Retrotransposon gag protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1059 |
| AarI | CACCTGC | 1 cut(s) | 620 |
| Acc36I | ACCTGC | 1 cut(s) | 620 |
| AccB1I | GGYRCC | 1 cut(s) | 910 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 907 |
| AccII | CGCG | 1 cut(s) | 1106 |
| AciI | CCGC | 4 cut(s) | 33, 1025, 1106, 1254 |
| AclI | AACGTT | 1 cut(s) | 1280 |
| AclWI | GGATC | 7 cut(s) | 359, 447, 460, 492, 515, 685, 1243 |
| AcoI | YGGCCR | 2 cut(s) | 547, 783 |
| AcsI | RAATTY | 2 cut(s) | 49, 134 |
| AcuI | CTGAAG | 1 cut(s) | 212 |
| AcyI | GRCGYC | 1 cut(s) | 911 |
| AdeI | CACNNNGTG | 1 cut(s) | 42 |
| AfaI | GTAC | 3 cut(s) | 377, 1134, 1186 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 70, 629, 715, 907, 1086, 1212 |
| AflIII | ACRYGT | 1 cut(s) | 1299 |
| AgeI | ACCGGT | 1 cut(s) | 557 |
| AgsI | TTSAA | 3 cut(s) | 505, 724, 1086 |
| AjnI | CCWGG | 3 cut(s) | 523, 669, 750 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 464, 496 |
| Alw26I | GTCTC | 1 cut(s) | 403 |
| AlwI | GGATC | 7 cut(s) | 359, 447, 460, 492, 515, 685, 1243 |
| Ama87I | CYCGRG | 1 cut(s) | 291 |
| AoxI | GGCC | 6 cut(s) | 489, 547, 666, 783, 1013, 1250 |
| ApeKI | GCWGC | 7 cut(s) | 92, 304, 382, 434, 603, 606, 863 |
| ApoI | RAATTY | 2 cut(s) | 49, 134 |
| AsiGI | ACCGGT | 1 cut(s) | 557 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1268 |
| AspA2I | CCTAGG | 1 cut(s) | 1049 |
| AspLEI | GCGC | 3 cut(s) | 542, 913, 1106 |
| AspS9I | GGNCC | 4 cut(s) | 667, 1013, 1141, 1251 |
| AsuHPI | GGTGA | 1 cut(s) | 17 |
| AsuNHI | GCTAGC | 1 cut(s) | 223 |
| AvaI | CYCGRG | 1 cut(s) | 291 |
| AvaII | GGWCC | 1 cut(s) | 1141 |
| AvrII | CCTAGG | 1 cut(s) | 1049 |
| AxyI | CCTNAGG | 1 cut(s) | 69 |
| BalI | TGGCCA | 2 cut(s) | 549, 785 |
| BamHI | GGATCC | 1 cut(s) | 452 |
| BanI | GGYRCC | 1 cut(s) | 910 |
| BauI | CACGAG | 1 cut(s) | 827 |
| BbsI | GAAGAC | 1 cut(s) | 515 |
| BbvI | GCAGC | 7 cut(s) | 79, 316, 394, 446, 615, 618, 850 |
| BccI | CCATC | 4 cut(s) | 68, 341, 443, 652 |
| BciT130I | CCWGG | 3 cut(s) | 525, 671, 752 |
| BciVI | GTATCC | 1 cut(s) | 1087 |
| BclI | TGATCA | 1 cut(s) | 868 |
| BcoDI | GTCTC | 1 cut(s) | 403 |
| BfaI | CTAG | 5 cut(s) | 155, 224, 927, 1050, 1122 |
| BfmI | CTRYAG | 2 cut(s) | 513, 627 |
| BfoI | RGCGCY | 2 cut(s) | 543, 914 |
| BfuAI | ACCTGC | 1 cut(s) | 620 |
| BfuI | GTATCC | 1 cut(s) | 1087 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 296 |
| BglII | AGATCT | 1 cut(s) | 1176 |
| BisI | GCNGC | 8 cut(s) | 93, 305, 383, 435, 604, 607, 864, 1107 |
| BlnI | CCTAGG | 1 cut(s) | 1049 |
| BlpI | GCTNAGC | 1 cut(s) | 300 |
| BlsI | GCNGC | 8 cut(s) | 94, 306, 384, 436, 605, 608, 865, 1108 |
| Bme1390I | CCNGG | 3 cut(s) | 525, 671, 752 |
| Bme18I | GGWCC | 1 cut(s) | 1141 |
| BmeT110I | CYCGRG | 1 cut(s) | 291 |
| BmgT120I | GGNCC | 4 cut(s) | 667, 1013, 1141, 1251 |
| BmiI | GGNNCC | 4 cut(s) | 454, 912, 1014, 1142 |
| BmrFI | CCNGG | 3 cut(s) | 525, 671, 752 |
| BmrI | ACTGGG | 1 cut(s) | 223 |
| BmsI | GCATC | 4 cut(s) | 73, 327, 586, 601 |
| BmtI | GCTAGC | 1 cut(s) | 227 |
| BmuI | ACTGGG | 1 cut(s) | 223 |
| BpiI | GAAGAC | 1 cut(s) | 515 |
| BpmI | CTGGAG | 1 cut(s) | 546 |
| Bpu10I | CCTNAGC | 1 cut(s) | 257 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 300 |
| BsaAI | YACGTR | 1 cut(s) | 1302 |
| BsaHI | GRCGYC | 1 cut(s) | 911 |
| BsaJI | CCNNGG | 4 cut(s) | 492, 669, 1049, 1257 |
| BsaWI | WCCGGW | 2 cut(s) | 557, 763 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 70, 629, 715, 907, 1086, 1212 |
| Bse118I | RCCGGY | 2 cut(s) | 557, 697 |
| Bse1I | ACTGG | 3 cut(s) | 127, 218, 1253 |
| Bse21I | CCTNAGG | 1 cut(s) | 69 |
| BseBI | CCWGG | 3 cut(s) | 525, 671, 752 |
| BseDI | CCNNGG | 4 cut(s) | 492, 669, 1049, 1257 |
| BseGI | GGATG | 3 cut(s) | 60, 577, 1003 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 70, 629, 715, 907, 1086, 1212 |
| BseMII | CTCAG | 3 cut(s) | 30, 414, 417 |
| BseNI | ACTGG | 3 cut(s) | 127, 218, 1253 |
| BseRI | GAGGAG | 2 cut(s) | 965, 974 |
| BseXI | GCAGC | 7 cut(s) | 79, 316, 394, 446, 615, 618, 850 |
| Bsh1236I | CGCG | 1 cut(s) | 1106 |
| BshFI | GGCC | 6 cut(s) | 491, 549, 668, 785, 1015, 1252 |
| BshNI | GGYRCC | 1 cut(s) | 910 |
| BshTI | ACCGGT | 1 cut(s) | 557 |
| BsiHKCI | CYCGRG | 1 cut(s) | 291 |
| BsiSI | CCGG | 3 cut(s) | 558, 698, 764 |
| BslFI | GGGAC | 1 cut(s) | 1154 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 70, 629, 715, 907, 1086, 1212 |
| BsmAI | GTCTC | 1 cut(s) | 403 |
| BsmFI | GGGAC | 1 cut(s) | 1154 |
| BsmI | GAATGC | 2 cut(s) | 292, 709 |
| BsnI | GGCC | 6 cut(s) | 491, 549, 668, 785, 1015, 1252 |
| BsoBI | CYCGRG | 1 cut(s) | 291 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 300 |
| Bsp19I | CCATGG | 1 cut(s) | 1257 |
| BspACI | CCGC | 4 cut(s) | 33, 1025, 1106, 1254 |
| BspANI | GGCC | 6 cut(s) | 491, 549, 668, 785, 1015, 1252 |
| BspCNI | CTCAG | 3 cut(s) | 31, 413, 418 |
| BspFNI | CGCG | 1 cut(s) | 1106 |
| BspLI | GGNNCC | 4 cut(s) | 454, 912, 1014, 1142 |
| BspMAI | CTGCAG | 1 cut(s) | 631 |
| BspMI | ACCTGC | 1 cut(s) | 620 |
| BspOI | GCTAGC | 1 cut(s) | 227 |
| BspPI | GGATC | 7 cut(s) | 359, 447, 460, 492, 515, 685, 1243 |
| BspT107I | GGYRCC | 1 cut(s) | 910 |
| BsrFI | RCCGGY | 2 cut(s) | 557, 697 |
| BsrI | ACTGG | 3 cut(s) | 127, 218, 1253 |
| BssAI | RCCGGY | 2 cut(s) | 557, 697 |
| BssECI | CCNNGG | 4 cut(s) | 492, 669, 1049, 1257 |
| BssNI | GRCGYC | 1 cut(s) | 911 |
| BssSI | CACGAG | 1 cut(s) | 827 |
| BssT1I | CCWWGG | 2 cut(s) | 1049, 1257 |
| Bst2BI | CACGAG | 1 cut(s) | 827 |
| Bst2UI | CCWGG | 3 cut(s) | 525, 671, 752 |
| Bst4CI | ACNGT | 2 cut(s) | 203, 514 |
| Bst6I | CTCTTC | 1 cut(s) | 1274 |
| BstACI | GRCGYC | 1 cut(s) | 911 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1033 |
| BstBAI | YACGTR | 1 cut(s) | 1302 |
| BstC8I | GCNNGC | 7 cut(s) | 33, 166, 225, 263, 601, 975, 1254 |
| BstDEI | CTNAG | 8 cut(s) | 39, 69, 257, 300, 333, 400, 426, 651 |
| BstDSI | CCRYGG | 2 cut(s) | 492, 1257 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1084 |
| BstF5I | GGATG | 3 cut(s) | 60, 577, 1003 |
| BstFNI | CGCG | 1 cut(s) | 1106 |
| BstH2I | RGCGCY | 2 cut(s) | 543, 914 |
| BstHHI | GCGC | 3 cut(s) | 542, 913, 1106 |
| BstMAI | GTCTC | 1 cut(s) | 403 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 92, 101, 296, 313, 379, 546, 872, 1033 |
| BstNI | CCWGG | 3 cut(s) | 525, 671, 752 |
| BstNSI | RCATGY | 1 cut(s) | 344 |
| BstSCI | CCNGG | 3 cut(s) | 523, 669, 750 |
| BstSFI | CTRYAG | 2 cut(s) | 513, 627 |
| BstUI | CGCG | 1 cut(s) | 1106 |
| BstV1I | GCAGC | 7 cut(s) | 79, 316, 394, 446, 615, 618, 850 |
| BstV2I | GAAGAC | 1 cut(s) | 515 |
| BstX2I | RGATCY | 4 cut(s) | 452, 520, 690, 1176 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 106 |
| BstYI | RGATCY | 4 cut(s) | 452, 520, 690, 1176 |
| Bsu36I | CCTNAGG | 1 cut(s) | 69 |
| BsuI | GTATCC | 1 cut(s) | 1087 |
| BsuRI | GGCC | 6 cut(s) | 491, 549, 668, 785, 1015, 1252 |
| BtgI | CCRYGG | 2 cut(s) | 492, 1257 |
| BtgZI | GCGATG | 1 cut(s) | 624 |
| BtsCI | GGATG | 3 cut(s) | 60, 577, 1003 |
| BtsIMutI | CAGTG | 2 cut(s) | 36, 208 |
| BveI | ACCTGC | 1 cut(s) | 620 |
| Cac8I | GCNNGC | 7 cut(s) | 33, 166, 225, 263, 601, 975, 1254 |
| CfoI | GCGC | 3 cut(s) | 542, 913, 1106 |
| Cfr10I | RCCGGY | 2 cut(s) | 557, 697 |
| Cfr13I | GGNCC | 4 cut(s) | 667, 1013, 1141, 1251 |
| Csp6I | GTAC | 3 cut(s) | 376, 1133, 1185 |
| CspAI | ACCGGT | 1 cut(s) | 557 |
| CviAII | CATG | 4 cut(s) | 341, 847, 907, 1258 |
| CviQI | GTAC | 3 cut(s) | 376, 1133, 1185 |
| DdeI | CTNAG | 8 cut(s) | 39, 69, 257, 300, 333, 400, 426, 651 |
| DinI | GGCGCC | 1 cut(s) | 912 |
| DraIII | CACNNNGTG | 1 cut(s) | 42 |
| EaeI | YGGCCR | 2 cut(s) | 547, 783 |
| Eam1104I | CTCTTC | 1 cut(s) | 1274 |
| EarI | CTCTTC | 1 cut(s) | 1274 |
| Eco130I | CCWWGG | 2 cut(s) | 1049, 1257 |
| Eco47I | GGWCC | 1 cut(s) | 1141 |
| Eco57I | CTGAAG | 1 cut(s) | 212 |
| Eco81I | CCTNAGG | 1 cut(s) | 69 |
| Eco88I | CYCGRG | 1 cut(s) | 291 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1084 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1013 |
| EcoRI | GAATTC | 2 cut(s) | 49, 134 |
| EcoRII | CCWGG | 3 cut(s) | 523, 669, 750 |
| EcoT14I | CCWWGG | 2 cut(s) | 1049, 1257 |
| EcoT22I | ATGCAT | 1 cut(s) | 342 |
| EgeI | GGCGCC | 1 cut(s) | 912 |
| EheI | GGCGCC | 1 cut(s) | 912 |
| ErhI | CCWWGG | 2 cut(s) | 1049, 1257 |
| FaeI | CATG | 4 cut(s) | 344, 850, 910, 1261 |
| FaqI | GGGAC | 1 cut(s) | 1154 |
| FatI | CATG | 4 cut(s) | 340, 846, 906, 1257 |
| FauI | CCCGC | 2 cut(s) | 40, 1261 |
| FbaI | TGATCA | 1 cut(s) | 868 |
| Fnu4HI | GCNGC | 8 cut(s) | 93, 305, 383, 435, 604, 607, 864, 1107 |
| FokI | GGATG | 3 cut(s) | 47, 564, 1010 |
| Fsp4HI | GCNGC | 8 cut(s) | 93, 305, 383, 435, 604, 607, 864, 1107 |
| FspBI | CTAG | 5 cut(s) | 155, 224, 927, 1050, 1122 |
| GlaI | GCGC | 3 cut(s) | 541, 912, 1105 |
| GluI | GCNGC | 8 cut(s) | 93, 305, 383, 435, 604, 607, 864, 1107 |
| GsuI | CTGGAG | 1 cut(s) | 546 |
| HaeII | RGCGCY | 2 cut(s) | 543, 914 |
| HaeIII | GGCC | 6 cut(s) | 491, 549, 668, 785, 1015, 1252 |
| HapII | CCGG | 3 cut(s) | 558, 698, 764 |
| HhaI | GCGC | 3 cut(s) | 542, 913, 1106 |
| Hin1I | GRCGYC | 1 cut(s) | 911 |
| Hin1II | CATG | 4 cut(s) | 344, 850, 910, 1261 |
| Hin6I | GCGC | 3 cut(s) | 540, 911, 1104 |
| HinP1I | GCGC | 3 cut(s) | 540, 911, 1104 |
| HinfI | GANTC | 2 cut(s) | 760, 1111 |
| HpaII | CCGG | 3 cut(s) | 558, 698, 764 |
| HphI | GGTGA | 1 cut(s) | 17 |
| Hpy188I | TCNGA | 3 cut(s) | 241, 427, 818 |
| Hpy188III | TCNNGA | 4 cut(s) | 155, 190, 564, 932 |
| HpyAV | CCTTC | 1 cut(s) | 831 |
| HpyCH4III | ACNGT | 2 cut(s) | 203, 514 |
| HpyCH4IV | ACGT | 3 cut(s) | 837, 1280, 1301 |
| HpyCH4V | TGCA | 7 cut(s) | 45, 340, 434, 469, 577, 629, 1173 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 92, 101, 296, 313, 379, 546, 872, 1033 |
| HpyF3I | CTNAG | 8 cut(s) | 39, 69, 257, 300, 333, 400, 426, 651 |
| HpySE526I | ACGT | 3 cut(s) | 837, 1280, 1301 |
| Hsp92I | GRCGYC | 1 cut(s) | 911 |
| Hsp92II | CATG | 4 cut(s) | 344, 850, 910, 1261 |
| HspAI | GCGC | 3 cut(s) | 540, 911, 1104 |
| KasI | GGCGCC | 1 cut(s) | 910 |
| Ksp22I | TGATCA | 1 cut(s) | 868 |
| LmnI | GCTCC | 1 cut(s) | 527 |
| Lsp1109I | GCAGC | 7 cut(s) | 79, 316, 394, 446, 615, 618, 850 |
| LweI | GCATC | 4 cut(s) | 73, 327, 586, 601 |
| MaeI | CTAG | 5 cut(s) | 155, 224, 927, 1050, 1122 |
| MaeII | ACGT | 3 cut(s) | 837, 1280, 1301 |
| MaeIII | GTNAC | 2 cut(s) | 115, 365 |
| MboII | GAAGA | 6 cut(s) | 205, 517, 520, 639, 736, 1261 |
| MflI | RGATCY | 4 cut(s) | 452, 520, 690, 1176 |
| MlsI | TGGCCA | 2 cut(s) | 549, 785 |
| MluCI | AATT | 7 cut(s) | 49, 134, 276, 478, 771, 966, 1318 |
| MluNI | TGGCCA | 2 cut(s) | 549, 785 |
| Mly113I | GGCGCC | 1 cut(s) | 911 |
| MlyI | GAGTC | 1 cut(s) | 1105 |
| MmeI | TCCRAC | 3 cut(s) | 88, 480, 841 |
| Mox20I | TGGCCA | 2 cut(s) | 549, 785 |
| Mph1103I | ATGCAT | 1 cut(s) | 342 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1268 |
| MscI | TGGCCA | 2 cut(s) | 549, 785 |
| MseI | TTAA | 1 cut(s) | 389 |
| MslI | CAYNNNNRTG | 1 cut(s) | 345 |
| Msp20I | TGGCCA | 2 cut(s) | 549, 785 |
| MspI | CCGG | 3 cut(s) | 558, 698, 764 |
| MspR9I | CCNGG | 3 cut(s) | 525, 671, 752 |
| Mva1269I | GAATGC | 2 cut(s) | 292, 709 |
| MvaI | CCWGG | 3 cut(s) | 525, 671, 752 |
| MvnI | CGCG | 1 cut(s) | 1106 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 92, 101, 296, 313, 379, 546, 872, 1033 |
| NarI | GGCGCC | 1 cut(s) | 911 |
| NcoI | CCATGG | 1 cut(s) | 1257 |
| NheI | GCTAGC | 1 cut(s) | 223 |
| NlaIII | CATG | 4 cut(s) | 344, 850, 910, 1261 |
| NlaIV | GGNNCC | 4 cut(s) | 454, 912, 1014, 1142 |
| NmuCI | GTSAC | 1 cut(s) | 115 |
| NsiI | ATGCAT | 1 cut(s) | 342 |
| NspI | RCATGY | 1 cut(s) | 344 |
| PaqCI | CACCTGC | 1 cut(s) | 620 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 834 |
| PctI | GAATGC | 2 cut(s) | 292, 709 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1268 |
| PfeI | GAWTC | 1 cut(s) | 760 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 907 |
| PfoI | TCCNGGA | 1 cut(s) | 523 |
| PinAI | ACCGGT | 1 cut(s) | 557 |
| PkrI | GCNGC | 8 cut(s) | 94, 306, 384, 436, 605, 608, 865, 1108 |
| PleI | GAGTC | 1 cut(s) | 1105 |
| PluTI | GGCGCC | 1 cut(s) | 914 |
| PpsI | GAGTC | 1 cut(s) | 1105 |
| Ppu21I | YACGTR | 1 cut(s) | 1302 |
| PsiI | TTATAA | 1 cut(s) | 1059 |
| Psp1406I | AACGTT | 1 cut(s) | 1280 |
| Psp6I | CCWGG | 3 cut(s) | 523, 669, 750 |
| PspGI | CCWGG | 3 cut(s) | 523, 669, 750 |
| PspN4I | GGNNCC | 4 cut(s) | 454, 912, 1014, 1142 |
| PspPI | GGNCC | 4 cut(s) | 667, 1013, 1141, 1251 |
| PstI | CTGCAG | 1 cut(s) | 631 |
| PsuI | RGATCY | 4 cut(s) | 452, 520, 690, 1176 |
| RsaI | GTAC | 3 cut(s) | 377, 1134, 1186 |
| RsaNI | GTAC | 3 cut(s) | 376, 1133, 1185 |
| RseI | CAYNNNNRTG | 1 cut(s) | 345 |
| SaqAI | TTAA | 1 cut(s) | 389 |
| SatI | GCNGC | 8 cut(s) | 93, 305, 383, 435, 604, 607, 864, 1107 |
| Sau96I | GGNCC | 4 cut(s) | 667, 1013, 1141, 1251 |
| SbfI | CCTGCAGG | 1 cut(s) | 631 |
| SchI | GAGTC | 1 cut(s) | 1105 |
| ScrFI | CCNGG | 3 cut(s) | 525, 671, 752 |
| SdaI | CCTGCAGG | 1 cut(s) | 631 |
| SfaNI | GCATC | 4 cut(s) | 73, 327, 586, 601 |
| SfcI | CTRYAG | 2 cut(s) | 513, 627 |
| SfoI | GGCGCC | 1 cut(s) | 912 |
| SgrAI | CRCCGGYG | 1 cut(s) | 697 |
| SinI | GGWCC | 1 cut(s) | 1141 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 345 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 631 |
| Sse9I | AATT | 7 cut(s) | 49, 134, 276, 478, 771, 966, 1318 |
| SsiI | CCGC | 4 cut(s) | 33, 1025, 1106, 1254 |
| SspDI | GGCGCC | 1 cut(s) | 910 |
| SspMI | CTAG | 5 cut(s) | 155, 224, 927, 1050, 1122 |
| StyD4I | CCNGG | 3 cut(s) | 523, 669, 750 |
| StyI | CCWWGG | 2 cut(s) | 1049, 1257 |
| TaaI | ACNGT | 2 cut(s) | 203, 514 |
| TaiI | ACGT | 3 cut(s) | 840, 1283, 1304 |
| TaqI | TCGA | 1 cut(s) | 233 |
| TasI | AATT | 7 cut(s) | 49, 134, 276, 478, 771, 966, 1318 |
| TauI | GCSGC | 1 cut(s) | 1109 |
| TfiI | GAWTC | 1 cut(s) | 760 |
| Tru1I | TTAA | 1 cut(s) | 389 |
| Tru9I | TTAA | 1 cut(s) | 389 |
| TscAI | CASTG | 2 cut(s) | 43, 208 |
| TseFI | GTSAC | 1 cut(s) | 115 |
| TseI | GCWGC | 7 cut(s) | 92, 304, 382, 434, 603, 606, 863 |
| Tsp45I | GTSAC | 1 cut(s) | 115 |
| TspDTI | ATGAA | 2 cut(s) | 24, 147 |
| TspGWI | ACGGA | 1 cut(s) | 509 |
| TspRI | CASTG | 2 cut(s) | 43, 208 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 907 |
| VpaK11BI | GGWCC | 1 cut(s) | 1141 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1084 |
| XapI | RAATTY | 2 cut(s) | 49, 134 |
| XbaI | TCTAGA | 1 cut(s) | 154 |
| XceI | RCATGY | 1 cut(s) | 344 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 103 |
| XmaJI | CCTAGG | 1 cut(s) | 1049 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1268 |
| XspI | CTAG | 5 cut(s) | 155, 224, 927, 1050, 1122 |
| Zsp2I | ATGCAT | 1 cut(s) | 342 |