Rmu_sc0036298.1_g000001

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0036298.1
OG0000057
Physical Location & Seq
Forward (+)
1 .. 1302
1302 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0036298.1_g000001.1.cds

Sequence Viewer

Length: 993 bp
gaaaaggtagccgctgattttgacagggaaatcgcgaggacagatcatctcatacgtgaactagacgagcgcattgcccagcttgctgaggatactaagcgacaaattgcacagtctgagaatgcggtaagagttcatgccagaggtatcgctgatgagcagagcgagcgacaaaagcaggtcatggaggccatctcgagccaagccaagcatactgcgtcagagttggcaactattcgcaacgaagggtctaacctcgctacccagattgccatgcaaagagcggaattggacgaggctaaagtggtcctgaataaggctctaggagatcctaatgccatcctcggttcgcttggccaaccctcaggctctggcaaatacatacctccgaatgctagggaaaaggctagcagcaacactgctacgccgtctgcagcggccgttgcctcgtcaactaaaaacagggacaaagctctagtaatctgcgacaaagagaagtctacacctctggcagcacagaagtgtaaaattttgaacgtcggtgaaggcactcctatagatcctgcggcgatgactcttcaacaatccactattccccagaccattcctctgaaggaaggaacagcgaccgctagccaggccgcatgtctccagactacttgccagaacgtggcgatacctccgcctcctggcccagattatccaggtttagggtgcaatgcggtcagtatcaaaatgatgacatcctcaagtgcagaatcattggtacttctctttctggagctgcttttagatggttttctaagcttcgaccaggatcagtggcagattgacgagcaatggaaaagcttttctaagaaatttttagggctatcgagcctgaggttgacttggcttctctcactcaggtggcccaacagctcaccaagtctgctgttgcttatcttcaatgcttccagattcaaaaggccaactgagtatggtattgcctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

330

Amino Acids

35.74

Weight (kDa)

6.43

Isoelectric Point (pI)

41.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 169
AccB7I CCANNNNNTGG 1 cut(s) 670
AccBSI CCGCTC 1 cut(s) 284
AccI GTMKAC 1 cut(s) 500
AccII CGCG 1 cut(s) 35
AciI CCGC 9 cut(s) 12, 125, 284, 437, 566, 630, 642, 683, 722
AclWI GGATC 3 cut(s) 323, 554, 825
AcoI YGGCCR 2 cut(s) 355, 438
AcsI RAATTY 2 cut(s) 528, 860
AcuI CTGAAG 1 cut(s) 632
AfaI GTAC 1 cut(s) 768
AfiI CCNNNNNNNGG 4 cut(s) 316, 670, 689, 710
AgsI TTSAA 4 cut(s) 535, 581, 949, 964
AjnI CCWGG 4 cut(s) 636, 688, 703, 813
AleI CACNNNNGTG 2 cut(s) 520, 907
AluBI AGCT 6 cut(s) 82, 473, 784, 807, 849, 921
AluI AGCT 6 cut(s) 82, 473, 784, 807, 849, 921
Alw26I GTCTC 1 cut(s) 653
AlwI GGATC 3 cut(s) 323, 554, 825
AlwNI CAGNNNCTG 1 cut(s) 371
Ama87I CYCGRG 1 cut(s) 196
AoxI GGCC 7 cut(s) 189, 355, 438, 639, 691, 911, 968
ApeKI GCWGC 4 cut(s) 411, 434, 512, 784
ApoI RAATTY 2 cut(s) 528, 860
AspLEI GCGC 1 cut(s) 72
AspS9I GGNCC 3 cut(s) 307, 692, 912
AsuHPI GGTGA 2 cut(s) 554, 915
AsuNHI GCTAGC 2 cut(s) 407, 632
AvaI CYCGRG 1 cut(s) 196
AvaII GGWCC 1 cut(s) 307
AxyI CCTNAGG 2 cut(s) 364, 881
BalI TGGCCA 1 cut(s) 357
BbvCI CCTCAGC 1 cut(s) 87
BbvI GCAGC 4 cut(s) 423, 446, 524, 771
BccI CCATC 3 cut(s) 200, 347, 788
BceAI ACGGC 2 cut(s) 412, 425
BcgI CGANNNNNNTGC 2 cut(s) 56, 90
BciT130I CCWGG 4 cut(s) 638, 690, 705, 815
BciVI GTATCC 1 cut(s) 85
BcoDI GTCTC 1 cut(s) 653
BfaI CTAG 6 cut(s) 62, 323, 396, 408, 476, 633
BfmI CTRYAG 2 cut(s) 432, 555
BfuAI ACCTGC 1 cut(s) 169
BfuI GTATCC 1 cut(s) 85
BisI GCNGC 8 cut(s) 12, 412, 435, 438, 513, 567, 642, 785
BlsI GCNGC 8 cut(s) 13, 413, 436, 439, 514, 568, 643, 786
Bme1390I CCNGG 4 cut(s) 638, 690, 705, 815
Bme18I GGWCC 1 cut(s) 307
BmeT110I CYCGRG 1 cut(s) 196
BmgT120I GGNCC 3 cut(s) 307, 692, 912
BmrFI CCNGG 4 cut(s) 638, 690, 705, 815
BmtI GCTAGC 2 cut(s) 411, 636
BplI GAGNNNNNCTC 2 cut(s) 179, 211
BpmI CTGGAG 2 cut(s) 635, 800
Bpu10I CCTNAGC 1 cut(s) 87
BpuEI CTTGAG 1 cut(s) 733
BsaAI YACGTR 1 cut(s) 56
BsaJI CCNNGG 1 cut(s) 343
Bsc4I CCNNNNNNNGG 4 cut(s) 316, 670, 689, 710
Bse21I CCTNAGG 2 cut(s) 364, 881
Bse3DI GCAATG 3 cut(s) 72, 724, 845
BseBI CCWGG 4 cut(s) 638, 690, 705, 815
BseDI CCNNGG 1 cut(s) 343
BseGI GGATG 2 cut(s) 339, 743
BseLI CCNNNNNNNGG 4 cut(s) 316, 670, 689, 710
BseMI GCAATG 3 cut(s) 72, 724, 845
BseMII CTCAG 6 cut(s) 78, 108, 378, 872, 919, 966
BseX3I CGGCCG 1 cut(s) 438
BseXI GCAGC 4 cut(s) 423, 446, 524, 771
BseYI CCCAGC 1 cut(s) 78
BsgI GTGCAG 1 cut(s) 774
Bsh1236I CGCG 1 cut(s) 35
Bsh1285I CGRYCG 2 cut(s) 441, 630
BshFI GGCC 7 cut(s) 191, 357, 440, 641, 693, 913, 970
BsiEI CGRYCG 2 cut(s) 441, 630
BsiHKCI CYCGRG 1 cut(s) 196
BslFI GGGAC 1 cut(s) 479
BslI CCNNNNNNNGG 4 cut(s) 316, 670, 689, 710
BsmAI GTCTC 1 cut(s) 653
BsmFI GGGAC 1 cut(s) 479
BsmI GAATGC 2 cut(s) 127, 397
BsnI GGCC 7 cut(s) 191, 357, 440, 641, 693, 913, 970
BsoBI CYCGRG 1 cut(s) 196
Bsp143I GATC 4 cut(s) 43, 328, 559, 817
Bsp68I TCGCGA 1 cut(s) 35
BspACI CCGC 9 cut(s) 12, 125, 284, 437, 566, 630, 642, 683, 722
BspANI GGCC 7 cut(s) 191, 357, 440, 641, 693, 913, 970
BspCNI CTCAG 6 cut(s) 79, 109, 377, 873, 918, 967
BspFNI CGCG 1 cut(s) 35
BspMAI CTGCAG 1 cut(s) 436
BspMI ACCTGC 1 cut(s) 169
BspOI GCTAGC 2 cut(s) 411, 636
BspPI GGATC 3 cut(s) 323, 554, 825
BsrBI CCGCTC 1 cut(s) 284
BsrDI GCAATG 3 cut(s) 72, 724, 845
BssECI CCNNGG 1 cut(s) 343
BssMI GATC 4 cut(s) 43, 328, 559, 817
Bst2UI CCWGG 4 cut(s) 638, 690, 705, 815
Bst4CI ACNGT 1 cut(s) 114
Bst6I CTCTTC 1 cut(s) 582
BstBAI YACGTR 1 cut(s) 56
BstC8I GCNNGC 4 cut(s) 84, 167, 409, 634
BstDEI CTNAG 9 cut(s) 87, 96, 117, 364, 803, 855, 881, 905, 975
BstENI CCTNNNNNAGG 1 cut(s) 314
BstF5I GGATG 2 cut(s) 339, 743
BstFNI CGCG 1 cut(s) 35
BstHHI GCGC 1 cut(s) 72
BstKTI GATC 4 cut(s) 46, 331, 562, 820
BstMAI GTCTC 1 cut(s) 653
BstMBI GATC 4 cut(s) 43, 328, 559, 817
BstMCI CGRYCG 2 cut(s) 441, 630
BstMWI GCNNNNNNNGC 5 cut(s) 83, 166, 175, 443, 638
BstNI CCWGG 4 cut(s) 638, 690, 705, 815
BstNSI RCATGY 1 cut(s) 648
BstSCI CCNGG 4 cut(s) 636, 688, 703, 813
BstSFI CTRYAG 2 cut(s) 432, 555
BstUI CGCG 1 cut(s) 35
BstV1I GCAGC 4 cut(s) 423, 446, 524, 771
BstX2I RGATCY 2 cut(s) 328, 559
BstYI RGATCY 2 cut(s) 328, 559
BstZI CGGCCG 1 cut(s) 438
Bsu36I CCTNAGG 2 cut(s) 364, 881
BsuI GTATCC 1 cut(s) 85
BsuRI GGCC 7 cut(s) 191, 357, 440, 641, 693, 913, 970
BtgZI GCGATG 1 cut(s) 584
BtsCI GGATG 2 cut(s) 339, 743
BtsI GCAGTG 1 cut(s) 417
BtsIMutI CAGTG 2 cut(s) 417, 827
BtuMI TCGCGA 1 cut(s) 35
BveI ACCTGC 1 cut(s) 169
Cac8I GCNNGC 4 cut(s) 84, 167, 409, 634
CaiI CAGNNNCTG 1 cut(s) 371
CfoI GCGC 1 cut(s) 72
Cfr13I GGNCC 3 cut(s) 307, 692, 912
CseI GACGC 1 cut(s) 207
Csp6I GTAC 1 cut(s) 767
CviAII CATG 4 cut(s) 137, 184, 274, 645
CviQI GTAC 1 cut(s) 767
DdeI CTNAG 9 cut(s) 87, 96, 117, 364, 803, 855, 881, 905, 975
DpnI GATC 4 cut(s) 45, 330, 561, 819
DpnII GATC 4 cut(s) 43, 328, 559, 817
EaeI YGGCCR 2 cut(s) 355, 438
EagI CGGCCG 1 cut(s) 438
Eam1104I CTCTTC 1 cut(s) 582
EarI CTCTTC 1 cut(s) 582
EciI GGCGGA 1 cut(s) 672
EclXI CGGCCG 1 cut(s) 438
Eco47I GGWCC 1 cut(s) 307
Eco52I CGGCCG 1 cut(s) 438
Eco57I CTGAAG 1 cut(s) 632
Eco81I CCTNAGG 2 cut(s) 364, 881
Eco88I CYCGRG 1 cut(s) 196
EcoNI CCTNNNNNAGG 1 cut(s) 314
EcoRII CCWGG 4 cut(s) 636, 688, 703, 813
FaeI CATG 4 cut(s) 140, 187, 277, 648
FaiI YATR 9 cut(s) 53, 138, 185, 213, 275, 383, 557, 646, 981
FaqI GGGAC 1 cut(s) 479
FatI CATG 4 cut(s) 136, 183, 273, 644
FblI GTMKAC 1 cut(s) 500
Fnu4HI GCNGC 8 cut(s) 12, 412, 435, 438, 513, 567, 642, 785
FokI GGATG 2 cut(s) 326, 730
Fsp4HI GCNGC 8 cut(s) 12, 412, 435, 438, 513, 567, 642, 785
FspBI CTAG 6 cut(s) 62, 323, 396, 408, 476, 633
GlaI GCGC 1 cut(s) 71
GluI GCNGC 8 cut(s) 12, 412, 435, 438, 513, 567, 642, 785
GsaI CCCAGC 1 cut(s) 82
GsuI CTGGAG 2 cut(s) 635, 800
HaeIII GGCC 7 cut(s) 191, 357, 440, 641, 693, 913, 970
HgaI GACGC 1 cut(s) 207
HhaI GCGC 1 cut(s) 72
Hin1II CATG 4 cut(s) 140, 187, 277, 648
Hin6I GCGC 1 cut(s) 70
HinP1I GCGC 1 cut(s) 70
HincII GTYRAC 2 cut(s) 453, 888
HindII GTYRAC 2 cut(s) 453, 888
HindIII AAGCTT 2 cut(s) 805, 847
HinfI GANTC 3 cut(s) 574, 758, 960
HphI GGTGA 2 cut(s) 554, 915
Hpy166II GTNNAC 4 cut(s) 59, 453, 501, 888
Hpy188I TCNGA 4 cut(s) 118, 223, 390, 612
Hpy188III TCNNGA 6 cut(s) 34, 196, 310, 652, 779, 957
Hpy8I GTNNAC 4 cut(s) 59, 453, 501, 888
Hpy99I CGWCG 1 cut(s) 542
HpyAV CCTTC 4 cut(s) 239, 539, 607, 611
HpyCH4III ACNGT 1 cut(s) 114
HpyCH4IV ACGT 3 cut(s) 55, 537, 669
HpyCH4V TGCA 5 cut(s) 110, 277, 434, 717, 755
HpyF10VI GCNNNNNNNGC 5 cut(s) 83, 166, 175, 443, 638
HpyF3I CTNAG 9 cut(s) 87, 96, 117, 364, 803, 855, 881, 905, 975
HpySE526I ACGT 3 cut(s) 55, 537, 669
Hsp92II CATG 4 cut(s) 140, 187, 277, 648
HspAI GCGC 1 cut(s) 70
Kzo9I GATC 4 cut(s) 43, 328, 559, 817
LmnI GCTCC 1 cut(s) 781
Lsp1109I GCAGC 4 cut(s) 423, 446, 524, 771
MaeI CTAG 6 cut(s) 62, 323, 396, 408, 476, 633
MaeII ACGT 3 cut(s) 55, 537, 669
MalI GATC 4 cut(s) 45, 330, 561, 819
MbiI CCGCTC 1 cut(s) 284
MboI GATC 4 cut(s) 43, 328, 559, 817
MboII GAAGA 2 cut(s) 569, 937
MflI RGATCY 2 cut(s) 328, 559
MlsI TGGCCA 1 cut(s) 357
MluCI AATT 4 cut(s) 105, 287, 528, 860
MluNI TGGCCA 1 cut(s) 357
MlyI GAGTC 1 cut(s) 568
Mox20I TGGCCA 1 cut(s) 357
MscI TGGCCA 1 cut(s) 357
MslI CAYNNNNRTG 2 cut(s) 520, 907
Msp20I TGGCCA 1 cut(s) 357
MspA1I CMGCKG 2 cut(s) 14, 437
MspR9I CCNGG 4 cut(s) 638, 690, 705, 815
Mva1269I GAATGC 2 cut(s) 127, 397
MvaI CCWGG 4 cut(s) 638, 690, 705, 815
MvnI CGCG 1 cut(s) 35
MwoI GCNNNNNNNGC 5 cut(s) 83, 166, 175, 443, 638
NdeII GATC 4 cut(s) 43, 328, 559, 817
NheI GCTAGC 2 cut(s) 407, 632
NlaIII CATG 4 cut(s) 140, 187, 277, 648
NruI TCGCGA 1 cut(s) 35
NspI RCATGY 1 cut(s) 648
OliI CACNNNNGTG 2 cut(s) 520, 907
PaeR7I CTCGAG 1 cut(s) 196
PctI GAATGC 2 cut(s) 127, 397
PfeI GAWTC 2 cut(s) 758, 960
PflMI CCANNNNNTGG 1 cut(s) 670
PkrI GCNGC 8 cut(s) 13, 413, 436, 439, 514, 568, 643, 786
PleI GAGTC 1 cut(s) 568
PpsI GAGTC 1 cut(s) 568
Ppu21I YACGTR 1 cut(s) 56
Psp6I CCWGG 4 cut(s) 636, 688, 703, 813
PspFI CCCAGC 1 cut(s) 78
PspGI CCWGG 4 cut(s) 636, 688, 703, 813
PspPI GGNCC 3 cut(s) 307, 692, 912
PstI CTGCAG 1 cut(s) 436
PstNI CAGNNNCTG 1 cut(s) 371
PsuI RGATCY 2 cut(s) 328, 559
RruI TCGCGA 1 cut(s) 35
RsaI GTAC 1 cut(s) 768
RsaNI GTAC 1 cut(s) 767
RseI CAYNNNNRTG 2 cut(s) 520, 907
SatI GCNGC 8 cut(s) 12, 412, 435, 438, 513, 567, 642, 785
Sau3AI GATC 4 cut(s) 43, 328, 559, 817
Sau96I GGNCC 3 cut(s) 307, 692, 912
SchI GAGTC 1 cut(s) 568
ScrFI CCNGG 4 cut(s) 638, 690, 705, 815
SfcI CTRYAG 2 cut(s) 432, 555
Sfr274I CTCGAG 1 cut(s) 196
SinI GGWCC 1 cut(s) 307
SlaI CTCGAG 1 cut(s) 196
SmiMI CAYNNNNRTG 2 cut(s) 520, 907
SmlI CTYRAG 2 cut(s) 196, 748
SmoI CTYRAG 2 cut(s) 196, 748
Sse9I AATT 4 cut(s) 105, 287, 528, 860
SsiI CCGC 9 cut(s) 12, 125, 284, 437, 566, 630, 642, 683, 722
SspMI CTAG 6 cut(s) 62, 323, 396, 408, 476, 633
StyD4I CCNGG 4 cut(s) 636, 688, 703, 813
TaaI ACNGT 1 cut(s) 114
TaiI ACGT 3 cut(s) 58, 540, 672
TaqI TCGA 3 cut(s) 197, 810, 875
TasI AATT 4 cut(s) 105, 287, 528, 860
TauI GCSGC 4 cut(s) 14, 440, 569, 644
TfiI GAWTC 2 cut(s) 758, 960
TscAI CASTG 2 cut(s) 424, 827
TseI GCWGC 4 cut(s) 411, 434, 512, 784
TspDTI ATGAA 1 cut(s) 125
TspRI CASTG 2 cut(s) 424, 827
Van91I CCANNNNNTGG 1 cut(s) 670
VpaK11BI GGWCC 1 cut(s) 307
XagI CCTNNNNNAGG 1 cut(s) 314
XapI RAATTY 2 cut(s) 528, 860
XceI RCATGY 1 cut(s) 648
XhoI CTCGAG 1 cut(s) 196
XmiI GTMKAC 1 cut(s) 500
XspI CTAG 6 cut(s) 62, 323, 396, 408, 476, 633
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.