Rmu_sc0002587.1_g000037

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002587.1
OG0000057
Physical Location & Seq
Reverse (-)
102642 .. 105232
2591 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002587.1_g000037.1.cds

Sequence Viewer

Length: 1401 bp
atggcaaggaatagtcgaaaccctaggtataaataccaggaaaagagccttgtgacgagtttggtgctctcctcgtccacaacgcttgatcaagaagtcaggtcaagggacgccccgacgactgcaccccacggtgctggcacgctcgctcattcaaaagagacagcaagtgagcctgtcaacactatcgttgtttctgatgccgcggaaagtgaagaaatagaggctttcattccgaagcctattccagaggaagtgaccttcgaggaaaaactcgcgatcattatggagaatatcgagaaccatcgtgcaaaggagaatgcagtaagggcccatgccagaggtatcgctaatgagcagagtcaacatcaaaaagaaattatgaaagctatcgcgagccaaaccaagcagactgcgtcagatttggcaggtcttcgcaaggatggttctaatcttgcaacagaggtcgccatgaagatagccgaattgaaccaggctaaagaaccctctggttctggtaagtatataccaccaaaagctcgcgagaaggctagcagcagtacggccacacctcctgcaacggctactgccgcatcaaccaaaaataaggaaagagctttggtgattggtggtaataaggctgctccatcagcctcacaaaaggataagatccagaagactggtgatggtactccagctgatcctgtagtgtttactcagtacgacagcgacggggcggaaaatgtctaccatgaactcccatacaattactacgacattgaccagacaggcaaccccgtcaagataacagcgttggtcaagaatgcgcccataccagaggttgctcaccagactgtggcgaatcctcctcctcctcctggtccagagtatgtgagacgtgaagaggtagaggagattatcaggctggctaaccctagggcccaaatggatggggggaggacactgagaacgcggaaactcatctggccaggttcagggtgcaatgaggccaataccagaatgatgacatcctcaagtgcaggatctctggcacttctctttctggagcagcctttagatgcgatcaagggtttagaacagcgccaacgaaagaagcaacatggcagcatgatccagtcaatgggagaactgatcacagaggtgggtagctttgagcatttcctcagagagactgatgcaaggaaaaatgcatccaaaggaacatatgtgccagggaaacaccgcacagtggcagctcttggatacctacaaccaacctatgatccttactatcaccatcaaggggaagagattttccagggtgaagatgaagctgaagaagaggagaacgacgtctccgagctagagttgacaggtaggaagaattcaaccctcaagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

466

Amino Acids

50.98

Weight (kDa)

5.93

Isoelectric Point (pI)

44.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1356
Acc36I ACCTGC 1 cut(s) 419
AccB7I CCANNNNNTGG 2 cut(s) 856, 1141
AccI GTMKAC 1 cut(s) 747
AccII CGCG 5 cut(s) 206, 278, 395, 543, 973
AciI CCGC 6 cut(s) 204, 206, 591, 737, 973, 1243
AclWI GGATC 5 cut(s) 664, 695, 1051, 1126, 1277
AcoI YGGCCR 2 cut(s) 564, 986
AcsI RAATTY 1 cut(s) 1384
AcuI CTGAAG 1 cut(s) 1356
AcyI GRCGYC 2 cut(s) 111, 1353
AfaI GTAC 3 cut(s) 562, 691, 722
AfiI CCNNNNNNNGG 6 cut(s) 856, 878, 995, 1141, 1249, 1303
AgsI TTSAA 3 cut(s) 156, 490, 1389
AjiI CACGTC 1 cut(s) 899
AjnI CCWGG 6 cut(s) 36, 492, 877, 988, 1231, 1317
AleI CACNNNNGTG 1 cut(s) 1160
AloI GAACNNNNNNTCC 2 cut(s) 1340, 1372
AluBI AGCT 8 cut(s) 389, 539, 617, 698, 1170, 1256, 1334, 1363
AluI AGCT 8 cut(s) 389, 539, 617, 698, 1170, 1256, 1334, 1363
Alw21I GWGCWC 1 cut(s) 69
Alw26I GTCTC 4 cut(s) 155, 889, 1184, 1360
AlwI GGATC 5 cut(s) 664, 695, 1051, 1126, 1277
AoxI GGCC 5 cut(s) 330, 564, 939, 986, 1008
ApaI GGGCCC 2 cut(s) 334, 943
ApeKI GCWGC 5 cut(s) 555, 641, 1069, 1125, 1253
ApoI RAATTY 1 cut(s) 1384
AspA2I CCTAGG 2 cut(s) 23, 935
AspLEI GCGC 2 cut(s) 829, 1104
AspS9I GGNCC 5 cut(s) 330, 331, 881, 939, 940
AsuHPI GGTGA 5 cut(s) 634, 695, 839, 1286, 1334
AsuNHI GCTAGC 1 cut(s) 551
AvaII GGWCC 1 cut(s) 881
AvrII CCTAGG 2 cut(s) 23, 935
BaeGI GKGCMC 2 cut(s) 334, 943
BalI TGGCCA 1 cut(s) 988
BanII GRGCYC 2 cut(s) 334, 943
BbsI GAAGAC 2 cut(s) 425, 683
Bbv12I GWGCWC 1 cut(s) 69
BbvI GCAGC 5 cut(s) 567, 628, 1081, 1137, 1265
BccI CCATC 6 cut(s) 312, 437, 655, 680, 944, 1305
BceAI ACGGC 2 cut(s) 579, 597
BcgI CGANNNNNNTGC 2 cut(s) 46, 80
BciT130I CCWGG 6 cut(s) 38, 494, 879, 990, 1233, 1319
BciVI GTATCC 1 cut(s) 1256
BclI TGATCA 2 cut(s) 88, 1152
BcoDI GTCTC 4 cut(s) 155, 889, 1184, 1360
BfaI CTAG 4 cut(s) 24, 552, 936, 1364
BfmI CTRYAG 1 cut(s) 705
BfoI RGCGCY 1 cut(s) 1105
BfuAI ACCTGC 1 cut(s) 419
BfuI GTATCC 1 cut(s) 1256
BisI GCNGC 7 cut(s) 204, 556, 591, 642, 1070, 1126, 1254
BlnI CCTAGG 2 cut(s) 23, 935
BlsI GCNGC 7 cut(s) 205, 557, 592, 643, 1071, 1127, 1255
Bme1390I CCNGG 6 cut(s) 38, 494, 879, 990, 1233, 1319
Bme18I GGWCC 1 cut(s) 881
BmgBI CACGTC 1 cut(s) 899
BmgT120I GGNCC 5 cut(s) 330, 331, 881, 939, 940
BmiI GGNNCC 2 cut(s) 332, 941
BmrFI CCNGG 6 cut(s) 38, 494, 879, 990, 1233, 1319
BmsI GCATC 5 cut(s) 190, 602, 1069, 1186, 1220
BmtI GCTAGC 1 cut(s) 555
BpiI GAAGAC 2 cut(s) 425, 683
BpmI CTGGAG 2 cut(s) 678, 1085
BpuEI CTTGAG 2 cut(s) 1018, 1379
BsaHI GRCGYC 2 cut(s) 111, 1353
BsaJI CCNNGG 6 cut(s) 23, 130, 204, 935, 1232, 1318
BsaXI ACNNNNNCTCC 2 cut(s) 1340, 1370
Bsc4I CCNNNNNNNGG 6 cut(s) 856, 878, 995, 1141, 1249, 1303
Bse1I ACTGG 2 cut(s) 685, 1135
Bse3DI GCAATG 1 cut(s) 1009
BseBI CCWGG 6 cut(s) 38, 494, 879, 990, 1233, 1319
BseDI CCNNGG 6 cut(s) 23, 130, 204, 935, 1232, 1318
BseGI GGATG 4 cut(s) 448, 955, 1028, 1211
BseLI CCNNNNNNNGG 6 cut(s) 856, 878, 995, 1141, 1249, 1303
BseMI GCAATG 1 cut(s) 1009
BseMII CTCAG 3 cut(s) 731, 956, 1198
BseNI ACTGG 2 cut(s) 685, 1135
BseRI GAGGAG 6 cut(s) 61, 858, 861, 864, 926, 1358
BseSI GKGCMC 2 cut(s) 334, 943
BseXI GCAGC 5 cut(s) 567, 628, 1081, 1137, 1265
BsgI GTGCAG 2 cut(s) 108, 1059
Bsh1236I CGCG 5 cut(s) 206, 278, 395, 543, 973
BshFI GGCC 5 cut(s) 332, 566, 941, 988, 1010
BsiHKAI GWGCWC 1 cut(s) 69
BslFI GGGAC 1 cut(s) 122
BslI CCNNNNNNNGG 6 cut(s) 856, 878, 995, 1141, 1249, 1303
BsmAI GTCTC 4 cut(s) 155, 889, 1184, 1360
BsmBI CGTCTC 2 cut(s) 889, 1360
BsmFI GGGAC 1 cut(s) 122
BsmI GAATGC 2 cut(s) 325, 829
BsnI GGCC 5 cut(s) 332, 566, 941, 988, 1010
Bsp120I GGGCCC 2 cut(s) 330, 939
Bsp1286I GDGCHC 3 cut(s) 69, 334, 943
Bsp143I GATC 9 cut(s) 88, 279, 669, 700, 1043, 1083, 1131, 1152, 1282
Bsp68I TCGCGA 3 cut(s) 278, 395, 543
BspACI CCGC 6 cut(s) 204, 206, 591, 737, 973, 1243
BspANI GGCC 5 cut(s) 332, 566, 941, 988, 1010
BspCNI CTCAG 3 cut(s) 730, 957, 1197
BspFNI CGCG 5 cut(s) 206, 278, 395, 543, 973
BspLI GGNNCC 2 cut(s) 332, 941
BspMI ACCTGC 1 cut(s) 419
BspOI GCTAGC 1 cut(s) 555
BspPI GGATC 5 cut(s) 664, 695, 1051, 1126, 1277
BsrDI GCAATG 1 cut(s) 1009
BsrI ACTGG 2 cut(s) 685, 1135
BssECI CCNNGG 6 cut(s) 23, 130, 204, 935, 1232, 1318
BssMI GATC 9 cut(s) 88, 279, 669, 700, 1043, 1083, 1131, 1152, 1282
BssNI GRCGYC 2 cut(s) 111, 1353
BssT1I CCWWGG 2 cut(s) 23, 935
Bst2UI CCWGG 6 cut(s) 38, 494, 879, 990, 1233, 1319
Bst4CI ACNGT 3 cut(s) 134, 856, 1249
Bst6I CTCTTC 3 cut(s) 897, 1302, 1335
BstACI GRCGYC 2 cut(s) 111, 1353
BstC8I GCNNGC 7 cut(s) 139, 143, 147, 397, 541, 553, 927
BstDEI CTNAG 3 cut(s) 717, 965, 1184
BstDSI CCRYGG 2 cut(s) 130, 204
BstF5I GGATG 4 cut(s) 448, 955, 1028, 1211
BstFNI CGCG 5 cut(s) 206, 278, 395, 543, 973
BstH2I RGCGCY 1 cut(s) 1105
BstHHI GCGC 2 cut(s) 829, 1104
BstKTI GATC 9 cut(s) 91, 282, 672, 703, 1046, 1086, 1134, 1155, 1285
BstMAI GTCTC 4 cut(s) 155, 889, 1184, 1360
BstMBI GATC 9 cut(s) 88, 279, 669, 700, 1043, 1083, 1131, 1152, 1282
BstMWI GCNNNNNNNGC 3 cut(s) 329, 590, 650
BstNI CCWGG 6 cut(s) 38, 494, 879, 990, 1233, 1319
BstSCI CCNGG 6 cut(s) 36, 492, 877, 988, 1231, 1317
BstSFI CTRYAG 1 cut(s) 705
BstSLI GKGCMC 2 cut(s) 334, 943
BstUI CGCG 5 cut(s) 206, 278, 395, 543, 973
BstV1I GCAGC 5 cut(s) 567, 628, 1081, 1137, 1265
BstV2I GAAGAC 2 cut(s) 425, 683
BstX2I RGATCY 2 cut(s) 669, 1043
BstXI CCANNNNNNTGG 3 cut(s) 137, 680, 950
BstYI RGATCY 2 cut(s) 669, 1043
BsuI GTATCC 1 cut(s) 1256
BsuRI GGCC 5 cut(s) 332, 566, 941, 988, 1010
BtgI CCRYGG 2 cut(s) 130, 204
BtrI CACGTC 1 cut(s) 899
BtsCI GGATG 4 cut(s) 448, 955, 1028, 1211
BtsIMutI CAGTG 2 cut(s) 962, 1254
BtuMI TCGCGA 3 cut(s) 278, 395, 543
BveI ACCTGC 1 cut(s) 419
Cac8I GCNNGC 7 cut(s) 139, 143, 147, 397, 541, 553, 927
CfoI GCGC 2 cut(s) 829, 1104
Cfr13I GGNCC 5 cut(s) 330, 331, 881, 939, 940
Cfr42I CCGCGG 1 cut(s) 207
CseI GACGC 2 cut(s) 119, 405
Csp6I GTAC 3 cut(s) 561, 690, 721
CspCI CAANNNNNGTGG 2 cut(s) 67, 102
CviAII CATG 5 cut(s) 335, 472, 752, 1121, 1129
CviQI GTAC 3 cut(s) 561, 690, 721
DdeI CTNAG 3 cut(s) 717, 965, 1184
DpnI GATC 9 cut(s) 90, 281, 671, 702, 1045, 1085, 1133, 1154, 1284
DpnII GATC 9 cut(s) 88, 279, 669, 700, 1043, 1083, 1131, 1152, 1282
EaeI YGGCCR 2 cut(s) 564, 986
Eam1104I CTCTTC 3 cut(s) 897, 1302, 1335
EarI CTCTTC 3 cut(s) 897, 1302, 1335
EciI GGCGGA 1 cut(s) 752
Eco130I CCWWGG 2 cut(s) 23, 935
Eco24I GRGCYC 2 cut(s) 334, 943
Eco47I GGWCC 1 cut(s) 881
Eco57I CTGAAG 1 cut(s) 1356
EcoO109I RGGNCCY 2 cut(s) 330, 939
EcoRI GAATTC 1 cut(s) 1384
EcoRII CCWGG 6 cut(s) 36, 492, 877, 988, 1231, 1317
EcoT14I CCWWGG 2 cut(s) 23, 935
EcoT22I ATGCAT 1 cut(s) 1213
EcoT38I GRGCYC 2 cut(s) 334, 943
ErhI CCWWGG 2 cut(s) 23, 935
Esp3I CGTCTC 2 cut(s) 889, 1360
FaeI CATG 5 cut(s) 338, 475, 755, 1124, 1132
FaqI GGGAC 1 cut(s) 122
FatI CATG 5 cut(s) 334, 471, 751, 1120, 1128
FauNDI CATATG 1 cut(s) 1225
FbaI TGATCA 2 cut(s) 88, 1152
FblI GTMKAC 1 cut(s) 747
Fnu4HI GCNGC 7 cut(s) 204, 556, 591, 642, 1070, 1126, 1254
FokI GGATG 4 cut(s) 455, 962, 1015, 1198
FriOI GRGCYC 2 cut(s) 334, 943
Fsp4HI GCNGC 7 cut(s) 204, 556, 591, 642, 1070, 1126, 1254
FspBI CTAG 4 cut(s) 24, 552, 936, 1364
GlaI GCGC 2 cut(s) 828, 1103
GluI GCNGC 7 cut(s) 204, 556, 591, 642, 1070, 1126, 1254
GsuI CTGGAG 2 cut(s) 678, 1085
HaeII RGCGCY 1 cut(s) 1105
HaeIII GGCC 5 cut(s) 332, 566, 941, 988, 1010
HgaI GACGC 2 cut(s) 119, 405
HhaI GCGC 2 cut(s) 829, 1104
Hin1I GRCGYC 2 cut(s) 111, 1353
Hin1II CATG 5 cut(s) 338, 475, 755, 1124, 1132
Hin6I GCGC 2 cut(s) 827, 1102
HinP1I GCGC 2 cut(s) 827, 1102
HincII GTYRAC 3 cut(s) 181, 365, 1371
HindII GTYRAC 3 cut(s) 181, 365, 1371
HinfI GANTC 2 cut(s) 361, 862
HphI GGTGA 5 cut(s) 634, 695, 839, 1286, 1334
Hpy166II GTNNAC 6 cut(s) 78, 181, 365, 714, 748, 1371
Hpy188I TCNGA 5 cut(s) 199, 237, 421, 1187, 1360
Hpy8I GTNNAC 6 cut(s) 78, 181, 365, 714, 748, 1371
Hpy99I CGWCG 3 cut(s) 121, 734, 1355
HpyAV CCTTC 2 cut(s) 271, 541
HpyCH4III ACNGT 3 cut(s) 134, 856, 1249
HpyCH4IV ACGT 2 cut(s) 898, 1353
HpyCH4V TGCA 9 cut(s) 125, 311, 323, 458, 578, 1002, 1040, 1199, 1211
HpyF10VI GCNNNNNNNGC 3 cut(s) 329, 590, 650
HpyF3I CTNAG 3 cut(s) 717, 965, 1184
HpySE526I ACGT 2 cut(s) 898, 1353
Hsp92I GRCGYC 2 cut(s) 111, 1353
Hsp92II CATG 5 cut(s) 338, 475, 755, 1124, 1132
HspAI GCGC 2 cut(s) 827, 1102
Ksp22I TGATCA 2 cut(s) 88, 1152
KspI CCGCGG 1 cut(s) 207
Kzo9I GATC 9 cut(s) 88, 279, 669, 700, 1043, 1083, 1131, 1152, 1282
LmnI GCTCC 2 cut(s) 649, 1066
Lsp1109I GCAGC 5 cut(s) 567, 628, 1081, 1137, 1265
LweI GCATC 5 cut(s) 190, 602, 1069, 1186, 1220
MaeI CTAG 4 cut(s) 24, 552, 936, 1364
MaeII ACGT 2 cut(s) 898, 1353
MaeIII GTNAC 2 cut(s) 52, 256
MalI GATC 9 cut(s) 90, 281, 671, 702, 1045, 1085, 1133, 1154, 1284
MboI GATC 9 cut(s) 88, 279, 669, 700, 1043, 1083, 1131, 1152, 1282
MflI RGATCY 2 cut(s) 669, 1043
MhlI GDGCHC 3 cut(s) 69, 334, 943
MlsI TGGCCA 1 cut(s) 988
MluCI AATT 4 cut(s) 378, 485, 766, 1384
MluNI TGGCCA 1 cut(s) 988
MlyI GAGTC 1 cut(s) 370
Mox20I TGGCCA 1 cut(s) 988
Mph1103I ATGCAT 1 cut(s) 1213
MscI TGGCCA 1 cut(s) 988
MslI CAYNNNNRTG 1 cut(s) 1160
Msp20I TGGCCA 1 cut(s) 988
MspA1I CMGCKG 2 cut(s) 206, 698
MspR9I CCNGG 6 cut(s) 38, 494, 879, 990, 1233, 1319
Mva1269I GAATGC 2 cut(s) 325, 829
MvaI CCWGG 6 cut(s) 38, 494, 879, 990, 1233, 1319
MvnI CGCG 5 cut(s) 206, 278, 395, 543, 973
MwoI GCNNNNNNNGC 3 cut(s) 329, 590, 650
NdeI CATATG 1 cut(s) 1225
NdeII GATC 9 cut(s) 88, 279, 669, 700, 1043, 1083, 1131, 1152, 1282
NheI GCTAGC 1 cut(s) 551
NlaIII CATG 5 cut(s) 338, 475, 755, 1124, 1132
NlaIV GGNNCC 2 cut(s) 332, 941
NmuCI GTSAC 2 cut(s) 52, 256
NruI TCGCGA 3 cut(s) 278, 395, 543
NsiI ATGCAT 1 cut(s) 1213
OliI CACNNNNGTG 1 cut(s) 1160
PcsI WCGNNNNNNNCGW 1 cut(s) 1356
PctI GAATGC 2 cut(s) 325, 829
PfeI GAWTC 1 cut(s) 862
PflFI GACNNNGTC 1 cut(s) 415
PflMI CCANNNNNTGG 2 cut(s) 856, 1141
PkrI GCNGC 7 cut(s) 205, 557, 592, 643, 1071, 1127, 1255
PleI GAGTC 1 cut(s) 369
PpsI GAGTC 1 cut(s) 369
Psp6I CCWGG 6 cut(s) 36, 492, 877, 988, 1231, 1317
PspGI CCWGG 6 cut(s) 36, 492, 877, 988, 1231, 1317
PspN4I GGNNCC 2 cut(s) 332, 941
PspOMI GGGCCC 2 cut(s) 330, 939
PspPI GGNCC 5 cut(s) 330, 331, 881, 939, 940
PsuI RGATCY 2 cut(s) 669, 1043
PsyI GACNNNGTC 1 cut(s) 415
PvuII CAGCTG 1 cut(s) 698
RruI TCGCGA 3 cut(s) 278, 395, 543
RsaI GTAC 3 cut(s) 562, 691, 722
RsaNI GTAC 3 cut(s) 561, 690, 721
RseI CAYNNNNRTG 1 cut(s) 1160
SacII CCGCGG 1 cut(s) 207
SatI GCNGC 7 cut(s) 204, 556, 591, 642, 1070, 1126, 1254
Sau3AI GATC 9 cut(s) 88, 279, 669, 700, 1043, 1083, 1131, 1152, 1282
Sau96I GGNCC 5 cut(s) 330, 331, 881, 939, 940
SchI GAGTC 1 cut(s) 370
ScrFI CCNGG 6 cut(s) 38, 494, 879, 990, 1233, 1319
SduI GDGCHC 3 cut(s) 69, 334, 943
SfaNI GCATC 5 cut(s) 190, 602, 1069, 1186, 1220
SfcI CTRYAG 1 cut(s) 705
Sfr303I CCGCGG 1 cut(s) 207
SgrBI CCGCGG 1 cut(s) 207
SinI GGWCC 1 cut(s) 881
SmiMI CAYNNNNRTG 1 cut(s) 1160
SmlI CTYRAG 2 cut(s) 1033, 1394
SmoI CTYRAG 2 cut(s) 1033, 1394
Sse9I AATT 4 cut(s) 378, 485, 766, 1384
SsiI CCGC 6 cut(s) 204, 206, 591, 737, 973, 1243
SspMI CTAG 4 cut(s) 24, 552, 936, 1364
StyD4I CCNGG 6 cut(s) 36, 492, 877, 988, 1231, 1317
StyI CCWWGG 2 cut(s) 23, 935
TaaI ACNGT 3 cut(s) 134, 856, 1249
TaiI ACGT 2 cut(s) 901, 1356
TaqI TCGA 3 cut(s) 16, 264, 297
TasI AATT 4 cut(s) 378, 485, 766, 1384
TauI GCSGC 2 cut(s) 206, 593
TfiI GAWTC 1 cut(s) 862
TscAI CASTG 2 cut(s) 969, 1254
TseFI GTSAC 2 cut(s) 52, 256
TseI GCWGC 5 cut(s) 555, 641, 1069, 1125, 1253
Tsp45I GTSAC 2 cut(s) 52, 256
TspDTI ATGAA 5 cut(s) 220, 398, 488, 768, 1344
TspRI CASTG 2 cut(s) 969, 1254
Tth111I GACNNNGTC 1 cut(s) 415
Van91I CCANNNNNTGG 2 cut(s) 856, 1141
VpaK11BI GGWCC 1 cut(s) 881
XapI RAATTY 1 cut(s) 1384
XmaJI CCTAGG 2 cut(s) 23, 935
XmiI GTMKAC 1 cut(s) 747
XspI CTAG 4 cut(s) 24, 552, 936, 1364
ZraI GACGTC 1 cut(s) 1354
Zsp2I ATGCAT 1 cut(s) 1213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.