Rroxscaffold_174G00435300

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000174
OG0000057
Physical Location & Seq
Reverse (-)
329057 .. 329956
900 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_174G00435300.1

Sequence Viewer

Length: 882 bp
ATGCGGCAACCCATCCGGCTAGATTTAGGGTACGGTGTGGCCAATATCGGAATGATGACGTCCTCGAAGTGCGGGATCTTTGGCACTTCCCTATCCGGCGCCGCCTTCGTATGGTTTTCTAAACTTAGGCCGGGGGACGGTGGCGGATTGGCCCGGCAATGGAACTACTTTTCCGTGAGACATTTGGGAACATTGAGCCGAAGTGGATCTAGCCTCGCTTACTCGATGGCCCGGCAGCCTACGGAATCGGCAGCTCTTATCTTCGGGCGCTTTCAAATCCGAAGGCCAAACCGAATGTCATTCTCGCCCGAGAAGGAGTTGGTTAAGCTATCGGTCAAAGGCCTAGAGCCCCGACAAAGAAAGCGACATGGCGGCATGATACGGTCGATGGGAGAACTCATCACGGAGGTAGGCGCTTTTGAGCATCTCCTTAGAGAGACGACGCAAGGAAGAATGCTTCCAAAGGAACGTACGTGCCGCGGCCCCGAGCTACCAGCCGACCACTTACGATCCTTATTACCATCACGGTTCGGAGAAGTGAGCCAGGACGATGAAGAGGATGAGGATAATGACATAGCCGCCTATGAACCGACCGGGAAGAAGAACTCGTCCTTGAAACAGTTGAAGATTTCCAAGGAGCCCGTTAAGCTCGAGTCAATGGCCTTCACTAAGCCGGAGTTCGCGACATATACCTACGATGCCAATAAAGCTCACGAGATTCTCGACGAGATGATTGCCGCGAAGATGGTGAAAGACCGATTTCGGGTCGTTTCGCGACCGGAGCGATTGAAGGGAAAGAAATACCGCAAATTCCATAACCTTTGGAACCACAACACGCAGGAGACTGCGTCAAGCTCAAGGACCAAATTCGGTGTGGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

293

Amino Acids

33.11

Weight (kDa)

9.91

Isoelectric Point (pI)

51.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 62
AccB1I GGYRCC 1 cut(s) 98
AccII CGCG 4 cut(s) 480, 683, 740, 775
AclWI GGATC 3 cut(s) 83, 214, 504
AcoI YGGCCR 1 cut(s) 39
AcsI RAATTY 2 cut(s) 809, 866
AcyI GRCGYC 2 cut(s) 59, 99
AfaI GTAC 2 cut(s) 32, 472
AfiI CCNNNNNNNGG 4 cut(s) 111, 137, 159, 763
AgsI TTSAA 4 cut(s) 275, 616, 625, 790
AjnI CCWGG 1 cut(s) 543
AloI GAACNNNNNNTCC 2 cut(s) 155, 187
AluBI AGCT 6 cut(s) 254, 328, 490, 649, 710, 855
AluI AGCT 6 cut(s) 254, 328, 490, 649, 710, 855
Alw26I GTCTC 3 cut(s) 172, 431, 836
AlwI GGATC 3 cut(s) 83, 214, 504
Ama87I CYCGRG 3 cut(s) 308, 485, 650
AoxI GGCC 8 cut(s) 39, 128, 150, 228, 284, 340, 481, 660
ApeKI GCWGC 2 cut(s) 235, 251
ApoI RAATTY 2 cut(s) 809, 866
ArsI GACNNNNNNTTYG 2 cut(s) 281, 313
AspLEI GCGC 3 cut(s) 101, 270, 416
AspS9I GGNCC 4 cut(s) 151, 229, 482, 861
AsuC2I CCSGG 4 cut(s) 132, 154, 232, 595
AsuHPI GGTGA 1 cut(s) 760
AvaI CYCGRG 3 cut(s) 308, 485, 650
AvaII GGWCC 1 cut(s) 861
BalI TGGCCA 1 cut(s) 41
BanI GGYRCC 1 cut(s) 98
BanII GRGCYC 2 cut(s) 351, 642
BauI CACGAG 1 cut(s) 713
BbvI GCAGC 2 cut(s) 247, 263
BccI CCATC 5 cut(s) 20, 220, 382, 529, 739
BcgI CGANNNNNNTGC 2 cut(s) 716, 750
BciT130I CCWGG 1 cut(s) 545
BcnI CCSGG 4 cut(s) 132, 154, 232, 595
BcoDI GTCTC 3 cut(s) 172, 431, 836
BfaI CTAG 3 cut(s) 20, 210, 344
BfoI RGCGCY 3 cut(s) 102, 271, 417
BisI GCNGC 9 cut(s) 5, 102, 236, 252, 373, 478, 481, 579, 738
BlsI GCNGC 9 cut(s) 6, 103, 237, 253, 374, 479, 482, 580, 739
Bme1390I CCNGG 5 cut(s) 132, 154, 232, 545, 595
Bme18I GGWCC 1 cut(s) 861
BmeT110I CYCGRG 3 cut(s) 308, 485, 650
BmgT120I GGNCC 4 cut(s) 151, 229, 482, 861
BmiI GGNNCC 4 cut(s) 100, 484, 639, 827
BmrFI CCNGG 5 cut(s) 132, 154, 232, 545, 595
BmsI GCATC 2 cut(s) 433, 688
BpuEI CTTGAG 1 cut(s) 841
BpuMI CCSGG 4 cut(s) 132, 154, 232, 595
BsaAI YACGTR 1 cut(s) 474
BsaHI GRCGYC 2 cut(s) 59, 99
BsaJI CCNNGG 3 cut(s) 131, 478, 633
BsaWI WCCGGW 1 cut(s) 778
BsaXI ACNNNNNCTCC 2 cut(s) 833, 863
Bsc4I CCNNNNNNNGG 4 cut(s) 111, 137, 159, 763
Bse3DI GCAATG 1 cut(s) 164
BseBI CCWGG 1 cut(s) 545
BseDI CCNNGG 3 cut(s) 131, 478, 633
BseGI GGATG 2 cut(s) 12, 565
BseLI CCNNNNNNNGG 4 cut(s) 111, 137, 159, 763
BseMI GCAATG 1 cut(s) 164
BseXI GCAGC 2 cut(s) 247, 263
Bsh1236I CGCG 4 cut(s) 480, 683, 740, 775
Bsh1285I CGRYCG 3 cut(s) 386, 594, 779
BshFI GGCC 8 cut(s) 41, 130, 152, 230, 286, 342, 483, 662
BshNI GGYRCC 1 cut(s) 98
BsiEI CGRYCG 3 cut(s) 386, 594, 779
BsiHKCI CYCGRG 3 cut(s) 308, 485, 650
BsiSI CCGG 8 cut(s) 16, 96, 131, 154, 232, 594, 674, 779
BsiWI CGTACG 1 cut(s) 470
BslFI GGGAC 1 cut(s) 149
BslI CCNNNNNNNGG 4 cut(s) 111, 137, 159, 763
BsmAI GTCTC 3 cut(s) 172, 431, 836
BsmBI CGTCTC 1 cut(s) 431
BsmFI GGGAC 1 cut(s) 149
BsmI GAATGC 1 cut(s) 459
BsnI GGCC 8 cut(s) 41, 130, 152, 230, 286, 342, 483, 662
BsoBI CYCGRG 3 cut(s) 308, 485, 650
Bsp1286I GDGCHC 2 cut(s) 351, 642
Bsp143I GATC 3 cut(s) 75, 206, 509
Bsp68I TCGCGA 2 cut(s) 683, 775
BspANI GGCC 8 cut(s) 41, 130, 152, 230, 286, 342, 483, 662
BspFNI CGCG 4 cut(s) 480, 683, 740, 775
BspLI GGNNCC 4 cut(s) 100, 484, 639, 827
BspPI GGATC 3 cut(s) 83, 214, 504
BspT107I GGYRCC 1 cut(s) 98
BsrDI GCAATG 1 cut(s) 164
BssECI CCNNGG 3 cut(s) 131, 478, 633
BssMI GATC 3 cut(s) 75, 206, 509
BssNI GRCGYC 2 cut(s) 59, 99
BssSI CACGAG 1 cut(s) 713
BssT1I CCWWGG 1 cut(s) 633
Bst2BI CACGAG 1 cut(s) 713
Bst2UI CCWGG 1 cut(s) 545
Bst4CI ACNGT 5 cut(s) 35, 140, 384, 528, 621
Bst6I CTCTTC 1 cut(s) 549
BstACI GRCGYC 2 cut(s) 59, 99
BstBAI YACGTR 1 cut(s) 474
BstDEI CTNAG 3 cut(s) 125, 431, 669
BstDSI CCRYGG 1 cut(s) 478
BstF5I GGATG 2 cut(s) 12, 565
BstFNI CGCG 4 cut(s) 480, 683, 740, 775
BstH2I RGCGCY 3 cut(s) 102, 271, 417
BstHHI GCGC 3 cut(s) 101, 270, 416
BstKTI GATC 3 cut(s) 78, 209, 512
BstMAI GTCTC 3 cut(s) 172, 431, 836
BstMBI GATC 3 cut(s) 75, 206, 509
BstMCI CGRYCG 3 cut(s) 386, 594, 779
BstMWI GCNNNNNNNGC 3 cut(s) 646, 707, 781
BstNI CCWGG 1 cut(s) 545
BstSCI CCNGG 5 cut(s) 130, 152, 230, 543, 593
BstUI CGCG 4 cut(s) 480, 683, 740, 775
BstV1I GCAGC 2 cut(s) 247, 263
BstX2I RGATCY 2 cut(s) 75, 206
BstYI RGATCY 2 cut(s) 75, 206
BsuRI GGCC 8 cut(s) 41, 130, 152, 230, 286, 342, 483, 662
BtgI CCRYGG 1 cut(s) 478
BtsCI GGATG 2 cut(s) 12, 565
BtuMI TCGCGA 2 cut(s) 683, 775
CfoI GCGC 3 cut(s) 101, 270, 416
Cfr13I GGNCC 4 cut(s) 151, 229, 482, 861
Cfr42I CCGCGG 1 cut(s) 481
CseI GACGC 2 cut(s) 451, 837
Csp6I GTAC 2 cut(s) 31, 471
CviAII CATG 2 cut(s) 368, 376
CviQI GTAC 2 cut(s) 31, 471
DdeI CTNAG 3 cut(s) 125, 431, 669
DinI GGCGCC 1 cut(s) 100
DpnI GATC 3 cut(s) 77, 208, 511
DpnII GATC 3 cut(s) 75, 206, 509
EaeI YGGCCR 1 cut(s) 39
Eam1104I CTCTTC 1 cut(s) 549
EarI CTCTTC 1 cut(s) 549
EciI GGCGGA 1 cut(s) 159
Eco130I CCWWGG 1 cut(s) 633
Eco147I AGGCCT 1 cut(s) 342
Eco24I GRGCYC 2 cut(s) 351, 642
Eco47I GGWCC 1 cut(s) 861
Eco88I CYCGRG 3 cut(s) 308, 485, 650
EcoRII CCWGG 1 cut(s) 543
EcoT14I CCWWGG 1 cut(s) 633
EcoT38I GRGCYC 2 cut(s) 351, 642
EgeI GGCGCC 1 cut(s) 100
EheI GGCGCC 1 cut(s) 100
ErhI CCWWGG 1 cut(s) 633
Esp3I CGTCTC 1 cut(s) 431
FaeI CATG 2 cut(s) 371, 379
FaiI YATR 8 cut(s) 112, 369, 377, 575, 585, 688, 690, 816
FaqI GGGAC 1 cut(s) 149
FatI CATG 2 cut(s) 367, 375
FauI CCCGC 1 cut(s) 65
Fnu4HI GCNGC 9 cut(s) 5, 102, 236, 252, 373, 478, 481, 579, 738
FokI GGATG 1 cut(s) 572
FriOI GRGCYC 2 cut(s) 351, 642
Fsp4HI GCNGC 9 cut(s) 5, 102, 236, 252, 373, 478, 481, 579, 738
FspBI CTAG 3 cut(s) 20, 210, 344
GlaI GCGC 3 cut(s) 100, 269, 415
GluI GCNGC 9 cut(s) 5, 102, 236, 252, 373, 478, 481, 579, 738
HaeII RGCGCY 3 cut(s) 102, 271, 417
HaeIII GGCC 8 cut(s) 41, 130, 152, 230, 286, 342, 483, 662
HapII CCGG 8 cut(s) 16, 96, 131, 154, 232, 594, 674, 779
HgaI GACGC 2 cut(s) 451, 837
HhaI GCGC 3 cut(s) 101, 270, 416
Hin1I GRCGYC 2 cut(s) 59, 99
Hin1II CATG 2 cut(s) 371, 379
Hin6I GCGC 3 cut(s) 99, 268, 414
HinP1I GCGC 3 cut(s) 99, 268, 414
HinfI GANTC 3 cut(s) 245, 653, 718
HpaII CCGG 8 cut(s) 16, 96, 131, 154, 232, 594, 674, 779
HphI GGTGA 1 cut(s) 760
Hpy188I TCNGA 3 cut(s) 50, 281, 533
Hpy188III TCNNGA 4 cut(s) 682, 713, 722, 774
Hpy99I CGWCG 2 cut(s) 445, 728
HpyAV CCTTC 5 cut(s) 115, 276, 307, 673, 784
HpyCH4III ACNGT 5 cut(s) 35, 140, 384, 528, 621
HpyCH4IV ACGT 3 cut(s) 59, 469, 473
HpyF10VI GCNNNNNNNGC 3 cut(s) 646, 707, 781
HpyF3I CTNAG 3 cut(s) 125, 431, 669
HpySE526I ACGT 3 cut(s) 59, 469, 473
Hsp92I GRCGYC 2 cut(s) 59, 99
Hsp92II CATG 2 cut(s) 371, 379
HspAI GCGC 3 cut(s) 99, 268, 414
KasI GGCGCC 1 cut(s) 98
KspI CCGCGG 1 cut(s) 481
Kzo9I GATC 3 cut(s) 75, 206, 509
LmnI GCTCC 2 cut(s) 637, 781
Lsp1109I GCAGC 2 cut(s) 247, 263
LweI GCATC 2 cut(s) 433, 688
MaeI CTAG 3 cut(s) 20, 210, 344
MaeII ACGT 3 cut(s) 59, 469, 473
MalI GATC 3 cut(s) 77, 208, 511
MboI GATC 3 cut(s) 75, 206, 509
MboII GAAGA 7 cut(s) 253, 462, 566, 610, 613, 637, 754
MflI RGATCY 2 cut(s) 75, 206
MhlI GDGCHC 2 cut(s) 351, 642
MlsI TGGCCA 1 cut(s) 41
MluCI AATT 2 cut(s) 809, 866
MluNI TGGCCA 1 cut(s) 41
Mly113I GGCGCC 1 cut(s) 99
MlyI GAGTC 1 cut(s) 662
MnlI CCTC 5 cut(s) 73, 224, 400, 550, 556
Mox20I TGGCCA 1 cut(s) 41
MscI TGGCCA 1 cut(s) 41
MseI TTAA 3 cut(s) 324, 645, 880
Msp20I TGGCCA 1 cut(s) 41
MspA1I CMGCKG 1 cut(s) 480
MspI CCGG 8 cut(s) 16, 96, 131, 154, 232, 594, 674, 779
MspR9I CCNGG 5 cut(s) 132, 154, 232, 545, 595
Mva1269I GAATGC 1 cut(s) 459
MvaI CCWGG 1 cut(s) 545
MvnI CGCG 4 cut(s) 480, 683, 740, 775
MwoI GCNNNNNNNGC 3 cut(s) 646, 707, 781
NarI GGCGCC 1 cut(s) 99
NciI CCSGG 4 cut(s) 132, 154, 232, 595
NdeII GATC 3 cut(s) 75, 206, 509
NlaIII CATG 2 cut(s) 371, 379
NlaIV GGNNCC 4 cut(s) 100, 484, 639, 827
NruI TCGCGA 2 cut(s) 683, 775
PaeR7I CTCGAG 1 cut(s) 650
PceI AGGCCT 1 cut(s) 342
PcsI WCGNNNNNNNCGW 1 cut(s) 720
PctI GAATGC 1 cut(s) 459
PfeI GAWTC 2 cut(s) 245, 718
Pfl23II CGTACG 1 cut(s) 470
PflFI GACNNNGTC 1 cut(s) 847
PkrI GCNGC 9 cut(s) 6, 103, 237, 253, 374, 479, 482, 580, 739
PleI GAGTC 1 cut(s) 661
PluTI GGCGCC 1 cut(s) 102
PpsI GAGTC 1 cut(s) 661
Ppu21I YACGTR 1 cut(s) 474
Psp6I CCWGG 1 cut(s) 543
PspGI CCWGG 1 cut(s) 543
PspLI CGTACG 1 cut(s) 470
PspN4I GGNNCC 4 cut(s) 100, 484, 639, 827
PspPI GGNCC 4 cut(s) 151, 229, 482, 861
PspXI VCTCGAGB 1 cut(s) 650
PsuI RGATCY 2 cut(s) 75, 206
PsyI GACNNNGTC 1 cut(s) 847
RruI TCGCGA 2 cut(s) 683, 775
RsaI GTAC 2 cut(s) 32, 472
RsaNI GTAC 2 cut(s) 31, 471
SacII CCGCGG 1 cut(s) 481
SaqAI TTAA 3 cut(s) 324, 645, 880
SatI GCNGC 9 cut(s) 5, 102, 236, 252, 373, 478, 481, 579, 738
Sau3AI GATC 3 cut(s) 75, 206, 509
Sau96I GGNCC 4 cut(s) 151, 229, 482, 861
SchI GAGTC 1 cut(s) 662
ScrFI CCNGG 5 cut(s) 132, 154, 232, 545, 595
SduI GDGCHC 2 cut(s) 351, 642
SfaNI GCATC 2 cut(s) 433, 688
SfoI GGCGCC 1 cut(s) 100
Sfr274I CTCGAG 1 cut(s) 650
Sfr303I CCGCGG 1 cut(s) 481
SgrBI CCGCGG 1 cut(s) 481
SinI GGWCC 1 cut(s) 861
SlaI CTCGAG 1 cut(s) 650
SmlI CTYRAG 2 cut(s) 650, 856
SmoI CTYRAG 2 cut(s) 650, 856
Sse9I AATT 2 cut(s) 809, 866
SseBI AGGCCT 1 cut(s) 342
SspDI GGCGCC 1 cut(s) 98
SspMI CTAG 3 cut(s) 20, 210, 344
StuI AGGCCT 1 cut(s) 342
StyD4I CCNGG 5 cut(s) 130, 152, 230, 543, 593
StyI CCWWGG 1 cut(s) 633
TaaI ACNGT 5 cut(s) 35, 140, 384, 528, 621
TaiI ACGT 3 cut(s) 62, 472, 476
TaqI TCGA 5 cut(s) 65, 224, 386, 651, 723
TaqII GACCGA 2 cut(s) 322, 771
TasI AATT 2 cut(s) 809, 866
TauI GCSGC 7 cut(s) 7, 104, 375, 480, 483, 581, 740
TfiI GAWTC 2 cut(s) 245, 718
Tru1I TTAA 3 cut(s) 324, 645, 880
Tru9I TTAA 3 cut(s) 324, 645, 880
TseI GCWGC 2 cut(s) 235, 251
TspDTI ATGAA 2 cut(s) 567, 600
TspGWI ACGGA 3 cut(s) 163, 257, 419
Tth111I GACNNNGTC 1 cut(s) 847
VpaK11BI GGWCC 1 cut(s) 861
XapI RAATTY 2 cut(s) 809, 866
XcmI CCANNNNNNNNNTGG 1 cut(s) 871
XhoI CTCGAG 1 cut(s) 650
XspI CTAG 3 cut(s) 20, 210, 344
ZraI GACGTC 1 cut(s) 60
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.