Rmu_sc0011534.1_g000004

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011534.1
OG0000057
Physical Location & Seq
Forward (+)
4704 .. 7946
3243 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011534.1_g000004.1.cds

Sequence Viewer

Length: 2991 bp
atgggagttcggataactttctcaatccgatgctcttcacatgcccgacatgcagatgatactaaacaacagattgcacaatcagagaatgcagtaaaggcccatgccgcaggtatcgctagcgagcagaatcagtgccagagagaaatcatagaggctatcacgaaccaaaccaagcagaccgcgccagatatggcagatcttcgcaaggatggcgctaacttagcaaccgaggtggccatgcaaagagccgaattgaaccaagctagagaacgggagaaagtgagcagcaatatcgctacttcctccgccgccattgctgctgcaccactgaaaaataaagagcaggctctggttatcaacggcagcaaggaaaagaccacctcgccatgcggacagatcaccagacagaagcaccaggcctcgaaagttgttggaactacgtccaactctgctacattcgttcagtactacagcgatggggcagaaaacatgtaccaggaactgacaggaagttattacgggattgatctgaccagcagtccaattaagataacagccttgtcaaaggagacgcctatgccagcaatgactcttcagcaacaagctacaacacccgttgtacatgtaggagaggggccggcgacggtaaaccaagcaatacccttgcaggctactagccagattgtggcgacaccacctcctcctcctccgggtccagaatatgtgagacgtgaagaggtagaggagaagatcaggttggctaatcctagggcccagctggatggggtctatgagggtcctttcccaccgcatatcatgctcgcaccatttcccagaggctataagaatatcatattttctaccttttcagggaaagacaccgaggatgcagcaatccatttggccaggtttagggtacaatgcggccaataccagaatgatgatatcctcaaatgtagaatatttgagtccgctgtggcctatctccagcgcttccaaattcagaaagctaagctgaacatcatcctgcctgagaaagagttagtcaagctggcggtcaagggtttggagccccaccaacgaaagaagcaacatggcagcatgatccagtcaatgggagaactcatcacagaggtgggtagcttcgaacatctcctcagagagacagacgcaaggaagaatgcatccagagggacatacgtaccaagaaaacatcctaccgtagcggccctgagctaccagccggctacctatgacccttattaccatcatcacagtgaagaagtggttcaggatgacaatgaagaagaggagaatgatatcgctgcttacgaattaaccggaaagaagaatccagccctgaagcagctgaaaatttccaaggaacctgtcaagctcaagtcgatggccttcaccaaacctgaattcgcgacatatacatatgatgccaataaggcgcatgagattttggatgagatgatctccgcgaagatggtaaagaccgactttggaccttttcctcgaccagagcagttgaaagggaagaagcactgcaagtttcacaacttgtggaatcacaacactgcggactgcgtgaagctcaaagaccagattcaagtatggcttaataatggcagtttgcaggtagaagctccagtaatggcagcagcgctagtggacctggaccccttccctgacactaggatcaatatggtcgatgtgaactggaccaagcagaaccagaggagactgttcttggatttgaggacaaaggagctagctggaaagtctgccgcggatgagacaccttcaaagaaggaagctaaaccaattggtcaagcctcgcccgtggtcctatgctcgcgatgcaaagaagagtgtggcatccaagtgccgcatgaagaggtcgagcaaacatttcactttggctctctaccgcccatcaggtggacttcgtcatcgcgcaactatcaaccttctagcccgagagaaaaagaaaatatggagttaccgccctccccaaaggactccaatttgttcaagaaactgagggcggctgcggttgatcagaaacgtgaagagagtgccacgaacaagcgcaacgatgtactgaccaagccttacatcccgcttgcgccagccatcactaccaaggaaggaaagtggtacaccagagaaaaagggagggcggtggaaataagcacttccaagaagaggaaactgcagcgcaggtttggggaagccaagcgcgcgctagaggctctggaccagggcctgattaagccttcacaattagtcaaatcacctgagcagtatcaaaaggagatggaggcactagctgttaagccgttaatggctccccgtagccttaaaaaacaagcgagctcgctaacaggggcatctaagcccagtgttttttacaggattactgaggagagaataccttcgatggctcgaaaggagaactcgccgactcggcgacctcatgtcaggcgcaggttatttcgcgaagaaccagaagccaaatcttcggtatttgagagactggggggcaaggataagactattgataccttacagtggaaaccaaaaaaggtccagagcgtagtagtcgcttccccagaggtgtgcatggagagggcaccgaaaccagactccccgaagcatgatcccgtggtacaggaacaaaagcaatgtgaggtaaaaggccttatagaagaatcgttggtggaccgtttggctaaacaattcagcgaggacactcctgttgatgaacccaagcttaacctggaagatgacatggatgagacagatataactgacacatcttgcaacatggtttacgtgctccccgcgaggtatgcattaccggtcgctgctcaggactgtgtggaagctgaagaaggtaatgcgcagccgttgcagatcacatcggcaggcacgacaccagtggaagaggctgtccttcatgagacagaggatgcttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

996

Amino Acids

111.38

Weight (kDa)

8.37

Isoelectric Point (pI)

50.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2916
Acc36I ACCTGC 4 cut(s) 101, 1636, 2223, 2490
AccB1I GGYRCC 1 cut(s) 2644
AccB7I CCANNNNNTGG 3 cut(s) 688, 1117, 1950
AclWI GGATC 3 cut(s) 1102, 1715, 2666
AcoI YGGCCR 3 cut(s) 237, 906, 928
AcsI RAATTY 3 cut(s) 1002, 1377, 1427
AcuI CTGAAG 3 cut(s) 581, 1385, 2922
AcyI GRCGYC 1 cut(s) 575
AfaI GTAC 8 cut(s) 470, 497, 624, 921, 1206, 2112, 2171, 2682
AfeI AGCGCT 2 cut(s) 995, 1674
AfiI CCNNNNNNNGG 8 cut(s) 688, 713, 873, 915, 1117, 1950, 2217, 2583
AflIII ACRYGT 2 cut(s) 492, 625
AgeI ACCGGT 1 cut(s) 2872
AgsI TTSAA 5 cut(s) 259, 1540, 1619, 1815, 2044
AhdI GACNNNNNGTC 2 cut(s) 540, 2489
AjiI CACGTC 1 cut(s) 734
AjnI CCWGG 6 cut(s) 417, 498, 908, 1683, 2271, 2790
AjuI GAANNNNNNNTTGG 4 cut(s) 743, 775, 1412, 1444
AleI CACNNNNGTG 1 cut(s) 1136
Alw21I GWGCWC 2 cut(s) 2390, 2853
Alw26I GTCTC 8 cut(s) 566, 724, 1160, 1744, 1799, 2539, 2804, 2969
AlwI GGATC 3 cut(s) 1102, 1715, 2666
AlwNI CAGNNNCTG 3 cut(s) 352, 505, 2278
Ama87I CYCGRG 1 cut(s) 1987
Aor51HI AGCGCT 2 cut(s) 995, 1674
ApaI GGGCCC 1 cut(s) 778
ApoI RAATTY 3 cut(s) 1002, 1377, 1427
AsiGI ACCGGT 1 cut(s) 2872
Asp700I GAANNNNTTC 2 cut(s) 1290, 2446
AspA2I CCTAGG 1 cut(s) 770
AsuC2I CCSGG 1 cut(s) 714
AsuHPI GGTGA 3 cut(s) 394, 1408, 2298
AsuII TTCGAA 1 cut(s) 1149
AsuNHI GCTAGC 2 cut(s) 119, 1780
AvaI CYCGRG 1 cut(s) 1987
AvrII CCTAGG 1 cut(s) 770
BaeGI GKGCMC 2 cut(s) 778, 2647
BaeI ACNNNNGTAYC 2 cut(s) 1188, 1221
BalI TGGCCA 2 cut(s) 239, 908
BanI GGYRCC 1 cut(s) 2644
BanII GRGCYC 3 cut(s) 778, 1077, 2390
Bbv12I GWGCWC 2 cut(s) 2390, 2853
BceAI ACGGC 3 cut(s) 379, 2335, 2905
BcgI CGANNNNNNTGC 2 cut(s) 277, 311
BciT130I CCWGG 6 cut(s) 419, 500, 910, 1685, 2273, 2792
BclI TGATCA 1 cut(s) 2068
BcnI CCSGG 1 cut(s) 714
BcoDI GTCTC 8 cut(s) 566, 724, 1160, 1744, 1799, 2539, 2804, 2969
BfmI CTRYAG 2 cut(s) 472, 2225
BfoI RGCGCY 3 cut(s) 219, 997, 1676
BfuAI ACCTGC 4 cut(s) 101, 1636, 2223, 2490
BglI GCCNNNNNGGC 2 cut(s) 1457, 2479
BglII AGATCT 1 cut(s) 199
BlnI CCTAGG 1 cut(s) 770
BlpI GCTNAGC 1 cut(s) 1014
BmcAI AGTACT 1 cut(s) 470
Bme1390I CCNGG 7 cut(s) 419, 500, 714, 910, 1685, 2273, 2792
BmeRI GACNNNNNGTC 2 cut(s) 540, 2489
BmeT110I CYCGRG 1 cut(s) 1987
BmgBI CACGTC 1 cut(s) 734
BmiI GGNNCC 9 cut(s) 639, 717, 776, 801, 1074, 1389, 1689, 2361, 2646
BmrFI CCNGG 7 cut(s) 419, 500, 714, 910, 1685, 2273, 2792
BmrI ACTGGG 2 cut(s) 2406, 2558
BmsI GCATC 8 cut(s) 20, 880, 1196, 1438, 1859, 1896, 2411, 2974
BmtI GCTAGC 2 cut(s) 123, 1784
BmuI ACTGGG 2 cut(s) 2406, 2558
BplI GAGNNNNNCTC 2 cut(s) 1469, 1501
BpmI CTGGAG 2 cut(s) 974, 1641
Bpu10I CCTNAGC 3 cut(s) 1235, 2310, 2883
Bpu1102I GCTNAGC 1 cut(s) 1014
Bpu14I TTCGAA 1 cut(s) 1149
BpuEI CTTGAG 1 cut(s) 1385
BpuMI CCSGG 1 cut(s) 714
BsaAI YACGTR 2 cut(s) 1204, 2848
BsaHI GRCGYC 1 cut(s) 575
BsaJI CCNNGG 9 cut(s) 231, 770, 885, 1383, 1797, 1851, 2154, 2272, 2676
BsaWI WCCGGW 2 cut(s) 1343, 2872
BsaXI ACNNNNNCTCC 2 cut(s) 685, 715
Bsc4I CCNNNNNNNGG 8 cut(s) 688, 713, 873, 915, 1117, 1950, 2217, 2583
Bse118I RCCGGY 3 cut(s) 640, 1246, 2872
Bse1I ACTGG 6 cut(s) 1111, 1658, 1733, 2412, 2553, 2951
Bse3DI GCAATG 3 cut(s) 315, 594, 2702
BseBI CCWGG 6 cut(s) 419, 500, 910, 1685, 2273, 2792
BseDI CCNNGG 9 cut(s) 231, 770, 885, 1383, 1797, 1851, 2154, 2272, 2676
BseLI CCNNNNNNNGG 8 cut(s) 688, 713, 873, 915, 1117, 1950, 2217, 2583
BseMI GCAATG 3 cut(s) 315, 594, 2702
BseMII CTCAG 7 cut(s) 1026, 1174, 1226, 2042, 2301, 2424, 2897
BseNI ACTGG 6 cut(s) 1111, 1658, 1733, 2412, 2553, 2951
BsePI GCGCGC 2 cut(s) 2251, 2253
BseRI GAGGAG 8 cut(s) 693, 696, 699, 761, 1148, 1328, 1762, 2450
BseSI GKGCMC 2 cut(s) 778, 2647
BseYI CCCAGC 1 cut(s) 777
BsgI GTGCAG 1 cut(s) 309
Bsh1285I CGRYCG 1 cut(s) 2877
BshNI GGYRCC 1 cut(s) 2644
BshTI ACCGGT 1 cut(s) 2872
BsiEI CGRYCG 1 cut(s) 2877
BsiHKAI GWGCWC 2 cut(s) 2390, 2853
BsiHKCI CYCGRG 1 cut(s) 1987
BsiSI CCGG 5 cut(s) 641, 713, 1247, 1344, 2873
BslFI GGGAC 1 cut(s) 1210
BslI CCNNNNNNNGG 8 cut(s) 688, 713, 873, 915, 1117, 1950, 2217, 2583
BsmAI GTCTC 8 cut(s) 566, 724, 1160, 1744, 1799, 2539, 2804, 2969
BsmBI CGTCTC 2 cut(s) 566, 724
BsmFI GGGAC 1 cut(s) 1210
BsmI GAATGC 2 cut(s) 94, 1189
BsoBI CYCGRG 1 cut(s) 1987
Bsp119I TTCGAA 1 cut(s) 1149
Bsp120I GGGCCC 1 cut(s) 774
Bsp1286I GDGCHC 5 cut(s) 778, 1077, 2390, 2647, 2853
Bsp1407I TGTACA 1 cut(s) 622
Bsp1720I GCTNAGC 1 cut(s) 1014
Bsp68I TCGCGA 3 cut(s) 1433, 1867, 2511
BspCNI CTCAG 7 cut(s) 1027, 1173, 1227, 2043, 2302, 2425, 2896
BspHI TCATGA 1 cut(s) 2971
BspLI GGNNCC 9 cut(s) 639, 717, 776, 801, 1074, 1389, 1689, 2361, 2646
BspMAI CTGCAG 1 cut(s) 2229
BspMI ACCTGC 4 cut(s) 101, 1636, 2223, 2490
BspOI GCTAGC 2 cut(s) 123, 1784
BspPI GGATC 3 cut(s) 1102, 1715, 2666
BspQI GCTCTTC 1 cut(s) 40
BspT104I TTCGAA 1 cut(s) 1149
BspT107I GGYRCC 1 cut(s) 2644
BsrDI GCAATG 3 cut(s) 315, 594, 2702
BsrFI RCCGGY 3 cut(s) 640, 1246, 2872
BsrGI TGTACA 1 cut(s) 622
BsrI ACTGG 6 cut(s) 1111, 1658, 1733, 2412, 2553, 2951
BssAI RCCGGY 3 cut(s) 640, 1246, 2872
BssECI CCNNGG 9 cut(s) 231, 770, 885, 1383, 1797, 1851, 2154, 2272, 2676
BssHII GCGCGC 2 cut(s) 2251, 2253
BssNI GRCGYC 1 cut(s) 575
BssT1I CCWWGG 3 cut(s) 770, 1383, 2154
Bst2UI CCWGG 6 cut(s) 419, 500, 910, 1685, 2273, 2792
Bst4CI ACNGT 7 cut(s) 649, 1225, 1280, 1755, 2583, 2738, 2891
Bst6I CTCTTC 9 cut(s) 40, 600, 732, 1305, 1872, 1899, 2076, 2210, 2952
BstACI GRCGYC 1 cut(s) 575
BstAPI GCANNNNNTGC 2 cut(s) 820, 2923
BstAUI TGTACA 1 cut(s) 622
BstBAI YACGTR 2 cut(s) 1204, 2848
BstBI TTCGAA 1 cut(s) 1149
BstDSI CCRYGG 3 cut(s) 1797, 1851, 2676
BstH2I RGCGCY 3 cut(s) 219, 997, 1676
BstMAI GTCTC 8 cut(s) 566, 724, 1160, 1744, 1799, 2539, 2804, 2969
BstMCI CGRYCG 1 cut(s) 2877
BstNI CCWGG 6 cut(s) 419, 500, 910, 1685, 2273, 2792
BstNSI RCATGY 4 cut(s) 44, 53, 496, 629
BstSCI CCNGG 7 cut(s) 417, 498, 712, 908, 1683, 2271, 2790
BstSFI CTRYAG 2 cut(s) 472, 2225
BstSLI GKGCMC 2 cut(s) 778, 2647
BstSNI TACGTA 1 cut(s) 1204
BstX2I RGATCY 1 cut(s) 199
BstXI CCANNNNNNTGG 1 cut(s) 785
BstYI RGATCY 1 cut(s) 199
BtgI CCRYGG 3 cut(s) 1797, 1851, 2676
BtgZI GCGATG 3 cut(s) 492, 1882, 1947
BtrI CACGTC 1 cut(s) 734
BtsI GCAGTG 2 cut(s) 1552, 1584
BtsIMutI CAGTG 8 cut(s) 140, 329, 1285, 1552, 1584, 2419, 2588, 2958
BtuMI TCGCGA 3 cut(s) 1433, 1867, 2511
BveI ACCTGC 4 cut(s) 101, 1636, 2223, 2490
CaiI CAGNNNCTG 3 cut(s) 352, 505, 2278
CciI TCATGA 1 cut(s) 2971
Cfr10I RCCGGY 3 cut(s) 640, 1246, 2872
Cfr42I CCGCGG 1 cut(s) 1800
CseI GACGC 2 cut(s) 583, 1181
Csp6I GTAC 8 cut(s) 469, 496, 623, 920, 1205, 2111, 2170, 2681
CspAI ACCGGT 1 cut(s) 2872
CspCI CAANNNNNGTGG 2 cut(s) 216, 251
CviQI GTAC 8 cut(s) 469, 496, 623, 920, 1205, 2111, 2170, 2681
DriI GACNNNNNGTC 2 cut(s) 540, 2489
EaeI YGGCCR 3 cut(s) 237, 906, 928
Eam1104I CTCTTC 9 cut(s) 40, 600, 732, 1305, 1872, 1899, 2076, 2210, 2952
Eam1105I GACNNNNNGTC 2 cut(s) 540, 2489
EarI CTCTTC 9 cut(s) 40, 600, 732, 1305, 1872, 1899, 2076, 2210, 2952
EciI GGCGGA 1 cut(s) 298
Ecl136II GAGCTC 1 cut(s) 2388
Eco105I TACGTA 1 cut(s) 1204
Eco130I CCWWGG 3 cut(s) 770, 1383, 2154
Eco147I AGGCCT 2 cut(s) 422, 2712
Eco24I GRGCYC 3 cut(s) 778, 1077, 2390
Eco32I GATATC 2 cut(s) 949, 1324
Eco47III AGCGCT 2 cut(s) 995, 1674
Eco53kI GAGCTC 1 cut(s) 2388
Eco57I CTGAAG 3 cut(s) 581, 1385, 2922
Eco88I CYCGRG 1 cut(s) 1987
EcoICRI GAGCTC 1 cut(s) 2388
EcoO109I RGGNCCY 3 cut(s) 774, 800, 2275
EcoRI GAATTC 1 cut(s) 1427
EcoRII CCWGG 6 cut(s) 417, 498, 908, 1683, 2271, 2790
EcoRV GATATC 2 cut(s) 949, 1324
EcoT14I CCWWGG 3 cut(s) 770, 1383, 2154
EcoT22I ATGCAT 2 cut(s) 1189, 2869
EcoT38I GRGCYC 3 cut(s) 778, 1077, 2390
ErhI CCWWGG 3 cut(s) 770, 1383, 2154
Esp3I CGTCTC 2 cut(s) 566, 724
FalI AAGNNNNNCTT 4 cut(s) 1493, 1525, 1611, 1643
FaqI GGGAC 1 cut(s) 1210
FauI CCCGC 2 cut(s) 2139, 2863
FauNDI CATATG 1 cut(s) 1444
FbaI TGATCA 1 cut(s) 2068
FriOI GRGCYC 3 cut(s) 778, 1077, 2390
FspI TGCGCA 1 cut(s) 2916
GsaI CCCAGC 1 cut(s) 781
GsuI CTGGAG 2 cut(s) 974, 1641
HaeII RGCGCY 3 cut(s) 219, 997, 1676
HapII CCGG 5 cut(s) 641, 713, 1247, 1344, 2873
HgaI GACGC 2 cut(s) 583, 1181
Hin1I GRCGYC 1 cut(s) 575
HindIII AAGCTT 1 cut(s) 2783
HpaII CCGG 5 cut(s) 641, 713, 1247, 1344, 2873
HphI GGTGA 3 cut(s) 394, 1408, 2298
Hpy166II GTNNAC 7 cut(s) 652, 1681, 1726, 1953, 2172, 2734, 2845
Hpy188I TCNGA 7 cut(s) 12, 29, 85, 534, 1008, 1163, 2073
Hpy8I GTNNAC 7 cut(s) 652, 1681, 1726, 1953, 2172, 2734, 2845
Hpy99I CGWCG 1 cut(s) 649
HpyCH4III ACNGT 7 cut(s) 649, 1225, 1280, 1755, 2583, 2738, 2891
HpyCH4IV ACGT 5 cut(s) 443, 733, 1203, 2077, 2847
HpySE526I ACGT 5 cut(s) 443, 733, 1203, 2077, 2847
Hsp92I GRCGYC 1 cut(s) 575
KroI GCCGGC 2 cut(s) 640, 1246
KroNI GCCGGC 2 cut(s) 642, 1248
Ksp22I TGATCA 1 cut(s) 2068
KspI CCGCGG 1 cut(s) 1800
LguI GCTCTTC 1 cut(s) 40
LmnI GCTCC 5 cut(s) 1072, 1660, 1777, 2365, 2856
LweI GCATC 8 cut(s) 20, 880, 1196, 1438, 1859, 1896, 2411, 2974
MaeII ACGT 5 cut(s) 443, 733, 1203, 2077, 2847
MaeIII GTNAC 1 cut(s) 2010
MfeI CAATTG 1 cut(s) 1833
MflI RGATCY 1 cut(s) 199
MhlI GDGCHC 5 cut(s) 778, 1077, 2390, 2647, 2853
MlsI TGGCCA 2 cut(s) 239, 908
MluNI TGGCCA 2 cut(s) 239, 908
MlyI GAGTC 5 cut(s) 586, 980, 2024, 2470, 2651
MmeI TCCRAC 2 cut(s) 415, 471
Mox20I TGGCCA 2 cut(s) 239, 908
Mph1103I ATGCAT 2 cut(s) 1189, 2869
MroNI GCCGGC 2 cut(s) 640, 1246
MroXI GAANNNNTTC 2 cut(s) 1290, 2446
MscI TGGCCA 2 cut(s) 239, 908
MseI TTAA 8 cut(s) 549, 1340, 1629, 2283, 2346, 2354, 2373, 2787
MslI CAYNNNNRTG 4 cut(s) 54, 1136, 1278, 1892
Msp20I TGGCCA 2 cut(s) 239, 908
MspA1I CMGCKG 4 cut(s) 781, 977, 1372, 1799
MspI CCGG 5 cut(s) 641, 713, 1247, 1344, 2873
MspR9I CCNGG 7 cut(s) 419, 500, 714, 910, 1685, 2273, 2792
MunI CAATTG 1 cut(s) 1833
Mva1269I GAATGC 2 cut(s) 94, 1189
MvaI CCWGG 6 cut(s) 419, 500, 910, 1685, 2273, 2792
NaeI GCCGGC 2 cut(s) 642, 1248
NciI CCSGG 1 cut(s) 714
NdeI CATATG 1 cut(s) 1444
NgoMIV GCCGGC 2 cut(s) 640, 1246
NheI GCTAGC 2 cut(s) 119, 1780
NlaIV GGNNCC 9 cut(s) 639, 717, 776, 801, 1074, 1389, 1689, 2361, 2646
NmeAIII GCCGAG 1 cut(s) 2458
NruI TCGCGA 3 cut(s) 1433, 1867, 2511
NsbI TGCGCA 1 cut(s) 2916
NsiI ATGCAT 2 cut(s) 1189, 2869
NspI RCATGY 4 cut(s) 44, 53, 496, 629
NspV TTCGAA 1 cut(s) 1149
OliI CACNNNNGTG 1 cut(s) 1136
PagI TCATGA 1 cut(s) 2971
PauI GCGCGC 2 cut(s) 2251, 2253
PceI AGGCCT 2 cut(s) 422, 2712
PciI ACATGT 2 cut(s) 492, 625
PciSI GCTCTTC 1 cut(s) 40
PcsI WCGNNNNNNNCGW 2 cut(s) 1332, 2942
PctI GAATGC 2 cut(s) 94, 1189
PdiI GCCGGC 2 cut(s) 642, 1248
PdmI GAANNNNTTC 2 cut(s) 1290, 2446
PfeI GAWTC 5 cut(s) 130, 1354, 1576, 1615, 2723
PflFI GACNNNGTC 1 cut(s) 1957
PflMI CCANNNNNTGG 3 cut(s) 688, 1117, 1950
PinAI ACCGGT 1 cut(s) 2872
PleI GAGTC 5 cut(s) 586, 979, 2024, 2470, 2651
PpsI GAGTC 5 cut(s) 586, 979, 2024, 2470, 2651
Ppu21I YACGTR 2 cut(s) 1204, 2848
PpuMI RGGWCCY 1 cut(s) 800
PscI ACATGT 2 cut(s) 492, 625
Psp124BI GAGCTC 1 cut(s) 2390
Psp5II RGGWCCY 1 cut(s) 800
Psp6I CCWGG 6 cut(s) 417, 498, 908, 1683, 2271, 2790
PspFI CCCAGC 1 cut(s) 777
PspGI CCWGG 6 cut(s) 417, 498, 908, 1683, 2271, 2790
PspN4I GGNNCC 9 cut(s) 639, 717, 776, 801, 1074, 1389, 1689, 2361, 2646
PspOMI GGGCCC 1 cut(s) 774
PspPPI RGGWCCY 1 cut(s) 800
PstI CTGCAG 1 cut(s) 2229
PstNI CAGNNNCTG 3 cut(s) 352, 505, 2278
PsuI RGATCY 1 cut(s) 199
PsyI GACNNNGTC 1 cut(s) 1957
PteI GCGCGC 2 cut(s) 2251, 2253
PvuII CAGCTG 2 cut(s) 781, 1372
RruI TCGCGA 3 cut(s) 1433, 1867, 2511
RsaI GTAC 8 cut(s) 470, 497, 624, 921, 1206, 2112, 2171, 2682
RsaNI GTAC 8 cut(s) 469, 496, 623, 920, 1205, 2111, 2170, 2681
RseI CAYNNNNRTG 4 cut(s) 54, 1136, 1278, 1892
SacI GAGCTC 1 cut(s) 2390
SacII CCGCGG 1 cut(s) 1800
SapI GCTCTTC 1 cut(s) 40
SaqAI TTAA 8 cut(s) 549, 1340, 1629, 2283, 2346, 2354, 2373, 2787
ScaI AGTACT 1 cut(s) 470
SchI GAGTC 5 cut(s) 586, 980, 2024, 2470, 2651
ScrFI CCNGG 7 cut(s) 419, 500, 714, 910, 1685, 2273, 2792
SduI GDGCHC 5 cut(s) 778, 1077, 2390, 2647, 2853
SfaNI GCATC 8 cut(s) 20, 880, 1196, 1438, 1859, 1896, 2411, 2974
SfcI CTRYAG 2 cut(s) 472, 2225
Sfr303I CCGCGG 1 cut(s) 1800
SfuI TTCGAA 1 cut(s) 1149
SgrBI CCGCGG 1 cut(s) 1800
SmiMI CAYNNNNRTG 4 cut(s) 54, 1136, 1278, 1892
SmlI CTYRAG 1 cut(s) 1400
SmoI CTYRAG 1 cut(s) 1400
SnaBI TACGTA 1 cut(s) 1204
SseBI AGGCCT 2 cut(s) 422, 2712
SspI AATATT 1 cut(s) 966
SstI GAGCTC 1 cut(s) 2390
StuI AGGCCT 2 cut(s) 422, 2712
StyD4I CCNGG 7 cut(s) 417, 498, 712, 908, 1683, 2271, 2790
StyI CCWWGG 3 cut(s) 770, 1383, 2154
TaaI ACNGT 7 cut(s) 649, 1225, 1280, 1755, 2583, 2738, 2891
TaiI ACGT 5 cut(s) 446, 736, 1206, 2080, 2850
TaqI TCGA 8 cut(s) 425, 1149, 1406, 1525, 1719, 1911, 2450, 2458
TaqII GACCGA 1 cut(s) 1520
TatI WGTACW 3 cut(s) 468, 622, 2110
TauI GCSGC 7 cut(s) 110, 314, 930, 1232, 1799, 1900, 2060
TfiI GAWTC 5 cut(s) 130, 1354, 1576, 1615, 2723
Tru1I TTAA 8 cut(s) 549, 1340, 1629, 2283, 2346, 2354, 2373, 2787
Tru9I TTAA 8 cut(s) 549, 1340, 1629, 2283, 2346, 2354, 2373, 2787
TscAI CASTG 8 cut(s) 140, 336, 1285, 1559, 1591, 2419, 2588, 2958
TspDTI ATGAA 4 cut(s) 1320, 1917, 2790, 2960
TspRI CASTG 8 cut(s) 140, 336, 1285, 1559, 1591, 2419, 2588, 2958
Tth111I GACNNNGTC 1 cut(s) 1957
Van91I CCANNNNNTGG 3 cut(s) 688, 1117, 1950
XapI RAATTY 3 cut(s) 1002, 1377, 1427
XceI RCATGY 4 cut(s) 44, 53, 496, 629
XcmI CCANNNNNNNNNTGG 1 cut(s) 2788
XmaJI CCTAGG 1 cut(s) 770
XmnI GAANNNNTTC 2 cut(s) 1290, 2446
ZrmI AGTACT 1 cut(s) 470
Zsp2I ATGCAT 2 cut(s) 1189, 2869
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.