Rmu_sc0000434.1_g000019

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000434.1
OG0000057
Physical Location & Seq
Forward (+)
112773 .. 114186
1414 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000434.1_g000019.1.cds

Sequence Viewer

Length: 1356 bp
atgtcaacttcacaaggtgagaatcgctcgaccgcgactgagggtcagagcgtcagtaccaatcaggccagcgagcctgttgattccgccactgtcaacgctgtagtgggcggtgatgaggaagaggctttcgtttcgaagcctatcccggaaggagcaaccttcgacgagacaattgcgatccttatggagaatgtcgagaatcatcgcaagaaaatggacgcagatctcgcgcgggaaaccgcgaagtcagaaaggctcatccgcgagttcgagcagcgtatgactctctatgcagaaaataccaggcagcaggtcacacagacagagagcgccttgaaggcgcaagctataaccatcgcggccgcacaaaatgagcgtcatacgacaatcctgaatgacatagcggatcattccaagcaaaccgcatcgaacatagcagatctccgcaaggatggggccaacttggcaactgaagtggctatgcagagagccgaattgaaccatgcgaaagaggtaatgcactcggccttaggcgatcctaatactatccttggttctgttgcccagccgtccagttcgggcaagtatgtacctccaaatcagcgcgaaaaggccaaccaaaacattgattcttcgtcagctactgcggctgctactccatcaaagaacaaggagcaggccttggtcattcctggcagggtgcagggactgcctaatactatccttggttctcttgcccagccgtccagttcgggcaagtatgtgcccccaaatcagcgcgaaaaggccaaccaaaacattggttcttcgtcagctactgcggctgctactccatcaaagaacaaggagcaggccttggtcattcctggcagtaaggagaagactgcttcatcaaatggacagactgccaagaaacaccaagtcgcgaggggtacagggactgcgtcagagcctgtgacttttgtccagtacgacagcgacggagcagaggtggtgtatcaagagttgccgggaagctattatgcactcaaccaaactggtatcccgatcaagataactgctctgtcgaaggaagaagttacccccgcagtgactctccagcagcaagctactacccgcattgtgcaggatggggaaagatcaacgatggtaaatcaaacaacccctggacaaactgttcaccgagctgcggtgatacctcctccgcccccgggcccagaatatgtgaggcgtgaggaggttgaggagatgatcagattggcaaaccctagggcccagccagatggacctcaagtgcaggatctttggcacttccctatctggcgctgctttcagatggttctccaaacttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

451

Amino Acids

48.61

Weight (kDa)

5.64

Isoelectric Point (pI)

47.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 304
AccII CGCG 9 cut(s) 35, 233, 235, 245, 267, 362, 609, 783, 929
AclWI GGATC 4 cut(s) 175, 417, 533, 1311
AcoI YGGCCR 1 cut(s) 363
AcuI CTGAAG 1 cut(s) 495
AdeI CACNNNGTG 1 cut(s) 17
AfaI GTAC 4 cut(s) 58, 594, 937, 974
AfiI CCNNNNNNNGG 2 cut(s) 1192, 1214
AgsI TTSAA 2 cut(s) 340, 502
AhdI GACNNNNNGTC 1 cut(s) 42
AjnI CCWGG 4 cut(s) 305, 694, 868, 1168
AloI GAACNNNNNNTCC 2 cut(s) 1164, 1196
AluBI AGCT 6 cut(s) 350, 644, 818, 1020, 1112, 1190
AluI AGCT 6 cut(s) 350, 644, 818, 1020, 1112, 1190
Alw26I GTCTC 1 cut(s) 164
AlwI GGATC 4 cut(s) 175, 417, 533, 1311
AlwNI CAGNNNCTG 5 cut(s) 647, 712, 821, 944, 956
Ama87I CYCGRG 1 cut(s) 1213
ApaI GGGCCC 2 cut(s) 1220, 1279
ApeKI GCWGC 7 cut(s) 277, 310, 653, 827, 1105, 1190, 1329
ArsI GACNNNNNNTTYG 2 cut(s) 364, 396
AspA2I CCTAGG 1 cut(s) 1271
AspLEI GCGC 6 cut(s) 235, 335, 346, 609, 783, 1329
AspS9I GGNCC 6 cut(s) 459, 1216, 1217, 1275, 1276, 1289
AsuC2I CCSGG 4 cut(s) 149, 1014, 1214, 1215
AsuHPI GGTGA 4 cut(s) 29, 125, 1175, 1207
AsuII TTCGAA 1 cut(s) 137
AvaI CYCGRG 1 cut(s) 1213
AvaII GGWCC 1 cut(s) 1289
AvrII CCTAGG 1 cut(s) 1271
AxyI CCTNAGG 1 cut(s) 532
BaeGI GKGCMC 3 cut(s) 771, 1220, 1279
BanII GRGCYC 2 cut(s) 1220, 1279
BbsI GAAGAC 1 cut(s) 890
BbvI GCAGC 7 cut(s) 289, 322, 640, 814, 1117, 1177, 1316
BccI CCATC 8 cut(s) 365, 449, 670, 844, 1127, 1144, 1280, 1333
BceAI ACGGC 2 cut(s) 556, 730
BcgI CGANNNNNNTGC 2 cut(s) 158, 192
BciT130I CCWGG 4 cut(s) 307, 696, 870, 1170
BciVI GTATCC 1 cut(s) 1055
BclI TGATCA 1 cut(s) 1254
BcnI CCSGG 4 cut(s) 149, 1014, 1214, 1215
BcoDI GTCTC 1 cut(s) 164
BfaI CTAG 1 cut(s) 1272
BfmI CTRYAG 1 cut(s) 102
BfoI RGCGCY 2 cut(s) 336, 1330
BfuAI ACCTGC 1 cut(s) 304
BfuI GTATCC 1 cut(s) 1055
BglI GCCNNNNNGGC 2 cut(s) 341, 467
BglII AGATCT 2 cut(s) 226, 442
BlnI CCTAGG 1 cut(s) 1271
Bme1390I CCNGG 8 cut(s) 149, 307, 696, 870, 1014, 1170, 1214, 1215
Bme18I GGWCC 1 cut(s) 1289
BmeRI GACNNNNNGTC 1 cut(s) 42
BmeT110I CYCGRG 1 cut(s) 1213
BmgT120I GGNCC 6 cut(s) 459, 1216, 1217, 1275, 1276, 1289
BmiI GGNNCC 3 cut(s) 460, 1218, 1277
BmrFI CCNGG 8 cut(s) 149, 307, 696, 870, 1014, 1170, 1214, 1215
BmsI GCATC 1 cut(s) 437
BoxI GACNNNNGTC 1 cut(s) 965
BpiI GAAGAC 1 cut(s) 890
BplI GAGNNNNNCTC 2 cut(s) 11, 43
BpmI CTGGAG 1 cut(s) 1085
Bpu14I TTCGAA 1 cut(s) 137
BpuEI CTTGAG 1 cut(s) 1278
BpuMI CCSGG 4 cut(s) 149, 1014, 1214, 1215
BsaJI CCNNGG 8 cut(s) 553, 684, 727, 858, 1168, 1212, 1213, 1271
BsaXI ACNNNNNCTCC 2 cut(s) 978, 1008
Bsc4I CCNNNNNNNGG 2 cut(s) 1192, 1214
Bse1I ACTGG 4 cut(s) 576, 750, 970, 1045
Bse21I CCTNAGG 1 cut(s) 532
BseBI CCWGG 4 cut(s) 307, 696, 870, 1170
BseDI CCNNGG 8 cut(s) 553, 684, 727, 858, 1168, 1212, 1213, 1271
BseGI GGATG 3 cut(s) 261, 460, 1138
BseLI CCNNNNNNNGG 2 cut(s) 1192, 1214
BseMII CTCAG 1 cut(s) 30
BseNI ACTGG 4 cut(s) 576, 750, 970, 1045
BseRI GAGGAG 3 cut(s) 1194, 1253, 1262
BseSI GKGCMC 3 cut(s) 771, 1220, 1279
BseX3I CGGCCG 1 cut(s) 363
BseXI GCAGC 7 cut(s) 289, 322, 640, 814, 1117, 1177, 1316
BseYI CCCAGC 3 cut(s) 567, 741, 1278
BsgI GTGCAG 3 cut(s) 725, 1148, 1319
Bsh1236I CGCG 9 cut(s) 35, 233, 235, 245, 267, 362, 609, 783, 929
Bsh1285I CGRYCG 2 cut(s) 33, 366
BsiEI CGRYCG 2 cut(s) 33, 366
BsiHKCI CYCGRG 1 cut(s) 1213
BsiSI CCGG 3 cut(s) 149, 1013, 1214
BslFI GGGAC 2 cut(s) 723, 955
BslI CCNNNNNNNGG 2 cut(s) 1192, 1214
BsmAI GTCTC 1 cut(s) 164
BsmFI GGGAC 2 cut(s) 723, 955
BsoBI CYCGRG 1 cut(s) 1213
Bsp119I TTCGAA 1 cut(s) 137
Bsp120I GGGCCC 2 cut(s) 1216, 1275
Bsp1286I GDGCHC 3 cut(s) 771, 1220, 1279
Bsp143I GATC 9 cut(s) 180, 226, 409, 442, 538, 1050, 1142, 1254, 1303
Bsp68I TCGCGA 1 cut(s) 929
BspCNI CTCAG 1 cut(s) 31
BspFNI CGCG 9 cut(s) 35, 233, 235, 245, 267, 362, 609, 783, 929
BspLI GGNNCC 3 cut(s) 460, 1218, 1277
BspMI ACCTGC 1 cut(s) 304
BspPI GGATC 4 cut(s) 175, 417, 533, 1311
BspT104I TTCGAA 1 cut(s) 137
BsrI ACTGG 4 cut(s) 576, 750, 970, 1045
BssECI CCNNGG 8 cut(s) 553, 684, 727, 858, 1168, 1212, 1213, 1271
BssMI GATC 9 cut(s) 180, 226, 409, 442, 538, 1050, 1142, 1254, 1303
BssT1I CCWWGG 5 cut(s) 553, 684, 727, 858, 1271
Bst2UI CCWGG 4 cut(s) 307, 696, 870, 1170
Bst4CI ACNGT 2 cut(s) 94, 1180
Bst6I CTCTTC 1 cut(s) 117
BstAPI GCANNNNNTGC 1 cut(s) 712
BstBI TTCGAA 1 cut(s) 137
BstC8I GCNNGC 6 cut(s) 70, 74, 348, 681, 855, 1110
BstDEI CTNAG 3 cut(s) 39, 532, 1353
BstF5I GGATG 3 cut(s) 261, 460, 1138
BstFNI CGCG 9 cut(s) 35, 233, 235, 245, 267, 362, 609, 783, 929
BstH2I RGCGCY 2 cut(s) 336, 1330
BstHHI GCGC 6 cut(s) 235, 335, 346, 609, 783, 1329
BstKTI GATC 9 cut(s) 183, 229, 412, 445, 541, 1053, 1145, 1257, 1306
BstMAI GTCTC 1 cut(s) 164
BstMBI GATC 9 cut(s) 180, 226, 409, 442, 538, 1050, 1142, 1254, 1303
BstMCI CGRYCG 2 cut(s) 33, 366
BstMWI GCNNNNNNNGC 6 cut(s) 230, 341, 467, 650, 712, 824
BstNI CCWGG 4 cut(s) 307, 696, 870, 1170
BstPAI GACNNNNGTC 1 cut(s) 965
BstSCI CCNGG 8 cut(s) 147, 305, 694, 868, 1012, 1168, 1212, 1213
BstSFI CTRYAG 1 cut(s) 102
BstSLI GKGCMC 3 cut(s) 771, 1220, 1279
BstUI CGCG 9 cut(s) 35, 233, 235, 245, 267, 362, 609, 783, 929
BstV1I GCAGC 7 cut(s) 289, 322, 640, 814, 1117, 1177, 1316
BstV2I GAAGAC 1 cut(s) 890
BstX2I RGATCY 3 cut(s) 226, 442, 1303
BstXI CCANNNNNNTGG 2 cut(s) 803, 1286
BstYI RGATCY 3 cut(s) 226, 442, 1303
BstZI CGGCCG 1 cut(s) 363
Bsu36I CCTNAGG 1 cut(s) 532
BsuI GTATCC 1 cut(s) 1055
BtgZI GCGATG 2 cut(s) 191, 343
BtsCI GGATG 3 cut(s) 261, 460, 1138
BtsI GCAGTG 1 cut(s) 1098
BtsIMutI CAGTG 2 cut(s) 90, 1098
BtuMI TCGCGA 1 cut(s) 929
BveI ACCTGC 1 cut(s) 304
Cac8I GCNNGC 6 cut(s) 70, 74, 348, 681, 855, 1110
CaiI CAGNNNCTG 5 cut(s) 647, 712, 821, 944, 956
CciNI GCGGCCGC 1 cut(s) 363
CfoI GCGC 6 cut(s) 235, 335, 346, 609, 783, 1329
Cfr13I GGNCC 6 cut(s) 459, 1216, 1217, 1275, 1276, 1289
Cfr9I CCCGGG 1 cut(s) 1213
CseI GACGC 4 cut(s) 40, 230, 368, 936
Csp6I GTAC 4 cut(s) 57, 593, 936, 973
CspCI CAANNNNNGTGG 2 cut(s) 459, 494
CviAII CATG 1 cut(s) 506
CviQI GTAC 4 cut(s) 57, 593, 936, 973
DdeI CTNAG 3 cut(s) 39, 532, 1353
DpnI GATC 9 cut(s) 182, 228, 411, 444, 540, 1052, 1144, 1256, 1305
DpnII GATC 9 cut(s) 180, 226, 409, 442, 538, 1050, 1142, 1254, 1303
DraIII CACNNNGTG 1 cut(s) 17
DriI GACNNNNNGTC 1 cut(s) 42
EaeI YGGCCR 1 cut(s) 363
EagI CGGCCG 1 cut(s) 363
Eam1104I CTCTTC 1 cut(s) 117
Eam1105I GACNNNNNGTC 1 cut(s) 42
EarI CTCTTC 1 cut(s) 117
EciI GGCGGA 2 cut(s) 76, 1197
EclXI CGGCCG 1 cut(s) 363
Eco130I CCWWGG 5 cut(s) 553, 684, 727, 858, 1271
Eco147I AGGCCT 2 cut(s) 683, 857
Eco24I GRGCYC 2 cut(s) 1220, 1279
Eco47I GGWCC 1 cut(s) 1289
Eco52I CGGCCG 1 cut(s) 363
Eco57I CTGAAG 1 cut(s) 495
Eco81I CCTNAGG 1 cut(s) 532
Eco88I CYCGRG 1 cut(s) 1213
EcoO109I RGGNCCY 1 cut(s) 1275
EcoRII CCWGG 4 cut(s) 305, 694, 868, 1168
EcoT14I CCWWGG 5 cut(s) 553, 684, 727, 858, 1271
EcoT38I GRGCYC 2 cut(s) 1220, 1279
ErhI CCWWGG 5 cut(s) 553, 684, 727, 858, 1271
FaeI CATG 1 cut(s) 509
FaqI GGGAC 2 cut(s) 723, 955
FatI CATG 1 cut(s) 505
FauI CCCGC 3 cut(s) 228, 1096, 1127
FbaI TGATCA 1 cut(s) 1254
FokI GGATG 3 cut(s) 248, 467, 1145
FriOI GRGCYC 2 cut(s) 1220, 1279
FspBI CTAG 1 cut(s) 1272
GlaI GCGC 6 cut(s) 234, 334, 345, 608, 782, 1328
GsaI CCCAGC 3 cut(s) 571, 745, 1282
GsuI CTGGAG 1 cut(s) 1085
HaeII RGCGCY 2 cut(s) 336, 1330
HapII CCGG 3 cut(s) 149, 1013, 1214
HgaI GACGC 4 cut(s) 40, 230, 368, 936
HhaI GCGC 6 cut(s) 235, 335, 346, 609, 783, 1329
Hin1II CATG 1 cut(s) 509
Hin6I GCGC 6 cut(s) 233, 333, 344, 607, 781, 1327
HinP1I GCGC 6 cut(s) 233, 333, 344, 607, 781, 1327
HincII GTYRAC 2 cut(s) 6, 97
HindII GTYRAC 2 cut(s) 6, 97
HinfI GANTC 6 cut(s) 22, 83, 202, 286, 632, 1096
HpaII CCGG 3 cut(s) 149, 1013, 1214
HphI GGTGA 4 cut(s) 29, 125, 1175, 1207
Hpy166II GTNNAC 3 cut(s) 6, 97, 1183
Hpy188I TCNGA 5 cut(s) 48, 253, 952, 1259, 1338
Hpy188III TCNNGA 6 cut(s) 199, 394, 928, 1004, 1048, 1054
Hpy8I GTNNAC 3 cut(s) 6, 97, 1183
Hpy99I CGWCG 2 cut(s) 170, 986
HpyAV CCTTC 4 cut(s) 146, 172, 334, 1066
HpyCH4III ACNGT 2 cut(s) 94, 1180
HpyCH4V TGCA 7 cut(s) 296, 487, 523, 706, 1028, 1129, 1300
HpyF10VI GCNNNNNNNGC 6 cut(s) 230, 341, 467, 650, 712, 824
HpyF3I CTNAG 3 cut(s) 39, 532, 1353
Hsp92II CATG 1 cut(s) 509
HspAI GCGC 6 cut(s) 233, 333, 344, 607, 781, 1327
Ksp22I TGATCA 1 cut(s) 1254
Kzo9I GATC 9 cut(s) 180, 226, 409, 442, 538, 1050, 1142, 1254, 1303
LmnI GCTCC 4 cut(s) 155, 676, 850, 986
Lsp1109I GCAGC 7 cut(s) 289, 322, 640, 814, 1117, 1177, 1316
LweI GCATC 1 cut(s) 437
MaeI CTAG 1 cut(s) 1272
MaeIII GTNAC 4 cut(s) 316, 958, 1081, 1093
MalI GATC 9 cut(s) 182, 228, 411, 444, 540, 1052, 1144, 1256, 1305
MboI GATC 9 cut(s) 180, 226, 409, 442, 538, 1050, 1142, 1254, 1303
MboII GAAGA 5 cut(s) 134, 627, 801, 895, 1088
MfeI CAATTG 1 cut(s) 174
MflI RGATCY 3 cut(s) 226, 442, 1303
MhlI GDGCHC 3 cut(s) 771, 1220, 1279
MluCI AATT 2 cut(s) 174, 497
MlyI GAGTC 2 cut(s) 280, 1090
MspI CCGG 3 cut(s) 149, 1013, 1214
MspR9I CCNGG 8 cut(s) 149, 307, 696, 870, 1014, 1170, 1214, 1215
MunI CAATTG 1 cut(s) 174
MvaI CCWGG 4 cut(s) 307, 696, 870, 1170
MvnI CGCG 9 cut(s) 35, 233, 235, 245, 267, 362, 609, 783, 929
MwoI GCNNNNNNNGC 6 cut(s) 230, 341, 467, 650, 712, 824
NciI CCSGG 4 cut(s) 149, 1014, 1214, 1215
NdeII GATC 9 cut(s) 180, 226, 409, 442, 538, 1050, 1142, 1254, 1303
NlaIII CATG 1 cut(s) 509
NlaIV GGNNCC 3 cut(s) 460, 1218, 1277
NmeAIII GCCGAG 1 cut(s) 506
NmuCI GTSAC 3 cut(s) 316, 958, 1093
NotI GCGGCCGC 1 cut(s) 363
NruI TCGCGA 1 cut(s) 929
NspV TTCGAA 1 cut(s) 137
PceI AGGCCT 2 cut(s) 683, 857
PfeI GAWTC 4 cut(s) 22, 83, 202, 632
PflFI GACNNNGTC 1 cut(s) 946
PfoI TCCNGGA 1 cut(s) 147
PleI GAGTC 2 cut(s) 280, 1090
PpsI GAGTC 2 cut(s) 280, 1090
PshAI GACNNNNGTC 1 cut(s) 965
Psp6I CCWGG 4 cut(s) 305, 694, 868, 1168
PspFI CCCAGC 3 cut(s) 567, 741, 1278
PspGI CCWGG 4 cut(s) 305, 694, 868, 1168
PspN4I GGNNCC 3 cut(s) 460, 1218, 1277
PspOMI GGGCCC 2 cut(s) 1216, 1275
PspPI GGNCC 6 cut(s) 459, 1216, 1217, 1275, 1276, 1289
PstNI CAGNNNCTG 5 cut(s) 647, 712, 821, 944, 956
PsuI RGATCY 3 cut(s) 226, 442, 1303
PsyI GACNNNGTC 1 cut(s) 946
RruI TCGCGA 1 cut(s) 929
RsaI GTAC 4 cut(s) 58, 594, 937, 974
RsaNI GTAC 4 cut(s) 57, 593, 936, 973
Sau3AI GATC 9 cut(s) 180, 226, 409, 442, 538, 1050, 1142, 1254, 1303
Sau96I GGNCC 6 cut(s) 459, 1216, 1217, 1275, 1276, 1289
SchI GAGTC 2 cut(s) 280, 1090
ScrFI CCNGG 8 cut(s) 149, 307, 696, 870, 1014, 1170, 1214, 1215
SduI GDGCHC 3 cut(s) 771, 1220, 1279
SfaNI GCATC 1 cut(s) 437
SfcI CTRYAG 1 cut(s) 102
SfuI TTCGAA 1 cut(s) 137
SinI GGWCC 1 cut(s) 1289
SmaI CCCGGG 1 cut(s) 1215
SmlI CTYRAG 1 cut(s) 1293
SmoI CTYRAG 1 cut(s) 1293
Sse9I AATT 2 cut(s) 174, 497
SseBI AGGCCT 2 cut(s) 683, 857
SspMI CTAG 1 cut(s) 1272
StuI AGGCCT 2 cut(s) 683, 857
StyD4I CCNGG 8 cut(s) 147, 305, 694, 868, 1012, 1168, 1212, 1213
StyI CCWWGG 5 cut(s) 553, 684, 727, 858, 1271
TaaI ACNGT 2 cut(s) 94, 1180
TaqI TCGA 7 cut(s) 29, 137, 165, 198, 273, 431, 1070
TasI AATT 2 cut(s) 174, 497
TauI GCSGC 4 cut(s) 365, 368, 653, 827
TfiI GAWTC 4 cut(s) 22, 83, 202, 632
TscAI CASTG 2 cut(s) 97, 1098
TseFI GTSAC 3 cut(s) 316, 958, 1093
TseI GCWGC 7 cut(s) 277, 310, 653, 827, 1105, 1190, 1329
Tsp45I GTSAC 3 cut(s) 316, 958, 1093
TspDTI ATGAA 1 cut(s) 882
TspGWI ACGGA 1 cut(s) 999
TspMI CCCGGG 1 cut(s) 1213
TspRI CASTG 2 cut(s) 97, 1098
Tth111I GACNNNGTC 1 cut(s) 946
VpaK11BI GGWCC 1 cut(s) 1289
XmaI CCCGGG 1 cut(s) 1213
XmaJI CCTAGG 1 cut(s) 1271
XspI CTAG 1 cut(s) 1272
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.