Rroxscaffold_3G00223520

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000057
Physical Location & Seq
Reverse (-)
6623670 .. 6624893
1224 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00223520.1

Sequence Viewer

Length: 1161 bp
ATGAGGCCGGTACCGAATGATGATGTCCTCGAAGTGCGGGATCTTTGGCACTTCTCTCGTCCGGGAGCTGCTTTCGGATGGTTTGCCAAACTTCGACCGAGAACTGTGGCGATTGGCCCGAGATGGAAAAGCTCTTCCGAGAAACCTTTGGGGCCATTGAGCACGAAGTTGACTTGGCTTCACTCACTCGGATGGCCCAACAGCCTACGTAGTCCGATGTGGCCTATCTTCGGCGCTTCCGGATTCGAAGGCCAAGCCGAACGTCATCTTACCCGAAAAGAAGTTAGTCAAGTTGGCGGTTTGGAACCTCGCCGGCGAAAGAGGCAACATGGCAGCATGATCCAATCAATGGGCGAAATCATCACGGGAGGTGGGCAAAACCGACGCAAGGAAGAATGCGTCCAAGGGGACATATGTACCGGAAAGCATTGCACGGTAGCGGCCCCGAGCTACCAACCAACTACTTATGACCCTTACTACCGACCCCACGGCGAGGAAGTGGTGTCGATGACGATGAGGAAGAAGAGATCGATATCGCGCTACGAACCGATCGCGAAGAAGGATCCGGCCTTGAAGCAACCGAAAATTTCCAAGGAACCGTCAAGCTCAAGTCGATGGCCTTCACCAAACCCGAATTCGCGACATGATCGCCGCGAAGATGGTGAAAACCGACTTCGGACCTTTTCCGCGCCCGGACCAACCGAAAGGGAAGAAATATTGCAAATTTCACAACTTGTGGAATCACAATACAACGGATCGCGTGAAGCTCAAAGACCGATTCGGTATGGCTTAATAATGGCAGCTTGCGGTGGAAGCTCCGCAATGGCGGCAGCGTTGGTGGACCTAAACCCTTTCCCGAGATCGGGATCAATATGGTCGATGTCAACCGGGCTAAAACAGAACCGGAGGAAACCAACCTTGGATTTGAGCACACGGGGGCAAGAAGGAAAATCTGCAGACGATGACACTCCGCAAAGAAGAAAGCTAAACCAGTTGGTCATGCTTCACCCGTGGTCTTATGCTCGTGATGCAAAGAAGAGTGTGGCATCTAAGTGTCATTTGAAGAGAACCGACGGACGTTTCGCTTCGGCTCTCTCCCACCTTTCGAGTGGGCCTCGTCATCGCGGAACTATCGGCCTTCCGGCCCGAAAGAGAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

386

Amino Acids

43.35

Weight (kDa)

10.43

Isoelectric Point (pI)

63.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 10
AccB1I GGYRCC 1 cut(s) 10
AccB7I CCANNNNNTGG 1 cut(s) 349
AccII CGCG 7 cut(s) 538, 554, 640, 654, 689, 760, 1125
AccIII TCCGGA 1 cut(s) 239
AclWI GGATC 6 cut(s) 48, 334, 557, 570, 763, 874
AcsI RAATTY 3 cut(s) 585, 634, 723
AfaI GTAC 2 cut(s) 12, 418
AfiI CCNNNNNNNGG 6 cut(s) 230, 349, 388, 493, 862, 863
AgsI TTSAA 2 cut(s) 574, 1063
AjuI GAANNNNNNNTTGG 4 cut(s) 619, 651, 902, 934
AluBI AGCT 8 cut(s) 68, 132, 450, 606, 767, 803, 816, 985
AluI AGCT 8 cut(s) 68, 132, 450, 606, 767, 803, 816, 985
Alw21I GWGCWC 2 cut(s) 164, 932
AlwI GGATC 6 cut(s) 48, 334, 557, 570, 763, 874
Ama87I CYCGRG 3 cut(s) 118, 445, 856
Aor13HI TCCGGA 1 cut(s) 239
ApeKI GCWGC 4 cut(s) 68, 333, 800, 830
ApoI RAATTY 3 cut(s) 585, 634, 723
ArsI GACNNNNNNTTYG 2 cut(s) 1064, 1096
Asp718I GGTACC 1 cut(s) 10
AspLEI GCGC 3 cut(s) 236, 540, 691
AspS9I GGNCC 9 cut(s) 116, 152, 195, 442, 678, 695, 841, 1112, 1144
AsuC2I CCSGG 3 cut(s) 63, 693, 889
AsuHPI GGTGA 3 cut(s) 615, 674, 998
AsuII TTCGAA 1 cut(s) 246
AvaI CYCGRG 3 cut(s) 118, 445, 856
AvaII GGWCC 3 cut(s) 678, 695, 841
BaeI ACNNNNGTAYC 2 cut(s) 400, 433
BamHI GGATCC 1 cut(s) 562
BanI GGYRCC 1 cut(s) 10
BauI CACGAG 1 cut(s) 1023
Bbv12I GWGCWC 2 cut(s) 164, 932
BbvI GCAGC 4 cut(s) 55, 345, 812, 842
BccI CCATC 5 cut(s) 72, 117, 186, 609, 653
BceAI ACGGC 1 cut(s) 505
BcgI CGANNNNNNTGC 2 cut(s) 38, 72
BcnI CCSGG 3 cut(s) 63, 693, 889
BfmI CTRYAG 1 cut(s) 954
BfoI RGCGCY 1 cut(s) 237
BisI GCNGC 7 cut(s) 69, 334, 441, 652, 801, 828, 831
BlsI GCNGC 7 cut(s) 70, 335, 442, 653, 802, 829, 832
Bme1390I CCNGG 3 cut(s) 63, 693, 889
Bme18I GGWCC 3 cut(s) 678, 695, 841
BmeT110I CYCGRG 3 cut(s) 118, 445, 856
BmgT120I GGNCC 9 cut(s) 116, 152, 195, 442, 678, 695, 841, 1112, 1144
BmiI GGNNCC 6 cut(s) 12, 153, 306, 444, 564, 597
BmrFI CCNGG 3 cut(s) 63, 693, 889
BmsI GCATC 2 cut(s) 1018, 1055
BplI GAGNNNNNCTC 2 cut(s) 1099, 1131
Bpu14I TTCGAA 1 cut(s) 246
BpuEI CTTGAG 1 cut(s) 592
BpuMI CCSGG 3 cut(s) 63, 693, 889
Bsa29I ATCGAT 1 cut(s) 530
BsaAI YACGTR 1 cut(s) 209
BsaBI GATNNNNATC 2 cut(s) 532, 865
BsaJI CCNNGG 5 cut(s) 403, 487, 591, 918, 1010
BsaWI WCCGGW 3 cut(s) 239, 419, 903
Bsc4I CCNNNNNNNGG 6 cut(s) 230, 349, 388, 493, 862, 863
Bse118I RCCGGY 2 cut(s) 7, 312
Bse1I ACTGG 1 cut(s) 991
Bse3DI GCAATG 2 cut(s) 427, 828
Bse8I GATNNNNATC 2 cut(s) 532, 865
BseAI TCCGGA 1 cut(s) 239
BseCI ATCGAT 1 cut(s) 530
BseDI CCNNGG 5 cut(s) 403, 487, 591, 918, 1010
BseGI GGATG 2 cut(s) 83, 197
BseJI GATNNNNATC 2 cut(s) 532, 865
BseLI CCNNNNNNNGG 6 cut(s) 230, 349, 388, 493, 862, 863
BseMI GCAATG 2 cut(s) 427, 828
BseNI ACTGG 1 cut(s) 991
BseXI GCAGC 4 cut(s) 55, 345, 812, 842
Bsh1236I CGCG 7 cut(s) 538, 554, 640, 654, 689, 760, 1125
Bsh1285I CGRYCG 2 cut(s) 98, 552
BshNI GGYRCC 1 cut(s) 10
BshVI ATCGAT 1 cut(s) 530
BsiEI CGRYCG 2 cut(s) 98, 552
BsiHKAI GWGCWC 2 cut(s) 164, 932
BsiHKCI CYCGRG 3 cut(s) 118, 445, 856
BslFI GGGAC 1 cut(s) 422
BslI CCNNNNNNNGG 6 cut(s) 230, 349, 388, 493, 862, 863
BsmFI GGGAC 1 cut(s) 422
BsmI GAATGC 1 cut(s) 401
BsoBI CYCGRG 3 cut(s) 118, 445, 856
Bsp119I TTCGAA 1 cut(s) 246
Bsp1286I GDGCHC 2 cut(s) 164, 932
Bsp13I TCCGGA 1 cut(s) 239
Bsp143I GATC 9 cut(s) 40, 339, 527, 549, 562, 646, 755, 860, 866
Bsp68I TCGCGA 2 cut(s) 554, 640
BspDI ATCGAT 1 cut(s) 530
BspEI TCCGGA 1 cut(s) 239
BspFNI CGCG 7 cut(s) 538, 554, 640, 654, 689, 760, 1125
BspLI GGNNCC 6 cut(s) 12, 153, 306, 444, 564, 597
BspMAI CTGCAG 1 cut(s) 958
BspPI GGATC 6 cut(s) 48, 334, 557, 570, 763, 874
BspQI GCTCTTC 1 cut(s) 139
BspT104I TTCGAA 1 cut(s) 246
BspT107I GGYRCC 1 cut(s) 10
BsrDI GCAATG 2 cut(s) 427, 828
BsrFI RCCGGY 2 cut(s) 7, 312
BsrI ACTGG 1 cut(s) 991
BssAI RCCGGY 2 cut(s) 7, 312
BssECI CCNNGG 5 cut(s) 403, 487, 591, 918, 1010
BssMI GATC 9 cut(s) 40, 339, 527, 549, 562, 646, 755, 860, 866
BssSI CACGAG 1 cut(s) 1023
BssT1I CCWWGG 3 cut(s) 403, 591, 918
Bst2BI CACGAG 1 cut(s) 1023
Bst4CI ACNGT 3 cut(s) 106, 436, 600
Bst6I CTCTTC 4 cut(s) 139, 518, 1031, 1058
BstBAI YACGTR 1 cut(s) 209
BstBI TTCGAA 1 cut(s) 246
BstC8I GCNNGC 2 cut(s) 314, 805
BstDEI CTNAG 1 cut(s) 1050
BstDSI CCRYGG 2 cut(s) 487, 1010
BstF5I GGATG 2 cut(s) 83, 197
BstFNI CGCG 7 cut(s) 538, 554, 640, 654, 689, 760, 1125
BstH2I RGCGCY 1 cut(s) 237
BstHHI GCGC 3 cut(s) 236, 540, 691
BstKTI GATC 9 cut(s) 43, 342, 530, 552, 565, 649, 758, 863, 869
BstMBI GATC 9 cut(s) 40, 339, 527, 549, 562, 646, 755, 860, 866
BstMCI CGRYCG 2 cut(s) 98, 552
BstMWI GCNNNNNNNGC 4 cut(s) 322, 813, 827, 1028
BstSCI CCNGG 3 cut(s) 61, 691, 887
BstSFI CTRYAG 1 cut(s) 954
BstSNI TACGTA 1 cut(s) 209
BstUI CGCG 7 cut(s) 538, 554, 640, 654, 689, 760, 1125
BstV1I GCAGC 4 cut(s) 55, 345, 812, 842
BstX2I RGATCY 2 cut(s) 40, 562
BstYI RGATCY 2 cut(s) 40, 562
Bsu15I ATCGAT 1 cut(s) 530
BsuTUI ATCGAT 1 cut(s) 530
BtgI CCRYGG 2 cut(s) 487, 1010
BtgZI GCGATG 1 cut(s) 1106
BtsCI GGATG 2 cut(s) 83, 197
BtuMI TCGCGA 2 cut(s) 554, 640
Cac8I GCNNGC 2 cut(s) 314, 805
CfoI GCGC 3 cut(s) 236, 540, 691
Cfr10I RCCGGY 2 cut(s) 7, 312
Cfr13I GGNCC 9 cut(s) 116, 152, 195, 442, 678, 695, 841, 1112, 1144
ClaI ATCGAT 1 cut(s) 530
CseI GACGC 2 cut(s) 388, 393
Csp6I GTAC 2 cut(s) 11, 417
CviAII CATG 4 cut(s) 329, 337, 644, 1000
CviQI GTAC 2 cut(s) 11, 417
DdeI CTNAG 1 cut(s) 1050
DpnI GATC 9 cut(s) 42, 341, 529, 551, 564, 648, 757, 862, 868
DpnII GATC 9 cut(s) 40, 339, 527, 549, 562, 646, 755, 860, 866
Eam1104I CTCTTC 4 cut(s) 139, 518, 1031, 1058
EarI CTCTTC 4 cut(s) 139, 518, 1031, 1058
Eco105I TACGTA 1 cut(s) 209
Eco130I CCWWGG 3 cut(s) 403, 591, 918
Eco32I GATATC 1 cut(s) 534
Eco47I GGWCC 3 cut(s) 678, 695, 841
Eco88I CYCGRG 3 cut(s) 118, 445, 856
EcoRI GAATTC 1 cut(s) 634
EcoRV GATATC 1 cut(s) 534
EcoT14I CCWWGG 3 cut(s) 403, 591, 918
ErhI CCWWGG 3 cut(s) 403, 591, 918
FaeI CATG 4 cut(s) 332, 340, 647, 1003
FaqI GGGAC 1 cut(s) 422
FatI CATG 4 cut(s) 328, 336, 643, 999
FauI CCCGC 1 cut(s) 30
FauNDI CATATG 1 cut(s) 413
Fnu4HI GCNGC 7 cut(s) 69, 334, 441, 652, 801, 828, 831
FokI GGATG 2 cut(s) 90, 204
Fsp4HI GCNGC 7 cut(s) 69, 334, 441, 652, 801, 828, 831
GlaI GCGC 3 cut(s) 235, 539, 690
GluI GCNGC 7 cut(s) 69, 334, 441, 652, 801, 828, 831
HaeII RGCGCY 1 cut(s) 237
HgaI GACGC 2 cut(s) 388, 393
HhaI GCGC 3 cut(s) 236, 540, 691
Hin1II CATG 4 cut(s) 332, 340, 647, 1003
Hin6I GCGC 3 cut(s) 234, 538, 689
HinP1I GCGC 3 cut(s) 234, 538, 689
HincII GTYRAC 2 cut(s) 171, 885
HindII GTYRAC 2 cut(s) 171, 885
HinfI GANTC 3 cut(s) 243, 740, 778
HphI GGTGA 3 cut(s) 615, 674, 998
Hpy166II GTNNAC 3 cut(s) 171, 841, 885
Hpy188I TCNGA 5 cut(s) 77, 139, 191, 216, 678
Hpy188III TCNNGA 6 cut(s) 240, 553, 639, 856, 864, 1025
Hpy8I GTNNAC 3 cut(s) 171, 841, 885
Hpy99I CGWCG 2 cut(s) 387, 1076
HpyAV CCTTC 5 cut(s) 242, 553, 630, 938, 1148
HpyCH4III ACNGT 3 cut(s) 106, 436, 600
HpyCH4IV ACGT 3 cut(s) 208, 262, 1078
HpyCH4V TGCA 4 cut(s) 432, 721, 956, 1031
HpyF10VI GCNNNNNNNGC 4 cut(s) 322, 813, 827, 1028
HpyF3I CTNAG 1 cut(s) 1050
HpySE526I ACGT 3 cut(s) 208, 262, 1078
Hsp92II CATG 4 cut(s) 332, 340, 647, 1003
HspAI GCGC 3 cut(s) 234, 538, 689
Kpn2I TCCGGA 1 cut(s) 239
KpnI GGTACC 1 cut(s) 14
KroI GCCGGC 1 cut(s) 312
KroNI GCCGGC 1 cut(s) 314
Kzo9I GATC 9 cut(s) 40, 339, 527, 549, 562, 646, 755, 860, 866
LguI GCTCTTC 1 cut(s) 139
LmnI GCTCC 2 cut(s) 65, 821
Lsp1109I GCAGC 4 cut(s) 55, 345, 812, 842
LweI GCATC 2 cut(s) 1018, 1055
MaeII ACGT 3 cut(s) 208, 262, 1078
MalI GATC 9 cut(s) 42, 341, 529, 551, 564, 648, 757, 862, 868
MboI GATC 9 cut(s) 40, 339, 527, 549, 562, 646, 755, 860, 866
MflI RGATCY 2 cut(s) 40, 562
MhlI GDGCHC 2 cut(s) 164, 932
MluCI AATT 3 cut(s) 585, 634, 723
MnlI CCTC 8 cut(s) 38, 315, 318, 362, 487, 510, 900, 1125
MreI CGCCGGCG 1 cut(s) 312
MroI TCCGGA 1 cut(s) 239
MroNI GCCGGC 1 cut(s) 312
MseI TTAA 1 cut(s) 791
MslI CAYNNNNRTG 2 cut(s) 190, 1051
MspR9I CCNGG 3 cut(s) 63, 693, 889
Mva1269I GAATGC 1 cut(s) 401
MvnI CGCG 7 cut(s) 538, 554, 640, 654, 689, 760, 1125
MwoI GCNNNNNNNGC 4 cut(s) 322, 813, 827, 1028
NaeI GCCGGC 1 cut(s) 314
NciI CCSGG 3 cut(s) 63, 693, 889
NdeI CATATG 1 cut(s) 413
NdeII GATC 9 cut(s) 40, 339, 527, 549, 562, 646, 755, 860, 866
NgoMIV GCCGGC 1 cut(s) 312
NlaIII CATG 4 cut(s) 332, 340, 647, 1003
NlaIV GGNNCC 6 cut(s) 12, 153, 306, 444, 564, 597
NruI TCGCGA 2 cut(s) 554, 640
NspV TTCGAA 1 cut(s) 246
PciSI GCTCTTC 1 cut(s) 139
PctI GAATGC 1 cut(s) 401
PdiI GCCGGC 1 cut(s) 314
PfeI GAWTC 3 cut(s) 243, 740, 778
PflMI CCANNNNNTGG 1 cut(s) 349
PfoI TCCNGGA 1 cut(s) 61
PkrI GCNGC 7 cut(s) 70, 335, 442, 653, 802, 829, 832
Ple19I CGATCG 1 cut(s) 552
Ppu21I YACGTR 1 cut(s) 209
PspN4I GGNNCC 6 cut(s) 12, 153, 306, 444, 564, 597
PspPI GGNCC 9 cut(s) 116, 152, 195, 442, 678, 695, 841, 1112, 1144
PstI CTGCAG 1 cut(s) 958
PsuI RGATCY 2 cut(s) 40, 562
PvuI CGATCG 1 cut(s) 552
RruI TCGCGA 2 cut(s) 554, 640
RsaI GTAC 2 cut(s) 12, 418
RsaNI GTAC 2 cut(s) 11, 417
RseI CAYNNNNRTG 2 cut(s) 190, 1051
SapI GCTCTTC 1 cut(s) 139
SaqAI TTAA 1 cut(s) 791
SatI GCNGC 7 cut(s) 69, 334, 441, 652, 801, 828, 831
Sau3AI GATC 9 cut(s) 40, 339, 527, 549, 562, 646, 755, 860, 866
Sau96I GGNCC 9 cut(s) 116, 152, 195, 442, 678, 695, 841, 1112, 1144
ScrFI CCNGG 3 cut(s) 63, 693, 889
SduI GDGCHC 2 cut(s) 164, 932
SfaNI GCATC 2 cut(s) 1018, 1055
SfcI CTRYAG 1 cut(s) 954
SfuI TTCGAA 1 cut(s) 246
SgrAI CRCCGGYG 1 cut(s) 312
SinI GGWCC 3 cut(s) 678, 695, 841
SmiMI CAYNNNNRTG 2 cut(s) 190, 1051
SmlI CTYRAG 1 cut(s) 607
SmoI CTYRAG 1 cut(s) 607
SnaBI TACGTA 1 cut(s) 209
Sse9I AATT 3 cut(s) 585, 634, 723
SspI AATATT 1 cut(s) 717
StyD4I CCNGG 3 cut(s) 61, 691, 887
StyI CCWWGG 3 cut(s) 403, 591, 918
TaaI ACNGT 3 cut(s) 106, 436, 600
TaiI ACGT 3 cut(s) 211, 265, 1081
TaqI TCGA 8 cut(s) 30, 94, 246, 506, 530, 613, 878, 1106
TaqII GACCGA 2 cut(s) 112, 790
TasI AATT 3 cut(s) 585, 634, 723
TauI GCSGC 3 cut(s) 443, 654, 830
TfiI GAWTC 3 cut(s) 243, 740, 778
Tru1I TTAA 1 cut(s) 791
Tru9I TTAA 1 cut(s) 791
TseI GCWGC 4 cut(s) 68, 333, 800, 830
TspGWI ACGGA 2 cut(s) 768, 1089
Van91I CCANNNNNTGG 1 cut(s) 349
VpaK11BI GGWCC 3 cut(s) 678, 695, 841
XapI RAATTY 3 cut(s) 585, 634, 723
XcmI CCANNNNNNNNNTGG 1 cut(s) 1106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.