Rmu_sc0004538.1_g000006

Sister chromatid cohesion protein PDS5 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004538.1
OG0000057
Physical Location & Seq
Reverse (-)
13055 .. 14521
1467 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004538.1_g000006.1.cds

Sequence Viewer

Length: 1467 bp
atgggagaactcatcacagaggtaggcagcttcgagcatctcctcagagaaacagatgcgaggaagaatgcatccaaagggacgtacgtaccgggaaaacatcgtaccgtagcggccctgagctaccagccgactacctatgacccttactaccatcataacactgaagaagtggtccaggatgatgaagaggacgaggagaatgatatagcggcctacgagttaaccgggaaaaagaatccatccttgaagcagctgaaaatttccaaggaacccgttaagctcaaatcggtggccttcaccaaacctgagttcgcaacatatacatatgatgccaacaaggcccatgagatcctcgacgaaatgatcgctgcgaagatggtgaagactgattttggaccttttcctcgcccagaacagctaaaggggaagaagtattgcaagttccctaatttgtggaatcacaatacagcggactgtgtaaagctcaaagaccagattcaggtatggcttaataatggcagttttcaggtggaagctccagtcacggcggcggcactagtcgacttggatccctttccagacactgggatcaacatggtcgatgtaaactggaccaaacagcagcaacggaaacccactctggatttgggctcgaatgagcgaggtgagaagtccgctgcggacaagacacctgcgaagggcaaagctgaatcaaacagtcaagcctcgcccgtgatcctatgctcgcgatgtaaagaagagtgtggtattcaagtgtcacatgaagaggttgagcagacatttcactttggttccctaccaccgatcaagttggcttcgtcatcgcggaactatcagccttccagcccaagagaaagagagaaattggagtcaccatcatccccaaaggattccaatttgttcaggaagctgagagcagccgcgagcgatcagaaacaggaggagaaggccaggagcgaatgcaagaatattctgaccaagccctacatcccacctgcttcagctaataccatcaaggaaggcaaatggtacaccagggaaaaggggaaggcagtggaaataagcccttccagaaagcggaagctgcagcacaggtttggggaagccaagcgtgctctagaggctctggaccagggcctgatcaagccttcccaactggtcaagtcgcccgagcagtatcagagagagatggaggcgttagctgctaagccgttgagacctccctacagttttaacaaacaagcagattcactgacaggggcatcaaagcccagtgtgttttacaagattactgaggagcgatcacctcctcttgcacgaaagaagagctcgccaactcggcggccacatgtcaagcgcaggttattccgtgaggagccagaggtcaaagcttcagtctttgacagactggggggcaaggacagggctactgataccctatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

488

Amino Acids

55.06

Weight (kDa)

9.2

Isoelectric Point (pI)

53.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 703, 1027
Acc36I ACCTGC 3 cut(s) 703, 1027, 1374
AccB7I CCANNNNNTGG 1 cut(s) 587
AccI GTMKAC 1 cut(s) 564
AccII CGCG 3 cut(s) 751, 850, 947
AclWI GGATC 5 cut(s) 346, 566, 579, 599, 733
AcoI YGGCCR 1 cut(s) 1367
AcsI RAATTY 1 cut(s) 261
AcuI CTGAAG 3 cut(s) 186, 1008, 1401
AfaI GTAC 4 cut(s) 86, 90, 106, 1055
AfiI CCNNNNNNNGG 4 cut(s) 502, 587, 701, 1101
AflIII ACRYGT 1 cut(s) 1372
AgsI TTSAA 2 cut(s) 250, 776
AhlI ACTAGT 1 cut(s) 559
AjnI CCWGG 4 cut(s) 177, 974, 1058, 1155
AjuI GAANNNNNNNTTGG 2 cut(s) 296, 328
Alw21I GWGCWC 2 cut(s) 1141, 1355
Alw26I GTCTC 1 cut(s) 1234
AlwI GGATC 5 cut(s) 346, 566, 579, 599, 733
AlwNI CAGNNNCTG 2 cut(s) 587, 1162
Ama87I CYCGRG 1 cut(s) 1193
AoxI GGCC 7 cut(s) 114, 213, 294, 342, 972, 1159, 1367
ApeKI GCWGC 9 cut(s) 27, 253, 371, 625, 680, 941, 1108, 1111, 1226
ApoI RAATTY 1 cut(s) 261
ArsI GACNNNNNNTTYG 2 cut(s) 1404, 1436
AspLEI GCGC 1 cut(s) 1383
AspS9I GGNCC 7 cut(s) 115, 175, 343, 398, 615, 1153, 1159
AsuC2I CCSGG 2 cut(s) 93, 229
AsuHPI GGTGA 5 cut(s) 292, 394, 680, 888, 1320
AvaI CYCGRG 1 cut(s) 1193
AvaII GGWCC 4 cut(s) 175, 398, 615, 1153
BaeI ACNNNNGTAYC 2 cut(s) 72, 105
BamHI GGATCC 1 cut(s) 571
BanII GRGCYC 2 cut(s) 656, 1355
BbsI GAAGAC 1 cut(s) 392
Bbv12I GWGCWC 2 cut(s) 1141, 1355
BbvI GCAGC 9 cut(s) 39, 265, 358, 637, 667, 953, 1095, 1123, 1213
BccI CCATC 6 cut(s) 162, 250, 373, 907, 1043, 1207
BceAI ACGGC 2 cut(s) 564, 1219
BciT130I CCWGG 4 cut(s) 179, 976, 1060, 1157
BclI TGATCA 1 cut(s) 1164
BcnI CCSGG 2 cut(s) 93, 229
BcoDI GTCTC 1 cut(s) 1234
BcuI ACTAGT 1 cut(s) 559
BfaI CTAG 2 cut(s) 560, 1142
BfmI CTRYAG 3 cut(s) 1109, 1249, 1463
BfuAI ACCTGC 3 cut(s) 703, 1027, 1374
BglI GCCNNNNNGGC 2 cut(s) 341, 1363
BlpI GCTNAGC 1 cut(s) 1230
Bme1390I CCNGG 6 cut(s) 93, 179, 229, 976, 1060, 1157
Bme18I GGWCC 4 cut(s) 175, 398, 615, 1153
BmeT110I CYCGRG 1 cut(s) 1193
BmgT120I GGNCC 7 cut(s) 115, 175, 343, 398, 615, 1153, 1159
BmiI GGNNCC 4 cut(s) 273, 573, 817, 1401
BmrFI CCNGG 6 cut(s) 93, 179, 229, 976, 1060, 1157
BmrI ACTGGG 3 cut(s) 597, 1290, 1442
BmsI GCATC 5 cut(s) 46, 46, 80, 322, 1295
BmuI ACTGGG 3 cut(s) 597, 1290, 1442
BpiI GAAGAC 1 cut(s) 392
BpmI CTGGAG 1 cut(s) 525
Bpu10I CCTNAGC 1 cut(s) 119
Bpu1102I GCTNAGC 1 cut(s) 1230
BpuMI CCSGG 2 cut(s) 93, 229
BsaAI YACGTR 1 cut(s) 88
BsaI GGTCTC 1 cut(s) 1234
BsaJI CCNNGG 3 cut(s) 267, 1059, 1156
Bsc4I CCNNNNNNNGG 4 cut(s) 502, 587, 701, 1101
Bse1I ACTGG 6 cut(s) 542, 592, 617, 1185, 1296, 1437
BseBI CCWGG 4 cut(s) 179, 976, 1060, 1157
BseDI CCNNGG 3 cut(s) 267, 1059, 1156
BseGI GGATG 5 cut(s) 71, 187, 242, 902, 1011
BseLI CCNNNNNNNGG 4 cut(s) 502, 587, 701, 1101
BseMII CTCAG 5 cut(s) 58, 110, 300, 926, 1308
BseNI ACTGG 6 cut(s) 542, 592, 617, 1185, 1296, 1437
BseRI GAGGAG 6 cut(s) 32, 212, 980, 1323, 1334, 1412
BseXI GCAGC 9 cut(s) 39, 265, 358, 637, 667, 953, 1095, 1123, 1213
Bsh1236I CGCG 3 cut(s) 751, 850, 947
BshFI GGCC 7 cut(s) 116, 215, 296, 344, 974, 1161, 1369
BsiHKAI GWGCWC 2 cut(s) 1141, 1355
BsiHKCI CYCGRG 1 cut(s) 1193
BsiSI CCGG 2 cut(s) 92, 228
BsiWI CGTACG 1 cut(s) 84
BslFI GGGAC 1 cut(s) 94
BslI CCNNNNNNNGG 4 cut(s) 502, 587, 701, 1101
BsmAI GTCTC 1 cut(s) 1234
BsmFI GGGAC 1 cut(s) 94
BsmI GAATGC 2 cut(s) 73, 989
BsnI GGCC 7 cut(s) 116, 215, 296, 344, 974, 1161, 1369
Bso31I GGTCTC 1 cut(s) 1234
BsoBI CYCGRG 1 cut(s) 1193
Bsp1286I GDGCHC 3 cut(s) 656, 1141, 1355
Bsp143I GATC 9 cut(s) 351, 366, 571, 591, 738, 828, 952, 1164, 1325
Bsp1720I GCTNAGC 1 cut(s) 1230
Bsp68I TCGCGA 1 cut(s) 751
BspANI GGCC 7 cut(s) 116, 215, 296, 344, 974, 1161, 1369
BspCNI CTCAG 5 cut(s) 57, 111, 301, 927, 1309
BspFNI CGCG 3 cut(s) 751, 850, 947
BspLI GGNNCC 4 cut(s) 273, 573, 817, 1401
BspMAI CTGCAG 1 cut(s) 1113
BspMI ACCTGC 3 cut(s) 703, 1027, 1374
BspPI GGATC 5 cut(s) 346, 566, 579, 599, 733
BspQI GCTCTTC 1 cut(s) 1343
BspTNI GGTCTC 1 cut(s) 1234
BsrI ACTGG 6 cut(s) 542, 592, 617, 1185, 1296, 1437
BssECI CCNNGG 3 cut(s) 267, 1059, 1156
BssMI GATC 9 cut(s) 351, 366, 571, 591, 738, 828, 952, 1164, 1325
BssT1I CCWWGG 1 cut(s) 267
Bst2UI CCWGG 4 cut(s) 179, 976, 1060, 1157
Bst4CI ACNGT 4 cut(s) 109, 479, 722, 1253
Bst6I CTCTTC 4 cut(s) 183, 756, 783, 1343
BstBAI YACGTR 1 cut(s) 88
BstC8I GCNNGC 4 cut(s) 749, 949, 1137, 1355
BstDEI CTNAG 6 cut(s) 44, 119, 309, 935, 1230, 1317
BstF5I GGATG 5 cut(s) 71, 187, 242, 902, 1011
BstFNI CGCG 3 cut(s) 751, 850, 947
BstHHI GCGC 1 cut(s) 1383
BstKTI GATC 9 cut(s) 354, 369, 574, 594, 741, 831, 955, 1167, 1328
BstMAI GTCTC 1 cut(s) 1234
BstMBI GATC 9 cut(s) 351, 366, 571, 591, 738, 828, 952, 1164, 1325
BstMWI GCNNNNNNNGC 6 cut(s) 341, 1108, 1136, 1145, 1226, 1363
BstNI CCWGG 4 cut(s) 179, 976, 1060, 1157
BstNSI RCATGY 1 cut(s) 1376
BstSCI CCNGG 6 cut(s) 91, 177, 227, 974, 1058, 1155
BstSFI CTRYAG 3 cut(s) 1109, 1249, 1463
BstSNI TACGTA 1 cut(s) 88
BstUI CGCG 3 cut(s) 751, 850, 947
BstV1I GCAGC 9 cut(s) 39, 265, 358, 637, 667, 953, 1095, 1123, 1213
BstV2I GAAGAC 1 cut(s) 392
BstX2I RGATCY 2 cut(s) 351, 571
BstYI RGATCY 2 cut(s) 351, 571
BsuRI GGCC 7 cut(s) 116, 215, 296, 344, 974, 1161, 1369
BtgZI GCGATG 2 cut(s) 766, 831
BtsCI GGATG 5 cut(s) 71, 187, 242, 902, 1011
BtsI GCAGTG 1 cut(s) 1083
BtsIMutI CAGTG 5 cut(s) 162, 585, 1083, 1274, 1303
BtuMI TCGCGA 1 cut(s) 751
BveI ACCTGC 3 cut(s) 703, 1027, 1374
Cac8I GCNNGC 4 cut(s) 749, 949, 1137, 1355
CaiI CAGNNNCTG 2 cut(s) 587, 1162
CfoI GCGC 1 cut(s) 1383
Cfr13I GGNCC 7 cut(s) 115, 175, 343, 398, 615, 1153, 1159
Csp6I GTAC 4 cut(s) 85, 89, 105, 1054
CviAII CATG 4 cut(s) 347, 598, 785, 1373
CviQI GTAC 4 cut(s) 85, 89, 105, 1054
DdeI CTNAG 6 cut(s) 44, 119, 309, 935, 1230, 1317
DpnI GATC 9 cut(s) 353, 368, 573, 593, 740, 830, 954, 1166, 1327
DpnII GATC 9 cut(s) 351, 366, 571, 591, 738, 828, 952, 1164, 1325
EaeI YGGCCR 1 cut(s) 1367
Eam1104I CTCTTC 4 cut(s) 183, 756, 783, 1343
EarI CTCTTC 4 cut(s) 183, 756, 783, 1343
Ecl136II GAGCTC 1 cut(s) 1353
Eco105I TACGTA 1 cut(s) 88
Eco130I CCWWGG 1 cut(s) 267
Eco24I GRGCYC 2 cut(s) 656, 1355
Eco31I GGTCTC 1 cut(s) 1234
Eco47I GGWCC 4 cut(s) 175, 398, 615, 1153
Eco53kI GAGCTC 1 cut(s) 1353
Eco57I CTGAAG 3 cut(s) 186, 1008, 1401
Eco88I CYCGRG 1 cut(s) 1193
EcoICRI GAGCTC 1 cut(s) 1353
EcoO109I RGGNCCY 1 cut(s) 1159
EcoRII CCWGG 4 cut(s) 177, 974, 1058, 1155
EcoT14I CCWWGG 1 cut(s) 267
EcoT22I ATGCAT 1 cut(s) 73
EcoT38I GRGCYC 2 cut(s) 656, 1355
ErhI CCWWGG 1 cut(s) 267
FaeI CATG 4 cut(s) 350, 601, 788, 1376
FaqI GGGAC 1 cut(s) 94
FatI CATG 4 cut(s) 346, 597, 784, 1372
FauNDI CATATG 1 cut(s) 328
FbaI TGATCA 1 cut(s) 1164
FblI GTMKAC 1 cut(s) 564
FokI GGATG 5 cut(s) 58, 194, 229, 889, 998
FriOI GRGCYC 2 cut(s) 656, 1355
FspBI CTAG 2 cut(s) 560, 1142
GlaI GCGC 1 cut(s) 1382
GsuI CTGGAG 1 cut(s) 525
HaeIII GGCC 7 cut(s) 116, 215, 296, 344, 974, 1161, 1369
HapII CCGG 2 cut(s) 92, 228
HhaI GCGC 1 cut(s) 1383
Hin1II CATG 4 cut(s) 350, 601, 788, 1376
Hin6I GCGC 1 cut(s) 1381
HinP1I GCGC 1 cut(s) 1381
HincII GTYRAC 2 cut(s) 225, 565
HindII GTYRAC 2 cut(s) 225, 565
HindIII AAGCTT 1 cut(s) 1413
HinfI GANTC 7 cut(s) 238, 460, 499, 713, 893, 914, 1271
HpaI GTTAAC 1 cut(s) 225
HpaII CCGG 2 cut(s) 92, 228
HphI GGTGA 5 cut(s) 292, 394, 680, 888, 1320
Hpy166II GTNNAC 4 cut(s) 225, 565, 610, 1056
Hpy188I TCNGA 4 cut(s) 47, 957, 999, 1206
Hpy188III TCNNGA 7 cut(s) 581, 644, 750, 928, 1095, 1142, 1151
Hpy8I GTNNAC 4 cut(s) 225, 565, 610, 1056
Hpy99I CGWCG 1 cut(s) 362
HpyAV CCTTC 8 cut(s) 307, 694, 873, 964, 1037, 1066, 1101, 1182
HpyCH4III ACNGT 4 cut(s) 109, 479, 722, 1253
HpyCH4IV ACGT 2 cut(s) 83, 87
HpyCH4V TGCA 5 cut(s) 71, 441, 987, 1111, 1340
HpyF10VI GCNNNNNNNGC 6 cut(s) 341, 1108, 1136, 1145, 1226, 1363
HpyF3I CTNAG 6 cut(s) 44, 119, 309, 935, 1230, 1317
HpySE526I ACGT 2 cut(s) 83, 87
Hsp92II CATG 4 cut(s) 350, 601, 788, 1376
HspAI GCGC 1 cut(s) 1381
Ksp22I TGATCA 1 cut(s) 1164
KspAI GTTAAC 1 cut(s) 225
Kzo9I GATC 9 cut(s) 351, 366, 571, 591, 738, 828, 952, 1164, 1325
LguI GCTCTTC 1 cut(s) 1343
LmnI GCTCC 4 cut(s) 544, 978, 1321, 1399
Lsp1109I GCAGC 9 cut(s) 39, 265, 358, 637, 667, 953, 1095, 1123, 1213
LweI GCATC 5 cut(s) 46, 46, 80, 322, 1295
MaeI CTAG 2 cut(s) 560, 1142
MaeII ACGT 2 cut(s) 83, 87
MaeIII GTNAC 3 cut(s) 544, 780, 894
MalI GATC 9 cut(s) 353, 368, 573, 593, 740, 830, 954, 1166, 1327
MboI GATC 9 cut(s) 351, 366, 571, 591, 738, 828, 952, 1164, 1325
MboII GAAGA 9 cut(s) 76, 179, 200, 388, 397, 442, 773, 800, 1360
MflI RGATCY 2 cut(s) 351, 571
MhlI GDGCHC 3 cut(s) 656, 1141, 1355
MluCI AATT 4 cut(s) 261, 451, 887, 919
MlyI GAGTC 1 cut(s) 902
Mph1103I ATGCAT 1 cut(s) 73
MseI TTAA 4 cut(s) 224, 279, 513, 1257
MspA1I CMGCKG 3 cut(s) 256, 473, 680
MspI CCGG 2 cut(s) 92, 228
MspR9I CCNGG 6 cut(s) 93, 179, 229, 976, 1060, 1157
Mva1269I GAATGC 2 cut(s) 73, 989
MvaI CCWGG 4 cut(s) 179, 976, 1060, 1157
MvnI CGCG 3 cut(s) 751, 850, 947
MwoI GCNNNNNNNGC 6 cut(s) 341, 1108, 1136, 1145, 1226, 1363
NciI CCSGG 2 cut(s) 93, 229
NdeI CATATG 1 cut(s) 328
NdeII GATC 9 cut(s) 351, 366, 571, 591, 738, 828, 952, 1164, 1325
NlaIII CATG 4 cut(s) 350, 601, 788, 1376
NlaIV GGNNCC 4 cut(s) 273, 573, 817, 1401
NmeAIII GCCGAG 1 cut(s) 1342
NmuCI GTSAC 3 cut(s) 544, 780, 894
NruI TCGCGA 1 cut(s) 751
NsiI ATGCAT 1 cut(s) 73
NspI RCATGY 1 cut(s) 1376
PaqCI CACCTGC 2 cut(s) 703, 1027
PciI ACATGT 1 cut(s) 1372
PciSI GCTCTTC 1 cut(s) 1343
PctI GAATGC 2 cut(s) 73, 989
PfeI GAWTC 6 cut(s) 238, 460, 499, 713, 914, 1271
Pfl23II CGTACG 1 cut(s) 84
PflMI CCANNNNNTGG 1 cut(s) 587
PfoI TCCNGGA 1 cut(s) 177
PleI GAGTC 1 cut(s) 901
PpsI GAGTC 1 cut(s) 901
Ppu21I YACGTR 1 cut(s) 88
PscI ACATGT 1 cut(s) 1372
Psp124BI GAGCTC 1 cut(s) 1355
Psp6I CCWGG 4 cut(s) 177, 974, 1058, 1155
PspGI CCWGG 4 cut(s) 177, 974, 1058, 1155
PspLI CGTACG 1 cut(s) 84
PspN4I GGNNCC 4 cut(s) 273, 573, 817, 1401
PspPI GGNCC 7 cut(s) 115, 175, 343, 398, 615, 1153, 1159
PsrI GAACNNNNNNTAC 2 cut(s) 428, 460
PstI CTGCAG 1 cut(s) 1113
PstNI CAGNNNCTG 2 cut(s) 587, 1162
PsuI RGATCY 2 cut(s) 351, 571
PvuII CAGCTG 1 cut(s) 256
RruI TCGCGA 1 cut(s) 751
RsaI GTAC 4 cut(s) 86, 90, 106, 1055
RsaNI GTAC 4 cut(s) 85, 89, 105, 1054
SacI GAGCTC 1 cut(s) 1355
SalI GTCGAC 1 cut(s) 563
SapI GCTCTTC 1 cut(s) 1343
SaqAI TTAA 4 cut(s) 224, 279, 513, 1257
Sau3AI GATC 9 cut(s) 351, 366, 571, 591, 738, 828, 952, 1164, 1325
Sau96I GGNCC 7 cut(s) 115, 175, 343, 398, 615, 1153, 1159
SchI GAGTC 1 cut(s) 902
ScrFI CCNGG 6 cut(s) 93, 179, 229, 976, 1060, 1157
SduI GDGCHC 3 cut(s) 656, 1141, 1355
SfaNI GCATC 5 cut(s) 46, 46, 80, 322, 1295
SfcI CTRYAG 3 cut(s) 1109, 1249, 1463
SinI GGWCC 4 cut(s) 175, 398, 615, 1153
SnaBI TACGTA 1 cut(s) 88
SpeI ACTAGT 1 cut(s) 559
Sse9I AATT 4 cut(s) 261, 451, 887, 919
SspI AATATT 1 cut(s) 994
SspMI CTAG 2 cut(s) 560, 1142
SstI GAGCTC 1 cut(s) 1355
StyD4I CCNGG 6 cut(s) 91, 177, 227, 974, 1058, 1155
StyI CCWWGG 1 cut(s) 267
TaaI ACNGT 4 cut(s) 109, 479, 722, 1253
TaiI ACGT 2 cut(s) 86, 90
TaqI TCGA 5 cut(s) 33, 357, 564, 603, 656
TasI AATT 4 cut(s) 261, 451, 887, 919
TauI GCSGC 6 cut(s) 116, 215, 554, 557, 947, 1369
TfiI GAWTC 6 cut(s) 238, 460, 499, 713, 914, 1271
Tru1I TTAA 4 cut(s) 224, 279, 513, 1257
Tru9I TTAA 4 cut(s) 224, 279, 513, 1257
TscAI CASTG 5 cut(s) 169, 592, 1083, 1281, 1303
TseFI GTSAC 3 cut(s) 544, 780, 894
TseI GCWGC 9 cut(s) 27, 253, 371, 625, 680, 941, 1108, 1111, 1226
Tsp45I GTSAC 3 cut(s) 544, 780, 894
TspDTI ATGAA 2 cut(s) 201, 801
TspGWI ACGGA 2 cut(s) 646, 1382
TspRI CASTG 5 cut(s) 169, 592, 1083, 1281, 1303
Van91I CCANNNNNTGG 1 cut(s) 587
VpaK11BI GGWCC 4 cut(s) 175, 398, 615, 1153
XapI RAATTY 1 cut(s) 261
XbaI TCTAGA 1 cut(s) 1141
XceI RCATGY 1 cut(s) 1376
XcmI CCANNNNNNNNNTGG 1 cut(s) 646
XmiI GTMKAC 1 cut(s) 564
XspI CTAG 2 cut(s) 560, 1142
Zsp2I ATGCAT 1 cut(s) 73
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.