transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 678 |
| Acc36I | ACCTGC | 1 cut(s) | 38 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 529 |
| AccI | GTMKAC | 1 cut(s) | 420 |
| AccII | CGCG | 3 cut(s) | 14, 216, 659 |
| AciI | CCGC | 7 cut(s) | 249, 264, 410, 500, 641, 759, 822 |
| AclWI | GGATC | 5 cut(s) | 140, 368, 491, 504, 803 |
| AcoI | YGGCCR | 3 cut(s) | 237, 738, 760 |
| AfaI | GTAC | 2 cut(s) | 235, 364 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 529, 545, 747, 828, 831 |
| AflII | CTTAAG | 1 cut(s) | 785 |
| AgsI | TTSAA | 2 cut(s) | 130, 985 |
| AjnI | CCWGG | 4 cut(s) | 456, 544, 740, 850 |
| AluBI | AGCT | 5 cut(s) | 8, 137, 290, 371, 885 |
| AluI | AGCT | 5 cut(s) | 8, 137, 290, 371, 885 |
| Alw26I | GTCTC | 1 cut(s) | 556 |
| AlwI | GGATC | 5 cut(s) | 140, 368, 491, 504, 803 |
| Ama87I | CYCGRG | 1 cut(s) | 916 |
| AoxI | GGCC | 6 cut(s) | 237, 606, 738, 760, 868, 929 |
| ApaI | GGGCCC | 1 cut(s) | 610 |
| ApeKI | GCWGC | 1 cut(s) | 314 |
| AspA2I | CCTAGG | 1 cut(s) | 602 |
| AspLEI | GCGC | 1 cut(s) | 661 |
| AspS9I | GGNCC | 4 cut(s) | 548, 606, 607, 632 |
| AsuHPI | GGTGA | 2 cut(s) | 307, 368 |
| AsuNHI | GCTAGC | 1 cut(s) | 224 |
| AvaI | CYCGRG | 1 cut(s) | 916 |
| AvaII | GGWCC | 2 cut(s) | 548, 632 |
| AvrII | CCTAGG | 1 cut(s) | 602 |
| BaeGI | GKGCMC | 1 cut(s) | 610 |
| BalI | TGGCCA | 1 cut(s) | 740 |
| BamHI | GGATCC | 1 cut(s) | 496 |
| BanII | GRGCYC | 2 cut(s) | 610, 917 |
| BbsI | GAAGAC | 2 cut(s) | 44, 356 |
| BbvI | GCAGC | 1 cut(s) | 301 |
| BccI | CCATC | 7 cut(s) | 56, 164, 328, 353, 398, 479, 611 |
| BceAI | ACGGC | 3 cut(s) | 252, 270, 955 |
| BciT130I | CCWGG | 4 cut(s) | 458, 546, 742, 852 |
| BclI | TGATCA | 1 cut(s) | 585 |
| BcoDI | GTCTC | 1 cut(s) | 556 |
| BfaI | CTAG | 4 cut(s) | 140, 183, 225, 603 |
| BfmI | CTRYAG | 2 cut(s) | 378, 445 |
| BfrI | CTTAAG | 1 cut(s) | 785 |
| BfuAI | ACCTGC | 1 cut(s) | 38 |
| BisI | GCNGC | 4 cut(s) | 264, 315, 760, 822 |
| BlnI | CCTAGG | 1 cut(s) | 602 |
| BlsI | GCNGC | 4 cut(s) | 265, 316, 761, 823 |
| Bme1390I | CCNGG | 4 cut(s) | 458, 546, 742, 852 |
| Bme18I | GGWCC | 2 cut(s) | 548, 632 |
| BmeT110I | CYCGRG | 1 cut(s) | 916 |
| BmgT120I | GGNCC | 4 cut(s) | 548, 606, 607, 632 |
| BmiI | GGNNCC | 5 cut(s) | 498, 608, 633, 820, 906 |
| BmrFI | CCNGG | 4 cut(s) | 458, 546, 742, 852 |
| BmsI | GCATC | 1 cut(s) | 275 |
| BmtI | GCTAGC | 1 cut(s) | 228 |
| BpiI | GAAGAC | 2 cut(s) | 44, 356 |
| BpmI | CTGGAG | 2 cut(s) | 351, 837 |
| BsaJI | CCNNGG | 3 cut(s) | 160, 602, 917 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 529, 545, 747, 828, 831 |
| Bse1I | ACTGG | 1 cut(s) | 358 |
| Bse3DI | GCAATG | 2 cut(s) | 761, 881 |
| BseBI | CCWGG | 4 cut(s) | 458, 546, 742, 852 |
| BseDI | CCNNGG | 3 cut(s) | 160, 602, 917 |
| BseGI | GGATG | 3 cut(s) | 67, 156, 622 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 529, 545, 747, 828, 831 |
| BseMI | GCAATG | 2 cut(s) | 761, 881 |
| BseMII | CTCAG | 3 cut(s) | 404, 882, 955 |
| BseNI | ACTGG | 1 cut(s) | 358 |
| BseRI | GAGGAG | 2 cut(s) | 531, 593 |
| BseSI | GKGCMC | 1 cut(s) | 610 |
| BseXI | GCAGC | 1 cut(s) | 301 |
| BsgI | GTGCAG | 1 cut(s) | 811 |
| Bsh1236I | CGCG | 3 cut(s) | 14, 216, 659 |
| BshFI | GGCC | 6 cut(s) | 239, 608, 740, 762, 870, 931 |
| BsiHKCI | CYCGRG | 1 cut(s) | 916 |
| BslFI | GGGAC | 2 cut(s) | 645, 933 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 529, 545, 747, 828, 831 |
| BsmAI | GTCTC | 1 cut(s) | 556 |
| BsmBI | CGTCTC | 1 cut(s) | 556 |
| BsmFI | GGGAC | 2 cut(s) | 645, 933 |
| BsnI | GGCC | 6 cut(s) | 239, 608, 740, 762, 870, 931 |
| BsoBI | CYCGRG | 1 cut(s) | 916 |
| Bsp120I | GGGCCC | 1 cut(s) | 606 |
| Bsp1286I | GDGCHC | 2 cut(s) | 610, 917 |
| Bsp143I | GATC | 5 cut(s) | 145, 373, 496, 585, 795 |
| Bsp68I | TCGCGA | 2 cut(s) | 14, 216 |
| BspACI | CCGC | 7 cut(s) | 249, 264, 410, 500, 641, 759, 822 |
| BspANI | GGCC | 6 cut(s) | 239, 608, 740, 762, 870, 931 |
| BspCNI | CTCAG | 3 cut(s) | 403, 883, 954 |
| BspFNI | CGCG | 3 cut(s) | 14, 216, 659 |
| BspLI | GGNNCC | 5 cut(s) | 498, 608, 633, 820, 906 |
| BspMI | ACCTGC | 1 cut(s) | 38 |
| BspOI | GCTAGC | 1 cut(s) | 228 |
| BspPI | GGATC | 5 cut(s) | 140, 368, 491, 504, 803 |
| BspTI | CTTAAG | 1 cut(s) | 785 |
| BsrDI | GCAATG | 2 cut(s) | 761, 881 |
| BsrI | ACTGG | 1 cut(s) | 358 |
| BssECI | CCNNGG | 3 cut(s) | 160, 602, 917 |
| BssMI | GATC | 5 cut(s) | 145, 373, 496, 585, 795 |
| BssT1I | CCWWGG | 1 cut(s) | 602 |
| Bst2UI | CCWGG | 4 cut(s) | 458, 546, 742, 852 |
| Bst4CI | ACNGT | 2 cut(s) | 484, 727 |
| BstAFI | CTTAAG | 1 cut(s) | 785 |
| BstC8I | GCNNGC | 8 cut(s) | 16, 214, 226, 463, 520, 594, 657, 872 |
| BstDEI | CTNAG | 3 cut(s) | 390, 891, 941 |
| BstF5I | GGATG | 3 cut(s) | 67, 156, 622 |
| BstFNI | CGCG | 3 cut(s) | 14, 216, 659 |
| BstHHI | GCGC | 1 cut(s) | 661 |
| BstKTI | GATC | 5 cut(s) | 148, 376, 499, 588, 798 |
| BstMAI | GTCTC | 1 cut(s) | 556 |
| BstMBI | GATC | 5 cut(s) | 145, 373, 496, 585, 795 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 263, 323 |
| BstNI | CCWGG | 4 cut(s) | 458, 546, 742, 852 |
| BstSCI | CCNGG | 4 cut(s) | 456, 544, 740, 850 |
| BstSFI | CTRYAG | 2 cut(s) | 378, 445 |
| BstSLI | GKGCMC | 1 cut(s) | 610 |
| BstUI | CGCG | 3 cut(s) | 14, 216, 659 |
| BstV1I | GCAGC | 1 cut(s) | 301 |
| BstV2I | GAAGAC | 2 cut(s) | 44, 356 |
| BstX2I | RGATCY | 3 cut(s) | 145, 496, 795 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 353, 617, 858 |
| BstYI | RGATCY | 3 cut(s) | 145, 496, 795 |
| BsuRI | GGCC | 6 cut(s) | 239, 608, 740, 762, 870, 931 |
| BtgZI | GCGATG | 1 cut(s) | 417 |
| BtsCI | GGATG | 3 cut(s) | 67, 156, 622 |
| BtsIMutI | CAGTG | 1 cut(s) | 489 |
| BtuMI | TCGCGA | 2 cut(s) | 14, 216 |
| BveI | ACCTGC | 1 cut(s) | 38 |
| Cac8I | GCNNGC | 8 cut(s) | 16, 214, 226, 463, 520, 594, 657, 872 |
| CfoI | GCGC | 1 cut(s) | 661 |
| Cfr13I | GGNCC | 4 cut(s) | 548, 606, 607, 632 |
| CseI | GACGC | 1 cut(s) | 24 |
| Csp6I | GTAC | 2 cut(s) | 234, 363 |
| CviAII | CATG | 2 cut(s) | 91, 425 |
| CviQI | GTAC | 2 cut(s) | 234, 363 |
| DdeI | CTNAG | 3 cut(s) | 390, 891, 941 |
| DpnI | GATC | 5 cut(s) | 147, 375, 498, 587, 797 |
| DpnII | GATC | 5 cut(s) | 145, 373, 496, 585, 795 |
| EaeI | YGGCCR | 3 cut(s) | 237, 738, 760 |
| EciI | GGCGGA | 2 cut(s) | 425, 489 |
| Eco130I | CCWWGG | 1 cut(s) | 602 |
| Eco24I | GRGCYC | 2 cut(s) | 610, 917 |
| Eco47I | GGWCC | 2 cut(s) | 548, 632 |
| Eco88I | CYCGRG | 1 cut(s) | 916 |
| EcoO109I | RGGNCCY | 2 cut(s) | 606, 632 |
| EcoRII | CCWGG | 4 cut(s) | 456, 544, 740, 850 |
| EcoT14I | CCWWGG | 1 cut(s) | 602 |
| EcoT38I | GRGCYC | 2 cut(s) | 610, 917 |
| ErhI | CCWWGG | 1 cut(s) | 602 |
| Esp3I | CGTCTC | 1 cut(s) | 556 |
| FaeI | CATG | 2 cut(s) | 94, 428 |
| FaqI | GGGAC | 2 cut(s) | 645, 933 |
| FatI | CATG | 2 cut(s) | 90, 424 |
| FauI | CCCGC | 2 cut(s) | 256, 648 |
| FbaI | TGATCA | 1 cut(s) | 585 |
| FblI | GTMKAC | 1 cut(s) | 420 |
| Fnu4HI | GCNGC | 4 cut(s) | 264, 315, 760, 822 |
| FokI | GGATG | 3 cut(s) | 74, 143, 629 |
| FriOI | GRGCYC | 2 cut(s) | 610, 917 |
| Fsp4HI | GCNGC | 4 cut(s) | 264, 315, 760, 822 |
| FspBI | CTAG | 4 cut(s) | 140, 183, 225, 603 |
| GlaI | GCGC | 1 cut(s) | 660 |
| GluI | GCNGC | 4 cut(s) | 264, 315, 760, 822 |
| GsuI | CTGGAG | 2 cut(s) | 351, 837 |
| HaeIII | GGCC | 6 cut(s) | 239, 608, 740, 762, 870, 931 |
| HgaI | GACGC | 1 cut(s) | 24 |
| HhaI | GCGC | 1 cut(s) | 661 |
| Hin1II | CATG | 2 cut(s) | 94, 428 |
| Hin6I | GCGC | 1 cut(s) | 659 |
| HinP1I | GCGC | 1 cut(s) | 659 |
| HinfI | GANTC | 2 cut(s) | 535, 964 |
| HphI | GGTGA | 2 cut(s) | 307, 368 |
| Hpy166II | GTNNAC | 2 cut(s) | 387, 421 |
| Hpy188I | TCNGA | 4 cut(s) | 40, 848, 892, 944 |
| Hpy188III | TCNNGA | 5 cut(s) | 13, 215, 475, 551, 816 |
| Hpy8I | GTNNAC | 2 cut(s) | 387, 421 |
| HpyAV | CCTTC | 1 cut(s) | 214 |
| HpyCH4III | ACNGT | 2 cut(s) | 484, 727 |
| HpyCH4IV | ACGT | 2 cut(s) | 565, 857 |
| HpyCH4V | TGCA | 4 cut(s) | 94, 754, 792, 874 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 263, 323 |
| HpyF3I | CTNAG | 3 cut(s) | 390, 891, 941 |
| HpySE526I | ACGT | 2 cut(s) | 565, 857 |
| Hsp92II | CATG | 2 cut(s) | 94, 428 |
| HspAI | GCGC | 1 cut(s) | 659 |
| Ksp22I | TGATCA | 1 cut(s) | 585 |
| Kzo9I | GATC | 5 cut(s) | 145, 373, 496, 585, 795 |
| LmnI | GCTCC | 3 cut(s) | 322, 818, 904 |
| Lsp1109I | GCAGC | 1 cut(s) | 301 |
| LweI | GCATC | 1 cut(s) | 275 |
| MaeI | CTAG | 4 cut(s) | 140, 183, 225, 603 |
| MaeII | ACGT | 2 cut(s) | 565, 857 |
| MaeIII | GTNAC | 2 cut(s) | 305, 727 |
| MalI | GATC | 5 cut(s) | 147, 375, 498, 587, 797 |
| MboI | GATC | 5 cut(s) | 145, 373, 496, 585, 795 |
| MboII | GAAGA | 3 cut(s) | 44, 361, 973 |
| MflI | RGATCY | 3 cut(s) | 145, 496, 795 |
| MhlI | GDGCHC | 2 cut(s) | 610, 917 |
| MlsI | TGGCCA | 1 cut(s) | 740 |
| MluCI | AATT | 3 cut(s) | 104, 439, 924 |
| MluNI | TGGCCA | 1 cut(s) | 740 |
| MlyI | GAGTC | 1 cut(s) | 973 |
| MmeI | TCCRAC | 1 cut(s) | 871 |
| Mox20I | TGGCCA | 1 cut(s) | 740 |
| MscI | TGGCCA | 1 cut(s) | 740 |
| MseI | TTAA | 2 cut(s) | 107, 786 |
| MslI | CAYNNNNRTG | 1 cut(s) | 60 |
| Msp20I | TGGCCA | 1 cut(s) | 740 |
| MspA1I | CMGCKG | 1 cut(s) | 371 |
| MspCI | CTTAAG | 1 cut(s) | 785 |
| MspR9I | CCNGG | 4 cut(s) | 458, 546, 742, 852 |
| MvaI | CCWGG | 4 cut(s) | 458, 546, 742, 852 |
| MvnI | CGCG | 3 cut(s) | 14, 216, 659 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 263, 323 |
| NdeII | GATC | 5 cut(s) | 145, 373, 496, 585, 795 |
| NheI | GCTAGC | 1 cut(s) | 224 |
| NlaIII | CATG | 2 cut(s) | 94, 428 |
| NlaIV | GGNNCC | 5 cut(s) | 498, 608, 633, 820, 906 |
| NmeAIII | GCCGAG | 1 cut(s) | 141 |
| NruI | TCGCGA | 2 cut(s) | 14, 216 |
| PfeI | GAWTC | 1 cut(s) | 535 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 529 |
| PkrI | GCNGC | 4 cut(s) | 265, 316, 761, 823 |
| PleI | GAGTC | 1 cut(s) | 972 |
| PpsI | GAGTC | 1 cut(s) | 972 |
| PpuMI | RGGWCCY | 1 cut(s) | 632 |
| PsiI | TTATAA | 1 cut(s) | 678 |
| Psp5II | RGGWCCY | 1 cut(s) | 632 |
| Psp6I | CCWGG | 4 cut(s) | 456, 544, 740, 850 |
| PspGI | CCWGG | 4 cut(s) | 456, 544, 740, 850 |
| PspN4I | GGNNCC | 5 cut(s) | 498, 608, 633, 820, 906 |
| PspOMI | GGGCCC | 1 cut(s) | 606 |
| PspPI | GGNCC | 4 cut(s) | 548, 606, 607, 632 |
| PspPPI | RGGWCCY | 1 cut(s) | 632 |
| PsuI | RGATCY | 3 cut(s) | 145, 496, 795 |
| PvuII | CAGCTG | 1 cut(s) | 371 |
| RruI | TCGCGA | 2 cut(s) | 14, 216 |
| RsaI | GTAC | 2 cut(s) | 235, 364 |
| RsaNI | GTAC | 2 cut(s) | 234, 363 |
| RseI | CAYNNNNRTG | 1 cut(s) | 60 |
| SaqAI | TTAA | 2 cut(s) | 107, 786 |
| SatI | GCNGC | 4 cut(s) | 264, 315, 760, 822 |
| Sau3AI | GATC | 5 cut(s) | 145, 373, 496, 585, 795 |
| Sau96I | GGNCC | 4 cut(s) | 548, 606, 607, 632 |
| SchI | GAGTC | 1 cut(s) | 973 |
| ScrFI | CCNGG | 4 cut(s) | 458, 546, 742, 852 |
| SduI | GDGCHC | 2 cut(s) | 610, 917 |
| SfaNI | GCATC | 1 cut(s) | 275 |
| SfcI | CTRYAG | 2 cut(s) | 378, 445 |
| SinI | GGWCC | 2 cut(s) | 548, 632 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 60 |
| SmlI | CTYRAG | 1 cut(s) | 785 |
| SmoI | CTYRAG | 1 cut(s) | 785 |
| Sse9I | AATT | 3 cut(s) | 104, 439, 924 |
| SsiI | CCGC | 7 cut(s) | 249, 264, 410, 500, 641, 759, 822 |
| SspMI | CTAG | 4 cut(s) | 140, 183, 225, 603 |
| StyD4I | CCNGG | 4 cut(s) | 456, 544, 740, 850 |
| StyI | CCWWGG | 1 cut(s) | 602 |
| TaaI | ACNGT | 2 cut(s) | 484, 727 |
| TaiI | ACGT | 2 cut(s) | 568, 860 |
| TasI | AATT | 3 cut(s) | 104, 439, 924 |
| TauI | GCSGC | 3 cut(s) | 266, 762, 824 |
| TfiI | GAWTC | 1 cut(s) | 535 |
| Tru1I | TTAA | 2 cut(s) | 107, 786 |
| Tru9I | TTAA | 2 cut(s) | 107, 786 |
| TscAI | CASTG | 1 cut(s) | 489 |
| TseI | GCWGC | 1 cut(s) | 314 |
| TspDTI | ATGAA | 2 cut(s) | 17, 441 |
| TspRI | CASTG | 1 cut(s) | 489 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 529 |
| Vha464I | CTTAAG | 1 cut(s) | 785 |
| VpaK11BI | GGWCC | 2 cut(s) | 548, 632 |
| XmaJI | CCTAGG | 1 cut(s) | 602 |
| XmiI | GTMKAC | 1 cut(s) | 420 |
| XspI | CTAG | 4 cut(s) | 140, 183, 225, 603 |