Rmu_sc0010900.1_g000002

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010900.1
OG0000057
Physical Location & Seq
Reverse (-)
14591 .. 15832
1242 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010900.1_g000002.1.cds

Sequence Viewer

Length: 1242 bp
atgtcaacttcacaaggtgagaatcgctcgaccgcgactgagggtcagagcgtcagcactaatcaggctagcgagcctgttgattccaccgctgtcaacactatagtgggcggtgatggggaagaggcttttgtttcaaagcctatcccggaaggagcaacctttgacgagacaattgcgatccttatggagaatgttgagaatcatagcaagaagatggacgcagatctcgcacgggaaaccgagaagtcagaaaggctcctccgcgagttcgagcagcgtatgactctttatgcagaaaataccaggcagcaggtcacacagacagagagcgctttgaaggcgcaagctataaccatcgctgccgcacaaaatgagcggcatacgacaatcttgaatgccatcgcggatcattctaagcaaaccgcatcaaacatagcagatctccgtaaggatggggccaacctggcaactgaagtggctatgcagagagccgaattgaaccatgcgaaggaggtgatgcactcggccctaggtgatcctaatactatccttggttctctcgcccagccgtccagttcgggcaagtatgtgcccccaaaccagcgagaaaagggtaaccaaaacattggttcttcgtcagctactgcggctgctactccatcaaagaacaaggaacaggccttgttcattcctggcagtaaagagaagactgcttcatcgagtggacaggccaccaagaaacaccaagtcgcgaggggtgcagggactgtgtcagagcctgtgacttttgtccagtacgacagcgacggagcaaaggtggtgtatcaagagttgccaggaagctattatgcactcgaccaaactggtatcccgatcaagataaccgctttgtcgaatgaggagattgcccctgcagtgaccctccagcagcaagctaccacccgtattgtgcatgccggggaggggtcaacaatggtaaatcaggcagcccctcagcaggttgctcaccgggctgcggtgatgcctcctccgcctccaggcccagagtacgtgagacgtgatgaggtggaggagatgatcagattggcaaaccctagggcccagccagatggagtgtacgaaggacctttcccgccaaacatcatgctcgcacctttccctcgaggttataaaacattattttctccaattttcaggggaagacacggaagatgcggccactcatctggccagatttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

413

Amino Acids

44.31

Weight (kDa)

5.87

Isoelectric Point (pI)

46.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1173
AbsI CCTCGAGG 1 cut(s) 1164
Acc36I ACCTGC 2 cut(s) 304, 991
AccBSI CCGCTC 1 cut(s) 379
AccII CGCG 4 cut(s) 35, 267, 407, 755
AclWI GGATC 3 cut(s) 175, 417, 533
AcoI YGGCCR 2 cut(s) 1219, 1231
AcuI CTGAAG 1 cut(s) 495
AdeI CACNNNGTG 1 cut(s) 17
AfaI GTAC 3 cut(s) 800, 1052, 1121
AfeI AGCGCT 1 cut(s) 334
AfiI CCNNNNNNNGG 5 cut(s) 511, 966, 1000, 1018, 1040
AgsI TTSAA 4 cut(s) 138, 340, 397, 502
AhdI GACNNNNNGTC 1 cut(s) 42
AjiI CACGTC 1 cut(s) 1061
AjnI CCWGG 5 cut(s) 305, 465, 694, 838, 1039
AleI CACNNNNGTG 1 cut(s) 104
AluBI AGCT 4 cut(s) 350, 644, 846, 938
AluI AGCT 4 cut(s) 350, 644, 846, 938
Alw26I GTCTC 2 cut(s) 164, 1051
AlwI GGATC 3 cut(s) 175, 417, 533
AlwNI CAGNNNCTG 3 cut(s) 647, 770, 782
Ama87I CYCGRG 1 cut(s) 1164
Aor51HI AGCGCT 1 cut(s) 334
AoxI GGCC 8 cut(s) 459, 528, 681, 732, 1042, 1101, 1219, 1231
ApaI GGGCCC 1 cut(s) 1105
ApeKI GCWGC 7 cut(s) 277, 310, 362, 653, 931, 989, 1016
AspA2I CCTAGG 2 cut(s) 532, 1097
AspLEI GCGC 2 cut(s) 335, 346
AspS9I GGNCC 6 cut(s) 459, 529, 1043, 1101, 1102, 1127
AsuC2I CCSGG 3 cut(s) 149, 961, 1013
AsuHPI GGTGA 6 cut(s) 29, 125, 529, 548, 1001, 1033
AsuNHI GCTAGC 1 cut(s) 68
AvaI CYCGRG 1 cut(s) 1164
AvaII GGWCC 1 cut(s) 1127
AvrII CCTAGG 2 cut(s) 532, 1097
BaeGI GKGCMC 2 cut(s) 597, 1105
BalI TGGCCA 1 cut(s) 1233
BanII GRGCYC 1 cut(s) 1105
BbsI GAAGAC 2 cut(s) 716, 1210
BbvCI CCTCAGC 1 cut(s) 996
BbvI GCAGC 7 cut(s) 289, 322, 349, 640, 943, 1001, 1003
BccI CCATC 7 cut(s) 110, 211, 365, 410, 449, 670, 1106
BceAI ACGGC 1 cut(s) 556
BcgI CGANNNNNNTGC 2 cut(s) 158, 192
BciT130I CCWGG 5 cut(s) 307, 467, 696, 840, 1041
BciVI GTATCC 1 cut(s) 881
BclI TGATCA 1 cut(s) 1080
BcnI CCSGG 3 cut(s) 149, 961, 1013
BcoDI GTCTC 2 cut(s) 164, 1051
BfaI CTAG 3 cut(s) 69, 533, 1098
BfmI CTRYAG 2 cut(s) 102, 915
BfoI RGCGCY 1 cut(s) 336
BfuAI ACCTGC 2 cut(s) 304, 991
BfuI GTATCC 1 cut(s) 881
BglI GCCNNNNNGGC 1 cut(s) 467
BglII AGATCT 2 cut(s) 226, 442
BlnI CCTAGG 2 cut(s) 532, 1097
Bme1390I CCNGG 8 cut(s) 149, 307, 467, 696, 840, 961, 1013, 1041
Bme18I GGWCC 1 cut(s) 1127
BmeRI GACNNNNNGTC 1 cut(s) 42
BmeT110I CYCGRG 1 cut(s) 1164
BmgBI CACGTC 1 cut(s) 1061
BmgT120I GGNCC 6 cut(s) 459, 529, 1043, 1101, 1102, 1127
BmiI GGNNCC 3 cut(s) 260, 460, 1103
BmrFI CCNGG 8 cut(s) 149, 307, 467, 696, 840, 961, 1013, 1041
BmsI GCATC 4 cut(s) 437, 510, 1014, 1205
BmtI GCTAGC 1 cut(s) 72
BoxI GACNNNNGTC 1 cut(s) 791
BpiI GAAGAC 2 cut(s) 716, 1210
BplI GAGNNNNNCTC 2 cut(s) 11, 43
BpmI CTGGAG 2 cut(s) 911, 1023
Bpu10I CCTNAGC 1 cut(s) 996
BpuMI CCSGG 3 cut(s) 149, 961, 1013
BsaAI YACGTR 1 cut(s) 1054
BsaJI CCNNGG 4 cut(s) 532, 553, 960, 1097
BsaXI ACNNNNNCTCC 2 cut(s) 804, 834
Bsc4I CCNNNNNNNGG 5 cut(s) 511, 966, 1000, 1018, 1040
Bse1I ACTGG 3 cut(s) 576, 796, 871
BseBI CCWGG 5 cut(s) 307, 467, 696, 840, 1041
BseDI CCNNGG 4 cut(s) 532, 553, 960, 1097
BseGI GGATG 1 cut(s) 460
BseLI CCNNNNNNNGG 5 cut(s) 511, 966, 1000, 1018, 1040
BseMII CTCAG 2 cut(s) 30, 1010
BseNI ACTGG 3 cut(s) 576, 796, 871
BseRI GAGGAG 4 cut(s) 251, 917, 1020, 1088
BseSI GKGCMC 2 cut(s) 597, 1105
BseXI GCAGC 7 cut(s) 289, 322, 349, 640, 943, 1001, 1003
BseYI CCCAGC 2 cut(s) 567, 1104
BsgI GTGCAG 1 cut(s) 783
Bsh1236I CGCG 4 cut(s) 35, 267, 407, 755
Bsh1285I CGRYCG 1 cut(s) 33
BshFI GGCC 8 cut(s) 461, 530, 683, 734, 1044, 1103, 1221, 1233
BsiEI CGRYCG 1 cut(s) 33
BsiHKCI CYCGRG 1 cut(s) 1164
BsiSI CCGG 3 cut(s) 149, 960, 1012
BslFI GGGAC 1 cut(s) 781
BslI CCNNNNNNNGG 5 cut(s) 511, 966, 1000, 1018, 1040
BsmAI GTCTC 2 cut(s) 164, 1051
BsmBI CGTCTC 1 cut(s) 1051
BsmFI GGGAC 1 cut(s) 781
BsmI GAATGC 1 cut(s) 403
BsnI GGCC 8 cut(s) 461, 530, 683, 734, 1044, 1103, 1221, 1233
BsoBI CYCGRG 1 cut(s) 1164
Bsp120I GGGCCC 1 cut(s) 1101
Bsp1286I GDGCHC 2 cut(s) 597, 1105
Bsp143I GATC 7 cut(s) 180, 226, 409, 442, 538, 876, 1080
Bsp68I TCGCGA 1 cut(s) 755
BspANI GGCC 8 cut(s) 461, 530, 683, 734, 1044, 1103, 1221, 1233
BspCNI CTCAG 2 cut(s) 31, 1009
BspFNI CGCG 4 cut(s) 35, 267, 407, 755
BspLI GGNNCC 3 cut(s) 260, 460, 1103
BspMAI CTGCAG 1 cut(s) 919
BspMI ACCTGC 2 cut(s) 304, 991
BspOI GCTAGC 1 cut(s) 72
BspPI GGATC 3 cut(s) 175, 417, 533
BsrBI CCGCTC 1 cut(s) 379
BsrI ACTGG 3 cut(s) 576, 796, 871
BssECI CCNNGG 4 cut(s) 532, 553, 960, 1097
BssMI GATC 7 cut(s) 180, 226, 409, 442, 538, 876, 1080
BssT1I CCWWGG 3 cut(s) 532, 553, 1097
Bst2UI CCWGG 5 cut(s) 307, 467, 696, 840, 1041
Bst4CI ACNGT 1 cut(s) 772
Bst6I CTCTTC 1 cut(s) 117
BstBAI YACGTR 1 cut(s) 1054
BstC8I GCNNGC 6 cut(s) 70, 74, 348, 936, 957, 1152
BstDEI CTNAG 3 cut(s) 39, 417, 996
BstEII GGTNACC 1 cut(s) 617
BstF5I GGATG 1 cut(s) 460
BstFNI CGCG 4 cut(s) 35, 267, 407, 755
BstH2I RGCGCY 1 cut(s) 336
BstHHI GCGC 2 cut(s) 335, 346
BstKTI GATC 7 cut(s) 183, 229, 412, 445, 541, 879, 1083
BstMAI GTCTC 2 cut(s) 164, 1051
BstMBI GATC 7 cut(s) 180, 226, 409, 442, 538, 876, 1080
BstMCI CGRYCG 1 cut(s) 33
BstMWI GCNNNNNNNGC 7 cut(s) 230, 341, 467, 650, 761, 1013, 1033
BstNI CCWGG 5 cut(s) 307, 467, 696, 840, 1041
BstNSI RCATGY 1 cut(s) 959
BstPAI GACNNNNGTC 1 cut(s) 791
BstPI GGTNACC 1 cut(s) 617
BstSCI CCNGG 8 cut(s) 147, 305, 465, 694, 838, 959, 1011, 1039
BstSFI CTRYAG 2 cut(s) 102, 915
BstSLI GKGCMC 2 cut(s) 597, 1105
BstUI CGCG 4 cut(s) 35, 267, 407, 755
BstV1I GCAGC 7 cut(s) 289, 322, 349, 640, 943, 1001, 1003
BstV2I GAAGAC 2 cut(s) 716, 1210
BstX2I RGATCY 2 cut(s) 226, 442
BstXI CCANNNNNNTGG 3 cut(s) 629, 1112, 1229
BstYI RGATCY 2 cut(s) 226, 442
BsuI GTATCC 1 cut(s) 881
BsuRI GGCC 8 cut(s) 461, 530, 683, 734, 1044, 1103, 1221, 1233
BtgZI GCGATG 2 cut(s) 343, 388
BtrI CACGTC 1 cut(s) 1061
BtsCI GGATG 1 cut(s) 460
BtsI GCAGTG 1 cut(s) 924
BtsIMutI CAGTG 1 cut(s) 924
BtuMI TCGCGA 1 cut(s) 755
BveI ACCTGC 2 cut(s) 304, 991
Cac8I GCNNGC 6 cut(s) 70, 74, 348, 936, 957, 1152
CaiI CAGNNNCTG 3 cut(s) 647, 770, 782
CfoI GCGC 2 cut(s) 335, 346
Cfr13I GGNCC 6 cut(s) 459, 529, 1043, 1101, 1102, 1127
CseI GACGC 2 cut(s) 40, 230
Csp6I GTAC 3 cut(s) 799, 1051, 1120
CspCI CAANNNNNGTGG 4 cut(s) 459, 494, 931, 966
CviAII CATG 3 cut(s) 506, 956, 1147
CviQI GTAC 3 cut(s) 799, 1051, 1120
DdeI CTNAG 3 cut(s) 39, 417, 996
DpnI GATC 7 cut(s) 182, 228, 411, 444, 540, 878, 1082
DpnII GATC 7 cut(s) 180, 226, 409, 442, 538, 876, 1080
DraIII CACNNNGTG 1 cut(s) 17
DriI GACNNNNNGTC 1 cut(s) 42
EaeI YGGCCR 2 cut(s) 1219, 1231
Eam1104I CTCTTC 1 cut(s) 117
Eam1105I GACNNNNNGTC 1 cut(s) 42
EarI CTCTTC 1 cut(s) 117
EciI GGCGGA 1 cut(s) 1023
Eco130I CCWWGG 3 cut(s) 532, 553, 1097
Eco147I AGGCCT 1 cut(s) 683
Eco24I GRGCYC 1 cut(s) 1105
Eco47I GGWCC 1 cut(s) 1127
Eco47III AGCGCT 1 cut(s) 334
Eco57I CTGAAG 1 cut(s) 495
Eco88I CYCGRG 1 cut(s) 1164
Eco91I GGTNACC 1 cut(s) 617
EcoO109I RGGNCCY 2 cut(s) 1101, 1127
EcoO65I GGTNACC 1 cut(s) 617
EcoRII CCWGG 5 cut(s) 305, 465, 694, 838, 1039
EcoT14I CCWWGG 3 cut(s) 532, 553, 1097
EcoT38I GRGCYC 1 cut(s) 1105
ErhI CCWWGG 3 cut(s) 532, 553, 1097
Esp3I CGTCTC 1 cut(s) 1051
FaeI CATG 3 cut(s) 509, 959, 1150
FaqI GGGAC 1 cut(s) 781
FatI CATG 3 cut(s) 505, 955, 1146
FauI CCCGC 1 cut(s) 1143
FbaI TGATCA 1 cut(s) 1080
FokI GGATG 1 cut(s) 467
FriOI GRGCYC 1 cut(s) 1105
FspBI CTAG 3 cut(s) 69, 533, 1098
GlaI GCGC 2 cut(s) 334, 345
GsaI CCCAGC 2 cut(s) 571, 1108
GsuI CTGGAG 2 cut(s) 911, 1023
HaeII RGCGCY 1 cut(s) 336
HaeIII GGCC 8 cut(s) 461, 530, 683, 734, 1044, 1103, 1221, 1233
HapII CCGG 3 cut(s) 149, 960, 1012
HgaI GACGC 2 cut(s) 40, 230
HhaI GCGC 2 cut(s) 335, 346
Hin1II CATG 3 cut(s) 509, 959, 1150
Hin6I GCGC 2 cut(s) 333, 344
HinP1I GCGC 2 cut(s) 333, 344
HincII GTYRAC 3 cut(s) 6, 97, 972
HindII GTYRAC 3 cut(s) 6, 97, 972
HinfI GANTC 4 cut(s) 22, 83, 202, 286
HpaII CCGG 3 cut(s) 149, 960, 1012
HphI GGTGA 6 cut(s) 29, 125, 529, 548, 1001, 1033
Hpy166II GTNNAC 5 cut(s) 6, 97, 728, 972, 1120
Hpy188I TCNGA 4 cut(s) 48, 253, 778, 1085
Hpy188III TCNNGA 5 cut(s) 394, 754, 830, 874, 880
Hpy8I GTNNAC 5 cut(s) 6, 97, 728, 972, 1120
Hpy99I CGWCG 1 cut(s) 812
HpyAV CCTTC 4 cut(s) 146, 334, 505, 1118
HpyCH4III ACNGT 1 cut(s) 772
HpyCH4IV ACGT 2 cut(s) 1053, 1060
HpyCH4V TGCA 7 cut(s) 296, 487, 523, 764, 854, 917, 955
HpyF10VI GCNNNNNNNGC 7 cut(s) 230, 341, 467, 650, 761, 1013, 1033
HpyF3I CTNAG 3 cut(s) 39, 417, 996
HpySE526I ACGT 2 cut(s) 1053, 1060
Hsp92II CATG 3 cut(s) 509, 959, 1150
HspAI GCGC 2 cut(s) 333, 344
Ksp22I TGATCA 1 cut(s) 1080
Kzo9I GATC 7 cut(s) 180, 226, 409, 442, 538, 876, 1080
LmnI GCTCC 3 cut(s) 155, 264, 812
Lsp1109I GCAGC 7 cut(s) 289, 322, 349, 640, 943, 1001, 1003
LweI GCATC 4 cut(s) 437, 510, 1014, 1205
MaeI CTAG 3 cut(s) 69, 533, 1098
MaeII ACGT 2 cut(s) 1053, 1060
MaeIII GTNAC 4 cut(s) 316, 617, 784, 919
MalI GATC 7 cut(s) 182, 228, 411, 444, 540, 878, 1082
MbiI CCGCTC 1 cut(s) 379
MboI GATC 7 cut(s) 180, 226, 409, 442, 538, 876, 1080
MboII GAAGA 6 cut(s) 134, 226, 627, 721, 1215, 1224
MfeI CAATTG 1 cut(s) 174
MflI RGATCY 2 cut(s) 226, 442
MhlI GDGCHC 2 cut(s) 597, 1105
MlsI TGGCCA 1 cut(s) 1233
MluCI AATT 3 cut(s) 174, 497, 1191
MluNI TGGCCA 1 cut(s) 1233
MlyI GAGTC 1 cut(s) 280
Mox20I TGGCCA 1 cut(s) 1233
MscI TGGCCA 1 cut(s) 1233
MslI CAYNNNNRTG 1 cut(s) 104
Msp20I TGGCCA 1 cut(s) 1233
MspA1I CMGCKG 1 cut(s) 92
MspI CCGG 3 cut(s) 149, 960, 1012
MspR9I CCNGG 8 cut(s) 149, 307, 467, 696, 840, 961, 1013, 1041
MunI CAATTG 1 cut(s) 174
Mva1269I GAATGC 1 cut(s) 403
MvaI CCWGG 5 cut(s) 307, 467, 696, 840, 1041
MvnI CGCG 4 cut(s) 35, 267, 407, 755
MwoI GCNNNNNNNGC 7 cut(s) 230, 341, 467, 650, 761, 1013, 1033
NciI CCSGG 3 cut(s) 149, 961, 1013
NdeII GATC 7 cut(s) 180, 226, 409, 442, 538, 876, 1080
NheI GCTAGC 1 cut(s) 68
NlaIII CATG 3 cut(s) 509, 959, 1150
NlaIV GGNNCC 3 cut(s) 260, 460, 1103
NmeAIII GCCGAG 1 cut(s) 506
NmuCI GTSAC 3 cut(s) 316, 784, 919
NruI TCGCGA 1 cut(s) 755
NspI RCATGY 1 cut(s) 959
OliI CACNNNNGTG 1 cut(s) 104
PaeI GCATGC 1 cut(s) 959
PaeR7I CTCGAG 1 cut(s) 1164
PceI AGGCCT 1 cut(s) 683
PctI GAATGC 1 cut(s) 403
PfeI GAWTC 3 cut(s) 22, 83, 202
PflFI GACNNNGTC 1 cut(s) 772
PfoI TCCNGGA 1 cut(s) 147
PleI GAGTC 1 cut(s) 280
PpsI GAGTC 1 cut(s) 280
Ppu21I YACGTR 1 cut(s) 1054
PpuMI RGGWCCY 1 cut(s) 1127
PshAI GACNNNNGTC 1 cut(s) 791
PsiI TTATAA 1 cut(s) 1173
Psp5II RGGWCCY 1 cut(s) 1127
Psp6I CCWGG 5 cut(s) 305, 465, 694, 838, 1039
PspEI GGTNACC 1 cut(s) 617
PspFI CCCAGC 2 cut(s) 567, 1104
PspGI CCWGG 5 cut(s) 305, 465, 694, 838, 1039
PspN4I GGNNCC 3 cut(s) 260, 460, 1103
PspOMI GGGCCC 1 cut(s) 1101
PspPI GGNCC 6 cut(s) 459, 529, 1043, 1101, 1102, 1127
PspPPI RGGWCCY 1 cut(s) 1127
PspXI VCTCGAGB 1 cut(s) 1164
PstI CTGCAG 1 cut(s) 919
PstNI CAGNNNCTG 3 cut(s) 647, 770, 782
PsuI RGATCY 2 cut(s) 226, 442
PsyI GACNNNGTC 1 cut(s) 772
RruI TCGCGA 1 cut(s) 755
RsaI GTAC 3 cut(s) 800, 1052, 1121
RsaNI GTAC 3 cut(s) 799, 1051, 1120
RseI CAYNNNNRTG 1 cut(s) 104
Sau3AI GATC 7 cut(s) 180, 226, 409, 442, 538, 876, 1080
Sau96I GGNCC 6 cut(s) 459, 529, 1043, 1101, 1102, 1127
SchI GAGTC 1 cut(s) 280
ScrFI CCNGG 8 cut(s) 149, 307, 467, 696, 840, 961, 1013, 1041
SduI GDGCHC 2 cut(s) 597, 1105
SfaNI GCATC 4 cut(s) 437, 510, 1014, 1205
SfcI CTRYAG 2 cut(s) 102, 915
Sfr274I CTCGAG 1 cut(s) 1164
SinI GGWCC 1 cut(s) 1127
SlaI CTCGAG 1 cut(s) 1164
SmiMI CAYNNNNRTG 1 cut(s) 104
SmlI CTYRAG 1 cut(s) 1164
SmoI CTYRAG 1 cut(s) 1164
SphI GCATGC 1 cut(s) 959
Sse9I AATT 3 cut(s) 174, 497, 1191
SseBI AGGCCT 1 cut(s) 683
SspMI CTAG 3 cut(s) 69, 533, 1098
StuI AGGCCT 1 cut(s) 683
StyD4I CCNGG 8 cut(s) 147, 305, 465, 694, 838, 959, 1011, 1039
StyI CCWWGG 3 cut(s) 532, 553, 1097
TaaI ACNGT 1 cut(s) 772
TaiI ACGT 2 cut(s) 1056, 1063
TaqI TCGA 6 cut(s) 29, 273, 722, 858, 896, 1165
TasI AATT 3 cut(s) 174, 497, 1191
TauI GCSGC 4 cut(s) 368, 382, 653, 1221
TfiI GAWTC 3 cut(s) 22, 83, 202
TscAI CASTG 1 cut(s) 924
TseFI GTSAC 3 cut(s) 316, 784, 919
TseI GCWGC 7 cut(s) 277, 310, 362, 653, 931, 989, 1016
Tsp45I GTSAC 3 cut(s) 316, 784, 919
TspDTI ATGAA 2 cut(s) 679, 708
TspGWI ACGGA 3 cut(s) 437, 825, 1224
TspRI CASTG 1 cut(s) 924
Tth111I GACNNNGTC 1 cut(s) 772
VpaK11BI GGWCC 1 cut(s) 1127
XceI RCATGY 1 cut(s) 959
XhoI CTCGAG 1 cut(s) 1164
XmaJI CCTAGG 2 cut(s) 532, 1097
XspI CTAG 3 cut(s) 69, 533, 1098
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.