) 103
BsmAI GTCTC 6 cut(s) 46, 78, 547, 610, 806, 1612
BsmBI CGTCTC 1 cut(s) 78
BsmFI GGGAC 3 cut(s) 182, 459, 584
BsmI GAATGC 1 cut(s) 778
BsnI GGCC 6 cut(s) 122, 923, 1316, 1385, 1422, 1589
Bso31I GGTCTC 1 cut(s) 806
Bsp119I TTCGAA 1 cut(s) 992
Bsp1286I GDGCHC 2 cut(s) 526, 630
Bsp143I GATC 9 cut(s) 49, 72, 573, 845, 1035, 1297, 1393, 1731, 1823
Bsp68I TCGCGA 2 cut(s) 550, 1034
BspANI GGCC 6 cut(s) 122, 923, 1316, 1385, 1422, 1589
BspCNI CTCAG 2 cut(s) 1321, 1508
BspFNI CGCG 6 cut(s) 550, 712, 714, 890, 1034, 1122
BspLI GGNNCC 8 cut(s) 51, 170, 447, 523, 616, 1315, 1395, 1726
BspMAI CTGCAG 2 cut(s) 961, 1774
BspPI GGATC 6 cut(s) 44, 57, 1030, 1388, 1401, 1831
BspT104I TTCGAA 1 cut(s) 992
BspT107I GGYRCC 2 cut(s) 521, 1724
BspTNI GGTCTC 1 cut(s) 806
BsrBI CCGCTC 1 cut(s) 1745
BsrI ACTGG 7 cut(s) 533, 596, 602, 690, 765, 1651, 1726
BssECI CCNNGG 8 cut(s) 232, 409, 488, 517, 610, 1408, 1539, 1694
BssMI GATC 9 cut(s) 49, 72, 573, 845, 1035, 1297, 1393, 1731, 1823
BssNI GRCGYC 2 cut(s) 87, 1725
BssSI CACGAG 1 cut(s) 783
BssT1I CCWWGG 4 cut(s) 232, 409, 1408, 1539
Bst2BI CACGAG 1 cut(s) 783
Bst2UI CCWGG 2 cut(s) 612, 1361
Bst4CI ACNGT 6 cut(s) 560, 641, 794, 828, 949, 1504
Bst6I CTCTTC 3 cut(s) 840, 972, 1752
BstACI GRCGYC 2 cut(s) 87, 1725
BstAPI GCANNNNNTGC 1 cut(s) 1625
BstBAI YACGTR 1 cut(s) 1447
BstBI TTCGAA 1 cut(s) 992
BstC8I GCNNGC 8 cut(s) 526, 530, 552, 626, 925, 929, 1203, 1424
BstDEI CTNAG 6 cut(s) 98, 216, 303, 1329, 1387, 1495
BstEII GGTNACC 1 cut(s) 1762
BstF5I GGATG 2 cut(s) 1315, 1427
BstFNI CGCG 6 cut(s) 550, 712, 714, 890, 1034, 1122
BstH2I RGCGCY 2 cut(s) 665, 1728
BstHHI GCGC 5 cut(s) 664, 714, 1201, 1711, 1727
BstKTI GATC 9 cut(s) 52, 75, 576, 848, 1038, 1300, 1396, 1734, 1826
BstMAI GTCTC 6 cut(s) 46, 78, 547, 610, 806, 1612
BstMBI GATC 9 cut(s) 49, 72, 573, 845, 1035, 1297, 1393, 1731, 1823
BstMWI GCNNNNNNNGC 9 cut(s) 308, 711, 1085, 1196, 1273, 1322, 1419, 1505, 1625
BstNI CCWGG 2 cut(s) 612, 1361
BstNSI RCATGY 1 cut(s) 1814
BstPAI GACNNNNGTC 2 cut(s) 1233, 1646
BstPI GGTNACC 1 cut(s) 1762
BstSCI CCNGG 9 cut(s) 488, 517, 579, 610, 850, 1002, 1160, 1359, 1693
BstSFI CTRYAG 3 cut(s) 957, 1257, 1770
BstSLI GKGCMC 1 cut(s) 526
BstUI CGCG 6 cut(s) 550, 712, 714, 890, 1034, 1122
BstV1I GCAGC 5 cut(s) 596, 1144, 1177, 1204, 1566
BstV2I GAAGAC 2 cut(s) 212, 1475
BstX2I RGATCY 3 cut(s) 49, 1297, 1393
BstXI CCANNNNNNTGG 1 cut(s) 1484
BstYI RGATCY 3 cut(s) 49, 1297, 1393
Bsu36I CCTNAGG 2 cut(s) 98, 1387
BsuRI GGCC 6 cut(s) 122, 923, 1316, 1385, 1422, 1589
BtgZI GCGATG 2 cut(s) 1046, 1198
BtsCI GGATG 2 cut(s) 1315, 1427
BtsI GCAGTG 2 cut(s) 954, 966
BtsIMutI CAGTG 5 cut(s) 637, 683, 945, 954, 966
BtuMI TCGCGA 2 cut(s) 550, 1034
Cac8I GCNNGC 8 cut(s) 526, 530, 552, 626, 925, 929, 1203, 1424
CaiI CAGNNNCTG 2 cut(s) 1502, 1625
CfoI GCGC 5 cut(s) 664, 714, 1201, 1711, 1727
Cfr13I GGNCC 4 cut(s) 169, 446, 1228, 1314
CseI GACGC 6 cut(s) 829, 895, 1085, 1223, 1272, 1617
Csp6I GTAC 3 cut(s) 590, 1444, 1654
CspCI CAANNNNNGTGG 4 cut(s) 492, 527, 1314, 1349
CviAII CATG 3 cut(s) 27, 1042, 1811
CviQI GTAC 3 cut(s) 590, 1444, 1654
DdeI CTNAG 6 cut(s) 98, 216, 303, 1329, 1387, 1495
DinI GGCGCC 1 cut(s) 1726
DpnI GATC 9 cut(s) 51, 74, 575, 847, 1037, 1299, 1395, 1733, 1825
DpnII GATC 9 cut(s) 49, 72, 573, 845, 1035, 1297, 1393, 1731, 1823
DrdI GACNNNNNNGTC 1 cut(s) 86
DriI GACNNNNNGTC 1 cut(s) 897
DseDI GACNNNNNNGTC 1 cut(s) 86
EaeI YGGCCR 1 cut(s) 1420
Eam1104I CTCTTC 3 cut(s) 840, 972, 1752
Eam1105I GACNNNNNGTC 1 cut(s) 897
EarI CTCTTC 3 cut(s) 840, 972, 1752
Eco130I CCWWGG 4 cut(s) 232, 409, 1408, 1539
Eco147I AGGCCT 1 cut(s) 1385
Eco31I GGTCTC 1 cut(s) 806
Eco47I GGWCC 3 cut(s) 169, 446, 1228
Eco57I CTGAAG 2 cut(s) 821, 828
Eco81I CCTNAGG 2 cut(s) 98, 1387
Eco91I GGTNACC 1 cut(s) 1762
EcoO109I RGGNCCY 2 cut(s) 169, 446
EcoO65I GGTNACC 1 cut(s) 1762
EcoRII CCWGG 2 cut(s) 610, 1359
EcoT14I CCWWGG 4 cut(s) 232, 409, 1408, 1539
EgeI GGCGCC 1 cut(s) 1726
EheI GGCGCC 1 cut(s) 1726
ErhI CCWWGG 4 cut(s) 232, 409, 1408, 1539
Esp3I CGTCTC 1 cut(s) 78
FaeI CATG 3 cut(s) 30, 1045, 1814
FaqI GGGAC 3 cut(s) 182, 459, 584
FatI CATG 3 cut(s) 26, 1041, 1810
FauI CCCGC 4 cut(s) 533, 537, 949, 1808
FblI GTMKAC 1 cut(s) 1053
Fnu4HI GCNGC 6 cut(s) 434, 585, 1133, 1166, 1218, 1555
FokI GGATG 2 cut(s) 1322, 1414
Fsp4HI GCNGC 6 cut(s) 434, 585, 1133, 1166, 1218, 1555
FspBI CTAG 4 cut(s) 131, 410, 539, 1840
GlaI GCGC 5 cut(s) 663, 713, 1200, 1710, 1726
GluI GCNGC 6 cut(s) 434, 585, 1133, 1166, 1218, 1555
GsaI CCCAGC 1 cut(s) 473
GsuI CTGGAG 2 cut(s) 748, 1766
HaeII RGCGCY 2 cut(s) 665, 1728
HaeIII GGCC 6 cut(s) 122, 923, 1316, 1385, 1422, 1589
HapII CCGG 8 cut(s) 490, 519, 581, 852, 1004, 1162, 1431, 1694
HgaI GACGC 6 cut(s) 829, 895, 1085, 1223, 1272, 1617
HhaI GCGC 5 cut(s) 664, 714, 1201, 1711, 1727
Hin1I GRCGYC 2 cut(s) 87, 1725
Hin1II CATG 3 cut(s) 30, 1045, 1814
Hin6I GCGC 5 cut(s) 662, 712, 1199, 1709, 1725
HinP1I GCGC 5 cut(s) 662, 712, 1199, 1709, 1725
HincII GTYRAC 4 cut(s) 358, 861, 952, 1054
HindII GTYRAC 4 cut(s) 358, 861, 952, 1054
HinfI GANTC 3 cut(s) 457, 877, 1141
HpaII CCGG 8 cut(s) 490, 519, 581, 852, 1004, 1162, 1431, 1694
HphI GGTGA 3 cut(s) 260, 560, 840
Hpy166II GTNNAC 5 cut(s) 358, 861, 952, 1054, 1837
Hpy188I TCNGA 6 cut(s) 72, 808, 903, 1108, 1633, 1817
Hpy188III TCNNGA 7 cut(s) 284, 293, 454, 549, 1033, 1609, 1685
Hpy8I GTNNAC 5 cut(s) 358, 861, 952, 1054, 1837
Hpy99I CGWCG 2 cut(s) 1288, 1667
HpyAV CCTTC 8 cut(s) 112, 270, 322, 959, 1001, 1189, 1606, 1814
HpyCH4III ACNGT 6 cut(s) 560, 641, 794, 828, 949, 1504
HpyCH4IV ACGT 2 cut(s) 87, 1446
HpyCH4V TGCA 9 cut(s) 38, 337, 705, 866, 959, 1342, 1619, 1772, 1810
HpyF10VI GCNNNNNNNGC 9 cut(s) 308, 711, 1085, 1196, 1273, 1322, 1419, 1505, 1625
HpyF3I CTNAG 6 cut(s) 98, 216, 303, 1329, 1387, 1495
HpySE526I ACGT 2 cut(s) 87, 1446
Hsp92I GRCGYC 2 cut(s) 87, 1725
Hsp92II CATG 3 cut(s) 30, 1045, 1814
HspAI GCGC 5 cut(s) 662, 712, 1199, 1709, 1725
KasI GGCGCC 1 cut(s) 1724
Kzo9I GATC 9 cut(s) 49, 72, 573, 845, 1035, 1297, 1393, 1731, 1823
LmnI GCTCC 8 cut(s) 394, 492, 614, 1010, 1119, 1264, 1519, 1667
Lsp1109I GCAGC 5 cut(s) 596, 1144, 1177, 1204, 1566
MaeI CTAG 4 cut(s) 131, 410, 539, 1840
MaeII ACGT 2 cut(s) 87, 1446
MaeIII GTNAC 7 cut(s) 641, 681, 767, 817, 1207, 1762, 1774
MalI GATC 9 cut(s) 51, 74, 575, 847, 1037, 1299, 1395, 1733, 1825
MbiI CCGCTC 1 cut(s) 1745
MboI GATC 9 cut(s) 49, 72, 573, 845, 1035, 1297, 1393, 1731, 1823
MflI RGATCY 3 cut(s) 49, 1297, 1393
MhlI GDGCHC 2 cut(s) 526, 630
MlsI TGGCCA 1 cut(s) 1422
MluCI AATT 6 cut(s) 183, 338, 1125, 1245, 1352, 1688
MluNI TGGCCA 1 cut(s) 1422
Mly113I GGCGCC 1 cut(s) 1725
MlyI GAGTC 1 cut(s) 1135
MmeI TCCRAC 2 cut(s) 84, 1795
Mox20I TGGCCA 1 cut(s) 1422
MscI TGGCCA 1 cut(s) 1422
MseI TTAA 5 cut(s) 137, 146, 429, 915, 1548
MslI CAYNNNNRTG 2 cut(s) 783, 959
Msp20I TGGCCA 1 cut(s) 1422
MspA1I CMGCKG 1 cut(s) 587
MspI CCGG 8 cut(s) 490, 519, 581, 852, 1004, 1162, 1431, 1694
MspR9I CCNGG 9 cut(s) 490, 519, 581, 612, 852, 1004, 1162, 1361, 1695
Mva1269I GAATGC 1 cut(s) 778
MvaI CCWGG 2 cut(s) 612, 1361
MvnI CGCG 6 cut(s) 550, 712, 714, 890, 1034, 1122
MwoI GCNNNNNNNGC 9 cut(s) 308, 711, 1085, 1196, 1273, 1322, 1419, 1505, 1625
NarI GGCGCC 1 cut(s) 1725
NciI CCSGG 7 cut(s) 490, 519, 581, 852, 1004, 1162, 1695
NdeII GATC 9 cut(s) 49, 72, 573, 845, 1035, 1297, 1393, 1731, 1823
NlaIII CATG 3 cut(s) 30, 1045, 1814
NlaIV GGNNCC 8 cut(s) 51, 170, 447, 523, 616, 1315, 1395, 1726
NmuCI GTSAC 2 cut(s) 681, 817
NruI TCGCGA 2 cut(s) 550, 1034
NspI RCATGY 1 cut(s) 1814
NspV TTCGAA 1 cut(s) 992
OliI CACNNNNGTG 1 cut(s) 959
PceI AGGCCT 1 cut(s) 1385
PcsI WCGNNNNNNNCGW 2 cut(s) 84, 1653
PctI GAATGC 1 cut(s) 778
PfeI GAWTC 2 cut(s) 457, 877
PfoI TCCNGGA 1 cut(s) 1002
PkrI GCNGC 6 cut(s) 435, 586, 1134, 1167, 1219, 1556
PleI GAGTC 1 cut(s) 1135
PluTI GGCGCC 1 cut(s) 1728
PpsI GAGTC 1 cut(s) 1135
Ppu21I YACGTR 1 cut(s) 1447
PpuMI RGGWCCY 2 cut(s) 169, 446
PshAI GACNNNNGTC 2 cut(s) 1233, 1646
PshBI ATTAAT 1 cut(s) 1548
Psp5II RGGWCCY 2 cut(s) 169, 446
Psp6I CCWGG 2 cut(s) 610, 1359
PspEI GGTNACC 1 cut(s) 1762
PspFI CCCAGC 1 cut(s) 469
PspGI CCWGG 2 cut(s) 610, 1359
PspN4I GGNNCC 8 cut(s) 51, 170, 447, 523, 616, 1315, 1395, 1726
PspPI GGNCC 4 cut(s) 169, 446, 1228, 1314
PspPPI RGGWCCY 2 cut(s) 169, 446
PstI CTGCAG 2 cut(s) 961, 1774
PstNI CAGNNNCTG 2 cut(s) 1502, 1625
PsuI RGATCY 3 cut(s) 49, 1297, 1393
PvuII CAGCTG 1 cut(s) 587
RruI TCGCGA 2 cut(s) 550, 1034
RsaI GTAC 3 cut(s) 591, 1445, 1655
RsaNI GTAC 3 cut(s) 590, 1444, 1654
RseI CAYNNNNRTG 2 cut(s) 783, 959
SalI GTCGAC 1 cut(s) 1052
SaqAI TTAA 5 cut(s) 137, 146, 429, 915, 1548
SatI GCNGC 6 cut(s) 434, 585, 1133, 1166, 1218, 1555
Sau3AI GATC 9 cut(s) 49, 72, 573, 845, 1035, 1297, 1393, 1731, 1823
Sau96I GGNCC 4 cut(s) 169, 446, 1228, 1314
SchI GAGTC 1 cut(s) 1135
ScrFI CCNGG 9 cut(s) 490, 519, 581, 612, 852, 1004, 1162, 1361, 1695
SduI GDGCHC 2 cut(s) 526, 630
SfcI CTRYAG 3 cut(s) 957, 1257, 1770
SfoI GGCGCC 1 cut(s) 1726
SfuI TTCGAA 1 cut(s) 992
SinI GGWCC 3 cut(s) 169, 446, 1228
SmiMI CAYNNNNRTG 2 cut(s) 783, 959
Sse9I AATT 6 cut(s) 183, 338, 1125, 1245, 1352, 1688
SseBI AGGCCT 1 cut(s) 1385
SspDI GGCGCC 1 cut(s) 1724
SspMI CTAG 4 cut(s) 131, 410, 539, 1840
StuI AGGCCT 1 cut(s) 1385
StyD4I CCNGG 9 cut(s) 488, 517, 579, 610, 850, 1002, 1160, 1359, 1693
StyI CCWWGG 4 cut(s) 232, 409, 1408, 1539
TaaI ACNGT 6 cut(s) 560, 641, 794, 828, 949, 1504
TaiI ACGT 2 cut(s) 90, 1449
TasI AATT 6 cut(s) 183, 338, 1125, 1245, 1352, 1688
TatI WGTACW 1 cut(s) 589
TauI GCSGC 1 cut(s) 436
TfiI GAWTC 2 cut(s) 457, 877
Tru1I TTAA 5 cut(s) 137, 146, 429, 915, 1548
Tru9I TTAA 5 cut(s) 137, 146, 429, 915, 1548
TscAI CASTG 5 cut(s) 644, 690, 952, 961, 966
TseFI GTSAC 2 cut(s) 681, 817
TseI GCWGC 5 cut(s) 584, 1132, 1165, 1217, 1554
Tsp45I GTSAC 2 cut(s) 681, 817
TspDTI ATGAA 2 cut(s) 1391, 1563
TspGWI ACGGA 2 cut(s) 1166, 1680
TspRI CASTG 5 cut(s) 644, 690, 952, 961, 966
VpaK11BI GGWCC 3 cut(s) 169, 446, 1228
VspI ATTAAT 1 cut(s) 1548
XceI RCATGY 1 cut(s) 1814
XmaJI CCTAGG 1 cut(s) 409
XmiI GTMKAC 1 cut(s) 1053
XspI CTAG 4 cut(s) 131, 410, 539, 1840
ZraI GACGTC 1 cut(s) 88
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.